https://launchpad.net/ubuntu/+archive/test-rebuild-20191220-focal/+build/18320142 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-s390x-014 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:44:14 UTC 2019 s390x Buildd toolchain package versions: launchpad-buildd_183 python-lpbuildd_183 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 5 Jan 12:05:05 ntpdate[1846]: adjust time server 10.211.37.1 offset 0.003147 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=s390x PACKAGEBUILD-18320142 --image-type chroot /home/buildd/filecache-default/1ac0229cc48d8f596a1790116aa52d00551197b1 Creating target for build PACKAGEBUILD-18320142 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=s390x PACKAGEBUILD-18320142 Starting target for build PACKAGEBUILD-18320142 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=s390x PACKAGEBUILD-18320142 'deb http://ftpmaster.internal/ubuntu focal main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-18320142 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=s390x PACKAGEBUILD-18320142 Updating target for build PACKAGEBUILD-18320142 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main s390x Packages [916 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main Translation-en [499 kB] Get:4 http://ftpmaster.internal/ubuntu focal/restricted s390x Packages [1288 B] Get:5 http://ftpmaster.internal/ubuntu focal/restricted Translation-en [5768 B] Get:6 http://ftpmaster.internal/ubuntu focal/universe s390x Packages [8337 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5195 kB] Get:8 http://ftpmaster.internal/ubuntu focal/multiverse s390x Packages [119 kB] Get:9 http://ftpmaster.internal/ubuntu focal/multiverse Translation-en [110 kB] Fetched 15.4 MB in 3s (4980 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libhogweed5 libisl22 libnettle7 libperl5.30 perl-modules-5.30 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-common binutils-s390x-linux-gnu bsdutils bzip2 cpp-9 debianutils fdisk g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libitm1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev lsb-base mount ncurses-base ncurses-bin perl perl-base sensible-utils systemd systemd-sysv sysvinit-utils util-linux 91 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. Need to get 58.1 MB of archives. After this operation, 49.1 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main s390x libc6-dev s390x 2.30-0ubuntu3 [2060 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main s390x libc-dev-bin s390x 2.30-0ubuntu3 [63.9 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main s390x linux-libc-dev s390x 5.3.0-24.26 [1094 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main s390x libisl22 s390x 0.22-2 [546 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main s390x libcc1-0 s390x 9.2.1-21ubuntu1 [46.5 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main s390x binutils-s390x-linux-gnu s390x 2.33.1-6ubuntu3 [1468 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main s390x libbinutils s390x 2.33.1-6ubuntu3 [301 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main s390x binutils-common s390x 2.33.1-6ubuntu3 [203 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main s390x binutils s390x 2.33.1-6ubuntu3 [3328 B] Get:10 http://ftpmaster.internal/ubuntu focal/main s390x gcc-9-base s390x 9.2.1-21ubuntu1 [19.1 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main s390x libgcc1 s390x 1:9.2.1-21ubuntu1 [25.3 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main s390x libgomp1 s390x 9.2.1-21ubuntu1 [83.3 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main s390x libitm1 s390x 9.2.1-21ubuntu1 [27.1 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main s390x libatomic1 s390x 9.2.1-21ubuntu1 [8264 B] Get:15 http://ftpmaster.internal/ubuntu focal/main s390x libasan5 s390x 9.2.1-21ubuntu1 [361 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main s390x libubsan1 s390x 9.2.1-21ubuntu1 [125 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main s390x g++-9 s390x 9.2.1-21ubuntu1 [8609 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main s390x libstdc++-9-dev s390x 9.2.1-21ubuntu1 [1673 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main s390x libgcc-9-dev s390x 9.2.1-21ubuntu1 [704 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main s390x gcc-9 s390x 9.2.1-21ubuntu1 [8095 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main s390x cpp-9 s390x 9.2.1-21ubuntu1 [7454 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main s390x libstdc++6 s390x 9.2.1-21ubuntu1 [504 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main s390x libc6 s390x 2.30-0ubuntu3 [2289 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main s390x base-files s390x 11ubuntu2 [60.0 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main s390x debianutils s390x 4.9.1 [85.7 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main s390x bash s390x 5.0-5ubuntu1 [622 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main s390x bsdutils s390x 1:2.34-0.1ubuntu4 [61.5 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main s390x gzip s390x 1.10-0ubuntu4 [95.8 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main s390x hostname s390x 3.23 [11.1 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main s390x ncurses-bin s390x 6.1+20191019-1ubuntu1 [169 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main s390x perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main s390x libperl5.30 s390x 5.30.0-9 [3782 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main s390x perl s390x 5.30.0-9 [224 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main s390x perl-base s390x 5.30.0-9 [1423 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main s390x bzip2 s390x 1.0.8-2 [33.3 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main s390x libbz2-1.0 s390x 1.0.8-2 [32.6 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main s390x libblkid1 s390x 2.34-0.1ubuntu4 [128 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main s390x libuuid1 s390x 2.34-0.1ubuntu4 [20.5 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main s390x libfdisk1 s390x 2.34-0.1ubuntu4 [160 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main s390x libpcre2-8-0 s390x 10.34-7 [109 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main s390x libselinux1 s390x 3.0-1 [65.6 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main s390x libmount1 s390x 2.34-0.1ubuntu4 [137 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main s390x libncurses6 s390x 6.1+20191019-1ubuntu1 [94.7 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main s390x libtinfo6 s390x 6.1+20191019-1ubuntu1 [83.6 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main s390x libncursesw6 s390x 6.1+20191019-1ubuntu1 [122 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main s390x libsmartcols1 s390x 2.34-0.1ubuntu4 [93.6 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main s390x fdisk s390x 2.34-0.1ubuntu4 [113 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main s390x util-linux s390x 2.34-0.1ubuntu4 [981 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main s390x libdebconfclient0 s390x 0.250ubuntu2 [6152 B] Get:50 http://ftpmaster.internal/ubuntu focal/main s390x base-passwd s390x 3.5.47 [46.7 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main s390x libc-bin s390x 2.30-0ubuntu3 [547 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main s390x ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main s390x lsb-base all 11.1.0ubuntu2 [12.1 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main s390x sysvinit-utils s390x 2.96-1ubuntu1 [20.6 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main s390x liblz4-1 s390x 1.9.2-2 [53.8 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main s390x systemd-sysv s390x 244-3ubuntu1 [9364 B] Get:57 http://ftpmaster.internal/ubuntu focal/main s390x libacl1 s390x 2.2.53-5ubuntu1 [18.3 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main s390x libapparmor1 s390x 2.13.3-7ubuntu1 [33.0 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main s390x libaudit-common all 1:2.8.5-2ubuntu5 [4076 B] Get:60 http://ftpmaster.internal/ubuntu focal/main s390x libcap-ng0 s390x 0.7.9-2.1 [10.8 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main s390x libaudit1 s390x 1:2.8.5-2ubuntu5 [37.3 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main s390x libcap2 s390x 1:2.27-1 [14.2 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main s390x libudev1 s390x 244-3ubuntu1 [71.8 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main s390x libdevmapper1.02.1 s390x 2:1.02.155-2ubuntu7 [122 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main s390x libjson-c4 s390x 0.13.1+dfsg-6 [27.9 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main s390x libcryptsetup12 s390x 2:2.2.2-1ubuntu1 [160 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main s390x libnettle7 s390x 3.5.1+really3.5.1-2 [124 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main s390x libhogweed5 s390x 3.5.1+really3.5.1-2 [136 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main s390x libp11-kit0 s390x 0.23.18.1-2 [172 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main s390x libtasn1-6 s390x 4.15.0-2 [36.9 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main s390x libgnutls30 s390x 3.6.11.1-2 [684 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main s390x libkmod2 s390x 26-3ubuntu1 [40.0 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main s390x libpam0g s390x 1.3.1-5ubuntu4 [52.9 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main s390x libseccomp2 s390x 2.4.2-2ubuntu1 [38.6 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main s390x mount s390x 2.34-0.1ubuntu4 [110 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main s390x systemd s390x 244-3ubuntu1 [3325 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main s390x libsystemd0 s390x 244-3ubuntu1 [239 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main s390x libzstd1 s390x 1.4.4+dfsg-1 [217 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main s390x libapt-pkg5.90 s390x 1.9.5 [789 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main s390x libgcrypt20 s390x 1.8.5-3ubuntu1 [349 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main s390x gpgv s390x 2.2.17-3ubuntu1 [186 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main s390x apt s390x 1.9.5 [1242 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main s390x libpam-modules-bin s390x 1.3.1-5ubuntu4 [36.5 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main s390x libpam-modules s390x 1.3.1-5ubuntu4 [242 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main s390x libattr1 s390x 1:2.4.48-5 [12.4 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main s390x libpam-runtime all 1.3.1-5ubuntu4 [37.3 kB] Get:87 http://ftpmaster.internal/ubuntu focal/main s390x libsepol1 s390x 3.0-1 [227 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main s390x libsemanage-common all 3.0-1 [9880 B] Get:89 http://ftpmaster.internal/ubuntu focal/main s390x libsemanage1 s390x 3.0-1 [80.3 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main s390x sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main s390x libsqlite3-0 s390x 3.30.1-1ubuntu1 [504 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main s390x gpg s390x 2.2.17-3ubuntu1 [442 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main s390x gpgconf s390x 2.2.17-3ubuntu1 [119 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main s390x gpg-agent s390x 2.2.17-3ubuntu1 [217 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main s390x liblockfile-bin s390x 1.16-1.1 [11.4 kB] Get:96 http://ftpmaster.internal/ubuntu focal/main s390x liblockfile1 s390x 1.16-1.1 [6476 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 58.1 MB in 1s (78.8 MB/s) (Reading database ... 12530 files and directories currently installed.) Preparing to unpack .../0-libc6-dev_2.30-0ubuntu3_s390x.deb ... Unpacking libc6-dev:s390x (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Preparing to unpack .../1-libc-dev-bin_2.30-0ubuntu3_s390x.deb ... Unpacking libc-dev-bin (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Preparing to unpack .../2-linux-libc-dev_5.3.0-24.26_s390x.deb ... Unpacking linux-libc-dev:s390x (5.3.0-24.26) over (5.3.0-18.19) ... Selecting previously unselected package libisl22:s390x. Preparing to unpack .../3-libisl22_0.22-2_s390x.deb ... Unpacking libisl22:s390x (0.22-2) ... Preparing to unpack .../4-libcc1-0_9.2.1-21ubuntu1_s390x.deb ... Unpacking libcc1-0:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../5-binutils-s390x-linux-gnu_2.33.1-6ubuntu3_s390x.deb ... Unpacking binutils-s390x-linux-gnu (2.33.1-6ubuntu3) over (2.33-2ubuntu1) ... Preparing to unpack .../6-libbinutils_2.33.1-6ubuntu3_s390x.deb ... Unpacking libbinutils:s390x (2.33.1-6ubuntu3) over (2.33-2ubuntu1) ... Preparing to unpack .../7-binutils-common_2.33.1-6ubuntu3_s390x.deb ... Unpacking binutils-common:s390x (2.33.1-6ubuntu3) over (2.33-2ubuntu1) ... Preparing to unpack .../8-binutils_2.33.1-6ubuntu3_s390x.deb ... Unpacking binutils (2.33.1-6ubuntu3) over (2.33-2ubuntu1) ... Preparing to unpack .../9-gcc-9-base_9.2.1-21ubuntu1_s390x.deb ... Unpacking gcc-9-base:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Setting up gcc-9-base:s390x (9.2.1-21ubuntu1) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../libgcc1_1%3a9.2.1-21ubuntu1_s390x.deb ... Unpacking libgcc1:s390x (1:9.2.1-21ubuntu1) over (1:9.2.1-9ubuntu2) ... Setting up libgcc1:s390x (1:9.2.1-21ubuntu1) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../00-libgomp1_9.2.1-21ubuntu1_s390x.deb ... Unpacking libgomp1:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../01-libitm1_9.2.1-21ubuntu1_s390x.deb ... Unpacking libitm1:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../02-libatomic1_9.2.1-21ubuntu1_s390x.deb ... Unpacking libatomic1:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../03-libasan5_9.2.1-21ubuntu1_s390x.deb ... Unpacking libasan5:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../04-libubsan1_9.2.1-21ubuntu1_s390x.deb ... Unpacking libubsan1:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../05-g++-9_9.2.1-21ubuntu1_s390x.deb ... Unpacking g++-9 (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../06-libstdc++-9-dev_9.2.1-21ubuntu1_s390x.deb ... Unpacking libstdc++-9-dev:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../07-libgcc-9-dev_9.2.1-21ubuntu1_s390x.deb ... Unpacking libgcc-9-dev:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../08-gcc-9_9.2.1-21ubuntu1_s390x.deb ... Unpacking gcc-9 (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../09-cpp-9_9.2.1-21ubuntu1_s390x.deb ... Unpacking cpp-9 (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../10-libstdc++6_9.2.1-21ubuntu1_s390x.deb ... Unpacking libstdc++6:s390x (9.2.1-21ubuntu1) over (9.2.1-9ubuntu2) ... Setting up libstdc++6:s390x (9.2.1-21ubuntu1) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../libc6_2.30-0ubuntu3_s390x.deb ... Unpacking libc6:s390x (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Setting up libc6:s390x (2.30-0ubuntu3) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu2_s390x.deb ... Unpacking base-files (11ubuntu2) over (10.2ubuntu7) ... Setting up base-files (11ubuntu2) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/update-motd.d/50-motd-news ... Updating /root/.profile to current default. (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../debianutils_4.9.1_s390x.deb ... Unpacking debianutils (4.9.1) over (4.8.6.3) ... Setting up debianutils (4.9.1) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../bash_5.0-5ubuntu1_s390x.deb ... Unpacking bash (5.0-5ubuntu1) over (5.0-4ubuntu1) ... Setting up bash (5.0-5ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.34-0.1ubuntu4_s390x.deb ... Unpacking bsdutils (1:2.34-0.1ubuntu4) over (1:2.34-0.1ubuntu2) ... Setting up bsdutils (1:2.34-0.1ubuntu4) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../gzip_1.10-0ubuntu4_s390x.deb ... Unpacking gzip (1.10-0ubuntu4) over (1.10-0ubuntu3) ... Setting up gzip (1.10-0ubuntu4) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../hostname_3.23_s390x.deb ... Unpacking hostname (3.23) over (3.22) ... Setting up hostname (3.23) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.1+20191019-1ubuntu1_s390x.deb ... Unpacking ncurses-bin (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Setting up ncurses-bin (6.1+20191019-1ubuntu1) ... (Reading database ... 12536 files and directories currently installed.) Preparing to unpack .../perl_5.30.0-9_s390x.deb ... Unpacking perl (5.30.0-9) over (5.28.1-6build1) ... Replacing files in old package perl-base (5.28.1-6build1) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../perl-modules-5.30_5.30.0-9_all.deb ... Unpacking perl-modules-5.30 (5.30.0-9) ... Selecting previously unselected package libperl5.30:s390x. Preparing to unpack .../libperl5.30_5.30.0-9_s390x.deb ... Unpacking libperl5.30:s390x (5.30.0-9) ... Preparing to unpack .../perl-base_5.30.0-9_s390x.deb ... Unpacking perl-base (5.30.0-9) over (5.28.1-6build1) ... Setting up perl-base (5.30.0-9) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../bzip2_1.0.8-2_s390x.deb ... Unpacking bzip2 (1.0.8-2) over (1.0.6-9.2) ... Preparing to unpack .../libbz2-1.0_1.0.8-2_s390x.deb ... Unpacking libbz2-1.0:s390x (1.0.8-2) over (1.0.6-9.2) ... Setting up libbz2-1.0:s390x (1.0.8-2) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libblkid1_2.34-0.1ubuntu4_s390x.deb ... Unpacking libblkid1:s390x (2.34-0.1ubuntu4) over (2.34-0.1ubuntu2) ... Setting up libblkid1:s390x (2.34-0.1ubuntu4) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libuuid1_2.34-0.1ubuntu4_s390x.deb ... Unpacking libuuid1:s390x (2.34-0.1ubuntu4) over (2.34-0.1ubuntu2) ... Setting up libuuid1:s390x (2.34-0.1ubuntu4) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libfdisk1_2.34-0.1ubuntu4_s390x.deb ... Unpacking libfdisk1:s390x (2.34-0.1ubuntu4) over (2.34-0.1ubuntu2) ... Setting up libfdisk1:s390x (2.34-0.1ubuntu4) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.34-7_s390x.deb ... Unpacking libpcre2-8-0:s390x (10.34-7) over (10.32-5) ... Setting up libpcre2-8-0:s390x (10.34-7) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libselinux1_3.0-1_s390x.deb ... Unpacking libselinux1:s390x (3.0-1) over (2.9-2) ... Setting up libselinux1:s390x (3.0-1) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libmount1_2.34-0.1ubuntu4_s390x.deb ... Unpacking libmount1:s390x (2.34-0.1ubuntu4) over (2.34-0.1ubuntu2) ... Setting up libmount1:s390x (2.34-0.1ubuntu4) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libncurses6_6.1+20191019-1ubuntu1_s390x.deb ... Unpacking libncurses6:s390x (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Preparing to unpack .../libtinfo6_6.1+20191019-1ubuntu1_s390x.deb ... Unpacking libtinfo6:s390x (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Setting up libtinfo6:s390x (6.1+20191019-1ubuntu1) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.1+20191019-1ubuntu1_s390x.deb ... Unpacking libncursesw6:s390x (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Setting up libncursesw6:s390x (6.1+20191019-1ubuntu1) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.34-0.1ubuntu4_s390x.deb ... Unpacking libsmartcols1:s390x (2.34-0.1ubuntu4) over (2.34-0.1ubuntu2) ... Setting up libsmartcols1:s390x (2.34-0.1ubuntu4) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../fdisk_2.34-0.1ubuntu4_s390x.deb ... Unpacking fdisk (2.34-0.1ubuntu4) over (2.34-0.1ubuntu2) ... Setting up fdisk (2.34-0.1ubuntu4) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../util-linux_2.34-0.1ubuntu4_s390x.deb ... Unpacking util-linux (2.34-0.1ubuntu4) over (2.34-0.1ubuntu2) ... Setting up util-linux (2.34-0.1ubuntu4) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.250ubuntu2_s390x.deb ... Unpacking libdebconfclient0:s390x (0.250ubuntu2) over (0.249ubuntu1) ... Setting up libdebconfclient0:s390x (0.250ubuntu2) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.47_s390x.deb ... Unpacking base-passwd (3.5.47) over (3.5.46) ... Setting up base-passwd (3.5.47) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../libc-bin_2.30-0ubuntu3_s390x.deb ... Unpacking libc-bin (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Setting up libc-bin (2.30-0ubuntu3) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.1+20191019-1ubuntu1_all.deb ... Unpacking ncurses-base (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Setting up ncurses-base (6.1+20191019-1ubuntu1) ... (Reading database ... 14438 files and directories currently installed.) Preparing to unpack .../lsb-base_11.1.0ubuntu2_all.deb ... Unpacking lsb-base (11.1.0ubuntu2) over (11.0.1ubuntu1) ... Setting up lsb-base (11.1.0ubuntu2) ... (Reading database ... 14437 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-1ubuntu1_s390x.deb ... Unpacking sysvinit-utils (2.96-1ubuntu1) over (2.95-5ubuntu2) ... Setting up sysvinit-utils (2.96-1ubuntu1) ... (Reading database ... 14437 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.9.2-2_s390x.deb ... Unpacking liblz4-1:s390x (1.9.2-2) over (1.9.1-1) ... Setting up liblz4-1:s390x (1.9.2-2) ... (Reading database ... 14437 files and directories currently installed.) Preparing to unpack .../systemd-sysv_244-3ubuntu1_s390x.deb ... Unpacking systemd-sysv (244-3ubuntu1) over (242-7ubuntu3) ... Preparing to unpack .../libacl1_2.2.53-5ubuntu1_s390x.deb ... Unpacking libacl1:s390x (2.2.53-5ubuntu1) over (2.2.53-4) ... Setting up libacl1:s390x (2.2.53-5ubuntu1) ... (Reading database ... 14437 files and directories currently installed.) Preparing to unpack .../libapparmor1_2.13.3-7ubuntu1_s390x.deb ... Unpacking libapparmor1:s390x (2.13.3-7ubuntu1) over (2.13.3-5ubuntu1) ... Preparing to unpack .../libaudit-common_1%3a2.8.5-2ubuntu5_all.deb ... Unpacking libaudit-common (1:2.8.5-2ubuntu5) over (1:2.8.5-2ubuntu1) ... Setting up libaudit-common (1:2.8.5-2ubuntu5) ... (Reading database ... 14437 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.9-2.1_s390x.deb ... Unpacking libcap-ng0:s390x (0.7.9-2.1) over (0.7.9-2) ... Setting up libcap-ng0:s390x (0.7.9-2.1) ... (Reading database ... 14437 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.8.5-2ubuntu5_s390x.deb ... Unpacking libaudit1:s390x (1:2.8.5-2ubuntu5) over (1:2.8.5-2ubuntu1) ... Setting up libaudit1:s390x (1:2.8.5-2ubuntu5) ... (Reading database ... 14437 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.27-1_s390x.deb ... Unpacking libcap2:s390x (1:2.27-1) over (1:2.25-2) ... Preparing to unpack .../libudev1_244-3ubuntu1_s390x.deb ... Unpacking libudev1:s390x (244-3ubuntu1) over (242-7ubuntu3) ... Setting up libudev1:s390x (244-3ubuntu1) ... (Reading database ... 14437 files and directories currently installed.) Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.155-2ubuntu7_s390x.deb ... Unpacking libdevmapper1.02.1:s390x (2:1.02.155-2ubuntu7) over (2:1.02.155-2ubuntu6) ... Preparing to unpack .../libjson-c4_0.13.1+dfsg-6_s390x.deb ... Unpacking libjson-c4:s390x (0.13.1+dfsg-6) over (0.13.1+dfsg-4) ... Preparing to unpack .../libcryptsetup12_2%3a2.2.2-1ubuntu1_s390x.deb ... Unpacking libcryptsetup12:s390x (2:2.2.2-1ubuntu1) over (2:2.2.0-3ubuntu1) ... Selecting previously unselected package libnettle7:s390x. Preparing to unpack .../libnettle7_3.5.1+really3.5.1-2_s390x.deb ... Unpacking libnettle7:s390x (3.5.1+really3.5.1-2) ... Setting up libnettle7:s390x (3.5.1+really3.5.1-2) ... Selecting previously unselected package libhogweed5:s390x. (Reading database ... 