https://launchpad.net/ubuntu/+archive/test-rebuild-20191220-focal/+build/18296109 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-033 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:46:18 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_183 python-lpbuildd_183 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 5 Jan 16:42:14 ntpdate[1925]: adjust time server 10.211.37.1 offset 0.018084 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18296109 --image-type chroot /home/buildd/filecache-default/f005b6164729459c78307140747b338a2f357aa2 Creating target for build PACKAGEBUILD-18296109 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18296109 Starting target for build PACKAGEBUILD-18296109 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18296109 'deb http://ftpmaster.internal/ubuntu focal main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-18296109 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18296109 Updating target for build PACKAGEBUILD-18296109 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main armhf Packages [931 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main Translation-en [499 kB] Get:4 http://ftpmaster.internal/ubuntu focal/restricted armhf Packages [7048 B] Get:5 http://ftpmaster.internal/ubuntu focal/restricted Translation-en [5768 B] Get:6 http://ftpmaster.internal/ubuntu focal/universe armhf Packages [8423 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5195 kB] Get:8 http://ftpmaster.internal/ubuntu focal/multiverse armhf Packages [123 kB] Get:9 http://ftpmaster.internal/ubuntu focal/multiverse Translation-en [110 kB] Fetched 15.5 MB in 6s (2668 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libhogweed5 libisl22 libnettle7 libperl5.30 perl-modules-5.30 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-arm-linux-gnueabihf binutils-common bsdutils bzip2 cpp-9 debianutils fdisk g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev lsb-base mount ncurses-base ncurses-bin perl perl-base sensible-utils systemd systemd-sysv sysvinit-utils util-linux 90 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. Need to get 57.8 MB of archives. After this operation, 41.0 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main armhf libc6-dev armhf 2.30-0ubuntu3 [1943 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main armhf libc-dev-bin armhf 2.30-0ubuntu3 [63.6 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main armhf linux-libc-dev armhf 5.3.0-24.26 [1079 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main armhf libisl22 armhf 0.22-2 [460 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main armhf libcc1-0 armhf 9.2.1-21ubuntu1 [41.8 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main armhf binutils-arm-linux-gnueabihf armhf 2.33.1-6ubuntu3 [2102 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main armhf libbinutils armhf 2.33.1-6ubuntu3 [315 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main armhf binutils-common armhf 2.33.1-6ubuntu3 [203 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main armhf binutils armhf 2.33.1-6ubuntu3 [3352 B] Get:10 http://ftpmaster.internal/ubuntu focal/main armhf gcc-9-base armhf 9.2.1-21ubuntu1 [19.0 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main armhf libgcc1 armhf 1:9.2.1-21ubuntu1 [37.4 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main armhf libgomp1 armhf 9.2.1-21ubuntu1 [77.4 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main armhf libatomic1 armhf 9.2.1-21ubuntu1 [7104 B] Get:14 http://ftpmaster.internal/ubuntu focal/main armhf libasan5 armhf 9.2.1-21ubuntu1 [387 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main armhf libubsan1 armhf 9.2.1-21ubuntu1 [118 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main armhf g++-9 armhf 9.2.1-21ubuntu1 [8541 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main armhf libstdc++-9-dev armhf 9.2.1-21ubuntu1 [1777 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main armhf libgcc-9-dev armhf 9.2.1-21ubuntu1 [690 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main armhf gcc-9 armhf 9.2.1-21ubuntu1 [8073 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main armhf cpp-9 armhf 9.2.1-21ubuntu1 [7470 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main armhf libstdc++6 armhf 9.2.1-21ubuntu1 [451 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main armhf libc6 armhf 2.30-0ubuntu3 [2144 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main armhf base-files armhf 11ubuntu2 [59.8 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main armhf debianutils armhf 4.9.1 [84.6 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main armhf bash armhf 5.0-5ubuntu1 [576 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main armhf bsdutils armhf 1:2.34-0.1ubuntu4 [58.4 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main armhf gzip armhf 1.10-0ubuntu4 [91.1 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main armhf hostname armhf 3.23 [10.4 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main armhf ncurses-bin armhf 6.1+20191019-1ubuntu1 [163 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main armhf perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main armhf libperl5.30 armhf 5.30.0-9 [3286 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main armhf perl armhf 5.30.0-9 [224 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main armhf perl-base armhf 5.30.0-9 [1408 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main armhf bzip2 armhf 1.0.8-2 [32.4 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main armhf libbz2-1.0 armhf 1.0.8-2 [31.0 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main armhf libblkid1 armhf 2.34-0.1ubuntu4 [124 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main armhf libuuid1 armhf 2.34-0.1ubuntu4 [19.8 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main armhf libfdisk1 armhf 2.34-0.1ubuntu4 [163 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main armhf libpcre2-8-0 armhf 10.34-7 [172 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main armhf libselinux1 armhf 3.0-1 [60.1 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main armhf libmount1 armhf 2.34-0.1ubuntu4 [135 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main armhf libncurses6 armhf 6.1+20191019-1ubuntu1 [79.7 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main armhf libtinfo6 armhf 6.1+20191019-1ubuntu1 [72.8 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main armhf libncursesw6 armhf 6.1+20191019-1ubuntu1 [106 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main armhf libsmartcols1 armhf 2.34-0.1ubuntu4 [89.1 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main armhf fdisk armhf 2.34-0.1ubuntu4 [109 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main armhf util-linux armhf 2.34-0.1ubuntu4 [959 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main armhf libdebconfclient0 armhf 0.250ubuntu2 [5776 B] Get:49 http://ftpmaster.internal/ubuntu focal/main armhf base-passwd armhf 3.5.47 [46.4 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main armhf libc-bin armhf 2.30-0ubuntu3 [496 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main armhf ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main armhf lsb-base all 11.1.0ubuntu2 [12.1 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main armhf sysvinit-utils armhf 2.96-1ubuntu1 [19.2 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main armhf liblz4-1 armhf 1.9.2-2 [51.7 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main armhf systemd-sysv armhf 244-3ubuntu1 [9364 B] Get:56 http://ftpmaster.internal/ubuntu focal/main armhf libacl1 armhf 2.2.53-5ubuntu1 [15.8 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main armhf libapparmor1 armhf 2.13.3-7ubuntu1 [29.4 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main armhf libaudit-common all 1:2.8.5-2ubuntu5 [4076 B] Get:59 http://ftpmaster.internal/ubuntu focal/main armhf libcap-ng0 armhf 0.7.9-2.1 [9692 B] Get:60 http://ftpmaster.internal/ubuntu focal/main armhf libaudit1 armhf 1:2.8.5-2ubuntu5 [35.9 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main armhf libcap2 armhf 1:2.27-1 [12.7 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main armhf libudev1 armhf 244-3ubuntu1 [68.8 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main armhf libdevmapper1.02.1 armhf 2:1.02.155-2ubuntu7 [118 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main armhf libjson-c4 armhf 0.13.1+dfsg-6 [25.6 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main armhf libcryptsetup12 armhf 2:2.2.2-1ubuntu1 [163 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main armhf libnettle7 armhf 3.5.1+really3.5.1-2 [126 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main armhf libhogweed5 armhf 3.5.1+really3.5.1-2 [127 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main armhf libp11-kit0 armhf 0.23.18.1-2 [166 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main armhf libtasn1-6 armhf 4.15.0-2 [33.0 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main armhf libgnutls30 armhf 3.6.11.1-2 [732 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main armhf libkmod2 armhf 26-3ubuntu1 [37.0 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main armhf libpam0g armhf 1.3.1-5ubuntu4 [49.6 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main armhf libseccomp2 armhf 2.4.2-2ubuntu1 [32.4 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main armhf mount armhf 2.34-0.1ubuntu4 [108 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main armhf systemd armhf 