14444 files and directories currently installed.) Preparing to unpack .../libhogweed5_3.5.1+really3.5.1-2_s390x.deb ... Unpacking libhogweed5:s390x (3.5.1+really3.5.1-2) ... Setting up libhogweed5:s390x (3.5.1+really3.5.1-2) ... (Reading database ... 14447 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.23.18.1-2_s390x.deb ... Unpacking libp11-kit0:s390x (0.23.18.1-2) over (0.23.17-2) ... Setting up libp11-kit0:s390x (0.23.18.1-2) ... (Reading database ... 14447 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.15.0-2_s390x.deb ... Unpacking libtasn1-6:s390x (4.15.0-2) over (4.14-3) ... Setting up libtasn1-6:s390x (4.15.0-2) ... (Reading database ... 14447 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.11.1-2_s390x.deb ... Unpacking libgnutls30:s390x (3.6.11.1-2) over (3.6.9-5ubuntu1) ... Setting up libgnutls30:s390x (3.6.11.1-2) ... (Reading database ... 14446 files and directories currently installed.) Preparing to unpack .../libkmod2_26-3ubuntu1_s390x.deb ... Unpacking libkmod2:s390x (26-3ubuntu1) over (26-1ubuntu1) ... Preparing to unpack .../libpam0g_1.3.1-5ubuntu4_s390x.deb ... Unpacking libpam0g:s390x (1.3.1-5ubuntu4) over (1.3.1-5ubuntu1) ... Setting up libpam0g:s390x (1.3.1-5ubuntu4) ... (Reading database ... 14446 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.4.2-2ubuntu1_s390x.deb ... Unpacking libseccomp2:s390x (2.4.2-2ubuntu1) over (2.4.1-0ubuntu0.19.10.3) ... Setting up libseccomp2:s390x (2.4.2-2ubuntu1) ... (Reading database ... 14446 files and directories currently installed.) Preparing to unpack .../mount_2.34-0.1ubuntu4_s390x.deb ... Unpacking mount (2.34-0.1ubuntu4) over (2.34-0.1ubuntu2) ... Preparing to unpack .../systemd_244-3ubuntu1_s390x.deb ... Unpacking systemd (244-3ubuntu1) over (242-7ubuntu3) ... Preparing to unpack .../libsystemd0_244-3ubuntu1_s390x.deb ... Unpacking libsystemd0:s390x (244-3ubuntu1) over (242-7ubuntu3) ... Setting up libsystemd0:s390x (244-3ubuntu1) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libzstd1_1.4.4+dfsg-1_s390x.deb ... Unpacking libzstd1:s390x (1.4.4+dfsg-1) over (1.4.3+dfsg-1) ... Setting up libzstd1:s390x (1.4.4+dfsg-1) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.90_1.9.5_s390x.deb ... Unpacking libapt-pkg5.90:s390x (1.9.5) over (1.9.4) ... Setting up libapt-pkg5.90:s390x (1.9.5) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.8.5-3ubuntu1_s390x.deb ... Unpacking libgcrypt20:s390x (1.8.5-3ubuntu1) over (1.8.4-5ubuntu2) ... Setting up libgcrypt20:s390x (1.8.5-3ubuntu1) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.17-3ubuntu1_s390x.deb ... Unpacking gpgv (2.2.17-3ubuntu1) over (2.2.12-1ubuntu3) ... Setting up gpgv (2.2.17-3ubuntu1) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../archives/apt_1.9.5_s390x.deb ... Unpacking apt (1.9.5) over (1.9.4) ... Setting up apt (1.9.5) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.3.1-5ubuntu4_s390x.deb ... Unpacking libpam-modules-bin (1.3.1-5ubuntu4) over (1.3.1-5ubuntu1) ... Setting up libpam-modules-bin (1.3.1-5ubuntu4) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.3.1-5ubuntu4_s390x.deb ... Unpacking libpam-modules:s390x (1.3.1-5ubuntu4) over (1.3.1-5ubuntu1) ... Setting up libpam-modules:s390x (1.3.1-5ubuntu4) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.4.48-5_s390x.deb ... Unpacking libattr1:s390x (1:2.4.48-5) over (1:2.4.48-4) ... Setting up libattr1:s390x (1:2.4.48-5) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.3.1-5ubuntu4_all.deb ... Unpacking libpam-runtime (1.3.1-5ubuntu4) over (1.3.1-5ubuntu1) ... Setting up libpam-runtime (1.3.1-5ubuntu4) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libsepol1_3.0-1_s390x.deb ... Unpacking libsepol1:s390x (3.0-1) over (2.9-2) ... Setting up libsepol1:s390x (3.0-1) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.0-1_all.deb ... Unpacking libsemanage-common (3.0-1) over (2.9-3) ... Setting up libsemanage-common (3.0-1) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../libsemanage1_3.0-1_s390x.deb ... Unpacking libsemanage1:s390x (3.0-1) over (2.9-3) ... Setting up libsemanage1:s390x (3.0-1) ... (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../0-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) over (0.0.12) ... Preparing to unpack .../1-libsqlite3-0_3.30.1-1ubuntu1_s390x.deb ... Unpacking libsqlite3-0:s390x (3.30.1-1ubuntu1) over (3.29.0-2) ... Preparing to unpack .../2-gpg_2.2.17-3ubuntu1_s390x.deb ... Unpacking gpg (2.2.17-3ubuntu1) over (2.2.12-1ubuntu3) ... Preparing to unpack .../3-gpgconf_2.2.17-3ubuntu1_s390x.deb ... Unpacking gpgconf (2.2.17-3ubuntu1) over (2.2.12-1ubuntu3) ... Preparing to unpack .../4-gpg-agent_2.2.17-3ubuntu1_s390x.deb ... Unpacking gpg-agent (2.2.17-3ubuntu1) over (2.2.12-1ubuntu3) ... Preparing to unpack .../5-liblockfile-bin_1.16-1.1_s390x.deb ... Unpacking liblockfile-bin (1.16-1.1) over (1.15-1) ... Preparing to unpack .../6-liblockfile1_1.16-1.1_s390x.deb ... Unpacking liblockfile1:s390x (1.16-1.1) over (1.15-1) ... Setting up libapparmor1:s390x (2.13.3-7ubuntu1) ... Setting up liblockfile-bin (1.16-1.1) ... Setting up perl-modules-5.30 (5.30.0-9) ... Setting up libsqlite3-0:s390x (3.30.1-1ubuntu1) ... Setting up binutils-common:s390x (2.33.1-6ubuntu3) ... Setting up linux-libc-dev:s390x (5.3.0-24.26) ... Setting up libgomp1:s390x (9.2.1-21ubuntu1) ... Setting up bzip2 (1.0.8-2) ... Setting up libcap2:s390x (1:2.27-1) ... Setting up libasan5:s390x (9.2.1-21ubuntu1) ... Setting up libncurses6:s390x (6.1+20191019-1ubuntu1) ... Setting up libatomic1:s390x (9.2.1-21ubuntu1) ... Setting up libubsan1:s390x (9.2.1-21ubuntu1) ... Setting up libdevmapper1.02.1:s390x (2:1.02.155-2ubuntu7) ... Setting up mount (2.34-0.1ubuntu4) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up gpgconf (2.2.17-3ubuntu1) ... Setting up libperl5.30:s390x (5.30.0-9) ... Setting up libisl22:s390x (0.22-2) ... Setting up liblockfile1:s390x (1.16-1.1) ... Setting up libjson-c4:s390x (0.13.1+dfsg-6) ... Setting up libbinutils:s390x (2.33.1-6ubuntu3) ... Setting up libc-dev-bin (2.30-0ubuntu3) ... Setting up libcc1-0:s390x (9.2.1-21ubuntu1) ... Setting up gpg (2.2.17-3ubuntu1) ... Setting up libitm1:s390x (9.2.1-21ubuntu1) ... Setting up libkmod2:s390x (26-3ubuntu1) ... Setting up binutils-s390x-linux-gnu (2.33.1-6ubuntu3) ... Setting up gpg-agent (2.2.17-3ubuntu1) ... Installing new version of config file /etc/logcheck/ignore.d.server/gpg-agent ... Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket -> /usr/lib/systemd/user/gpg-agent-browser.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket -> /usr/lib/systemd/user/gpg-agent-extra.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket -> /usr/lib/systemd/user/gpg-agent-ssh.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent.socket -> /usr/lib/systemd/user/gpg-agent.socket. Setting up binutils (2.33.1-6ubuntu3) ... Setting up libgcc-9-dev:s390x (9.2.1-21ubuntu1) ... Setting up perl (5.30.0-9) ... Setting up cpp-9 (9.2.1-21ubuntu1) ... Setting up libc6-dev:s390x (2.30-0ubuntu3) ... Setting up libcryptsetup12:s390x (2:2.2.2-1ubuntu1) ... Setting up gcc-9 (9.2.1-21ubuntu1) ... Setting up libstdc++-9-dev:s390x (9.2.1-21ubuntu1) ... Setting up systemd (244-3ubuntu1) ... Installing new version of config file /etc/dhcp/dhclient-enter-hooks.d/resolved ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from random generator. Setting up g++-9 (9.2.1-21ubuntu1) ... Setting up systemd-sysv (244-3ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18320142 s390x focal -c chroot:build-PACKAGEBUILD-18320142 --arch=s390x --dist=focal --nolog libmaus2_2.0.611-1.dsc Initiating build PACKAGEBUILD-18320142 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:44:14 UTC 2019 s390x sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-s390x-014.buildd +==============================================================================+ | libmaus2 2.0.611-1 (s390x) 05 Jan 2020 12:05 | +==============================================================================+ Package: libmaus2 Version: 2.0.611-1 Source Version: 2.0.611-1 Distribution: focal Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x I: NOTICE: Log filtering will replace 'build/libmaus2-mgNWcI/libmaus2-2.0.611' with '<>' I: NOTICE: Log filtering will replace 'build/libmaus2-mgNWcI' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18320142/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- libmaus2_2.0.611-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-WDU1pG/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-WDU1pG/apt_archive ./ InRelease Get:2 copy:/<>/resolver-WDU1pG/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-WDU1pG/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-WDU1pG/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-WDU1pG/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-WDU1pG/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 12~), d-shlibs, pkg-config, zlib1g-dev Filtered Build-Depends: debhelper (>= 12~), d-shlibs, pkg-config, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-libmaus2-dummy' in '/<>/resolver-xcFggT/apt_archive/sbuild-build-depends-libmaus2-dummy.deb'. Ign:1 copy:/<>/resolver-xcFggT/apt_archive ./ InRelease Get:2 copy:/<>/resolver-xcFggT/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-xcFggT/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-xcFggT/apt_archive ./ Sources [237 B] Get:5 copy:/<>/resolver-xcFggT/apt_archive ./ Packages [555 B] Fetched 2911 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install libmaus2 build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu63 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu63 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config po-debconf sbuild-build-depends-libmaus2-dummy zlib1g-dev 0 upgraded, 37 newly installed, 0 to remove and 0 not upgraded. Need to get 16.9 MB of archives. After this operation, 67.8 MB of additional disk space will be used. Get:1 copy:/<>/resolver-xcFggT/apt_archive ./ sbuild-build-depends-libmaus2-dummy 0.invalid.0 [880 B] Get:2 http://ftpmaster.internal/ubuntu focal/main s390x libbsd0 s390x 0.10.0-1 [43.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main s390x bsdmainutils s390x 11.1.2ubuntu2 [181 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main s390x libuchardet0 s390x 0.0.6-3 [64.5 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main s390x groff-base s390x 1.22.4-4 [824 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main s390x libpipeline1 s390x 1.5.1-3 [26.2 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main s390x man-db s390x 2.9.0-2 [1103 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main s390x libmagic-mgc s390x 1:5.37-6 [210 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main s390x libmagic1 s390x 1:5.37-6 [72.3 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main s390x file s390x 1:5.37-6 [23.0 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main s390x libelf1 s390x 0.176-1.1 [41.4 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main s390x libglib2.0-0 s390x 2.63.3-1 [1176 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main s390x libicu63 s390x 63.2-2 [8044 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main s390x libxml2 s390x 2.9.4+dfsg1-8ubuntu1 [664 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main s390x gettext-base s390x 0.19.8.1-10 [49.1 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main s390x libsigsegv2 s390x 2.12-2 [13.8 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main s390x m4 s390x 1.4.18-4 [196 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main s390x autoconf all 2.69-11ubuntu1 [321 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main s390x autotools-dev all 20180224.1 [39.6 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main s390x automake all 1:1.16.1-4ubuntu3 [522 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main s390x autopoint all 0.19.8.1-10 [412 kB] Get:22 http://ftpmaster.internal/ubuntu focal/universe s390x d-shlibs all 0.88 [10.5 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main s390x libtool all 2.4.6-11 [194 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main s390x dh-autoreconf all 19 [16.1 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main s390x libdebhelper-perl all 12.7.1ubuntu1 [52.0 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main s390x libarchive-zip-perl all 1.67-1 [90.4 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main s390x libsub-override-perl all 0.09-2 [9532 B] Get:28 http://ftpmaster.internal/ubuntu focal/main s390x libfile-stripnondeterminism-perl all 1.6.3-1 [16.0 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main s390x dh-strip-nondeterminism all 1.6.3-1 [5224 B] Get:30 http://ftpmaster.internal/ubuntu focal/main s390x dwz s390x 0.13-5 [146 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main s390x libcroco3 s390x 0.6.13-1 [73.7 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main s390x gettext s390x 0.19.8.1-10 [867 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main s390x intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main s390x po-debconf all 1.0.21 [233 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main s390x debhelper all 12.7.1ubuntu1 [875 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main s390x pkg-config s390x 0.29.1-0ubuntu3 [43.7 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main s390x zlib1g-dev s390x 1:1.2.11.dfsg-1ubuntu3 [173 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 16.9 MB in 0s (72.1 MB/s) Selecting previously unselected package libbsd0:s390x. (Reading database ... 14440 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_s390x.deb ... Unpacking libbsd0:s390x (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2ubuntu2_s390x.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package libuchardet0:s390x. Preparing to unpack .../02-libuchardet0_0.0.6-3_s390x.deb ... Unpacking libuchardet0:s390x (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-4_s390x.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:s390x. Preparing to unpack .../04-libpipeline1_1.5.1-3_s390x.deb ... Unpacking libpipeline1:s390x (1.5.1-3) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.0-2_s390x.deb ... Unpacking man-db (2.9.0-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.37-6_s390x.deb ... Unpacking libmagic-mgc (1:5.37-6) ... Selecting previously unselected package libmagic1:s390x. Preparing to unpack .../07-libmagic1_1%3a5.37-6_s390x.deb ... Unpacking libmagic1:s390x (1:5.37-6) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.37-6_s390x.deb ... Unpacking file (1:5.37-6) ... Selecting previously unselected package libelf1:s390x. Preparing to unpack .../09-libelf1_0.176-1.1_s390x.deb ... Unpacking libelf1:s390x (0.176-1.1) ... Selecting previously unselected package libglib2.0-0:s390x. Preparing to unpack .../10-libglib2.0-0_2.63.3-1_s390x.deb ... Unpacking libglib2.0-0:s390x (2.63.3-1) ... Selecting previously unselected package libicu63:s390x. Preparing to unpack .../11-libicu63_63.2-2_s390x.deb ... Unpacking libicu63:s390x (63.2-2) ... Selecting previously unselected package libxml2:s390x. Preparing to unpack .../12-libxml2_2.9.4+dfsg1-8ubuntu1_s390x.deb ... Unpacking libxml2:s390x (2.9.4+dfsg1-8ubuntu1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../13-gettext-base_0.19.8.1-10_s390x.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package libsigsegv2:s390x. Preparing to unpack .../14-libsigsegv2_2.12-2_s390x.deb ... Unpacking libsigsegv2:s390x (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../15-m4_1.4.18-4_s390x.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../16-autoconf_2.69-11ubuntu1_all.deb ... Unpacking autoconf (2.69-11ubuntu1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../17-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../18-automake_1%3a1.16.1-4ubuntu3_all.deb ... Unpacking automake (1:1.16.1-4ubuntu3) ... Selecting previously unselected package autopoint. Preparing to unpack .../19-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../20-d-shlibs_0.88_all.deb ... Unpacking d-shlibs (0.88) ... Selecting previously unselected package libtool. Preparing to unpack .../21-libtool_2.4.6-11_all.deb ... Unpacking libtool (2.4.6-11) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../22-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../23-libdebhelper-perl_12.7.1ubuntu1_all.deb ... Unpacking libdebhelper-perl (12.7.1ubuntu1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../24-libarchive-zip-perl_1.67-1_all.deb ... Unpacking libarchive-zip-perl (1.67-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../25-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../26-libfile-stripnondeterminism-perl_1.6.3-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.6.3-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../27-dh-strip-nondeterminism_1.6.3-1_all.deb ... Unpacking dh-strip-nondeterminism (1.6.3-1) ... Selecting previously unselected package dwz. Preparing to unpack .../28-dwz_0.13-5_s390x.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libcroco3:s390x. Preparing to unpack .../29-libcroco3_0.6.13-1_s390x.deb ... Unpacking libcroco3:s390x (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../30-gettext_0.19.8.1-10_s390x.deb ... Unpacking gettext (0.19.8.1-10) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../31-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../32-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../33-debhelper_12.7.1ubuntu1_all.deb ... Unpacking debhelper (12.7.1ubuntu1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../34-pkg-config_0.29.1-0ubuntu3_s390x.deb ... Unpacking pkg-config (0.29.1-0ubuntu3) ... Selecting previously unselected package zlib1g-dev:s390x. Preparing to unpack .../35-zlib1g-dev_1%3a1.2.11.dfsg-1ubuntu3_s390x.deb ... Unpacking zlib1g-dev:s390x (1:1.2.11.dfsg-1ubuntu3) ... Selecting previously unselected package sbuild-build-depends-libmaus2-dummy. Preparing to unpack .../36-sbuild-build-depends-libmaus2-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-libmaus2-dummy (0.invalid.0) ... Setting up libpipeline1:s390x (1.5.1-3) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:s390x (2.63.3-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.7.1ubuntu1) ... Setting up libmagic1:s390x (1:5.37-6) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.37-6) ... Setting up libicu63:s390x (63.2-2) ... Setting up autotools-dev (20180224.1) ... Setting up libsigsegv2:s390x (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up pkg-config (0.29.1-0ubuntu3) ... Setting up d-shlibs (0.88) ... Setting up zlib1g-dev:s390x (1:1.2.11.dfsg-1ubuntu3) ... Setting up libuchardet0:s390x (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libbsd0:s390x (0.10.0-1) ... Setting up libelf1:s390x (0.176-1.1) ... Setting up libxml2:s390x (2.9.4+dfsg1-8ubuntu1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-1) ... Setting up libtool (2.4.6-11) ... Setting up m4 (1.4.18-4) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:s390x (0.6.13-1) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dh-strip-nondeterminism (1.6.3-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (12.7.1ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-libmaus2-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-170-generic s390x (s390x) Toolchain package versions: binutils_2.33.1-6ubuntu3 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-21ubuntu1 gcc-9_9.2.1-21ubuntu1 libc6-dev_2.30-0ubuntu3 libstdc++-9-dev_9.2.1-21ubuntu1 libstdc++6_9.2.1-21ubuntu1 linux-libc-dev_5.3.0-24.26 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.5 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11ubuntu2 base-passwd_3.5.47 bash_5.0-5ubuntu1 binutils_2.33.1-6ubuntu3 binutils-common_2.33.1-6ubuntu3 binutils-s390x-linux-gnu_2.33.1-6ubuntu3 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu4 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.2.1-21ubuntu1 d-shlibs_0.88 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.1ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-5 e2fsprogs_1.45.3-4ubuntu2 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu4 file_1:5.37-6 findutils_4.6.0+git+20190209-2ubuntu1 g++_4:9.2.1-3.1ubuntu1 g++-9_9.2.1-21ubuntu1 gcc_4:9.2.1-3.1ubuntu1 gcc-9_9.2.1-21ubuntu1 gcc-9-base_9.2.1-21ubuntu1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpg_2.2.17-3ubuntu1 gpg-agent_2.2.17-3ubuntu1 gpgconf_2.2.17-3ubuntu1 gpgv_2.2.17-3ubuntu1 grep_3.3-1build1 groff-base_1.22.4-4 gzip_1.10-0ubuntu4 hostname_3.23 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5ubuntu1 libapparmor1_2.13.3-7ubuntu1 libapt-pkg5.90_1.9.5 libarchive-zip-perl_1.67-1 libargon2-1_0~20171227-0.2 libasan5_9.2.1-21ubuntu1 libassuan0_2.5.3-7ubuntu1 libatomic1_9.2.1-21ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu5 libaudit1_1:2.8.5-2ubuntu5 libbinutils_2.33.1-6ubuntu3 libblkid1_2.34-0.1ubuntu4 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-0ubuntu3 libc-dev-bin_2.30-0ubuntu3 libc6_2.30-0ubuntu3 libc6-dev_2.30-0ubuntu3 libcap-ng0_0.7.9-2.1 libcap2_1:2.27-1 libcc1-0_9.2.1-21ubuntu1 libcom-err2_1.45.3-4ubuntu2 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.2-1ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.250ubuntu2 libdebhelper-perl_12.7.1ubuntu1 libdevmapper1.02.1_2:1.02.155-2ubuntu7 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1 libext2fs2_1.45.3-4ubuntu2 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu4 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.3-1 libgcc-9-dev_9.2.1-21ubuntu1 libgcc1_1:9.2.1-21ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.63.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.11.1-2 libgomp1_9.2.1-21ubuntu1 libgpg-error0_1.36-7 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libisl22_0.22-2 libitm1_9.2.1-21ubuntu1 libjson-c4_0.13.1+dfsg-6 libkmod2_26-3ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1ubuntu4 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.1-3 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libreadline8_8.0-3 libseccomp2_2.4.2-2ubuntu1 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu4 libsqlite3-0_3.30.1-1ubuntu1 libss2_1.45.3-4ubuntu2 libssl1.1_1.1.1c-1ubuntu4 libstdc++-9-dev_9.2.1-21ubuntu1 libstdc++6_9.2.1-21ubuntu1 libsub-override-perl_0.09-2 libsystemd0_244-3ubuntu1 libtasn1-6_4.15.0-2 libtinfo6_6.1+20191019-1ubuntu1 libtool_2.4.6-11 libubsan1_9.2.1-21ubuntu1 libuchardet0_0.0.6-3 libudev1_244-3ubuntu1 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu4 libxml2_2.9.4+dfsg1-8ubuntu1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.3.0-24.26 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17ubuntu3 mount_2.34-0.1ubuntu4 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29.1-0ubuntu3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libmaus2-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_244-3ubuntu1 systemd-sysv_244-3ubuntu1 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 util-linux_2.34-0.1ubuntu4 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 zlib1g-dev_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Apr 12 22:22:01 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libmaus2_2.0.611-1.dsc dpkg-source: info: extracting libmaus2 in libmaus2-2.0.611 dpkg-source: info: unpacking libmaus2_2.0.611.orig.tar.bz2 dpkg-source: info: unpacking libmaus2_2.0.611-1.