244-3ubuntu1 [3526 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main armhf libsystemd0 armhf 244-3ubuntu1 [239 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main armhf libzstd1 armhf 1.4.4+dfsg-1 [207 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main armhf libapt-pkg5.90 armhf 1.9.5 [772 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main armhf libgcrypt20 armhf 1.8.5-3ubuntu1 [364 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main armhf gpgv armhf 2.2.17-3ubuntu1 [170 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main armhf apt armhf 1.9.5 [1237 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main armhf libpam-modules-bin armhf 1.3.1-5ubuntu4 [33.8 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main armhf libpam-modules armhf 1.3.1-5ubuntu4 [232 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main armhf libattr1 armhf 1:2.4.48-5 [11.5 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main armhf libpam-runtime all 1.3.1-5ubuntu4 [37.3 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main armhf libsepol1 armhf 3.0-1 [220 kB] Get:87 http://ftpmaster.internal/ubuntu focal/main armhf libsemanage-common all 3.0-1 [9880 B] Get:88 http://ftpmaster.internal/ubuntu focal/main armhf libsemanage1 armhf 3.0-1 [73.9 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main armhf sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main armhf libsqlite3-0 armhf 3.30.1-1ubuntu1 [460 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main armhf gpg armhf 2.2.17-3ubuntu1 [421 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main armhf gpgconf armhf 2.2.17-3ubuntu1 [107 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main armhf gpg-agent armhf 2.2.17-3ubuntu1 [195 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main armhf liblockfile-bin armhf 1.16-1.1 [10.5 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main armhf liblockfile1 armhf 1.16-1.1 [5620 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 57.8 MB in 4s (13.5 MB/s) (Reading database ... 12487 files and directories currently installed.) 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RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18296109 armhf focal -c chroot:build-PACKAGEBUILD-18296109 --arch=armhf --dist=focal --nolog gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.dsc Initiating build PACKAGEBUILD-18296109 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:46:18 UTC 2019 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-033.buildd +==============================================================================+ | gatb-core 1.4.1+git20190813.a73b6dd+dfsg-1 (armhf) 05 Jan 2020 16:43 | +==============================================================================+ Package: gatb-core Version: 1.4.1+git20190813.a73b6dd+dfsg-1 Source Version: 1.4.1+git20190813.a73b6dd+dfsg-1 Distribution: focal Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/gatb-core-IeCC7f/gatb-core-1.4.1+git20190813.a73b6dd+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-IeCC7f' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18296109/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-n8Lpuj/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-n8Lpuj/apt_archive ./ InRelease Get:2 copy:/<>/resolver-n8Lpuj/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-n8Lpuj/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-n8Lpuj/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-n8Lpuj/apt_archive ./ Packages [528 B] Fetched 2861 B in 0s (127 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-n8Lpuj/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14395 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 12), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz Filtered Build-Depends: debhelper-compat (= 12), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz dpkg-deb: building package 'sbuild-build-depends-gatb-core-dummy' in '/<>/resolver-F_MAkr/apt_archive/sbuild-build-depends-gatb-core-dummy.deb'. Ign:1 copy:/<>/resolver-F_MAkr/apt_archive ./ InRelease Get:2 copy:/<>/resolver-F_MAkr/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-F_MAkr/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-F_MAkr/apt_archive ./ Sources [266 B] Get:5 copy:/<>/resolver-F_MAkr/apt_archive ./ Packages [587 B] Fetched 2972 B in 0s (134 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install gatb-core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libasn1-8-heimdal libboost-dev libboost1.67-dev libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-9 libcppunit-1.14-0 libcppunit-dev libcroco3 libcurl4 libdatrie1 libdebhelper-perl libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu63 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm9 libltdl7 libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpsl5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsub-override-perl libsz2 libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db po-debconf ucf x11-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff lrzip libboost-doc libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev libboost-contract1.67-dev libboost-coroutine1.67-dev libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-filesystem1.67-dev libboost-graph1.67-dev libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-program-options1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-regex1.67-dev libboost-serialization1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev libcppunit-doc libgd-tools krb5-doc krb5-user libhdf5-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx fonts-liberation libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libasn1-8-heimdal libboost-dev libboost1.67-dev libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-9 libcppunit-1.14-0 libcppunit-dev libcroco3 libcurl4 libdatrie1 libdebhelper-perl libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu63 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm9 libltdl7 libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpsl5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsub-override-perl libsz2 libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db po-debconf sbuild-build-depends-gatb-core-dummy ucf x11-common zlib1g-dev 0 upgraded, 136 newly installed, 0 to remove and 0 not upgraded. Need to get 65.7 MB of archives. After this operation, 354 MB of additional disk space will be used. 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0.176-1.1 [40.9 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main armhf libexpat1 armhf 2.2.9-1 [53.2 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main armhf libfribidi0 armhf 1.0.7-1.1 [21.7 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main armhf libglib2.0-0 armhf 2.63.3-1 [1118 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main armhf libicu63 armhf 63.2-2 [8002 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main armhf libxml2 armhf 2.9.4+dfsg1-8ubuntu1 [554 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main armhf ucf all 3.0038+nmu1 [51.6 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main armhf gettext-base armhf 0.19.8.1-10 [46.2 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main armhf libedit2 armhf 3.1-20191211-1 [71.6 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main armhf libkrb5support0 armhf 1.17-6 [28.5 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main armhf libk5crypto3 armhf 1.17-6 [78.9 kB] Get:22 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libldap-common all 2.4.48+dfsg-1ubuntu3 [17.3 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main armhf libldap-2.4-2 armhf 2.4.48+dfsg-1ubuntu3 [133 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main armhf libnghttp2-14 armhf 1.40.0-1 [68.0 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build1 [49.1 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main armhf libssh-4 armhf 0.9.0-1ubuntu5 [173 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main armhf libcurl4 armhf 7.66.0-1ubuntu1 [201 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main armhf libjsoncpp1 armhf 1.7.4-3 [65.9 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main armhf librhash0 armhf 1.3.9-1 [125 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main armhf libuv1 armhf 1.33.1-2 [68.2 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main armhf cmake armhf 3.15.4-1ubuntu2 [2931 kB] Get:62 http://ftpmaster.internal/ubuntu focal/universe armhf d-shlibs all 0.88 [10.5 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main armhf libtool all 2.4.6-11 [194 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main armhf dh-autoreconf all 19 [16.1 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main armhf libdebhelper-perl all 12.7.1ubuntu1 [52.0 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main armhf libarchive-zip-perl all 1.67-1 [90.4 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main armhf libsub-override-perl all 0.09-2 [9532 B] Get:68 http://ftpmaster.internal/ubuntu focal/main armhf libfile-stripnondeterminism-perl all 1.6.3-1 [16.0 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main armhf dh-strip-nondeterminism all 1.6.3-1 [5224 B] Get:70 http://ftpmaster.internal/ubuntu focal/main armhf dwz armhf 0.13-5 [153 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main armhf libcroco3 armhf 0.6.13-1 [70.5 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main armhf gettext armhf 0.19.8.1-10 [836 kB] Get:73 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libthai-data all 0.1.28-3 [134 kB] Get:104 