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18320142 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18320142 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18320142 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libmaus2 dpkg-buildpackage: info: source version 2.0.611-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:6: installing './compile' configure.ac:8: installing './missing' src/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' dh_auto_configure -a ./configure --build=s390x-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/s390x-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking configure: WARNING: unrecognized options: --disable-maintainer-mode configure: Configuring for source in directory . checking build system type... s390x-ibm-linux-gnu checking host system type... s390x-ibm-linux-gnu checking target system type... s390x-ibm-linux-gnu checking how to print strings... printf checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert s390x-ibm-linux-gnu file names to s390x-ibm-linux-gnu format... func_convert_file_noop checking how to convert s390x-ibm-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf64_s390) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking how to create a pax tar archive... gnutar checking dependency style of gcc... none checking whether we are cross compiling... no checking for bash... /bin/bash checking for base64... /usr/bin/base64 checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf64_s390 checking if the linker (/usr/bin/ld -m elf64_s390) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf64_s390) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf64_s390) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking dependency style of g++... none checking whether host cpu is x86_64... no checking whether host os is GNU/Linux... yes checking whether we are compiling for x86_64 CPU on GNU/Linux OS ... no checking size of unsigned long... 8 checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for zlib... yes checking for zlib... yes checking whether we can compile a zlib program... yes checking snappy.h usability... no checking snappy.h presence... no checking for snappy.h... no checking for ANSI C header files... (cached) yes checking aio.h usability... yes checking aio.h presence... yes checking for aio.h... yes checking execinfo.h usability... yes checking execinfo.h presence... yes checking for execinfo.h... yes checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for unistd.h... (cached) yes checking linux/sysctl.h usability... yes checking linux/sysctl.h presence... yes checking for linux/sysctl.h... yes checking features.h usability... yes checking features.h presence... yes checking for features.h... yes checking for stdint.h... (cached) yes checking for dlfcn.h... (cached) yes checking for dlopen... no checking for dlerror... no checking for dlsym... no checking for dlclose... no checking for dlopen in -ldl... yes checking for dlerror in -ldl... yes checking for dlsym in -ldl... yes checking for dlclose in -ldl... yes checking whether we found the dlopen function anywhere... yes checking whether we found the dlerror function anywhere... yes checking whether we found the dlsym function anywhere... yes checking whether we found the dlclose function anywhere... yes checking whether we found all the functions required for dynamic modules somewhere... yes checking whether we need the dl library for any of the dl functions... yes checking for aio_suspend in -lrt... yes checking for backtrace... yes checking for setrlimit... yes checking for fcntl... yes checking whether the C++ compiler supports the -std=gnu++0x flag... yes checking whether the C++ compiler supports the -msse4 flag... no checking whether the C++ compiler supports the -msse2 flag... no checking whether the C++ compiler supports the -mssse3 flag... no checking whether the C++ compiler supports the -msse4.1 flag... no checking whether the C++ compiler supports the -mavx flag... no checking whether the C++ compiler supports the -mavx2 flag... no checking smmintrin.h usability... no checking smmintrin.h presence... no checking for smmintrin.h... no checking immintrin.h usability... no checking immintrin.h presence... no checking for immintrin.h... no checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (X128/8 variant)... no checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (X128/16 variant)... no checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (Y256/8 variant)... no checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (Y256/16 variant)... no checking whether the C++ compiler supports all intrinsics required for one to many global alignment using AVX2... no checking cstdint usability... yes checking cstdint presence... yes checking for cstdint... yes checking whether the C++ compiler supports the -msse4 flag... no checking for mmap... yes checking for mmap flag MAP_HUGETLB... yes checking whether the C++ compiler supports the -W flag... yes checking whether the C++ compiler supports the -Wall flag... yes checking whether the C++ compiler supports the -Wnon-virtual-dtor flag... yes checking for OpenMP flag of C++ compiler... -fopenmp checking whether std::unique_ptr exists... yes checking whether std::shared_ptr exists... yes checking whether std::unordered_map exists... yes checking whether std::unordered_set exists... yes checking whether std::move exists... yes checking for sys/types.h... (cached) yes checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking for windows.h... (cached) no checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking regex.h usability... yes checking regex.h presence... yes checking for regex.h... yes checking whether byte ordering is bigendian... yes checking whether we can compile a program using posix regex... yes checking whether we can compile a program using statfs... yes checking whether struct statfs has field f_iosize... no checking whether struct statfs has field f_bsize... yes checking whether the C++ compiler supports the -pthread flag... yes checking for pthread spin lock support... yes checking for sem_post... yes checking for sem_wait... yes checking for sem_init... yes checking for sem_destroy... yes checking for sem_timedwait... yes checking for pthread_setname_np... yes checking for pthread_set_name_np... no checking for pthread_getname_np... yes checking for pthread_get_name_np... no checking for pthread_setaffinity_np... yes checking for pthread_attr_setaffinity_np... yes checking for prctl... yes checking for pthread_setaffinity_np support... checking whether the C++ compiler supports __sync_fetch_and_add... yes checking whether the C++ compiler supports __sync_add_and_fetch... yes checking whether the C++ compiler supports __sync_fetch_and_and... yes checking whether the C++ compiler supports __sync_fetch_and_or... yes checking whether the C++ compiler supports __sync_fetch_and_sub... yes checking whether the C++ compiler supports __sync_bool_compare_and_swap... yes checking whether the C++ compiler supports __sync_lock_test_and_set... yes checking whether the C++ compiler supports __sync_lock_release... yes checking whether the C++ compiler supports __sync_val_compare_and_swap... yes checking whether the C++ compiler supports synchronous lock operations... yes checking whether posix_memalign is present... yes checking whether getpagesize is present... yes checking whether MSG_CMSG_CLOEXEC is defined... yes checking for libarchive... no checking libkern/OSAtomic.h usability... no checking libkern/OSAtomic.h presence... no checking for libkern/OSAtomic.h... no checking for unsigned __int128... yes checking whether we can compile a program using the gmp library... no checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating libmaus2.pc config.status: creating libmaus2digests.pc config.status: creating libmaus2irods.pc config.status: creating libmaus2seqchksumsfactory.pc config.status: creating libmaus2fftw.pc config.status: creating ubuntu.sh config.status: creating src/libmaus2/LibMausConfig.hpp config.status: creating test/Makefile config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build -a make -j4 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-I386CacheLineSize.lo `test -f 'libmaus2/util/I386CacheLineSize.cpp' || echo './'`libmaus2/util/I386CacheLineSize.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-OutputFileNameTools.lo `test -f 'libmaus2/util/OutputFileNameTools.cpp' || echo './'`libmaus2/util/OutputFileNameTools.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-Phred.lo `test -f 'libmaus2/fastx/Phred.cpp' || echo './'`libmaus2/fastx/Phred.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-CollatingBamDecoder.lo `test -f 'libmaus2/bambam/CollatingBamDecoder.cpp' || echo './'`libmaus2/bambam/CollatingBamDecoder.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/I386CacheLineSize.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-I386CacheLineSize.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/OutputFileNameTools.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-OutputFileNameTools.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/Phred.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-Phred.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/Phred.cpp -o libmaus2/fastx/la-Phred.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/CollatingBamDecoder.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-CollatingBamDecoder.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-ReadEndsContainer.lo `test -f 'libmaus2/bambam/ReadEndsContainer.cpp' || echo './'`libmaus2/bambam/ReadEndsContainer.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadEndsContainer.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadEndsContainer.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/I386CacheLineSize.cpp -o libmaus2/util/la-I386CacheLineSize.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/OutputFileNameTools.cpp -o libmaus2/util/la-OutputFileNameTools.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-ReadEnds.lo `test -f 'libmaus2/bambam/ReadEnds.cpp' || echo './'`libmaus2/bambam/ReadEnds.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadEnds.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadEnds.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignmentDecoderBase.lo `test -f 'libmaus2/bambam/BamAlignmentDecoderBase.cpp' || echo './'`libmaus2/bambam/BamAlignmentDecoderBase.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignmentDecoderBase.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadEnds.cpp -o libmaus2/bambam/la-ReadEnds.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderBase.cpp -o libmaus2/bambam/la-BamAlignmentDecoderBase.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/CollatingBamDecoder.cpp -o libmaus2/bambam/la-CollatingBamDecoder.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadEndsContainer.cpp -o libmaus2/bambam/la-ReadEndsContainer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-StrCmpNum.lo `test -f 'libmaus2/bambam/StrCmpNum.cpp' || echo './'`libmaus2/bambam/StrCmpNum.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/StrCmpNum.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-StrCmpNum.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/StrCmpNum.cpp -o libmaus2/bambam/la-StrCmpNum.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/huffman/la-KvInitResult.lo `test -f 'libmaus2/huffman/KvInitResult.cpp' || echo './'`libmaus2/huffman/KvInitResult.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/KvInitResult.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-KvInitResult.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-TempFileNameGenerator.lo `test -f 'libmaus2/util/TempFileNameGenerator.cpp' || echo './'`libmaus2/util/TempFileNameGenerator.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/TempFileNameGenerator.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-TempFileNameGenerator.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/KvInitResult.cpp -o libmaus2/huffman/la-KvInitResult.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-TempFileNameGeneratorState.lo `test -f 'libmaus2/util/TempFileNameGeneratorState.cpp' || echo './'`libmaus2/util/TempFileNameGeneratorState.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/TempFileNameGeneratorState.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-TempFileNameGeneratorState.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/TempFileNameGenerator.cpp -o libmaus2/util/la-TempFileNameGenerator.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-ArgInfo.lo `test -f 'libmaus2/util/ArgInfo.cpp' || echo './'`libmaus2/util/ArgInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ArgInfo.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ArgInfo.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Array832.lo `test -f 'libmaus2/util/Array832.cpp' || echo './'`libmaus2/util/Array832.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Array832.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Array832.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/TempFileNameGeneratorState.cpp -o libmaus2/util/la-TempFileNameGeneratorState.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Array864.lo `test -f 'libmaus2/util/Array864.cpp' || echo './'`libmaus2/util/Array864.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Array864.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Array864.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Array832.cpp -o libmaus2/util/la-Array832.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Array864.cpp -o libmaus2/util/la-Array864.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ArgInfo.cpp -o libmaus2/util/la-ArgInfo.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-BitList.lo `test -f 'libmaus2/util/BitList.cpp' || echo './'`libmaus2/util/BitList.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/BitList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-BitList.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/BitList.cpp -o libmaus2/util/la-BitList.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-VarBitList.lo `test -f 'libmaus2/util/VarBitList.cpp' || echo './'`libmaus2/util/VarBitList.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Concat.lo `test -f 'libmaus2/util/Concat.cpp' || echo './'`libmaus2/util/Concat.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/VarBitList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-VarBitList.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Concat.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Concat.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/VarBitList.cpp -o libmaus2/util/la-VarBitList.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-ConcatRequest.lo `test -f 'libmaus2/util/ConcatRequest.cpp' || echo './'`libmaus2/util/ConcatRequest.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ConcatRequest.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ConcatRequest.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-ConsoleColor.lo `test -f 'libmaus2/util/ConsoleColor.cpp' || echo './'`libmaus2/util/ConsoleColor.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ConsoleColor.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ConsoleColor.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ConsoleColor.cpp -o libmaus2/util/la-ConsoleColor.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Demangle.lo `test -f 'libmaus2/util/Demangle.cpp' || echo './'`libmaus2/util/Demangle.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Demangle.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Demangle.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Demangle.cpp -o libmaus2/util/la-Demangle.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-DynamicLoading.lo `test -f 'libmaus2/util/DynamicLoading.cpp' || echo './'`libmaus2/util/DynamicLoading.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/DynamicLoading.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-DynamicLoading.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ConcatRequest.cpp -o libmaus2/util/la-ConcatRequest.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Concat.cpp -o libmaus2/util/la-Concat.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-GetFileSize.lo `test -f 'libmaus2/util/GetFileSize.cpp' || echo './'`libmaus2/util/GetFileSize.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/GetFileSize.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-GetFileSize.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Histogram.lo `test -f 'libmaus2/util/Histogram.cpp' || echo './'`libmaus2/util/Histogram.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/DynamicLoading.cpp -o libmaus2/util/la-DynamicLoading.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Histogram.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Histogram.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-HistogramSet.lo `test -f 'libmaus2/util/HistogramSet.cpp' || echo './'`libmaus2/util/HistogramSet.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/HistogramSet.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-HistogramSet.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-IncreasingList.lo `test -f 'libmaus2/util/IncreasingList.cpp' || echo './'`libmaus2/util/IncreasingList.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/IncreasingList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-IncreasingList.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/HistogramSet.cpp -o libmaus2/util/la-HistogramSet.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Histogram.cpp -o libmaus2/util/la-Histogram.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-IntervalTree.lo `test -f 'libmaus2/util/IntervalTree.cpp' || echo './'`libmaus2/util/IntervalTree.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/IntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-IntervalTree.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/GetFileSize.cpp -o libmaus2/util/la-GetFileSize.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/IncreasingList.cpp -o libmaus2/util/la-IncreasingList.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-GenericIntervalTree.lo `test -f 'libmaus2/util/GenericIntervalTree.cpp' || echo './'`libmaus2/util/GenericIntervalTree.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/GenericIntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-GenericIntervalTree.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/IntervalTree.cpp -o libmaus2/util/la-IntervalTree.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-LogPipe.lo `test -f 'libmaus2/util/LogPipe.cpp' || echo './'`libmaus2/util/LogPipe.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LogPipe.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LogPipe.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/GenericIntervalTree.cpp -o libmaus2/util/la-GenericIntervalTree.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-LogPipeMultiplex.lo `test -f 'libmaus2/util/LogPipeMultiplex.cpp' || echo './'`libmaus2/util/LogPipeMultiplex.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LogPipeMultiplex.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LogPipeMultiplex.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-LogPipeMultiplexGeneric.lo `test -f 'libmaus2/util/LogPipeMultiplexGeneric.cpp' || echo './'`libmaus2/util/LogPipeMultiplexGeneric.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LogPipeMultiplexGeneric.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LogPipeMultiplexGeneric.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LogPipe.cpp -o libmaus2/util/la-LogPipe.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-LookupIntervalTree.lo `test -f 'libmaus2/util/LookupIntervalTree.cpp' || echo './'`libmaus2/util/LookupIntervalTree.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LookupIntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LookupIntervalTree.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LookupIntervalTree.cpp -o libmaus2/util/la-LookupIntervalTree.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LogPipeMultiplexGeneric.cpp -o libmaus2/util/la-LogPipeMultiplexGeneric.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LogPipeMultiplex.cpp -o libmaus2/util/la-LogPipeMultiplex.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-md5_interface.lo `test -f 'libmaus2/digest/md5_interface.cpp' || echo './'`libmaus2/digest/md5_interface.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/md5_interface.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-md5_interface.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-MemLimit.lo `test -f 'libmaus2/util/MemLimit.cpp' || echo './'`libmaus2/util/MemLimit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/MemLimit.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-MemLimit.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/md5_interface.cpp -o libmaus2/digest/la-md5_interface.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/MemLimit.cpp -o libmaus2/util/la-MemLimit.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-MemUsage.lo `test -f 'libmaus2/util/MemUsage.cpp' || echo './'`libmaus2/util/MemUsage.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/MemUsage.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-MemUsage.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-NearestNeighbourDictionary.lo `test -f 'libmaus2/util/NearestNeighbourDictionary.cpp' || echo './'`libmaus2/util/NearestNeighbourDictionary.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-NegativeDifferenceArray32.lo `test -f 'libmaus2/util/NegativeDifferenceArray32.cpp' || echo './'`libmaus2/util/NegativeDifferenceArray32.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/NearestNeighbourDictionary.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-NearestNeighbourDictionary.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/NegativeDifferenceArray32.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-NegativeDifferenceArray32.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-NegativeDifferenceArray64.lo `test -f 'libmaus2/util/NegativeDifferenceArray64.cpp' || echo './'`libmaus2/util/NegativeDifferenceArray64.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/NegativeDifferenceArray64.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-NegativeDifferenceArray64.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/MemUsage.cpp -o libmaus2/util/la-MemUsage.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/NegativeDifferenceArray32.cpp -o libmaus2/util/la-NegativeDifferenceArray32.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/NegativeDifferenceArray64.cpp -o libmaus2/util/la-NegativeDifferenceArray64.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-nstat.lo `test -f 'libmaus2/util/nstat.cpp' || echo './'`libmaus2/util/nstat.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/nstat.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-nstat.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-PositiveDifferenceArray32.lo `test -f 'libmaus2/util/PositiveDifferenceArray32.cpp' || echo './'`libmaus2/util/PositiveDifferenceArray32.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PositiveDifferenceArray32.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PositiveDifferenceArray32.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-PositiveDifferenceArray64.lo `test -f 'libmaus2/util/PositiveDifferenceArray64.cpp' || echo './'`libmaus2/util/PositiveDifferenceArray64.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PositiveDifferenceArray64.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PositiveDifferenceArray64.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/nstat.cpp -o libmaus2/util/la-nstat.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PositiveDifferenceArray32.cpp -o libmaus2/util/la-PositiveDifferenceArray32.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/NearestNeighbourDictionary.cpp -o libmaus2/util/la-NearestNeighbourDictionary.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PositiveDifferenceArray64.cpp -o libmaus2/util/la-PositiveDifferenceArray64.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-PosixExecute.lo `test -f 'libmaus2/util/PosixExecute.cpp' || echo './'`libmaus2/util/PosixExecute.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PosixExecute.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PosixExecute.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-PosixFileDescriptor.lo `test -f 'libmaus2/util/PosixFileDescriptor.cpp' || echo './'`libmaus2/util/PosixFileDescriptor.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PosixFileDescriptor.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PosixFileDescriptor.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PosixFileDescriptor.cpp -o libmaus2/util/la-PosixFileDescriptor.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-PosixInputFile.lo `test -f 'libmaus2/util/PosixInputFile.cpp' || echo './'`libmaus2/util/PosixInputFile.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PosixInputFile.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PosixInputFile.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-SaturatingCounter.lo `test -f 'libmaus2/util/SaturatingCounter.cpp' || echo './'`libmaus2/util/SaturatingCounter.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/SaturatingCounter.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-SaturatingCounter.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PosixInputFile.cpp -o libmaus2/util/la-PosixInputFile.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-StringSerialisation.lo `test -f 'libmaus2/util/StringSerialisation.cpp' || echo './'`libmaus2/util/StringSerialisation.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/StringSerialisation.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-StringSerialisation.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-SuccinctBorderArray.lo `test -f 'libmaus2/util/SuccinctBorderArray.cpp' || echo './'`libmaus2/util/SuccinctBorderArray.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/SuccinctBorderArray.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-SuccinctBorderArray.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/SaturatingCounter.cpp -o libmaus2/util/la-SaturatingCounter.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/SuccinctBorderArray.cpp -o libmaus2/util/la-SuccinctBorderArray.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PosixExecute.cpp -o libmaus2/util/la-PosixExecute.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Terminal.lo `test -f 'libmaus2/util/Terminal.cpp' || echo './'`libmaus2/util/Terminal.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Terminal.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Terminal.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Terminal.cpp -o libmaus2/util/la-Terminal.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-OctetString.lo `test -f 'libmaus2/util/OctetString.cpp' || echo './'`libmaus2/util/OctetString.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/OctetString.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-OctetString.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/StringSerialisation.cpp -o libmaus2/util/la-StringSerialisation.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Utf8String.lo `test -f 'libmaus2/util/Utf8String.cpp' || echo './'`libmaus2/util/Utf8String.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8String.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8String.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Utf8BlockIndexDecoder.lo `test -f 'libmaus2/util/Utf8BlockIndexDecoder.cpp' || echo './'`libmaus2/util/Utf8BlockIndexDecoder.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8BlockIndexDecoder.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8BlockIndexDecoder.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8BlockIndexDecoder.cpp -o libmaus2/util/la-Utf8BlockIndexDecoder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Utf8BlockIndex.lo `test -f 'libmaus2/util/Utf8BlockIndex.cpp' || echo './'`libmaus2/util/Utf8BlockIndex.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8BlockIndex.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8BlockIndex.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Utf8DecoderBuffer.lo `test -f 'libmaus2/util/Utf8DecoderBuffer.cpp' || echo './'`libmaus2/util/Utf8DecoderBuffer.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8DecoderBuffer.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8DecoderBuffer.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/OctetString.cpp -o libmaus2/util/la-OctetString.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8DecoderBuffer.cpp -o libmaus2/util/la-Utf8DecoderBuffer.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8BlockIndex.cpp -o libmaus2/util/la-Utf8BlockIndex.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8String.cpp -o libmaus2/util/la-Utf8String.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Utf8DecoderWrapper.lo `test -f 'libmaus2/util/Utf8DecoderWrapper.cpp' || echo './'`libmaus2/util/Utf8DecoderWrapper.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8DecoderWrapper.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8DecoderWrapper.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-AlignmentValidity.lo `test -f 'libmaus2/bambam/AlignmentValidity.cpp' || echo './'`libmaus2/bambam/AlignmentValidity.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/AlignmentValidity.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-AlignmentValidity.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/AlignmentValidity.cpp -o libmaus2/bambam/la-AlignmentValidity.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamFlagBase.lo `test -f 'libmaus2/bambam/BamFlagBase.cpp' || echo './'`libmaus2/bambam/BamFlagBase.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamFlagBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamFlagBase.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8DecoderWrapper.cpp -o libmaus2/util/la-Utf8DecoderWrapper.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamFlagBase.cpp -o libmaus2/bambam/la-BamFlagBase.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-ReadGroup.lo `test -f 'libmaus2/bambam/ReadGroup.cpp' || echo './'`libmaus2/bambam/ReadGroup.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadGroup.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadGroup.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-DuplicationMetrics.lo `test -f 'libmaus2/bambam/DuplicationMetrics.cpp' || echo './'`libmaus2/bambam/DuplicationMetrics.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/DuplicationMetrics.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-DuplicationMetrics.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadGroup.cpp -o libmaus2/bambam/la-ReadGroup.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamDefaultAdapters.lo `test -f 'libmaus2/bambam/BamDefaultAdapters.cpp' || echo './'`libmaus2/bambam/BamDefaultAdapters.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamDefaultAdapters.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamDefaultAdapters.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamDefaultAdapters.cpp -o libmaus2/bambam/la-BamDefaultAdapters.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/DuplicationMetrics.cpp -o libmaus2/bambam/la-DuplicationMetrics.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamRange.lo `test -f 'libmaus2/bambam/BamRange.cpp' || echo './'`libmaus2/bambam/BamRange.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamRange.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamRange.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/graph/la-GraphEdge.lo `test -f 'libmaus2/graph/GraphEdge.cpp' || echo './'`libmaus2/graph/GraphEdge.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/graph/GraphEdge.cpp -fPIC -DPIC -o libmaus2/graph/.libs/la-GraphEdge.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamIndexBinChunk.lo `test -f 'libmaus2/bambam/BamIndexBinChunk.cpp' || echo './'`libmaus2/bambam/BamIndexBinChunk.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamIndexBinChunk.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamIndexBinChunk.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamIndexBinChunk.cpp -o libmaus2/bambam/la-BamIndexBinChunk.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamIndexLinearChunk.lo `test -f 'libmaus2/bambam/BamIndexLinearChunk.cpp' || echo './'`libmaus2/bambam/BamIndexLinearChunk.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamIndexLinearChunk.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamIndexLinearChunk.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/graph/GraphEdge.cpp -o libmaus2/graph/la-GraphEdge.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamIndexLinearChunk.cpp -o libmaus2/bambam/la-BamIndexLinearChunk.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/huffman/la-HuffmanTree.lo `test -f 'libmaus2/huffman/HuffmanTree.cpp' || echo './'`libmaus2/huffman/HuffmanTree.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/HuffmanTree.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-HuffmanTree.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignmentDecoderInfo.lo `test -f 'libmaus2/bambam/BamAlignmentDecoderInfo.cpp' || echo './'`libmaus2/bambam/BamAlignmentDecoderInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderInfo.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignmentDecoderInfo.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderInfo.cpp -o libmaus2/bambam/la-BamAlignmentDecoderInfo.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/HuffmanTree.cpp -o libmaus2/huffman/la-HuffmanTree.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-Lz4Base.lo `test -f 'libmaus2/lz/Lz4Base.cpp' || echo './'`libmaus2/lz/Lz4Base.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4Base.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4Base.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4Base.cpp -o libmaus2/lz/la-Lz4Base.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-Lz4Compress.lo `test -f 'libmaus2/lz/Lz4Compress.cpp' || echo './'`libmaus2/lz/Lz4Compress.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4Compress.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4Compress.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-Lz4DecoderBuffer.lo `test -f 'libmaus2/lz/Lz4DecoderBuffer.cpp' || echo './'`libmaus2/lz/Lz4DecoderBuffer.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4DecoderBuffer.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4DecoderBuffer.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamRange.cpp -o libmaus2/bambam/la-BamRange.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4DecoderBuffer.cpp -o libmaus2/lz/la-Lz4DecoderBuffer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c -o libmaus2/lz/la-lz4.lo `test -f 'libmaus2/lz/lz4.c' || echo './'`libmaus2/lz/lz4.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/lz/lz4.c -fPIC -DPIC -o libmaus2/lz/.libs/la-lz4.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4Compress.cpp -o libmaus2/lz/la-Lz4Compress.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fm/la-BidirectionalIndexInterval.lo `test -f 'libmaus2/fm/BidirectionalIndexInterval.cpp' || echo './'`libmaus2/fm/BidirectionalIndexInterval.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexInterval.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-BidirectionalIndexInterval.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexInterval.cpp -o libmaus2/fm/la-BidirectionalIndexInterval.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.lo `test -f 'libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp' || echo './'`libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-BidirectionalIndexIntervalSymbol.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/lz/lz4.c -o libmaus2/lz/la-lz4.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp -o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-FastALineParserLineInfo.lo `test -f 'libmaus2/fastx/FastALineParserLineInfo.cpp' || echo './'`libmaus2/fastx/FastALineParserLineInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastALineParserLineInfo.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastALineParserLineInfo.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastALineParserLineInfo.cpp -o libmaus2/fastx/la-FastALineParserLineInfo.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-FastAMatchTable.lo `test -f 'libmaus2/fastx/FastAMatchTable.cpp' || echo './'`libmaus2/fastx/FastAMatchTable.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAMatchTable.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAMatchTable.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-EditDistanceResult.lo `test -f 'libmaus2/lcs/EditDistanceResult.cpp' || echo './'`libmaus2/lcs/EditDistanceResult.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/EditDistanceResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-EditDistanceResult.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-FastABgzfIndexEntry.lo `test -f 'libmaus2/fastx/FastABgzfIndexEntry.cpp' || echo './'`libmaus2/fastx/FastABgzfIndexEntry.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndexEntry.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastABgzfIndexEntry.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAMatchTable.cpp -o libmaus2/fastx/la-FastAMatchTable.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/EditDistanceResult.cpp -o libmaus2/lcs/la-EditDistanceResult.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-FastABgzfIndex.lo `test -f 'libmaus2/fastx/FastABgzfIndex.cpp' || echo './'`libmaus2/fastx/FastABgzfIndex.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndex.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastABgzfIndex.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-RAZFIndex.lo `test -f 'libmaus2/lz/RAZFIndex.cpp' || echo './'`libmaus2/lz/RAZFIndex.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/RAZFIndex.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-RAZFIndex.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndexEntry.cpp -o libmaus2/fastx/la-FastABgzfIndexEntry.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-FastAIndexEntry.lo `test -f 'libmaus2/fastx/FastAIndexEntry.cpp' || echo './'`libmaus2/fastx/FastAIndexEntry.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAIndexEntry.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAIndexEntry.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/RAZFIndex.cpp -o libmaus2/lz/la-RAZFIndex.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-FastAIndex.lo `test -f 'libmaus2/fastx/FastAIndex.cpp' || echo './'`libmaus2/fastx/FastAIndex.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAIndex.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAIndex.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndex.cpp -o libmaus2/fastx/la-FastABgzfIndex.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAIndexEntry.cpp -o libmaus2/fastx/la-FastAIndexEntry.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/network/la-HttpAbsoluteUrl.lo `test -f 'libmaus2/network/HttpAbsoluteUrl.cpp' || echo './'`libmaus2/network/HttpAbsoluteUrl.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/network/HttpAbsoluteUrl.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-HttpAbsoluteUrl.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-IGzipDeflate.lo `test -f 'libmaus2/lz/IGzipDeflate.cpp' || echo './'`libmaus2/lz/IGzipDeflate.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/network/HttpAbsoluteUrl.cpp -o libmaus2/network/la-HttpAbsoluteUrl.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-LocalBaseConstants.lo `test -f 'libmaus2/lcs/LocalBaseConstants.cpp' || echo './'`libmaus2/lcs/LocalBaseConstants.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/IGzipDeflate.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-IGzipDeflate.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/IGzipDeflate.cpp -o libmaus2/lz/la-IGzipDeflate.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/LocalBaseConstants.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-LocalBaseConstants.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-LocalEditDistanceResult.lo `test -f 'libmaus2/lcs/LocalEditDistanceResult.cpp' || echo './'`libmaus2/lcs/LocalEditDistanceResult.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/LocalEditDistanceResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-LocalEditDistanceResult.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAIndex.cpp -o libmaus2/fastx/la-FastAIndex.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/LocalBaseConstants.cpp -o libmaus2/lcs/la-LocalBaseConstants.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/LocalEditDistanceResult.cpp -o libmaus2/lcs/la-LocalEditDistanceResult.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamHeaderParserStateBase.lo `test -f 'libmaus2/bambam/BamHeaderParserStateBase.cpp' || echo './'`libmaus2/bambam/BamHeaderParserStateBase.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamHeaderParserStateBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamHeaderParserStateBase.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-GeneFlatFile.lo `test -f 'libmaus2/bambam/GeneFlatFile.cpp' || echo './'`libmaus2/bambam/GeneFlatFile.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/GeneFlatFile.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-GeneFlatFile.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-GeneFlatFileEntry.lo `test -f 'libmaus2/bambam/GeneFlatFileEntry.cpp' || echo './'`libmaus2/bambam/GeneFlatFileEntry.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/GeneFlatFileEntry.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-GeneFlatFileEntry.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/GeneFlatFileEntry.cpp -o libmaus2/bambam/la-GeneFlatFileEntry.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/network/la-GnuTLSInit.lo `test -f 'libmaus2/network/GnuTLSInit.cpp' || echo './'`libmaus2/network/GnuTLSInit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/network/GnuTLSInit.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-GnuTLSInit.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/network/la-GnuTLSSocket.lo `test -f 'libmaus2/network/GnuTLSSocket.cpp' || echo './'`libmaus2/network/GnuTLSSocket.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/network/GnuTLSSocket.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-GnuTLSSocket.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/network/GnuTLSInit.cpp -o libmaus2/network/la-GnuTLSInit.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/network/GnuTLSSocket.cpp -o libmaus2/network/la-GnuTLSSocket.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.lo `test -f 'libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp' || echo './'`libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamStreamingMarkDuplicatesSupport.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamHeaderParserStateBase.cpp -o libmaus2/bambam/la-BamHeaderParserStateBase.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-SamInfoBase.lo `test -f 'libmaus2/bambam/SamInfoBase.cpp' || echo './'`libmaus2/bambam/SamInfoBase.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/SamInfoBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-SamInfoBase.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/GeneFlatFile.cpp -o libmaus2/bambam/la-GeneFlatFile.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/SamInfoBase.cpp -o libmaus2/bambam/la-SamInfoBase.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-SHA1.lo `test -f 'libmaus2/digest/SHA1.cpp' || echo './'`libmaus2/digest/SHA1.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA1.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA1.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA1.cpp -o libmaus2/digest/la-SHA1.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_224.lo `test -f 'libmaus2/digest/SHA2_224.cpp' || echo './'`libmaus2/digest/SHA2_224.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_224.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_224.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_256.lo `test -f 'libmaus2/digest/SHA2_256.cpp' || echo './'`libmaus2/digest/SHA2_256.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_256.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_256.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_384.lo `test -f 'libmaus2/digest/SHA2_384.cpp' || echo './'`libmaus2/digest/SHA2_384.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_384.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_384.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_224.cpp -o libmaus2/digest/la-SHA2_224.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp -o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_256.cpp -o libmaus2/digest/la-SHA2_256.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_384.cpp -o libmaus2/digest/la-SHA2_384.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_512.lo `test -f 'libmaus2/digest/SHA2_512.cpp' || echo './'`libmaus2/digest/SHA2_512.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_512.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_512.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-CRC32.lo `test -f 'libmaus2/digest/CRC32.cpp' || echo './'`libmaus2/digest/CRC32.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-CRC32C_Core.lo `test -f 'libmaus2/digest/CRC32C_Core.cpp' || echo './'`libmaus2/digest/CRC32C_Core.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32C_Core.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32C_Core.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_512.cpp -o libmaus2/digest/la-SHA2_512.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32C_Core.cpp -o libmaus2/digest/la-CRC32C_Core.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-CRC32C.lo `test -f 'libmaus2/digest/CRC32C.cpp' || echo './'`libmaus2/digest/CRC32C.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32C.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32C.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32.cpp -o libmaus2/digest/la-CRC32.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-CRC32_Core.lo `test -f 'libmaus2/digest/CRC32_Core.cpp' || echo './'`libmaus2/digest/CRC32_Core.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32_Core.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32_Core.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32C.cpp -o libmaus2/digest/la-CRC32C.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32_Core.cpp -o libmaus2/digest/la-CRC32_Core.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-NameInfoBase.lo `test -f 'libmaus2/fastx/NameInfoBase.cpp' || echo './'`libmaus2/fastx/NameInfoBase.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/NameInfoBase.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-NameInfoBase.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/NameInfoBase.cpp -o libmaus2/fastx/la-NameInfoBase.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/parallel/la-RefIdInterval.lo `test -f 'libmaus2/bambam/parallel/RefIdInterval.cpp' || echo './'`libmaus2/bambam/parallel/RefIdInterval.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/parallel/RefIdInterval.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-RefIdInterval.