http://ftpmaster.internal/ubuntu focal/main armhf libdatrie1 armhf 0.2.12-3 [15.2 kB] Get:105 http://ftpmaster.internal/ubuntu focal/main armhf libthai0 armhf 0.1.28-3 [14.7 kB] Get:106 http://ftpmaster.internal/ubuntu focal/main armhf libpango-1.0-0 armhf 1.44.7-1 [143 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main armhf libpangoft2-1.0-0 armhf 1.44.7-1 [28.6 kB] Get:108 http://ftpmaster.internal/ubuntu focal/main armhf libpangocairo-1.0-0 armhf 1.44.7-1 [20.7 kB] Get:109 http://ftpmaster.internal/ubuntu focal/universe armhf libpathplan4 armhf 2.42.2-3 [19.6 kB] Get:110 http://ftpmaster.internal/ubuntu focal/universe armhf libgvc6 armhf 2.42.2-3 [550 kB] Get:111 http://ftpmaster.internal/ubuntu focal/universe armhf libgvpr2 armhf 2.42.2-3 [143 kB] Get:112 http://ftpmaster.internal/ubuntu focal/universe armhf liblab-gamut1 armhf 2.42.2-3 [178 kB] Get:113 http://ftpmaster.internal/ubuntu focal/main armhf x11-common all 1:7.7+19ubuntu12 [22.4 kB] Get:114 http://ftpmaster.internal/ubuntu focal/main armhf libice6 armhf 2:1.0.10-0ubuntu1 [34.1 kB] Get:115 http://ftpmaster.internal/ubuntu focal/main armhf libsm6 armhf 2:1.2.3-1 [14.1 kB] Get:116 http://ftpmaster.internal/ubuntu focal/main armhf libxt6 armhf 1:1.1.5-1 [129 kB] Get:117 http://ftpmaster.internal/ubuntu focal/main armhf libxmu6 armhf 2:1.1.3-0ubuntu1 [38.3 kB] Get:118 http://ftpmaster.internal/ubuntu focal/main armhf libxaw7 armhf 2:1.0.13-1 [141 kB] Get:119 http://ftpmaster.internal/ubuntu focal/universe armhf graphviz armhf 2.42.2-3 [486 kB] Get:120 http://ftpmaster.internal/ubuntu focal/universe armhf hdf5-helpers armhf 1.10.4+repack-10 [14.0 kB] Get:121 http://ftpmaster.internal/ubuntu focal/universe armhf libaec0 armhf 1.0.4-1 [19.4 kB] Get:122 http://ftpmaster.internal/ubuntu focal/main armhf libboost1.67-dev armhf 1.67.0-13ubuntu2 [8365 kB] Get:123 http://ftpmaster.internal/ubuntu focal/main armhf libboost-dev armhf 1.67.0.2 [3540 B] Get:124 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libjpeg-dev armhf 8c-2ubuntu8 [1554 B] Get:134 http://ftpmaster.internal/ubuntu focal/universe armhf libaec-dev armhf 1.0.4-1 [16.7 kB] Get:135 http://ftpmaster.internal/ubuntu focal/universe armhf libhdf5-dev armhf 1.10.4+repack-10 [2491 kB] Get:136 http://ftpmaster.internal/ubuntu focal/main armhf libjsoncpp-dev armhf 1.7.4-3 [77.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 65.7 MB in 8s (7944 kB/s) Selecting previously unselected package libbsd0:armhf. 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Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:armhf (1.17-6) ... Setting up libcroco3:armhf (0.6.13-1) ... Setting up libssh-4:armhf (0.9.0-1ubuntu5) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dh-strip-nondeterminism (1.6.3-1) ... Setting up libgvpr2:armhf (2.42.2-3) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up libx11-6:armhf (2:1.6.8-1) ... Setting up libtiff5:armhf (4.1.0+git191117-1) ... Setting up libfontconfig1:armhf (2.13.1-2ubuntu2) ... Setting up libjpeg8-dev:armhf (8c-2ubuntu8) ... Setting up libsm6:armhf (2:1.2.3-1) ... Setting up libllvm9:armhf (1:9.0.1-2) ... 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Processing triggers for systemd (244-3ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-170-generic arm64 (armv7l) Toolchain package versions: binutils_2.33.1-6ubuntu3 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-21ubuntu1 gcc-9_9.2.1-21ubuntu1 libc6-dev_2.30-0ubuntu3 libstdc++-9-dev_9.2.1-21ubuntu1 libstdc++6_9.2.1-21ubuntu1 linux-libc-dev_5.3.0-24.26 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.5 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11ubuntu2 base-passwd_3.5.47 bash_5.0-5ubuntu1 binutils_2.33.1-6ubuntu3 binutils-arm-linux-gnueabihf_2.33.1-6ubuntu3 binutils-common_2.33.1-6ubuntu3 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu4 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 cmake_3.15.4-1ubuntu2 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libheimbase1-heimdal_7.7.0+dfsg-1 libheimntlm0-heimdal_7.7.0+dfsg-1 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhx509-5-heimdal_7.7.0+dfsg-1 libice6_2:1.0.10-0ubuntu1 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libisl22_0.22-2 libjbig0_2.1-3.1build1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.3-0ubuntu1 libjpeg-turbo8-dev_2.0.3-0ubuntu1 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c4_0.13.1+dfsg-6 libjsoncpp-dev_1.7.4-3 libjsoncpp1_1.7.4-3 libk5crypto3_1.17-6 libkeyutils1_1.6-6ubuntu1 libkmod2_26-3ubuntu1 libkrb5-26-heimdal_7.7.0+dfsg-1 libkrb5-3_1.17-6 libkrb5support0_1.17-6 liblab-gamut1_2.42.2-3 libldap-2.4-2_2.4.48+dfsg-1ubuntu3 libldap-common_2.4.48+dfsg-1ubuntu3 libllvm9_1:9.0.1-2 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 libltdl7_2.4.6-11 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1ubuntu4 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpango-1.0-0_1.44.7-1 libpangocairo-1.0-0_1.44.7-1 libpangoft2-1.0-0_1.44.7-1 libpathplan4_2.42.2-3 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.1-3 libpixman-1-0_0.38.4-0ubuntu1 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libpsl5_0.20.2-2 libreadline8_8.0-3 librhash0_1.3.9-1 libroken18-heimdal_7.7.0+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2ubuntu1 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1ubuntu4 libsqlite3-0_3.30.1-1ubuntu1 libss2_1.45.3-4ubuntu2 libssh-4_0.9.0-1ubuntu5 libssl1.1_1.1.1c-1ubuntu4 libstdc++-9-dev_9.2.1-21ubuntu1 libstdc++6_9.2.1-21ubuntu1 libsub-override-perl_0.09-2 libsystemd0_244-3ubuntu1 libsz2_1.0.4-1 libtasn1-6_4.15.0-2 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-1 libtinfo6_6.1+20191019-1ubuntu1 libtool_2.4.6-11 libubsan1_9.2.1-21ubuntu1 libuchardet0_0.0.6-3 libudev1_244-3ubuntu1 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu4 libuv1_1.33.1-2 libwebp6_0.6.1-2 libwind0-heimdal_7.7.0+dfsg-1 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libxapian30_1.4.12-1 libxau6_1:1.0.9-0ubuntu1 libxaw7_2:1.0.13-1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.3-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxml2_2.9.4+dfsg1-8ubuntu1 libxmu6_2:1.1.3-0ubuntu1 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.3.0-24.26 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17ubuntu3 mount_2.34-0.1ubuntu4 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gatb-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_244-3ubuntu1 systemd-sysv_244-3ubuntu1 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 util-linux_2.34-0.1ubuntu4 x11-common_1:7.7+19ubuntu12 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 zlib1g-dev_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Aug 20 11:06:42 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.dsc dpkg-source: info: extracting gatb-core in gatb-core-1.4.1+git20190813.a73b6dd+dfsg dpkg-source: info: unpacking gatb-core_1.4.1+git20190813.a73b6dd+dfsg.orig.tar.xz dpkg-source: info: unpacking gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_hdf5.patch dpkg-source: info: applying fix_hdf5_includes.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying fix_install_location.patch dpkg-source: info: applying set_soversion.patch dpkg-source: info: applying dynamic_linking_of_tools.patch dpkg-source: info: applying multiarch.patch dpkg-source: info: applying spelling.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18296109 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18296109 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18296109 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package gatb-core dpkg-buildpackage: info: source version 1.4.1+git20190813.a73b6dd+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=gatb-core dh_auto_clean -O--sourcedirectory=gatb-core dh_autoreconf_clean -O--sourcedirectory=gatb-core dh_clean -O--sourcedirectory=gatb-core debian/rules build-arch dh build-arch --sourcedirectory=gatb-core dh_update_autotools_config -a -O--sourcedirectory=gatb-core dh_autoreconf -a -O--sourcedirectory=gatb-core dh_auto_configure -a -O--sourcedirectory=gatb-core cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ../gatb-core -- The C compiler identification is GNU 9.2.1 -- The CXX compiler identification is GNU 9.2.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- CppUnit: found headers (in /usr/include) but not the static library (/usr/include/../lib/libcppunit.a) -- CppUnit FOUND (/usr/include) -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed -- Check size of __uint128_t -- Check size of __uint128_t - failed -- Options: -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4") -- HDF5_LIBRARIES="/usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so/usr/lib/arm-linux-gnueabihf/libpthread.so/usr/lib/arm-linux-gnueabihf/libsz.so/usr/lib/arm-linux-gnueabihf/libz.so/usr/lib/arm-linux-gnueabihf/libdl.so/usr/lib/arm-linux-gnueabihf/libm.so" -- OPTIMIZED KMER SIZES INTERVALS ARE 32 64 96 128 <-- max supported kmer size without recompilation CMake Warning (dev) at CMakeLists.txt:237 (set): Cannot set "gatb-core-klist": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------- GATB TESTS ---------- -- ---------- GATB TOOLS ---------- DYNAMIC BINARIES for dbgh5 DYNAMIC BINARIES for dbginfo DYNAMIC BINARIES for leon -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4") found components: C CMake Warning (dev) at CMakeLists.txt:263 (set): Cannot set "gatb-core-flags": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:264 (set): Cannot set "gatb-core-includes": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:265 (set): Cannot set "gatb-core-libraries": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:266 (set): Cannot set "gatb-core-cmake": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.8.13") found components: doxygen dot -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg' dh_auto_build -a cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core -B/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/depend make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/depend make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/depend make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-dynamic.