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-RefPathToken.lo `test -f 'libmaus2/fastx/RefPathToken.cpp' || echo './'`libmaus2/fastx/RefPathToken.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/RefPathToken.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-RefPathToken.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/parallel/RefIdInterval.cpp -o libmaus2/bambam/parallel/la-RefIdInterval.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-RefPathTokenVector.lo `test -f 'libmaus2/fastx/RefPathTokenVector.cpp' || echo './'`libmaus2/fastx/RefPathTokenVector.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/RefPathTokenVector.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-RefPathTokenVector.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/RefPathToken.cpp -o libmaus2/fastx/la-RefPathToken.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-AlignmentStatistics.lo `test -f 'libmaus2/lcs/AlignmentStatistics.cpp' || echo './'`libmaus2/lcs/AlignmentStatistics.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignmentStatistics.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-AlignmentStatistics.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-SingleWordDNABitBuffer.lo `test -f 'libmaus2/fastx/SingleWordDNABitBuffer.cpp' || echo './'`libmaus2/fastx/SingleWordDNABitBuffer.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/RefPathTokenVector.cpp -o libmaus2/fastx/la-RefPathTokenVector.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/SingleWordDNABitBuffer.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-SingleWordDNABitBuffer.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.lo `test -f 'libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp' || echo './'`libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LongestIncreasingSubsequenceExtendedResult.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/SingleWordDNABitBuffer.cpp -o libmaus2/fastx/la-SingleWordDNABitBuffer.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignmentStatistics.cpp -o libmaus2/lcs/la-AlignmentStatistics.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-AlignerFactory.lo `test -f 'libmaus2/lcs/AlignerFactory.cpp' || echo './'`libmaus2/lcs/AlignerFactory.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignerFactory.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-AlignerFactory.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp -o libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-BandedAlignerFactory.lo `test -f 'libmaus2/lcs/BandedAlignerFactory.cpp' || echo './'`libmaus2/lcs/BandedAlignerFactory.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/BandedAlignerFactory.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-BandedAlignerFactory.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-DalignerNP.lo `test -f 'libmaus2/lcs/DalignerNP.cpp' || echo './'`libmaus2/lcs/DalignerNP.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-OutputStreamInstance.lo `test -f 'libmaus2/aio/OutputStreamInstance.cpp' || echo './'`libmaus2/aio/OutputStreamInstance.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/DalignerNP.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-DalignerNP.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/OutputStreamInstance.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-OutputStreamInstance.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/DalignerNP.cpp -o libmaus2/lcs/la-DalignerNP.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/OutputStreamInstance.cpp -o libmaus2/aio/la-OutputStreamInstance.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/BandedAlignerFactory.cpp -o libmaus2/lcs/la-BandedAlignerFactory.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-OutputStreamFactoryContainer.lo `test -f 'libmaus2/aio/OutputStreamFactoryContainer.cpp' || echo './'`libmaus2/aio/OutputStreamFactoryContainer.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/OutputStreamFactoryContainer.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-OutputStreamFactoryContainer.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TraceBlock.lo `test -f 'libmaus2/dazzler/align/TraceBlock.cpp' || echo './'`libmaus2/dazzler/align/TraceBlock.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TraceBlock.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TraceBlock.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TraceBlock.cpp -o libmaus2/dazzler/align/la-TraceBlock.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-ApproximateRun.lo `test -f 'libmaus2/dazzler/align/ApproximateRun.cpp' || echo './'`libmaus2/dazzler/align/ApproximateRun.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/ApproximateRun.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-ApproximateRun.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/ApproximateRun.cpp -o libmaus2/dazzler/align/la-ApproximateRun.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignerFactory.cpp -o libmaus2/lcs/la-AlignerFactory.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.lo `test -f 'libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp' || echo './'`libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp -fPIC -DPIC -o libmaus2/suffixsort/.libs/la-BwtMergeBlockSortRequest.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapMeta.lo `test -f 'libmaus2/dazzler/align/OverlapMeta.cpp' || echo './'`libmaus2/dazzler/align/OverlapMeta.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapMeta.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapMeta.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/OutputStreamFactoryContainer.cpp -o libmaus2/aio/la-OutputStreamFactoryContainer.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapMeta.cpp -o libmaus2/dazzler/align/la-OverlapMeta.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-DalignerLocalAlignment.lo `test -f 'libmaus2/lcs/DalignerLocalAlignment.cpp' || echo './'`libmaus2/lcs/DalignerLocalAlignment.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/DalignerLocalAlignment.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-DalignerLocalAlignment.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-Tandem.lo `test -f 'libmaus2/dazzler/align/Tandem.cpp' || echo './'`libmaus2/dazzler/align/Tandem.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/Tandem.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-Tandem.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/DalignerLocalAlignment.cpp -o libmaus2/lcs/la-DalignerLocalAlignment.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TandemVector.lo `test -f 'libmaus2/dazzler/align/TandemVector.cpp' || echo './'`libmaus2/dazzler/align/TandemVector.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TandemVector.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TandemVector.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/Tandem.cpp -o libmaus2/dazzler/align/la-Tandem.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp -o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TandemVector.cpp -o libmaus2/dazzler/align/la-TandemVector.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/math/la-GmpInteger.lo `test -f 'libmaus2/math/GmpInteger.cpp' || echo './'`libmaus2/math/GmpInteger.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/math/la-GmpFloat.lo `test -f 'libmaus2/math/GmpFloat.cpp' || echo './'`libmaus2/math/GmpFloat.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/math/GmpInteger.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-GmpInteger.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/math/GmpFloat.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-GmpFloat.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/math/GmpInteger.cpp -o libmaus2/math/la-GmpInteger.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/math/GmpFloat.cpp -o libmaus2/math/la-GmpFloat.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TracePoint.lo `test -f 'libmaus2/dazzler/align/TracePoint.cpp' || echo './'`libmaus2/dazzler/align/TracePoint.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TracePoint.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TracePoint.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TracePoint.cpp -o libmaus2/dazzler/align/la-TracePoint.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-XzDecoder.lo `test -f 'libmaus2/lz/XzDecoder.cpp' || echo './'`libmaus2/lz/XzDecoder.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/XzDecoder.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-XzDecoder.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-ArgParser.lo `test -f 'libmaus2/util/ArgParser.cpp' || echo './'`libmaus2/util/ArgParser.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-FragmentEnvelopeYScore.lo `test -f 'libmaus2/lcs/FragmentEnvelopeYScore.cpp' || echo './'`libmaus2/lcs/FragmentEnvelopeYScore.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ArgParser.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ArgParser.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/FragmentEnvelopeYScore.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-FragmentEnvelopeYScore.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/FragmentEnvelopeYScore.cpp -o libmaus2/lcs/la-FragmentEnvelopeYScore.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-FragmentEnvelopeFragment.lo `test -f 'libmaus2/lcs/FragmentEnvelopeFragment.cpp' || echo './'`libmaus2/lcs/FragmentEnvelopeFragment.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/FragmentEnvelopeFragment.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-FragmentEnvelopeFragment.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/FragmentEnvelopeFragment.cpp -o libmaus2/lcs/la-FragmentEnvelopeFragment.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ArgParser.cpp -o libmaus2/util/la-ArgParser.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataSequence.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataSequence.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataSequence.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataSequence.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataSequence.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/XzDecoder.cpp -o libmaus2/lz/la-XzDecoder.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataSequence.cpp -o libmaus2/fastx/la-DNAIndexMetaDataSequence.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaData.lo `test -f 'libmaus2/fastx/DNAIndexMetaData.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaData.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaData.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaData.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-PileVectorElement.lo `test -f 'libmaus2/bambam/PileVectorElement.cpp' || echo './'`libmaus2/bambam/PileVectorElement.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/PileVectorElement.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-PileVectorElement.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-SHA3_256.lo `test -f 'libmaus2/digest/SHA3_256.cpp' || echo './'`libmaus2/digest/SHA3_256.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA3_256.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA3_256.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/PileVectorElement.cpp -o libmaus2/bambam/la-PileVectorElement.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaData.cpp -o libmaus2/fastx/la-DNAIndexMetaData.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataBigBand.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataBigBand.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataBigBand.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBand.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBand.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBandBiDir.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA3_256.cpp -o libmaus2/digest/la-SHA3_256.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBand.cpp -o libmaus2/fastx/la-DNAIndexMetaDataBigBand.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-EnvelopeFragment.lo `test -f 'libmaus2/lcs/EnvelopeFragment.cpp' || echo './'`libmaus2/lcs/EnvelopeFragment.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/EnvelopeFragment.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-EnvelopeFragment.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp -o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/EnvelopeFragment.cpp -o libmaus2/lcs/la-EnvelopeFragment.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/rank/la-DNARankBiDirRange.lo `test -f 'libmaus2/rank/DNARankBiDirRange.cpp' || echo './'`libmaus2/rank/DNARankBiDirRange.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-NNPTraceElement.lo `test -f 'libmaus2/lcs/NNPTraceElement.cpp' || echo './'`libmaus2/lcs/NNPTraceElement.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/DNARankBiDirRange.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-DNARankBiDirRange.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPTraceElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPTraceElement.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/DNARankBiDirRange.cpp -o libmaus2/rank/la-DNARankBiDirRange.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-NNPTraceContainer.lo `test -f 'libmaus2/lcs/NNPTraceContainer.cpp' || echo './'`libmaus2/lcs/NNPTraceContainer.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-NNPAlignResult.lo `test -f 'libmaus2/lcs/NNPAlignResult.cpp' || echo './'`libmaus2/lcs/NNPAlignResult.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPTraceContainer.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPTraceContainer.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPTraceElement.cpp -o libmaus2/lcs/la-NNPTraceElement.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPAlignResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPAlignResult.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-FastAToCompact4BigBand.lo `test -f 'libmaus2/fastx/FastAToCompact4BigBand.cpp' || echo './'`libmaus2/fastx/FastAToCompact4BigBand.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAToCompact4BigBand.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAToCompact4BigBand.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSortResult.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPAlignResult.cpp -o libmaus2/lcs/la-NNPAlignResult.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-HugePages.lo `test -f 'libmaus2/util/HugePages.cpp' || echo './'`libmaus2/util/HugePages.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPTraceContainer.cpp -o libmaus2/lcs/la-NNPTraceContainer.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/HugePages.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-HugePages.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-ZlibInterface.lo `test -f 'libmaus2/lz/ZlibInterface.cpp' || echo './'`libmaus2/lz/ZlibInterface.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/ZlibInterface.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-ZlibInterface.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/ZlibInterface.cpp -o libmaus2/lz/la-ZlibInterface.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/HugePages.cpp -o libmaus2/util/la-HugePages.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAToCompact4BigBand.cpp -o libmaus2/fastx/la-FastAToCompact4BigBand.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtSelectSSA.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-FileRemoval.lo `test -f 'libmaus2/aio/FileRemoval.cpp' || echo './'`libmaus2/aio/FileRemoval.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/FileRemoval.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-FileRemoval.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/FileRemoval.cpp -o libmaus2/aio/la-FileRemoval.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/rank/la-DNARankMEM.lo `test -f 'libmaus2/rank/DNARankMEM.cpp' || echo './'`libmaus2/rank/DNARankMEM.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/DNARankMEM.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-DNARankMEM.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/DNARankMEM.cpp -o libmaus2/rank/la-DNARankMEM.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainAddQueueElement.lo `test -f 'libmaus2/lcs/ChainAddQueueElement.cpp' || echo './'`libmaus2/lcs/ChainAddQueueElement.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainAddQueueElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainAddQueueElement.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-Chain.lo `test -f 'libmaus2/lcs/Chain.cpp' || echo './'`libmaus2/lcs/Chain.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/Chain.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-Chain.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainAddQueueElement.cpp -o libmaus2/lcs/la-ChainAddQueueElement.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainNode.lo `test -f 'libmaus2/lcs/ChainNode.cpp' || echo './'`libmaus2/lcs/ChainNode.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainNode.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainNode.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/Chain.cpp -o libmaus2/lcs/la-Chain.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainNode.cpp -o libmaus2/lcs/la-ChainNode.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainNodeInfo.lo `test -f 'libmaus2/lcs/ChainNodeInfo.cpp' || echo './'`libmaus2/lcs/ChainNodeInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainNodeInfo.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainNodeInfo.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainRemoveQueueElement.lo `test -f 'libmaus2/lcs/ChainRemoveQueueElement.cpp' || echo './'`libmaus2/lcs/ChainRemoveQueueElement.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainNodeInfo.cpp -o libmaus2/lcs/la-ChainNodeInfo.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainRemoveQueueElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainRemoveQueueElement.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainSplayTreeNode.lo `test -f 'libmaus2/lcs/ChainSplayTreeNode.cpp' || echo './'`libmaus2/lcs/ChainSplayTreeNode.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainRemoveQueueElement.cpp -o libmaus2/lcs/la-ChainRemoveQueueElement.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainSplayTreeNode.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainSplayTreeNode.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-PosixFdOutputStreamFactory.lo `test -f 'libmaus2/aio/PosixFdOutputStreamFactory.cpp' || echo './'`libmaus2/aio/PosixFdOutputStreamFactory.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainSplayTreeNode.cpp -o libmaus2/lcs/la-ChainSplayTreeNode.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/PosixFdOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-PosixFdOutputStreamFactory.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapHeader.lo `test -f 'libmaus2/dazzler/align/OverlapHeader.cpp' || echo './'`libmaus2/dazzler/align/OverlapHeader.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapHeader.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapHeader.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapHeader.cpp -o libmaus2/dazzler/align/la-OverlapHeader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignment.lo `test -f 'libmaus2/bambam/BamAlignment.cpp' || echo './'`libmaus2/bambam/BamAlignment.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignment.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignment.o In file included from ./libmaus2/rank/ChooseCache.hpp:23, from ./libmaus2/rank/CodeBase.hpp:23, from ./libmaus2/rank/EncodeCache.hpp:23, from ./libmaus2/rank/ERankBase.hpp:24, from ./libmaus2/rank/ImpCacheLineRank.hpp:24, from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23, from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24, from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::huffman::IndexEntry; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/PosixFdOutputStreamFactory.cpp -o libmaus2/aio/la-PosixFdOutputStreamFactory.o >/dev/null 2>&1 In file included from ./libmaus2/lz/StreamWrapperBuffer.hpp:23, from ./libmaus2/lz/StreamWrapper.hpp:22, from ./libmaus2/aio/PosixFdInput.hpp:41, from ./libmaus2/aio/PosixFdInputWrapper.hpp:22, from ./libmaus2/aio/PosixFdInputStream.hpp:22, from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23, from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23, from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21, from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::huffman::IndexEntry; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = IsaTriple; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.lo `test -f 'libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeInput.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignment.cpp -o libmaus2/bambam/la-BamAlignment.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Command.lo `test -f 'libmaus2/util/Command.cpp' || echo './'`libmaus2/util/Command.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Command.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Command.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Command.cpp -o libmaus2/util/la-Command.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-CommandContainer.lo `test -f 'libmaus2/util/CommandContainer.cpp' || echo './'`libmaus2/util/CommandContainer.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/CommandContainer.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-CommandContainer.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/CommandContainer.cpp -o libmaus2/util/la-CommandContainer.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-InputOutputStreamInstance.lo `test -f 'libmaus2/aio/InputOutputStreamInstance.cpp' || echo './'`libmaus2/aio/InputOutputStreamInstance.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/InputOutputStreamInstance.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-InputOutputStreamInstance.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/InputOutputStreamInstance.cpp -o libmaus2/aio/la-InputOutputStreamInstance.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapInfo.lo `test -f 'libmaus2/dazzler/align/OverlapInfo.cpp' || echo './'`libmaus2/dazzler/align/OverlapInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapInfo.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapInfo.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapInfo.cpp -o libmaus2/dazzler/align/la-OverlapInfo.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapDataInterface.lo `test -f 'libmaus2/dazzler/align/OverlapDataInterface.cpp' || echo './'`libmaus2/dazzler/align/OverlapDataInterface.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-PathTools.lo `test -f 'libmaus2/util/PathTools.cpp' || echo './'`libmaus2/util/PathTools.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapDataInterface.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapDataInterface.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PathTools.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PathTools.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapDataInterface.cpp -o libmaus2/dazzler/align/la-OverlapDataInterface.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PathTools.cpp -o libmaus2/util/la-PathTools.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentConstants128.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentConstants128.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants128.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants128.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_8.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_8.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_8.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_16.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_16.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_16.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.lo `test -f 'libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp' || echo './'`libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbitbtree-testbitbtree.o `test -f 'test/testbitbtree.cpp' || echo './'`test/testbitbtree.cpp libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp: In member function ‘virtual void libmaus2::lcs::AlignmentOneAgainstManyAVX2::process(const uint8_t*, const uint8_t*, const std::pair*, uint64_t, libmaus2::autoarray::AutoArray&)’: libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:344:18: warning: unused parameter ‘qa’ [-Wunused-parameter] 344 | uint8_t const * qa, | ~~~~~~~~~~~~~~~~^~ libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:345:18: warning: unused parameter ‘qe’ [-Wunused-parameter] 345 | uint8_t const * qe, | ~~~~~~~~~~~~~~~~^~ libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:346:46: warning: unused parameter ‘MA’ [-Wunused-parameter] 346 | std::pair const * MA, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp -o libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o >/dev/null 2>&1 g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testBitIO-testBitIO.o `test -f 'test/testBitIO.cpp' || echo './'`test/testBitIO.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbtree-testbtree.o `test -f 'test/testbtree.cpp' || echo './'`test/testbtree.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testBWTDyn-testBWTDyn.o `test -f 'test/testBWTDyn.cpp' || echo './'`test/testBWTDyn.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testBWTHufDyn-testBWTHufDyn.o `test -f 'test/testBWTHufDyn.cpp' || echo './'`test/testBWTHufDyn.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testDivSufSort-testDivSufSort.o `test -f 'test/testDivSufSort.cpp' || echo './'`test/testDivSufSort.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testDNABitWords-testDNABitWords.o `test -f 'test/testDNABitWords.cpp' || echo './'`test/testDNABitWords.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testFastRead-testFastRead.o `test -f 'test/testFastRead.cpp' || echo './'`test/testFastRead.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testHuffman-testHuffman.o `test -f 'test/testHuffman.cpp' || echo './'`test/testHuffman.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testIsa-testIsa.o `test -f 'test/testIsa.cpp' || echo './'`test/testIsa.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testkmp-testkmp.o `test -f 'test/testkmp.cpp' || echo './'`test/testkmp.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlz-testlz.o `test -f 'test/testlz.cpp' || echo './'`test/testlz.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testOS-testOS.o `test -f 'test/testOS.cpp' || echo './'`test/testOS.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testRank-testRank.o `test -f 'test/testRank.cpp' || echo './'`test/testRank.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testToWaveletTreeBits-testToWaveletTreeBits.o `test -f 'test/testToWaveletTreeBits.cpp' || echo './'`test/testToWaveletTreeBits.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testWaveletExternal-testWaveletExternal.o `test -f 'test/testWaveletExternal.cpp' || echo './'`test/testWaveletExternal.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testTrie-testTrie.o `test -f 'test/testTrie.cpp' || echo './'`test/testTrie.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbandedlcs-testbandedlcs.o `test -f 'test/testbandedlcs.cpp' || echo './'`test/testbandedlcs.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamwriter-testbamwriter.o `test -f 'test/testbamwriter.cpp' || echo './'`test/testbamwriter.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testhashlcs-testhashlcs.o `test -f 'test/testhashlcs.cpp' || echo './'`test/testhashlcs.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testarraydecode-testarraydecode.o `test -f 'test/testarraydecode.cpp' || echo './'`test/testarraydecode.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsnappy-testsnappy.o `test -f 'test/testsnappy.cpp' || echo './'`test/testsnappy.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsnappyconcat-testsnappyconcat.o `test -f 'test/testsnappyconcat.cpp' || echo './'`test/testsnappyconcat.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testgunzip-testgunzip.o `test -f 'test/testgunzip.cpp' || echo './'`test/testgunzip.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testregex-testregex.o `test -f 'test/testregex.cpp' || echo './'`test/testregex.cpp In file included from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23, from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23, from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22, from ./libmaus2/bambam/BamWriter.hpp:22, from test/testbamwriter.cpp:19: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::bambam::BamIndexBinChunk; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testhashcollisions-testhashcollisions.o `test -f 'test/testhashcollisions.cpp' || echo './'`test/testhashcollisions.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsimplebloomcollisions-testsimplebloomcollisions.o `test -f 'test/testsimplebloomcollisions.cpp' || echo './'`test/testsimplebloomcollisions.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsimplehash-testsimplehash.o `test -f 'test/testsimplehash.cpp' || echo './'`test/testsimplehash.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsimplecountinghash-testsimplecountinghash.o `test -f 'test/testsimplecountinghash.cpp' || echo './'`test/testsimplecountinghash.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsyncreorderset-testsyncreorderset.o `test -f 'test/testsyncreorderset.cpp' || echo './'`test/testsyncreorderset.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testcachealignedalloc-testcachealignedalloc.o `test -f 'test/testcachealignedalloc.cpp' || echo './'`test/testcachealignedalloc.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testblocksynchronous-testblocksynchronous.o `test -f 'test/testblocksynchronous.cpp' || echo './'`test/testblocksynchronous.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsyncfastreaderbase-testsyncfastreaderbase.o `test -f 'test/testsyncfastreaderbase.cpp' || echo './'`test/testsyncfastreaderbase.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdl-testdl.o `test -f 'test/testdl.cpp' || echo './'`test/testdl.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdifenc-testdifenc.o `test -f 'test/testdifenc.cpp' || echo './'`test/testdifenc.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbwtmergeinternal-testbwtmergeinternal.o `test -f 'test/testbwtmergeinternal.cpp' || echo './'`test/testbwtmergeinternal.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastarewrite-testfastarewrite.o `test -f 'test/testfastarewrite.cpp' || echo './'`test/testfastarewrite.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastarecode-testfastarecode.o `test -f 'test/testfastarecode.cpp' || echo './'`test/testfastarecode.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamtofastq-testbamtofastq.o `test -f 'test/testbamtofastq.cpp' || echo './'`test/testbamtofastq.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamrange-testbamrange.o `test -f 'test/testbamrange.cpp' || echo './'`test/testbamrange.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamdamage-testbamdamage.o `test -f 'test/testbamdamage.cpp' || echo './'`test/testbamdamage.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testgamma-testgamma.o `test -f 'test/testgamma.cpp' || echo './'`test/testgamma.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testcompact-testcompact.o `test -f 'test/testcompact.cpp' || echo './'`test/testcompact.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbytetocompact-testbytetocompact.o `test -f 'test/testbytetocompact.cpp' || echo './'`test/testbytetocompact.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testscramtosam-testscramtosam.o `test -f 'test/testscramtosam.cpp' || echo './'`test/testscramtosam.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testpacdecode-testpacdecode.o `test -f 'test/testpacdecode.cpp' || echo './'`test/testpacdecode.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testutf8split-testutf8split.o `test -f 'test/testutf8split.cpp' || echo './'`test/testutf8split.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testcirchash-testcirchash.o `test -f 'test/testcirchash.cpp' || echo './'`test/testcirchash.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testrmmtree-testrmmtree.o `test -f 'test/testrmmtree.cpp' || echo './'`test/testrmmtree.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testcst-testcst.o `test -f 'test/testcst.cpp' || echo './'`test/testcst.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamcmp-testbamcmp.o `test -f 'test/testbamcmp.cpp' || echo './'`test/testbamcmp.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamdif-testbamdif.o `test -f 'test/testbamdif.cpp' || echo './'`test/testbamdif.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testqreorder-testqreorder.o `test -f 'test/testqreorder.cpp' || echo './'`test/testqreorder.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfqbgzf-testfqbgzf.o `test -f 'test/testfqbgzf.cpp' || echo './'`test/testfqbgzf.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testoverlap-testoverlap.o `test -f 'test/testoverlap.cpp' || echo './'`test/testoverlap.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testcompactfastrandom-testcompactfastrandom.o `test -f 'test/testcompactfastrandom.cpp' || echo './'`test/testcompactfastrandom.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamindex-testbamindex.o `test -f 'test/testbamindex.cpp' || echo './'`test/testbamindex.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamrewrite-testbamrewrite.o `test -f 'test/testbamrewrite.cpp' || echo './'`test/testbamrewrite.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastqstream-testfastqstream.o `test -f 'test/testfastqstream.cpp' || echo './'`test/testfastqstream.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsort-testsort.o `test -f 'test/testsort.cpp' || echo './'`test/testsort.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testexternalsort-testexternalsort.o `test -f 'test/testexternalsort.cpp' || echo './'`test/testexternalsort.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testcollatespeed-testcollatespeed.o `test -f 'test/testcollatespeed.cpp' || echo './'`test/testcollatespeed.cpp In file included from ./libmaus2/bambam/BamIndexBin.hpp:22, from ./libmaus2/bambam/BamIndexRef.hpp:22, from ./libmaus2/bambam/BamIndex.hpp:22, from test/testbamindex.cpp:20: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::bambam::BamIndexBinChunk; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamheaderparser-testbamheaderparser.o `test -f 'test/testbamheaderparser.cpp' || echo './'`test/testbamheaderparser.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbammergecoordinate-testbammergecoordinate.o `test -f 'test/testbammergecoordinate.cpp' || echo './'`test/testbammergecoordinate.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbammergecollate-testbammergecollate.o `test -f 'test/testbammergecollate.cpp' || echo './'`test/testbammergecollate.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbammergequeryname-testbammergequeryname.o `test -f 'test/testbammergequeryname.cpp' || echo './'`test/testbammergequeryname.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamcat-testbamcat.o `test -f 'test/testbamcat.cpp' || echo './'`test/testbamcat.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testautoarray2d-testautoarray2d.o `test -f 'test/testautoarray2d.cpp' || echo './'`test/testautoarray2d.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testhist-testhist.o `test -f 'test/testhist.cpp' || echo './'`test/testhist.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastaparse-testfastaparse.o `test -f 'test/testfastaparse.cpp' || echo './'`test/testfastaparse.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testvalidatebamindex-testvalidatebamindex.o `test -f 'test/testvalidatebamindex.cpp' || echo './'`test/testvalidatebamindex.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testeditdistance-testeditdistance.o `test -f 'test/testeditdistance.cpp' || echo './'`test/testeditdistance.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testthreadpool-testthreadpool.o `test -f 'test/testthreadpool.cpp' || echo './'`test/testthreadpool.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsimplethreadpool-testsimplethreadpool.o `test -f 'test/testsimplethreadpool.cpp' || echo './'`test/testsimplethreadpool.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testthreadpoolbamdecode-testthreadpoolbamdecode.o `test -f 'test/testthreadpoolbamdecode.cpp' || echo './'`test/testthreadpoolbamdecode.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsimplethreadpoolbamdecode-testsimplethreadpoolbamdecode.o `test -f 'test/testsimplethreadpoolbamdecode.cpp' || echo './'`test/testsimplethreadpoolbamdecode.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testgaparraybyte-testgaparraybyte.o `test -f 'test/testgaparraybyte.cpp' || echo './'`test/testgaparraybyte.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testzlibconcat-testzlibconcat.o `test -f 'test/testzlibconcat.cpp' || echo './'`test/testzlibconcat.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsimplecompressblock-testsimplecompressblock.o `test -f 'test/testsimplecompressblock.cpp' || echo './'`test/testsimplecompressblock.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testrazdec-testrazdec.o `test -f 'test/testrazdec.cpp' || echo './'`test/testrazdec.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfaindex-testfaindex.o `test -f 'test/testfaindex.cpp' || echo './'`test/testfaindex.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastablockrecode-testfastablockrecode.o `test -f 'test/testfastablockrecode.cpp' || echo './'`test/testfastablockrecode.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testhttp-testhttp.o `test -f 'test/testhttp.cpp' || echo './'`test/testhttp.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testftp-testftp.o `test -f 'test/testftp.cpp' || echo './'`test/testftp.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testrlhist-testrlhist.o `test -f 'test/testrlhist.cpp' || echo './'`test/testrlhist.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testnumcpus-testnumcpus.o `test -f 'test/testnumcpus.cpp' || echo './'`test/testnumcpus.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdiag-testdiag.o `test -f 'test/testdiag.cpp' || echo './'`test/testdiag.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlinuxstreamingwrite-testlinuxstreamingwrite.o `test -f 'test/testlinuxstreamingwrite.cpp' || echo './'`test/testlinuxstreamingwrite.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlowmembamheaderparser-testlowmembamheaderparser.o `test -f 'test/testlowmembamheaderparser.cpp' || echo './'`test/testlowmembamheaderparser.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testgeneflatfile-testgeneflatfile.o `test -f 'test/testgeneflatfile.cpp' || echo './'`test/testgeneflatfile.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testurlinputstream-testurlinputstream.o `test -f 'test/testurlinputstream.cpp' || echo './'`test/testurlinputstream.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsimpletrie-testsimpletrie.o `test -f 'test/testsimpletrie.cpp' || echo './'`test/testsimpletrie.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testgnutls-testgnutls.o `test -f 'test/testgnutls.cpp' || echo './'`test/testgnutls.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlru-testlru.o `test -f 'test/testlru.cpp' || echo './'`test/testlru.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbytecnt-testbytecnt.o `test -f 'test/testbytecnt.cpp' || echo './'`test/testbytecnt.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/teststronglyconnectedcomponents-teststronglyconnectedcomponents.o `test -f 'test/teststronglyconnectedcomponents.cpp' || echo './'`test/teststronglyconnectedcomponents.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testtopologicalsorting-testtopologicalsorting.o `test -f 'test/testtopologicalsorting.cpp' || echo './'`test/testtopologicalsorting.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlinebuffer-testlinebuffer.o `test -f 'test/testlinebuffer.cpp' || echo './'`test/testlinebuffer.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsamdecoder-testsamdecoder.o `test -f 'test/testsamdecoder.cpp' || echo './'`test/testsamdecoder.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdecimalnumberparser-testdecimalnumberparser.o `test -f 'test/testdecimalnumberparser.cpp' || echo './'`test/testdecimalnumberparser.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testunsignedinteger-testunsignedinteger.o `test -f 'test/testunsignedinteger.cpp' || echo './'`test/testunsignedinteger.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testmd5-testmd5.o `test -f 'test/testmd5.cpp' || echo './'`test/testmd5.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsha-testsha.o `test -f 'test/testsha.cpp' || echo './'`test/testsha.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/libmaus2digests_a-SHA2_256_sse4.o `test -f 'libmaus2/digest/SHA2_256_sse4.cpp' || echo './'`libmaus2/digest/SHA2_256_sse4.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/libmaus2digests_a-SHA2_512_sse4.o `test -f 'libmaus2/digest/SHA2_512_sse4.cpp' || echo './'`libmaus2/digest/SHA2_512_sse4.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/libmaus2digests_a-DigestFactory_SHA2_ASM.o `test -f 'libmaus2/digest/DigestFactory_SHA2_ASM.cpp' || echo './'`libmaus2/digest/DigestFactory_SHA2_ASM.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/libmaus2digests_sse4_a-CRC32C_sse42.o `test -f 'libmaus2/digest/CRC32C_sse42.cpp' || echo './'`libmaus2/digest/CRC32C_sse42.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/libmaus2digests_sse4_a-DigestFactory_CRC32C_SSE42.o `test -f 'libmaus2/digest/DigestFactory_CRC32C_SSE42.cpp' || echo './'`libmaus2/digest/DigestFactory_CRC32C_SSE42.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsinglefileserver-testsinglefileserver.o `test -f 'test/testsinglefileserver.cpp' || echo './'`test/testsinglefileserver.cpp libmaus2/digest/CRC32C_sse42.cpp: In member function ‘void libmaus2::digest::CRC32C_sse42::update(const uint8_t*, size_t)’: libmaus2/digest/CRC32C_sse42.cpp:70:61: warning: unused parameter ‘t’ [-Wunused-parameter] 70 | void libmaus2::digest::CRC32C_sse42::update(uint8_t const * t, size_t l) | ~~~~~~~~~~~~~~~~^ libmaus2/digest/CRC32C_sse42.cpp:70:71: warning: unused parameter ‘l’ [-Wunused-parameter] 70 | void libmaus2::digest::CRC32C_sse42::update(uint8_t const * t, size_t l) | ~~~~~~~^ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testparallelbamvalidation-testparallelbamvalidation.o `test -f 'test/testparallelbamvalidation.cpp' || echo './'`test/testparallelbamvalidation.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testparallelbamrewrite-testparallelbamrewrite.o `test -f 'test/testparallelbamrewrite.cpp' || echo './'`test/testparallelbamrewrite.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbammateerase-testbammateerase.o `test -f 'test/testbammateerase.cpp' || echo './'`test/testbammateerase.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testparallelbamblocksort-testparallelbamblocksort.o `test -f 'test/testparallelbamblocksort.cpp' || echo './'`test/testparallelbamblocksort.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/libmaus2seqchksumsfactory_a-ChecksumsFactory.o `test -f 'libmaus2/bambam/ChecksumsFactory.cpp' || echo './'`libmaus2/bambam/ChecksumsFactory.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testmapperm-testmapperm.o `test -f 'test/testmapperm.cpp' || echo './'`test/testmapperm.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testexternalmemoryindex-testexternalmemoryindex.o `test -f 'test/testexternalmemoryindex.cpp' || echo './'`test/testexternalmemoryindex.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastqtobam-testfastqtobam.o `test -f 'test/testfastqtobam.cpp' || echo './'`test/testfastqtobam.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsamrecoding-testsamrecoding.o `test -f 'test/testsamrecoding.cpp' || echo './'`test/testsamrecoding.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdazzlerdb-testdazzlerdb.o `test -f 'test/testdazzlerdb.cpp' || echo './'`test/testdazzlerdb.cpp In file included from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23, from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23, from ./libmaus2/bambam/BamAlignment.hpp:24, from ./libmaus2/bambam/ChecksumsInterface.hpp:22, from ./libmaus2/bambam/ChecksumsFactory.hpp:22, from ./libmaus2/bambam/ChecksumsInterfaceAllocator.hpp:22, from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:27, from test/testparallelbamblocksort.cpp:19: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::bambam::BamIndexBinChunk; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testnd-testnd.o `test -f 'test/testnd.cpp' || echo './'`test/testnd.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastashred-testfastashred.o `test -f 'test/testfastashred.cpp' || echo './'`test/testfastashred.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testalignerspeed-testalignerspeed.o `test -f 'test/testalignerspeed.cpp' || echo './'`test/testalignerspeed.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastasingleline-testfastasingleline.o `test -f 'test/testfastasingleline.cpp' || echo './'`test/testfastasingleline.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdazzleralignmentrewrite-testdazzleralignmentrewrite.o `test -f 'test/testdazzleralignmentrewrite.cpp' || echo './'`test/testdazzleralignmentrewrite.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testxz-testxz.o `test -f 'test/testxz.cpp' || echo './'`test/testxz.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdazzlerindex-testdazzlerindex.o `test -f 'test/testdazzlerindex.cpp' || echo './'`test/testdazzlerindex.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testargparser-testargparser.o `test -f 'test/testargparser.cpp' || echo './'`test/testargparser.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfragmentenvelope-testfragmentenvelope.o `test -f 'test/testfragmentenvelope.cpp' || echo './'`test/testfragmentenvelope.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdnarank-testdnarank.o `test -f 'test/testdnarank.cpp' || echo './'`test/testdnarank.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlowbits-testlowbits.o `test -f 'test/testlowbits.cpp' || echo './'`test/testlowbits.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfastaexplode-testfastaexplode.o `test -f 'test/testfastaexplode.cpp' || echo './'`test/testfastaexplode.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testfaextract-testfaextract.o `test -f 'test/testfaextract.cpp' || echo './'`test/testfaextract.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testmurmur3-testmurmur3.o `test -f 'test/testmurmur3.cpp' || echo './'`test/testmurmur3.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testpairalign-testpairalign.o `test -f 'test/testpairalign.cpp' || echo './'`test/testpairalign.