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/thirdparty /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/thirdparty/CMakeFiles/thirdparty_copy.dir/DependInfo.cmake --color= Scanning dependencies of target thirdparty_copy make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/build make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/json cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty/BooPHF/BooPHF.h /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/ cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty/json/json.hpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/json/ make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' [ 0%] Built target thirdparty_copy Scanning dependencies of target gatbcore-static Scanning dependencies of target gatbcore-dynamic make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/build make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/build make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' [ 1%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o [ 1%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o [ 1%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankAlbum.cpp cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankAlbum.cpp cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 2%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 54 | fread (&value, sizeof(value), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 453 | fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 54 | fread (&value, sizeof(value), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 453 | fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp: In function ‘long unsigned int gatb::core::debruijn::impl::logging(std::string)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:67: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 31 | snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 32 | mem, memMaxProcess); | ~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:73: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 31 | snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 32 | mem, memMaxProcess); | ~~~~~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} [ 9%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp: In function ‘long unsigned int gatb::core::debruijn::impl::logging(std::string)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:67: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 31 | snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 32 | mem, memMaxProcess); | ~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:73: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 31 | snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 32 | mem, memMaxProcess); | ~~~~~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 14%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 14%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 15%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_marked_branching(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_marked(Edge&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_marked_branching(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_marked(Edge&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u [ 18%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 [ 18%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Configuration.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Configuration.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function ‘void gatb::core::kmer::impl::Repartitor::printInfo()’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:307:41: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 307 | printf("Repartitor : nbMinimizers=%ld\n", _nb_minims); | ~~^ ~~~~~~~~~~ | | | | | u_int64_t {aka long long unsigned int} | long int | %lld /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:71: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 308 | for (u_int64_t ii=0; ii<_nb_minims; ii++ ) { printf(" table[%ld] = %d \n",ii,_repart_table[ii]); } | ~~^ ~~ | | | | long int u_int64_t {aka long long unsigned int} | %lld In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1920 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1921 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.cpp [ 29%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 29%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor ‘gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable] 51 | int ret = pthread_attr_init ( &tattr ) ; | ^~~ [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:71, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void AbstractHeaderCoder::addFieldColumn()’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘void DnaDecoder::decodeAnchorRead()’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void DnaEncoder::buildKmers()’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 34%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/ModelData.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.hpp:26, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp /usr/include/c++/9/bits/vector.tcc: In constructor ‘Order0Model::Order0Model(int)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp [ 34%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp [ 35%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.cpp [ 35%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function ‘void gatb::core::kmer::impl::Repartitor::printInfo()’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:307:41: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 307 | printf("Repartitor : nbMinimizers=%ld\n", _nb_minims); | ~~^ ~~~~~~~~~~ | | | | | u_int64_t {aka long long unsigned int} | long int | %lld /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:71: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 308 | for (u_int64_t ii=0; ii<_nb_minims; ii++ ) { printf(" table[%ld] = %d \n",ii,_repart_table[ii]); } | ~~^ ~~ | | | | long int u_int64_t {aka long long unsigned int} | %lld [ 36%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1920 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1921 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 37%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 37%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:62: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:68: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~~~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:74: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~~~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:42: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘int64_t’ {aka ‘long long int’} [-Wformat=] 438 | snprintf (buffer, sizeof(buffer), "%ld", value); | ~~^ ~~~~~ | | | | | int64_t {aka long long int} | long int | %lld [ 39%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void Leon::decodeAnchorDict()’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void Leon::startDecompression_setup()’: /usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 957 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 957 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor ‘gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable] 51 | int ret = pthread_attr_init ( &tattr ) ; | ^~~ [ 43%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)’: /usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 957 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] 205 | return bin2ntTab[nt]; | ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:194:20: note: while referencing ‘Leon::bin2ntTab’ 194 | static const int bin2ntTab[5]; | ^~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void DnaEncoder::buildKmers()’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:796:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool) [with unsigned int SPAN = 128; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 47%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void AbstractHeaderCoder::addFieldColumn()’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 47%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:796:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool) [with unsigned int SPAN = 32; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:796:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool) [with unsigned int SPAN = 64; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:71, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘boomphf::mphf::mphf(size_t, const Range&, int, double, bool, float) [with Range = std::vector; elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:783:3: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 783 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, std::vector&, const std::vector >&, int, bool) [with int SPAN = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 402 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘boomphf::mphf::mphf(size_t, const Range&, int, double, bool, float) [with Range = std::vector; elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:783:3: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 783 | } | ^ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, std::vector&, const std::vector >&, int, bool) [with int SPAN = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 402 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘boomphf::mphf::mphf(size_t, const Range&, int, double, bool, float) [with Range = std::vector; elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:783:3: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 783 | } | ^ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, std::vector&, const std::vector >&, int, bool) [with int SPAN = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 402 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::write_final_output(const string&, bool, gatb::core::bank::impl::BankFasta*, uint64_t&, bool)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void Leon::decodeAnchorDict()’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void Leon::startDecompression_setup()’: /usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 957 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 957 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::write_final_output(const string&, bool, gatb::core::bank::impl::BankFasta*, uint64_t&, bool)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.hpp:26, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp:21: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In constructor ‘Order0Model::Order0Model(int)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::write_final_output(const string&, bool, gatb::core::bank::impl::BankFasta*, uint64_t&, bool)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.cpp [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:796:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool) [with unsigned int SPAN = 96; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 128; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:112:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 112 | for (int np = 0; np < _nbpart; np++) { | ~~~^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:116:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 116 | for (int ii = 0; ii < _num_mm_bins; ii++) { | ~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo::parti_record& gatb::core::kmer::impl::PartiInfo::parti_record::operator+=(const gatb::core::kmer::impl::PartiInfo::parti_record&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:113:32: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 128; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:66:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 66 | for(int i = 0 ; i < xmer * 256 ; i++) { | ~~^~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 117 | for(int ii=0; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 120 | for(int jj=0; jj<= _histogram->getLength2(); jj++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 135 | for(int ii=1; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 32; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:112:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 112 | for (int np = 0; np < _nbpart; np++) { | ~~~^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:116:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 116 | for (int ii = 0; ii < _num_mm_bins; ii++) { | ~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo::parti_record& gatb::core::kmer::impl::PartiInfo::parti_record::operator+=(const gatb::core::kmer::impl::PartiInfo::parti_record&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:113:32: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 32; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:66:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 66 | for(int i = 0 ; i < xmer * 256 ; i++) { | ~~^~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 117 | for(int ii=0; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 120 | for(int jj=0; jj<= _histogram->getLength2(); jj++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 135 | for(int ii=1; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:62: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:68: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~~~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:74: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 350 | snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", | ~~~^ | | | long unsigned int | %4llu 351 | _cpuinfo->getUsage(), 352 | mem, _memMax, memMaxProcess | ~~~~~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:42: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘int64_t’ {aka ‘long long int’} [-Wformat=] 438 | snprintf (buffer, sizeof(buffer), "%ld", value); | ~~^ ~~~~~ | | | | | int64_t {aka long long int} | long int | %lld /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘boomphf::mphf::mphf(size_t, const Range&, int, double, bool, float) [with Range = std::vector; elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:783:3: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 783 | } | ^ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, std::vector&, const std::vector >&, int, bool) [with int SPAN = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 402 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Tool.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]::ptcfcomp]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]::ptcfcomp]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::write_final_output(const string&, bool, gatb::core::bank::impl::BankFasta*, uint64_t&, bool)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)’: /usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 957 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 64; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:112:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 112 | for (int np = 0; np < _nbpart; np++) { | ~~~^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:116:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 116 | for (int ii = 0; ii < _num_mm_bins; ii++) { | ~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo::parti_record& gatb::core::kmer::impl::PartiInfo::parti_record::operator+=(const gatb::core::kmer::impl::PartiInfo::parti_record&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:113:32: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 64; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:66:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 66 | for(int i = 0 ; i < xmer * 256 ; i++) { | ~~^~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 117 | for(int ii=0; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 120 | for(int jj=0; jj<= _histogram->getLength2(); jj++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 135 | for(int ii=1; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 96; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:112:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 112 | for (int np = 0; np < _nbpart; np++) { | ~~~^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:116:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 116 | for (int ii = 0; ii < _num_mm_bins; ii++) { | ~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo::parti_record& gatb::core::kmer::impl::PartiInfo::parti_record::operator+=(const gatb::core::kmer::impl::PartiInfo::parti_record&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:113:32: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 96; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:66:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 66 | for(int i = 0 ; i < xmer * 256 ; i++) { | ~~^~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 117 | for(int ii=0; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 120 | for(int jj=0; jj<= _histogram->getLength2(); jj++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 135 | for(int ii=1; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]::ptcfcomp]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2246 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<4>]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]::ptcfcomp]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:796:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool) [with unsigned int SPAN = 128; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:316:21: warning: unused variable ‘abundance’ [-Wunused-variable] 316 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2246 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<2>]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<64>::Count, gatb::core::tools::math::LargeInt<2> >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘boomphf::mphf::mphf(size_t, const Range&, int, double, bool, float) [with Range = std::vector; elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:783:3: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 783 | } | ^ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, std::vector&, const std::vector >&, int, bool) [with int SPAN = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 402 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:316:21: warning: unused variable ‘abundance’ [-Wunused-variable] 316 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2246 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<3>]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:316:21: warning: unused variable ‘abundance’ [-Wunused-variable] 316 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp [ 63%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 63%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:316:21: warning: unused variable ‘abundance’ [-Wunused-variable] 316 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::write_final_output(const string&, bool, gatb::core::bank::impl::BankFasta*, uint64_t&, bool)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 63%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:796:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool) [with unsigned int SPAN = 32; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘boomphf::mphf::mphf(size_t, const Range&, int, double, bool, float) [with Range = std::vector; elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:783:3: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 783 | } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, std::vector&, const std::vector >&, int, bool) [with int SPAN = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 402 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::write_final_output(const string&, bool, gatb::core::bank::impl::BankFasta*, uint64_t&, bool)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 [ 64%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:796:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool) [with unsigned int SPAN = 64; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘boomphf::mphf::mphf(size_t, const Range&, int, double, bool, float) [with Range = std::vector; elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:783:3: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 783 | } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, std::vector&, const std::vector >&, int, bool) [with int SPAN = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 402 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::write_final_output(const string&, bool, gatb::core::bank::impl::BankFasta*, uint64_t&, bool)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u [ 65%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:796:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool) [with unsigned int SPAN = 96; std::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:28: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~^ | | | long unsigned int | %12u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 841 | printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ | | | | | long unsigned int | std::unordered_map, std::equal_to, std::allocator > >::size_type {aka unsigned int} | %u 842 | _final_hash.size()*42*8, 100*(float)(_final_hash.size()*42*8)/totalsize, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 | _final_hash.size() ); | ~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::allocator > > > >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘boomphf::mphf::mphf(size_t, const Range&, int, double, bool, float) [with Range = std::vector; elem_t = unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:783:3: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 783 | } | ^ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, std::vector&, const std::vector >&, int, bool) [with int SPAN = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 402 | } | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:402:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In lambda function: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In lambda function: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::write_final_output(const string&, bool, gatb::core::bank::impl::BankFasta*, uint64_t&, bool)’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 128; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:112:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 112 | for (int np = 0; np < _nbpart; np++) { | ~~~^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:116:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 116 | for (int ii = 0; ii < _num_mm_bins; ii++) { | ~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo::parti_record& gatb::core::kmer::impl::PartiInfo::parti_record::operator+=(const gatb::core::kmer::impl::PartiInfo::parti_record&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:113:32: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 128; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:66:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 66 | for(int i = 0 ; i < xmer * 256 ; i++) { | ~~^~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 117 | for(int ii=0; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 120 | for(int jj=0; jj<= _histogram->getLength2(); jj++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 135 | for(int ii=1; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]::ptcfcomp]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1920 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1921 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 128]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 32; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:112:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 112 | for (int np = 0; np < _nbpart; np++) { | ~~~^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:116:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 116 | for (int ii = 0; ii < _num_mm_bins; ii++) { | ~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo::parti_record& gatb::core::kmer::impl::PartiInfo::parti_record::operator+=(const gatb::core::kmer::impl::PartiInfo::parti_record&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:113:32: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 32; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:66:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 66 | for(int i = 0 ; i < xmer * 256 ; i++) { | ~~^~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 117 | for(int ii=0; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 120 | for(int jj=0; jj<= _histogram->getLength2(); jj++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 135 | for(int ii=1; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 64; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:112:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 112 | for (int np = 0; np < _nbpart; np++) { | ~~~^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:116:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 116 | for (int ii = 0; ii < _num_mm_bins; ii++) { | ~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo::parti_record& gatb::core::kmer::impl::PartiInfo::parti_record::operator+=(const gatb::core::kmer::impl::PartiInfo::parti_record&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:113:32: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 64; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:66:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 66 | for(int i = 0 ; i < xmer * 256 ; i++) { | ~~^~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 117 | for(int ii=0; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 120 | for(int jj=0; jj<= _histogram->getLength2(); jj++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 135 | for(int ii=1; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]::ptcfcomp]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 32]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]::ptcfcomp]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 64]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 70%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 563 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 587 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 599 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 708 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 715 | for(int ii=0; ii< _tmpCountFileNames.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 239 | while(filenames.size() > _reduceTarget) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 257 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 265 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 271 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 335 | for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 342 | for(int ii=0; ii< currentFiles.size(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 96; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:112:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 112 | for (int np = 0; np < _nbpart; np++) { | ~~~^~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:116:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 116 | for (int ii = 0; ii < _num_mm_bins; ii++) { | ~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp: In instantiation of ‘gatb::core::kmer::impl::PartiInfo::parti_record& gatb::core::kmer::impl::PartiInfo::parti_record::operator+=(const gatb::core::kmer::impl::PartiInfo::parti_record&) [with unsigned int xmer = 5]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:113:32: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:130:16: required from ‘gatb::core::kmer::impl::PartiInfo& gatb::core::kmer::impl::PartiInfo::add_sync(const gatb::core::kmer::impl::PartiInfo&) [with unsigned int xmer = 5]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1151:26: required from ‘gatb::core::kmer::impl::FillPartitions::~FillPartitions() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1242:5: required from ‘void gatb::core::kmer::impl::SortingCountAlgorithm::fillPartitions(size_t, gatb::core::tools::dp::Iterator*, gatb::core::kmer::impl::PartiInfo<5>&) [with unsigned int span = 96; size_t = unsigned int]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:12:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:66:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 