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsplaytree-testsplaytree.o `test -f 'test/testsplaytree.cpp' || echo './'`test/testsplaytree.cpp In file included from ./libmaus2/rank/DNARankSMEMContext.hpp:22, from ./libmaus2/rank/DNARank.hpp:21, from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22, from test/testdnarank.cpp:20: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::huffman::IndexEntry; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ In file included from ./libmaus2/index/ExternalMemoryIndexGenerator.hpp:26, from ./libmaus2/dazzler/align/OverlapIndexer.hpp:24, from ./libmaus2/dazzler/align/AlignmentWriter.hpp:21, from test/testpairalign.cpp:24: ./libmaus2/index/ExternalMemoryIndexRecord.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::index::ExternalMemoryIndexRecord; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase >]’: ./libmaus2/index/ExternalMemoryIndexRecord.hpp:33:10: warning: ‘.libmaus2::index::ExternalMemoryIndexRecord::D’ may be used uninitialized in this function [-Wmaybe-uninitialized] 33 | struct ExternalMemoryIndexRecord | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./libmaus2/index/ExternalMemoryIndexRecord.hpp:33:10: warning: ‘.libmaus2::index::ExternalMemoryIndexRecord::D’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/index/ExternalMemoryIndexRecord.hpp:33:10: warning: ‘.libmaus2::index::ExternalMemoryIndexRecord::D’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/index/ExternalMemoryIndexRecord.hpp:33:10: warning: ‘.libmaus2::index::ExternalMemoryIndexRecord::D’ may be used uninitialized in this function [-Wmaybe-uninitialized] g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbwtconstruction-testbwtconstruction.o `test -f 'test/testbwtconstruction.cpp' || echo './'`test/testbwtconstruction.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbwtconstructionfasta-testbwtconstructionfasta.o `test -f 'test/testbwtconstructionfasta.cpp' || echo './'`test/testbwtconstructionfasta.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testarrayinput-testarrayinput.o `test -f 'test/testarrayinput.cpp' || echo './'`test/testarrayinput.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testhugepages-testhugepages.o `test -f 'test/testhugepages.cpp' || echo './'`test/testhugepages.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsymcnt-testsymcnt.o `test -f 'test/testsymcnt.cpp' || echo './'`test/testsymcnt.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testgammapd-testgammapd.o `test -f 'test/testgammapd.cpp' || echo './'`test/testgammapd.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testpo-testpo.o `test -f 'test/testpo.cpp' || echo './'`test/testpo.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testdnasuffixtrav-testdnasuffixtrav.o `test -f 'test/testdnasuffixtrav.cpp' || echo './'`test/testdnasuffixtrav.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testserialisedsorting-testserialisedsorting.o `test -f 'test/testserialisedsorting.cpp' || echo './'`test/testserialisedsorting.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamnumericalindex-testbamnumericalindex.o `test -f 'test/testbamnumericalindex.cpp' || echo './'`test/testbamnumericalindex.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testnpl-testnpl.o `test -f 'test/testnpl.cpp' || echo './'`test/testnpl.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testkcnt-testkcnt.o `test -f 'test/testkcnt.cpp' || echo './'`test/testkcnt.cpp In file included from ./libmaus2/aio/ArrayInputStreamBuffer.hpp:24, from ./libmaus2/aio/ArrayInputStream.hpp:22, from test/testdnasuffixtrav.cpp:18: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::rank::DNARankSuffixTreeNodeEnumeratorQueueElement; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testintervaltree-testintervaltree.o `test -f 'test/testintervaltree.cpp' || echo './'`test/testintervaltree.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testbamgetrefreg-testbamgetrefreg.o `test -f 'test/testbamgetrefreg.cpp' || echo './'`test/testbamgetrefreg.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/teststringgraph-teststringgraph.o `test -f 'test/teststringgraph.cpp' || echo './'`test/teststringgraph.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlognormal-testlognormal.o `test -f 'test/testlognormal.cpp' || echo './'`test/testlognormal.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testConstantSumCombinatorics-testConstantSumCombinatorics.o `test -f 'test/testConstantSumCombinatorics.cpp' || echo './'`test/testConstantSumCombinatorics.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testmatrix-testmatrix.o `test -f 'test/testmatrix.cpp' || echo './'`test/testmatrix.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlibarchive-testlibarchive.o `test -f 'test/testlibarchive.cpp' || echo './'`test/testlibarchive.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testconvpowercache-testconvpowercache.o `test -f 'test/testconvpowercache.cpp' || echo './'`test/testconvpowercache.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/math/libmaus2fftw_a-binom_fftw.o `test -f 'libmaus2/math/binom_fftw.cpp' || echo './'`libmaus2/math/binom_fftw.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/math/libmaus2fftw_a-Convolution_fftw.o `test -f 'libmaus2/math/Convolution_fftw.cpp' || echo './'`libmaus2/math/Convolution_fftw.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testlassort-testlassort.o `test -f 'test/testlassort.cpp' || echo './'`test/testlassort.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testthreadpoolbgzfdecode-testthreadpoolbgzfdecode.o `test -f 'test/testthreadpoolbgzfdecode.cpp' || echo './'`test/testthreadpoolbgzfdecode.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testnnplocalaligner-testnnplocalaligner.o `test -f 'test/testnnplocalaligner.cpp' || echo './'`test/testnnplocalaligner.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testsuffixtreenum-testsuffixtreenum.o `test -f 'test/testsuffixtreenum.cpp' || echo './'`test/testsuffixtreenum.cpp /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c -o libmaus2/bambam/scram_mod_la-Scram.lo `test -f 'libmaus2/bambam/Scram.c' || echo './'`libmaus2/bambam/Scram.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/bambam/Scram.c -fPIC -DPIC -o libmaus2/bambam/.libs/scram_mod_la-Scram.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/bambam/Scram.c -o libmaus2/bambam/scram_mod_la-Scram.o >/dev/null 2>&1 g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o test/testAIO-testAIO.o `test -f 'test/testAIO.cpp' || echo './'`test/testAIO.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/la-StaticInitialization.lo `test -f 'libmaus2/StaticInitialization.cpp' || echo './'`libmaus2/StaticInitialization.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/StaticInitialization.cpp -fPIC -DPIC -o libmaus2/.libs/la-StaticInitialization.o In file included from ./libmaus2/dazzler/db/TrackAnno.hpp:22, from ./libmaus2/dazzler/db/Track.hpp:21, from ./libmaus2/dazzler/db/DatabaseFile.hpp:23, from test/testnnplocalaligner.cpp:20: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::lcs::NNPCorLocalAligner::NNPCorLocalAlignerKmerMatches; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ In file included from ./libmaus2/index/ExternalMemoryIndexGenerator.hpp:26, from ./libmaus2/dazzler/align/OverlapIndexer.hpp:24, from ./libmaus2/dazzler/align/AlignmentWriter.hpp:21, from test/testnnplocalaligner.cpp:24: ./libmaus2/index/ExternalMemoryIndexRecord.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::index::ExternalMemoryIndexRecord; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase >]’: ./libmaus2/index/ExternalMemoryIndexRecord.hpp:33:10: warning: ‘.libmaus2::index::ExternalMemoryIndexRecord::D’ may be used uninitialized in this function [-Wmaybe-uninitialized] 33 | struct ExternalMemoryIndexRecord | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./libmaus2/index/ExternalMemoryIndexRecord.hpp:33:10: warning: ‘.libmaus2::index::ExternalMemoryIndexRecord::D’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/index/ExternalMemoryIndexRecord.hpp:33:10: warning: ‘.libmaus2::index::ExternalMemoryIndexRecord::D’ may be used uninitialized in this function [-Wmaybe-uninitialized] ./libmaus2/index/ExternalMemoryIndexRecord.hpp:33:10: warning: ‘.libmaus2::index::ExternalMemoryIndexRecord::D’ may be used uninitialized in this function [-Wmaybe-uninitialized] /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/autoarray/la-AutoArray.lo `test -f 'libmaus2/autoarray/AutoArray.cpp' || echo './'`libmaus2/autoarray/AutoArray.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/autoarray/AutoArray.cpp -fPIC -DPIC -o libmaus2/autoarray/.libs/la-AutoArray.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bitio/la-CompactArray.lo `test -f 'libmaus2/bitio/CompactArray.cpp' || echo './'`libmaus2/bitio/CompactArray.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/autoarray/AutoArray.cpp -o libmaus2/autoarray/la-AutoArray.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bitio/CompactArray.cpp -fPIC -DPIC -o libmaus2/bitio/.libs/la-CompactArray.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bitio/CompactArray.cpp -o libmaus2/bitio/la-CompactArray.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/rank/la-RankTable.lo `test -f 'libmaus2/rank/RankTable.cpp' || echo './'`libmaus2/rank/RankTable.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/RankTable.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-RankTable.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/rank/la-log2table.lo `test -f 'libmaus2/rank/log2table.cpp' || echo './'`libmaus2/rank/log2table.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/log2table.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-log2table.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/RankTable.cpp -o libmaus2/rank/la-RankTable.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/log2table.cpp -o libmaus2/rank/la-log2table.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-isFastQ.lo `test -f 'libmaus2/fastx/isFastQ.cpp' || echo './'`libmaus2/fastx/isFastQ.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/isFastQ.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-isFastQ.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/wavelet/la-toWaveletTreeBits.lo `test -f 'libmaus2/wavelet/toWaveletTreeBits.cpp' || echo './'`libmaus2/wavelet/toWaveletTreeBits.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/wavelet/toWaveletTreeBits.cpp -fPIC -DPIC -o libmaus2/wavelet/.libs/la-toWaveletTreeBits.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/isFastQ.cpp -o libmaus2/fastx/la-isFastQ.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/la-divsufsort.lo `test -f 'libmaus2/suffixsort/divsufsort.cpp' || echo './'`libmaus2/suffixsort/divsufsort.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/divsufsort.cpp -fPIC -DPIC -o libmaus2/suffixsort/.libs/la-divsufsort.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/divsufsort.cpp -o libmaus2/suffixsort/la-divsufsort.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/rmq/la-FischerSystematicSuccinctRMQ.lo `test -f 'libmaus2/rmq/FischerSystematicSuccinctRMQ.cpp' || echo './'`libmaus2/rmq/FischerSystematicSuccinctRMQ.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rmq/FischerSystematicSuccinctRMQ.cpp -fPIC -DPIC -o libmaus2/rmq/.libs/la-FischerSystematicSuccinctRMQ.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/rmq/FischerSystematicSuccinctRMQ.cpp -o libmaus2/rmq/la-FischerSystematicSuccinctRMQ.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcp/la-OracleLCP.lo `test -f 'libmaus2/lcp/OracleLCP.cpp' || echo './'`libmaus2/lcp/OracleLCP.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcp/OracleLCP.cpp -fPIC -DPIC -o libmaus2/lcp/.libs/la-OracleLCP.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-StackTrace.lo `test -f 'libmaus2/util/StackTrace.cpp' || echo './'`libmaus2/util/StackTrace.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/StackTrace.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-StackTrace.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcp/OracleLCP.cpp -o libmaus2/lcp/la-OracleLCP.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/wavelet/toWaveletTreeBits.cpp -o libmaus2/wavelet/la-toWaveletTreeBits.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-OverlapComputation.lo `test -f 'libmaus2/lcs/OverlapComputation.cpp' || echo './'`libmaus2/lcs/OverlapComputation.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/OverlapComputation.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-OverlapComputation.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/util/StackTrace.cpp -o libmaus2/util/la-StackTrace.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-HashContainer.lo `test -f 'libmaus2/lcs/HashContainer.cpp' || echo './'`libmaus2/lcs/HashContainer.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/HashContainer.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-HashContainer.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/HashContainer.cpp -o libmaus2/lcs/la-HashContainer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-HashContainer2.lo `test -f 'libmaus2/lcs/HashContainer2.cpp' || echo './'`libmaus2/lcs/HashContainer2.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/HashContainer2.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-HashContainer2.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/HashContainer2.cpp -o libmaus2/lcs/la-HashContainer2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-md5.lo `test -f 'libmaus2/digest/md5.cpp' || echo './'`libmaus2/digest/md5.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/md5.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-md5.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/md5.cpp -o libmaus2/digest/la-md5.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/OverlapComputation.cpp -o libmaus2/lcs/la-OverlapComputation.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/math/la-primes16.lo `test -f 'libmaus2/math/primes16.cpp' || echo './'`libmaus2/math/primes16.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/math/primes16.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-primes16.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/math/primes16.cpp -o libmaus2/math/la-primes16.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/select/la-ESelectBase.lo `test -f 'libmaus2/select/ESelectBase.cpp' || echo './'`libmaus2/select/ESelectBase.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/select/ESelectBase.cpp -fPIC -DPIC -o libmaus2/select/.libs/la-ESelectBase.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-CigarStringParser.lo `test -f 'libmaus2/bambam/CigarStringParser.cpp' || echo './'`libmaus2/bambam/CigarStringParser.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/CigarStringParser.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-CigarStringParser.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/select/ESelectBase.cpp -o libmaus2/select/la-ESelectBase.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/graph/la-EdgeList.lo `test -f 'libmaus2/graph/EdgeList.cpp' || echo './'`libmaus2/graph/EdgeList.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/graph/EdgeList.cpp -fPIC -DPIC -o libmaus2/graph/.libs/la-EdgeList.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c -o libmaus2/network/la-sendReceiveFd.lo `test -f 'libmaus2/network/sendReceiveFd.c' || echo './'`libmaus2/network/sendReceiveFd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/network/sendReceiveFd.c -fPIC -DPIC -o libmaus2/network/.libs/la-sendReceiveFd.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/network/sendReceiveFd.c -o libmaus2/network/la-sendReceiveFd.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-SnappyCompress.lo `test -f 'libmaus2/lz/SnappyCompress.cpp' || echo './'`libmaus2/lz/SnappyCompress.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/graph/EdgeList.cpp -o libmaus2/graph/la-EdgeList.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/SnappyCompress.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-SnappyCompress.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/StaticInitialization.cpp -o libmaus2/la-StaticInitialization.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/CigarStringParser.cpp -o libmaus2/bambam/la-CigarStringParser.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/huffman/la-IndexLoaderBase.lo `test -f 'libmaus2/huffman/IndexLoaderBase.cpp' || echo './'`libmaus2/huffman/IndexLoaderBase.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/IndexLoaderBase.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-IndexLoaderBase.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/SnappyCompress.cpp -o libmaus2/lz/la-SnappyCompress.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fm/la-MausFmToBwaConversion.lo `test -f 'libmaus2/fm/MausFmToBwaConversion.cpp' || echo './'`libmaus2/fm/MausFmToBwaConversion.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/MausFmToBwaConversion.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-MausFmToBwaConversion.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixtree/la-CompressedSuffixTree.lo `test -f 'libmaus2/suffixtree/CompressedSuffixTree.cpp' || echo './'`libmaus2/suffixtree/CompressedSuffixTree.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixtree/CompressedSuffixTree.cpp -fPIC -DPIC -o libmaus2/suffixtree/.libs/la-CompressedSuffixTree.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/IndexLoaderBase.cpp -o libmaus2/huffman/la-IndexLoaderBase.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/gamma/la-SparseGammaGapFileIndexDecoderEntry.lo `test -f 'libmaus2/gamma/SparseGammaGapFileIndexDecoderEntry.cpp' || echo './'`libmaus2/gamma/SparseGammaGapFileIndexDecoderEntry.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/gamma/SparseGammaGapFileIndexDecoderEntry.cpp -fPIC -DPIC -o libmaus2/gamma/.libs/la-SparseGammaGapFileIndexDecoderEntry.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/gamma/SparseGammaGapFileIndexDecoderEntry.cpp -o libmaus2/gamma/la-SparseGammaGapFileIndexDecoderEntry.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/parallel/la-ThreadWorkPackage.lo `test -f 'libmaus2/parallel/ThreadWorkPackage.cpp' || echo './'`libmaus2/parallel/ThreadWorkPackage.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/ThreadWorkPackage.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-ThreadWorkPackage.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/ThreadWorkPackage.cpp -o libmaus2/parallel/la-ThreadWorkPackage.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixtree/CompressedSuffixTree.cpp -o libmaus2/suffixtree/la-CompressedSuffixTree.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/parallel/la-SimpleThreadWorkPackage.lo `test -f 'libmaus2/parallel/SimpleThreadWorkPackage.cpp' || echo './'`libmaus2/parallel/SimpleThreadWorkPackage.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/SimpleThreadWorkPackage.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-SimpleThreadWorkPackage.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/SimpleThreadWorkPackage.cpp -o libmaus2/parallel/la-SimpleThreadWorkPackage.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/hashing/la-Crc32.lo `test -f 'libmaus2/hashing/Crc32.cpp' || echo './'`libmaus2/hashing/Crc32.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/hashing/Crc32.cpp -fPIC -DPIC -o libmaus2/hashing/.libs/la-Crc32.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/hashing/Crc32.cpp -o libmaus2/hashing/la-Crc32.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/hashing/la-MurmurHash3.lo `test -f 'libmaus2/hashing/MurmurHash3.cpp' || echo './'`libmaus2/hashing/MurmurHash3.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/hashing/MurmurHash3.cpp -fPIC -DPIC -o libmaus2/hashing/.libs/la-MurmurHash3.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/hashing/MurmurHash3.cpp -o libmaus2/hashing/la-MurmurHash3.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/trie/la-SimpleTrie.lo `test -f 'libmaus2/trie/SimpleTrie.cpp' || echo './'`libmaus2/trie/SimpleTrie.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/trie/SimpleTrie.cpp -fPIC -DPIC -o libmaus2/trie/.libs/la-SimpleTrie.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/trie/SimpleTrie.cpp -o libmaus2/trie/la-SimpleTrie.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/alignment/la-FactorMatchInfo.lo `test -f 'libmaus2/alignment/FactorMatchInfo.cpp' || echo './'`libmaus2/alignment/FactorMatchInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/alignment/FactorMatchInfo.cpp -fPIC -DPIC -o libmaus2/alignment/.libs/la-FactorMatchInfo.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/alignment/FactorMatchInfo.cpp -o libmaus2/alignment/la-FactorMatchInfo.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/alignment/la-KmerInfo.lo `test -f 'libmaus2/alignment/KmerInfo.cpp' || echo './'`libmaus2/alignment/KmerInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/alignment/KmerInfo.cpp -fPIC -DPIC -o libmaus2/alignment/.libs/la-KmerInfo.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/parallel/la-ValidationFragment.lo `test -f 'libmaus2/bambam/parallel/ValidationFragment.cpp' || echo './'`libmaus2/bambam/parallel/ValidationFragment.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/alignment/KmerInfo.cpp -o libmaus2/alignment/la-KmerInfo.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/parallel/ValidationFragment.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-ValidationFragment.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/parallel/la-GenericInputControlStreamInfo.lo `test -f 'libmaus2/bambam/parallel/GenericInputControlStreamInfo.cpp' || echo './'`libmaus2/bambam/parallel/GenericInputControlStreamInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/parallel/GenericInputControlStreamInfo.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-GenericInputControlStreamInfo.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/MausFmToBwaConversion.cpp -o libmaus2/fm/la-MausFmToBwaConversion.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/parallel/GenericInputControlStreamInfo.cpp -o libmaus2/bambam/parallel/la-GenericInputControlStreamInfo.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/db/la-FastaInfo.lo `test -f 'libmaus2/dazzler/db/FastaInfo.cpp' || echo './'`libmaus2/dazzler/db/FastaInfo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/db/FastaInfo.cpp -fPIC -DPIC -o libmaus2/dazzler/db/.libs/la-FastaInfo.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/db/FastaInfo.cpp -o libmaus2/dazzler/db/la-FastaInfo.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/db/la-IndexBase.lo `test -f 'libmaus2/dazzler/db/IndexBase.cpp' || echo './'`libmaus2/dazzler/db/IndexBase.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/db/IndexBase.cpp -fPIC -DPIC -o libmaus2/dazzler/db/.libs/la-IndexBase.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/db/IndexBase.cpp -o libmaus2/dazzler/db/la-IndexBase.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/parallel/ValidationFragment.cpp -o libmaus2/bambam/parallel/la-ValidationFragment.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/db/la-DatabaseFile.lo `test -f 'libmaus2/dazzler/db/DatabaseFile.cpp' || echo './'`libmaus2/dazzler/db/DatabaseFile.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/db/DatabaseFile.cpp -fPIC -DPIC -o libmaus2/dazzler/db/.libs/la-DatabaseFile.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/db/DatabaseFile.cpp -o libmaus2/dazzler/db/la-DatabaseFile.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/db/la-Read.lo `test -f 'libmaus2/dazzler/db/Read.cpp' || echo './'`libmaus2/dazzler/db/Read.