66 | for(int i = 0 ; i < xmer * 256 ; i++) { | ~~^~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 117 | for(int ii=0; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 120 | for(int jj=0; jj<= _histogram->getLength2(); jj++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 135 | for(int ii=1; ii<= _histogram->getLength(); ii++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 70%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]::ptcfcomp]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::ptcfcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2246 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<4>]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 128 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::kxpcomp>]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 96]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 70%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 71%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here 44 | class NativeInt8 : private misc::ArrayData | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2246 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<2>]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<64>::Count, gatb::core::tools::math::LargeInt<2> >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:316:21: warning: unused variable ‘abundance’ [-Wunused-variable] 316 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2246 | binary_search(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:2246:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<3>]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 69 | return std::binary_search (_items.begin(), _items.end(), item); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 137 | if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:316:21: warning: unused variable ‘abundance’ [-Wunused-variable] 316 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp [ 73%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:316:21: warning: unused variable ‘abundance’ [-Wunused-variable] 316 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:316:21: warning: unused variable ‘abundance’ [-Wunused-variable] 316 | Abundance_t abundance = (*_abundanceMap)[count.value]; | ^~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 [ 76%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 79%] Linking CXX static library ../lib/None/libgatbcore.a cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -P CMakeFiles/gatbcore-static.dir/cmake_clean_target.cmake cd 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CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/bin/ranlib ../lib/None/libgatbcore.a In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' [ 79%] Built target gatbcore-static make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/depend make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit/CMakeFiles/gatb-core-cppunit.dir/DependInfo.cmake --color= Scanning dependencies of target gatb-core-cppunit make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/build make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' [ 79%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function ‘void gatb::tests::TestBank::bank_checkSample1_aux(const string&, gatb::core::bank::impl::BankFasta::Iterator::CommentMode_e)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:118:53: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 118 | snprintf (buffer, sizeof(buffer), "seq%ld%s", i+1, (mode == BankFasta::Iterator::FULL ? " generic" : "")); | ~~^ ~~~ | | | | | size_t {aka unsigned int} | long int | %d /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function ‘void gatb::tests::TestBank::bank_checkSample2_aux(const string&)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:187:53: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 187 | snprintf (buffer, sizeof(buffer), "seq%ld", nbSeq+1); | ~~^ ~~~~~~~ | | | | long int size_t {aka unsigned int} | %d /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function ‘void gatb::tests::TestBank::bank_perf1()’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:678:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] 678 | printf ("size=%ld time=%ld => rate=%.3f MB/s \n", | ~~^ | | | long int | %lld 679 | totalSize, t1-t0, | ~~~~~~~~~ | | | u_int64_t {aka long long unsigned int} /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:678:35: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘gatb::core::system::ITime::Value’ {aka ‘long long unsigned int’} [-Wformat=] 678 | printf ("size=%ld time=%ld => rate=%.3f MB/s \n", | ~~^ | | | long int | %lld 679 | totalSize, t1-t0, | ~~~~~ | | | gatb::core::system::ITime::Value {aka long long unsigned int} In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestLeon.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestLeon.cpp:32: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bank/TestSequence.cpp In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/bcalm/TestBcalm.cpp [ 81%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp [ 82%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp:33: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 82%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 82%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 82%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u [ 83%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp:33: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ [ 83%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp [ 84%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp:33: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type {aka unsigned int} | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:26: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] 714 | if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | long unsigned int | std::set > >, std::less > > >, std::allocator > > > >::size_type {aka unsigned int} | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 966 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h:966:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp:33: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algo.h: In member function ‘bool gatb::core::debruijn::impl::BranchingTerminatorTemplate::is_indexed(Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algo.h:2257:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 2257 | = std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2258 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_algobase.h:1013:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 1013 | return std::__lower_bound(__first, __last, __val, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1014 | __gnu_cxx::__ops::__iter_less_val()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 85%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestDSK.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestKmer.cpp In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1920 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1921 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestKmerBank.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestMPHF.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/kmer/TestMPHF.cpp:27: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/main.cpp [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/system/TestSystem.cpp [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/collections/TestBag.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 [ 89%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here 1568 | struct Count : tools::misc::Abundance | ^~~~~ [ 90%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/collections/TestContainer.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/collections/TestIterable.cpp [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/collections/TestMap.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/collections/TestMap.cpp:24: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 128]’: /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/designpattern/TestIterators.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 92%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/math/TestMath.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 664 | typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const | ^~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 480 | return execute (encoding, Functor_codeSeed(seq, startIndex)); | ^ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:90: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 1849 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1850 | _H1, _H2, _Hash, _RehashPolicy, _Traits>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/hashtable.h:1849:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 32]’: /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 2935 | std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 [ 93%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/misc/TestMisc.cpp In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp [ 93%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /usr/include/c++/9/unordered_map:46, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/9/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ /usr/include/c++/9/bits/hashtable.h:768:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 768 | { return erase(const_iterator(__it)); } | ^ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u [ 94%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:23: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] 436 | memset (_data, 0, _blockSize*sizeof(Item)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:31: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here 48 | class NativeInt64 | ^~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::string*, std::vector*) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 326 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 243 | __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~ /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/bits/stl_algo.h:61, from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 408 | std::__pop_heap(__first, __last, __last, __comp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1671:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1671 | std::__make_heap(__first, __middle, __comp); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1820 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 64]’: /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/9/vector:72, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Linking CXX executable ../../bin/None/gatb-core-cppunit cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatb-core-cppunit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -o ../../bin/None/gatb-core-cppunit -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so /usr/lib/arm-linux-gnueabihf/libpthread.so /usr/lib/arm-linux-gnueabihf/libsz.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libdl.so /usr/lib/arm-linux-gnueabihf/libm.so /usr/lib/arm-linux-gnueabihf/libcppunit.so In file included from /usr/include/c++/9/vector:67, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/9/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::load_unitigs(std::string) [with unsigned int span = 96]’: /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 1662 | _M_range_insert(__pos, __first, __last, | ^~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 [ 95%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 95%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 96%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 96%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp make -f tools/CMakeFiles/dbginfo.dir/build.make tools/CMakeFiles/dbginfo.dir/depend make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/tools /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/tools /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/tools/CMakeFiles/dbginfo.dir/DependInfo.cmake --color= Scanning dependencies of target dbginfo make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make -f tools/CMakeFiles/dbginfo.dir/build.make tools/CMakeFiles/dbginfo.dir/build make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' [ 97%] Building CXX object tools/CMakeFiles/dbginfo.dir/dbginfo.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/tools && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/dbginfo.dir/dbginfo.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/tools/dbginfo.cpp make -f tools/CMakeFiles/dbgh5.dir/build.make tools/CMakeFiles/dbgh5.dir/depend make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/tools /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/tools /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/tools/CMakeFiles/dbgh5.dir/DependInfo.cmake --color= Scanning dependencies of target dbgh5 make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make -f tools/CMakeFiles/dbgh5.dir/build.make tools/CMakeFiles/dbgh5.dir/build make[4]: Entering directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' [ 98%] Building CXX object tools/CMakeFiles/dbgh5.dir/dbgh5.cpp.o cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/tools && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/dbgh5.dir/dbgh5.cpp.o -c /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/tools/dbgh5.cpp In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/tools/dbginfo.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u In file included from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/tools/dbgh5.cpp:20: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:32: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] 545 | printf("rank array : size %lu \n",_ranks.size()); | ~~^ ~~~~~~~~~~~~~ | | | | | std::vector::size_type {aka unsigned int} | long unsigned int | %u /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/tools/dbgh5.cpp: In function ‘void sendEmail(gatb::core::tools::misc::IProperties*, gatb::core::tools::misc::IProperties*)’: /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/gatb-core/tools/dbgh5.cpp:127:13: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 127 | ::system (cmd.str().c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 98%] Linking CXX executable ../bin/None/dbginfo cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbginfo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now CMakeFiles/dbginfo.dir/dbginfo.cpp.o -o ../bin/None/dbginfo -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so /usr/lib/arm-linux-gnueabihf/libpthread.so /usr/lib/arm-linux-gnueabihf/libsz.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libdl.so /usr/lib/arm-linux-gnueabihf/libm.so /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x368): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x520): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x24): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x364): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization8.cpp.in_32.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization8.cpp.in_32.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_32.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_32.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x368): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x520): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x24): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x364): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xbf0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xbf0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x54): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x54): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xda0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xda0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x5c): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x5c): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xf58): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xf58): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x68): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x68): first defined here collect2: error: ld returned 1 exit status make[4]: *** [test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make:440: bin/None/gatb-core-cppunit] Error 1 make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:318: test/unit/CMakeFiles/gatb-core-cppunit.dir/all] Error 2 make[3]: *** Waiting for unfinished jobs.... [ 98%] Linking CXX executable ../bin/None/dbgh5 cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbgh5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now CMakeFiles/dbgh5.dir/dbgh5.cpp.o -o ../bin/None/dbgh5 -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so /usr/lib/arm-linux-gnueabihf/libpthread.so /usr/lib/arm-linux-gnueabihf/libsz.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libdl.so /usr/lib/arm-linux-gnueabihf/libm.so [ 98%] Linking CXX shared library ../lib/None/libgatbcore.so cd /<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E 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CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [tools/CMakeFiles/dbginfo.dir/build.make:94: bin/None/dbginfo] Error 1 make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:562: tools/CMakeFiles/dbginfo.dir/all] Error 2 /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [tools/CMakeFiles/dbgh5.dir/build.make:94: bin/None/dbgh5] Error 1 make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:594: tools/CMakeFiles/dbgh5.dir/all] Error 2 /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > 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CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o:(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [src/CMakeFiles/gatbcore-dynamic.dir/build.make:1602: lib/None/libgatbcore.so.2] Error 1 make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:187: src/CMakeFiles/gatbcore-dynamic.dir/all] Error 2 make[3]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' make[2]: *** [Makefile:155: all] Error 2 make[2]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg/obj-arm-linux-gnueabihf' dh_auto_build: cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" returned exit code 2 make[1]: *** [debian/rules:13: override_dh_auto_build-arch] Error 255 make[1]: Leaving directory '/<>/gatb-core-1.4.1+git20190813.a73b6dd+dfsg' make: *** [debian/rules:10: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20200105-1714 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 1450116 Build-Time: 1858 Distribution: focal Fail-Stage: build Host Architecture: armhf Install-Time: 47 Job: gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.dsc Machine Architecture: arm64 Package: gatb-core Package-Time: 1907 Source-Version: 1.4.1+git20190813.a73b6dd+dfsg-1 Space: 1450116 Status: attempted Version: 1.4.1+git20190813.a73b6dd+dfsg-1 -------------------------------------------------------------------------------- Finished at 20200105-1714 Build needed 00:31:47, 1450116k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18296109 Scanning for processes to kill in build PACKAGEBUILD-18296109