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-Path.lo `test -f 'libmaus2/dazzler/align/Path.cpp' || echo './'`libmaus2/dazzler/align/Path.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/db/Read.cpp -fPIC -DPIC -o libmaus2/dazzler/db/.libs/la-Read.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/Path.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-Path.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/db/Read.cpp -o libmaus2/dazzler/db/la-Read.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/Path.cpp -o libmaus2/dazzler/align/la-Path.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-Overlap.lo `test -f 'libmaus2/dazzler/align/Overlap.cpp' || echo './'`libmaus2/dazzler/align/Overlap.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/Overlap.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-Overlap.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-InputStreamInstance.lo `test -f 'libmaus2/aio/InputStreamInstance.cpp' || echo './'`libmaus2/aio/InputStreamInstance.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeGapRequest.lo `test -f 'libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequest.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequest.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/InputStreamInstance.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-InputStreamInstance.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequest.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeGapRequest.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSort.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSort.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/Overlap.cpp -o libmaus2/dazzler/align/la-Overlap.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequest.cpp -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeGapRequest.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtComputeSSA.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtComputeSSA.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/timing/la-RealTimeClock.lo `test -f 'libmaus2/timing/RealTimeClock.cpp' || echo './'`libmaus2/timing/RealTimeClock.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/timing/RealTimeClock.cpp -fPIC -DPIC -o libmaus2/timing/.libs/la-RealTimeClock.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/InputStreamInstance.cpp -o libmaus2/aio/la-InputStreamInstance.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/timing/RealTimeClock.cpp -o libmaus2/timing/la-RealTimeClock.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/exception/la-LibMausException.lo `test -f 'libmaus2/exception/LibMausException.cpp' || echo './'`libmaus2/exception/LibMausException.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/exception/LibMausException.cpp -fPIC -DPIC -o libmaus2/exception/.libs/la-LibMausException.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/exception/LibMausException.cpp -o libmaus2/exception/la-LibMausException.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -version-info 2:611:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o libmaus2_simd_align_128.la -rpath /usr/lib/s390x-linux-gnu libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.lo libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.lo libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.lo libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.lo libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.lo -lrt -lz libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu/crti.o /usr/lib/gcc/s390x-linux-gnu/9/crtbeginS.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o -lrt -lz -L/usr/lib/gcc/s390x-linux-gnu/9 -L/usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu -L/usr/lib/gcc/s390x-linux-gnu/9/../../../../lib -L/lib/s390x-linux-gnu -L/lib/../lib -L/usr/lib/s390x-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/s390x-linux-gnu/9/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/s390x-linux-gnu/9/crtendS.o /usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_simd_align_128.so.2 -o .libs/libmaus2_simd_align_128.so.2.0.611 libtool: link: (cd ".libs" && rm -f "libmaus2_simd_align_128.so.2" && ln -s "libmaus2_simd_align_128.so.2.0.611" "libmaus2_simd_align_128.so.2") libtool: link: (cd ".libs" && rm -f "libmaus2_simd_align_128.so" && ln -s "libmaus2_simd_align_128.so.2.0.611" "libmaus2_simd_align_128.so") libtool: link: ar cru .libs/libmaus2_simd_align_128.a libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmaus2_simd_align_128.a libtool: link: ( cd ".libs" && rm -f "libmaus2_simd_align_128.la" && ln -s "../libmaus2_simd_align_128.la" "libmaus2_simd_align_128.la" ) /bin/bash ../libtool --tag=CXX --mode=link g++ -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -version-info 2:611:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o libmaus2_simd_align_256.la -rpath /usr/lib/s390x-linux-gnu libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.lo libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.lo libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.lo libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.lo libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.lo libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.lo libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.lo -lrt -lz libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu/crti.o /usr/lib/gcc/s390x-linux-gnu/9/crtbeginS.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o libmaus2/lcs/.libs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o -lrt -lz -L/usr/lib/gcc/s390x-linux-gnu/9 -L/usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu -L/usr/lib/gcc/s390x-linux-gnu/9/../../../../lib -L/lib/s390x-linux-gnu -L/lib/../lib -L/usr/lib/s390x-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/s390x-linux-gnu/9/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/s390x-linux-gnu/9/crtendS.o /usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_simd_align_256.so.2 -o .libs/libmaus2_simd_align_256.so.2.0.611 libtool: link: (cd ".libs" && rm -f "libmaus2_simd_align_256.so.2" && ln -s "libmaus2_simd_align_256.so.2.0.611" "libmaus2_simd_align_256.so.2") libtool: link: (cd ".libs" && rm -f "libmaus2_simd_align_256.so" && ln -s "libmaus2_simd_align_256.so.2.0.611" "libmaus2_simd_align_256.so") libtool: link: ar cru .libs/libmaus2_simd_align_256.a libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmaus2_simd_align_256.a g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/irods/a-IRodsSystem.o `test -f 'libmaus2/irods/IRodsSystem.cpp' || echo './'`libmaus2/irods/IRodsSystem.cpp libtool: link: ( cd ".libs" && rm -f "libmaus2_simd_align_256.la" && ln -s "../libmaus2_simd_align_256.la" "libmaus2_simd_align_256.la" ) g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c -o libmaus2/irods/a-IRodsFileBase.o `test -f 'libmaus2/irods/IRodsFileBase.cpp' || echo './'`libmaus2/irods/IRodsFileBase.cpp rm -f libmaus2digests.a ar cru libmaus2digests.a libmaus2/digest/libmaus2digests_a-SHA2_256_sse4.o libmaus2/digest/libmaus2digests_a-SHA2_512_sse4.o libmaus2/digest/libmaus2digests_a-DigestFactory_SHA2_ASM.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmaus2digests.a rm -f libmaus2digests_sse4.a ar cru libmaus2digests_sse4.a libmaus2/digest/libmaus2digests_sse4_a-CRC32C_sse42.o libmaus2/digest/libmaus2digests_sse4_a-DigestFactory_CRC32C_SSE42.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmaus2digests_sse4.a rm -f libmaus2seqchksumsfactory.a ar cru libmaus2seqchksumsfactory.a libmaus2/bambam/libmaus2seqchksumsfactory_a-ChecksumsFactory.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmaus2seqchksumsfactory.a rm -f libmaus2fftw.a ar cru libmaus2fftw.a libmaus2/math/libmaus2fftw_a-binom_fftw.o libmaus2/math/libmaus2fftw_a-Convolution_fftw.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmaus2fftw.a /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -lrt -lz -module -shared -export-dynamic -avoid-version -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o libmaus2_scram_mod.la -rpath /usr/lib/s390x-linux-gnu/libmaus2/2.0.611 libmaus2/bambam/scram_mod_la-Scram.lo -lrt -lz -lrt -lz libtool: link: gcc -shared -fPIC -DPIC libmaus2/bambam/.libs/scram_mod_la-Scram.o -lrt -lz -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_scram_mod.so -o .libs/libmaus2_scram_mod.so libtool: link: ( cd ".libs" && rm -f "libmaus2_scram_mod.la" && ln -s "../libmaus2_scram_mod.la" "libmaus2_scram_mod.la" ) rm -f libmaus2_irods.a ar cru libmaus2_irods.a libmaus2/irods/a-IRodsSystem.o libmaus2/irods/a-IRodsFileBase.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmaus2_irods.a In file included from ./libmaus2/lz/StreamWrapperBuffer.hpp:23, from ./libmaus2/lz/StreamWrapper.hpp:22, from ./libmaus2/aio/PosixFdInput.hpp:41, from ./libmaus2/aio/PosixFdInputWrapper.hpp:22, from ./libmaus2/aio/PosixFdInputStream.hpp:22, from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23, from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23, from ./libmaus2/suffixsort/bwtb3m/BwtComputeSSA.hpp:21, from libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp:18: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = IsaTriple; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtComputeSSA.o >/dev/null 2>&1 In file included from ./libmaus2/math/numbits.hpp:24, from ./libmaus2/huffman/IndexWriter.hpp:24, from ./libmaus2/huffman/RLEncoder.hpp:22, from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22, from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22, from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22, from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19: ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::huffman::IndexEntry; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ ./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray::AutoArray(uint64_t, bool) [with N = libmaus2::suffixsort::GapMergePacket; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase]’: ./libmaus2/autoarray/AutoArray.hpp:1801:5: warning: ‘’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1801 | array[i] = N(); | ^~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSort.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -version-info 2:611:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o libmaus2.la -rpath /usr/lib/s390x-linux-gnu libmaus2/la-StaticInitialization.lo libmaus2/autoarray/la-AutoArray.lo libmaus2/bitio/la-CompactArray.lo libmaus2/rank/la-RankTable.lo libmaus2/rank/la-log2table.lo libmaus2/fastx/la-isFastQ.lo libmaus2/wavelet/la-toWaveletTreeBits.lo libmaus2/suffixsort/la-divsufsort.lo libmaus2/rmq/la-FischerSystematicSuccinctRMQ.lo libmaus2/lcp/la-OracleLCP.lo libmaus2/util/la-StackTrace.lo libmaus2/lcs/la-OverlapComputation.lo libmaus2/lcs/la-HashContainer.lo libmaus2/lcs/la-HashContainer2.lo libmaus2/digest/la-md5.lo libmaus2/util/la-I386CacheLineSize.lo libmaus2/math/la-primes16.lo libmaus2/util/la-OutputFileNameTools.lo libmaus2/select/la-ESelectBase.lo libmaus2/bambam/la-CigarStringParser.lo libmaus2/graph/la-EdgeList.lo libmaus2/fastx/la-Phred.lo libmaus2/network/la-sendReceiveFd.lo libmaus2/lz/la-SnappyCompress.lo libmaus2/bambam/la-CollatingBamDecoder.lo libmaus2/bambam/la-ReadEndsContainer.lo libmaus2/bambam/la-ReadEnds.lo libmaus2/huffman/la-IndexLoaderBase.lo libmaus2/bambam/la-BamAlignmentDecoderBase.lo libmaus2/bambam/la-StrCmpNum.lo libmaus2/huffman/la-KvInitResult.lo libmaus2/fm/la-MausFmToBwaConversion.lo libmaus2/util/la-TempFileNameGenerator.lo libmaus2/util/la-TempFileNameGeneratorState.lo libmaus2/util/la-ArgInfo.lo libmaus2/util/la-Array832.lo libmaus2/util/la-Array864.lo libmaus2/util/la-BitList.lo libmaus2/util/la-VarBitList.lo libmaus2/util/la-Concat.lo libmaus2/util/la-ConcatRequest.lo libmaus2/util/la-ConsoleColor.lo libmaus2/util/la-Demangle.lo libmaus2/util/la-DynamicLoading.lo libmaus2/util/la-GetFileSize.lo libmaus2/util/la-Histogram.lo libmaus2/util/la-HistogramSet.lo libmaus2/util/la-IncreasingList.lo libmaus2/util/la-IntervalTree.lo libmaus2/util/la-GenericIntervalTree.lo libmaus2/util/la-LogPipe.lo libmaus2/util/la-LogPipeMultiplex.lo libmaus2/util/la-LogPipeMultiplexGeneric.lo libmaus2/util/la-LookupIntervalTree.lo libmaus2/digest/la-md5_interface.lo libmaus2/util/la-MemLimit.lo libmaus2/util/la-MemUsage.lo libmaus2/util/la-NearestNeighbourDictionary.lo libmaus2/util/la-NegativeDifferenceArray32.lo libmaus2/util/la-NegativeDifferenceArray64.lo libmaus2/util/la-nstat.lo libmaus2/util/la-PositiveDifferenceArray32.lo libmaus2/util/la-PositiveDifferenceArray64.lo libmaus2/util/la-PosixExecute.lo libmaus2/util/la-PosixFileDescriptor.lo libmaus2/util/la-PosixInputFile.lo libmaus2/util/la-SaturatingCounter.lo libmaus2/util/la-StringSerialisation.lo libmaus2/util/la-SuccinctBorderArray.lo libmaus2/util/la-Terminal.lo libmaus2/util/la-OctetString.lo libmaus2/util/la-Utf8String.lo libmaus2/util/la-Utf8BlockIndexDecoder.lo libmaus2/util/la-Utf8BlockIndex.lo libmaus2/util/la-Utf8DecoderBuffer.lo libmaus2/util/la-Utf8DecoderWrapper.lo libmaus2/suffixtree/la-CompressedSuffixTree.lo libmaus2/bambam/la-AlignmentValidity.lo libmaus2/bambam/la-BamFlagBase.lo libmaus2/bambam/la-ReadGroup.lo libmaus2/bambam/la-DuplicationMetrics.lo libmaus2/bambam/la-BamDefaultAdapters.lo libmaus2/bambam/la-BamRange.lo libmaus2/graph/la-GraphEdge.lo libmaus2/bambam/la-BamIndexBinChunk.lo libmaus2/bambam/la-BamIndexLinearChunk.lo libmaus2/huffman/la-HuffmanTree.lo libmaus2/bambam/la-BamAlignmentDecoderInfo.lo libmaus2/lz/la-Lz4Base.lo libmaus2/lz/la-Lz4Compress.lo libmaus2/lz/la-Lz4DecoderBuffer.lo libmaus2/lz/la-lz4.lo libmaus2/fm/la-BidirectionalIndexInterval.lo libmaus2/fm/la-BidirectionalIndexIntervalSymbol.lo libmaus2/gamma/la-SparseGammaGapFileIndexDecoderEntry.lo libmaus2/fastx/la-FastALineParserLineInfo.lo libmaus2/fastx/la-FastAMatchTable.lo libmaus2/lcs/la-EditDistanceResult.lo libmaus2/fastx/la-FastABgzfIndexEntry.lo libmaus2/fastx/la-FastABgzfIndex.lo libmaus2/parallel/la-ThreadWorkPackage.lo libmaus2/parallel/la-SimpleThreadWorkPackage.lo libmaus2/lz/la-RAZFIndex.lo libmaus2/fastx/la-FastAIndexEntry.lo libmaus2/fastx/la-FastAIndex.lo libmaus2/network/la-HttpAbsoluteUrl.lo libmaus2/hashing/la-Crc32.lo libmaus2/hashing/la-MurmurHash3.lo libmaus2/lz/la-IGzipDeflate.lo libmaus2/lcs/la-LocalBaseConstants.lo libmaus2/lcs/la-LocalEditDistanceResult.lo libmaus2/bambam/la-BamHeaderParserStateBase.lo libmaus2/bambam/la-GeneFlatFile.lo libmaus2/bambam/la-GeneFlatFileEntry.lo libmaus2/trie/la-SimpleTrie.lo libmaus2/network/la-GnuTLSInit.lo libmaus2/network/la-GnuTLSSocket.lo libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.lo libmaus2/alignment/la-FactorMatchInfo.lo libmaus2/alignment/la-KmerInfo.lo libmaus2/bambam/la-SamInfoBase.lo libmaus2/digest/la-SHA1.lo libmaus2/digest/la-SHA2_224.lo libmaus2/digest/la-SHA2_256.lo libmaus2/digest/la-SHA2_384.lo libmaus2/digest/la-SHA2_512.lo libmaus2/digest/la-CRC32.lo libmaus2/digest/la-CRC32C_Core.lo libmaus2/digest/la-CRC32C.lo libmaus2/digest/la-CRC32_Core.lo libmaus2/bambam/parallel/la-ValidationFragment.lo libmaus2/bambam/parallel/la-GenericInputControlStreamInfo.lo libmaus2/fastx/la-NameInfoBase.lo libmaus2/bambam/parallel/la-RefIdInterval.lo libmaus2/fastx/la-RefPathToken.lo libmaus2/fastx/la-RefPathTokenVector.lo libmaus2/dazzler/db/la-FastaInfo.lo libmaus2/dazzler/db/la-IndexBase.lo libmaus2/dazzler/db/la-DatabaseFile.lo libmaus2/dazzler/db/la-Read.lo libmaus2/dazzler/align/la-Path.lo libmaus2/dazzler/align/la-Overlap.lo libmaus2/lcs/la-AlignmentStatistics.lo libmaus2/fastx/la-SingleWordDNABitBuffer.lo libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.lo libmaus2/lcs/la-AlignerFactory.lo libmaus2/lcs/la-BandedAlignerFactory.lo libmaus2/aio/la-InputStreamInstance.lo libmaus2/lcs/la-DalignerNP.lo libmaus2/aio/la-OutputStreamInstance.lo libmaus2/aio/la-OutputStreamFactoryContainer.lo libmaus2/dazzler/align/la-TraceBlock.lo libmaus2/dazzler/align/la-ApproximateRun.lo libmaus2/suffixsort/la-BwtMergeBlockSortRequest.lo libmaus2/dazzler/align/la-OverlapMeta.lo libmaus2/lcs/la-DalignerLocalAlignment.lo libmaus2/dazzler/align/la-Tandem.lo libmaus2/dazzler/align/la-TandemVector.lo libmaus2/math/la-GmpInteger.lo libmaus2/math/la-GmpFloat.lo libmaus2/dazzler/align/la-TracePoint.lo libmaus2/lz/la-XzDecoder.lo libmaus2/util/la-ArgParser.lo libmaus2/lcs/la-FragmentEnvelopeYScore.lo libmaus2/lcs/la-FragmentEnvelopeFragment.lo libmaus2/fastx/la-DNAIndexMetaDataSequence.lo libmaus2/fastx/la-DNAIndexMetaData.lo libmaus2/bambam/la-PileVectorElement.lo libmaus2/digest/la-SHA3_256.lo libmaus2/fastx/la-DNAIndexMetaDataBigBand.lo libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.lo libmaus2/lcs/la-EnvelopeFragment.lo libmaus2/rank/la-DNARankBiDirRange.lo libmaus2/lcs/la-NNPTraceElement.lo libmaus2/lcs/la-NNPTraceContainer.lo libmaus2/lcs/la-NNPAlignResult.lo libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeGapRequest.lo libmaus2/suffixsort/bwtb3m/la-BwtMergeSort.lo libmaus2/suffixsort/bwtb3m/la-BwtComputeSSA.lo libmaus2/fastx/la-FastAToCompact4BigBand.lo libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.lo libmaus2/util/la-HugePages.lo libmaus2/lz/la-ZlibInterface.lo libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.lo libmaus2/aio/la-FileRemoval.lo libmaus2/rank/la-DNARankMEM.lo libmaus2/lcs/la-ChainAddQueueElement.lo libmaus2/lcs/la-Chain.lo libmaus2/lcs/la-ChainNode.lo libmaus2/lcs/la-ChainNodeInfo.lo libmaus2/lcs/la-ChainRemoveQueueElement.lo libmaus2/lcs/la-ChainSplayTreeNode.lo libmaus2/timing/la-RealTimeClock.lo libmaus2/aio/la-PosixFdOutputStreamFactory.lo libmaus2/dazzler/align/la-OverlapHeader.lo libmaus2/bambam/la-BamAlignment.lo libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.lo libmaus2/util/la-Command.lo libmaus2/util/la-CommandContainer.lo libmaus2/aio/la-InputOutputStreamInstance.lo libmaus2/dazzler/align/la-OverlapInfo.lo libmaus2/dazzler/align/la-OverlapDataInterface.lo libmaus2/util/la-PathTools.lo libmaus2/exception/la-LibMausException.lo -ldl -lz -lrt -lz libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu/crti.o /usr/lib/gcc/s390x-linux-gnu/9/crtbeginS.o libmaus2/.libs/la-StaticInitialization.o libmaus2/autoarray/.libs/la-AutoArray.o libmaus2/bitio/.libs/la-CompactArray.o libmaus2/rank/.libs/la-RankTable.o libmaus2/rank/.libs/la-log2table.o libmaus2/fastx/.libs/la-isFastQ.o libmaus2/wavelet/.libs/la-toWaveletTreeBits.o libmaus2/suffixsort/.libs/la-divsufsort.o libmaus2/rmq/.libs/la-FischerSystematicSuccinctRMQ.o libmaus2/lcp/.libs/la-OracleLCP.o libmaus2/util/.libs/la-StackTrace.o libmaus2/lcs/.libs/la-OverlapComputation.o libmaus2/lcs/.libs/la-HashContainer.o libmaus2/lcs/.libs/la-HashContainer2.o libmaus2/digest/.libs/la-md5.o libmaus2/util/.libs/la-I386CacheLineSize.o libmaus2/math/.libs/la-primes16.o libmaus2/util/.libs/la-OutputFileNameTools.o libmaus2/select/.libs/la-ESelectBase.o libmaus2/bambam/.libs/la-CigarStringParser.o libmaus2/graph/.libs/la-EdgeList.o libmaus2/fastx/.libs/la-Phred.o libmaus2/network/.libs/la-sendReceiveFd.o libmaus2/lz/.libs/la-SnappyCompress.o libmaus2/bambam/.libs/la-CollatingBamDecoder.o libmaus2/bambam/.libs/la-ReadEndsContainer.o libmaus2/bambam/.libs/la-ReadEnds.o libmaus2/huffman/.libs/la-IndexLoaderBase.o libmaus2/bambam/.libs/la-BamAlignmentDecoderBase.o libmaus2/bambam/.libs/la-StrCmpNum.o libmaus2/huffman/.libs/la-KvInitResult.o libmaus2/fm/.libs/la-MausFmToBwaConversion.o libmaus2/util/.libs/la-TempFileNameGenerator.o libmaus2/util/.libs/la-TempFileNameGeneratorState.o libmaus2/util/.libs/la-ArgInfo.o libmaus2/util/.libs/la-Array832.o libmaus2/util/.libs/la-Array864.o libmaus2/util/.libs/la-BitList.o libmaus2/util/.libs/la-VarBitList.o libmaus2/util/.libs/la-Concat.o libmaus2/util/.libs/la-ConcatRequest.o libmaus2/util/.libs/la-ConsoleColor.o libmaus2/util/.libs/la-Demangle.o libmaus2/util/.libs/la-DynamicLoading.o libmaus2/util/.libs/la-GetFileSize.o libmaus2/util/.libs/la-Histogram.o libmaus2/util/.libs/la-HistogramSet.o libmaus2/util/.libs/la-IncreasingList.o libmaus2/util/.libs/la-IntervalTree.o libmaus2/util/.libs/la-GenericIntervalTree.o libmaus2/util/.libs/la-LogPipe.o libmaus2/util/.libs/la-LogPipeMultiplex.o libmaus2/util/.libs/la-LogPipeMultiplexGeneric.o libmaus2/util/.libs/la-LookupIntervalTree.o libmaus2/digest/.libs/la-md5_interface.o libmaus2/util/.libs/la-MemLimit.o libmaus2/util/.libs/la-MemUsage.o libmaus2/util/.libs/la-NearestNeighbourDictionary.o libmaus2/util/.libs/la-NegativeDifferenceArray32.o libmaus2/util/.libs/la-NegativeDifferenceArray64.o libmaus2/util/.libs/la-nstat.o libmaus2/util/.libs/la-PositiveDifferenceArray32.o libmaus2/util/.libs/la-PositiveDifferenceArray64.o libmaus2/util/.libs/la-PosixExecute.o libmaus2/util/.libs/la-PosixFileDescriptor.o libmaus2/util/.libs/la-PosixInputFile.o libmaus2/util/.libs/la-SaturatingCounter.o libmaus2/util/.libs/la-StringSerialisation.o libmaus2/util/.libs/la-SuccinctBorderArray.o libmaus2/util/.libs/la-Terminal.o libmaus2/util/.libs/la-OctetString.o libmaus2/util/.libs/la-Utf8String.o libmaus2/util/.libs/la-Utf8BlockIndexDecoder.o libmaus2/util/.libs/la-Utf8BlockIndex.o libmaus2/util/.libs/la-Utf8DecoderBuffer.o libmaus2/util/.libs/la-Utf8DecoderWrapper.o libmaus2/suffixtree/.libs/la-CompressedSuffixTree.o libmaus2/bambam/.libs/la-AlignmentValidity.o libmaus2/bambam/.libs/la-BamFlagBase.o libmaus2/bambam/.libs/la-ReadGroup.o libmaus2/bambam/.libs/la-DuplicationMetrics.o libmaus2/bambam/.libs/la-BamDefaultAdapters.o libmaus2/bambam/.libs/la-BamRange.o libmaus2/graph/.libs/la-GraphEdge.o libmaus2/bambam/.libs/la-BamIndexBinChunk.o libmaus2/bambam/.libs/la-BamIndexLinearChunk.o libmaus2/huffman/.libs/la-HuffmanTree.o libmaus2/bambam/.libs/la-BamAlignmentDecoderInfo.o libmaus2/lz/.libs/la-Lz4Base.o libmaus2/lz/.libs/la-Lz4Compress.o libmaus2/lz/.libs/la-Lz4DecoderBuffer.o libmaus2/lz/.libs/la-lz4.o libmaus2/fm/.libs/la-BidirectionalIndexInterval.o libmaus2/fm/.libs/la-BidirectionalIndexIntervalSymbol.o libmaus2/gamma/.libs/la-SparseGammaGapFileIndexDecoderEntry.o libmaus2/fastx/.libs/la-FastALineParserLineInfo.o libmaus2/fastx/.libs/la-FastAMatchTable.o libmaus2/lcs/.libs/la-EditDistanceResult.o libmaus2/fastx/.libs/la-FastABgzfIndexEntry.o libmaus2/fastx/.libs/la-FastABgzfIndex.o libmaus2/parallel/.libs/la-ThreadWorkPackage.o libmaus2/parallel/.libs/la-SimpleThreadWorkPackage.o libmaus2/lz/.libs/la-RAZFIndex.o libmaus2/fastx/.libs/la-FastAIndexEntry.o libmaus2/fastx/.libs/la-FastAIndex.o libmaus2/network/.libs/la-HttpAbsoluteUrl.o libmaus2/hashing/.libs/la-Crc32.o libmaus2/hashing/.libs/la-MurmurHash3.o libmaus2/lz/.libs/la-IGzipDeflate.o libmaus2/lcs/.libs/la-LocalBaseConstants.o libmaus2/lcs/.libs/la-LocalEditDistanceResult.o libmaus2/bambam/.libs/la-BamHeaderParserStateBase.o libmaus2/bambam/.libs/la-GeneFlatFile.o libmaus2/bambam/.libs/la-GeneFlatFileEntry.o libmaus2/trie/.libs/la-SimpleTrie.o libmaus2/network/.libs/la-GnuTLSInit.o libmaus2/network/.libs/la-GnuTLSSocket.o libmaus2/bambam/.libs/la-BamStreamingMarkDuplicatesSupport.o libmaus2/alignment/.libs/la-FactorMatchInfo.o libmaus2/alignment/.libs/la-KmerInfo.o libmaus2/bambam/.libs/la-SamInfoBase.o libmaus2/digest/.libs/la-SHA1.o libmaus2/digest/.libs/la-SHA2_224.o libmaus2/digest/.libs/la-SHA2_256.o libmaus2/digest/.libs/la-SHA2_384.o libmaus2/digest/.libs/la-SHA2_512.o libmaus2/digest/.libs/la-CRC32.o libmaus2/digest/.libs/la-CRC32C_Core.o libmaus2/digest/.libs/la-CRC32C.o libmaus2/digest/.libs/la-CRC32_Core.o libmaus2/bambam/parallel/.libs/la-ValidationFragment.o libmaus2/bambam/parallel/.libs/la-GenericInputControlStreamInfo.o libmaus2/fastx/.libs/la-NameInfoBase.o libmaus2/bambam/parallel/.libs/la-RefIdInterval.o libmaus2/fastx/.libs/la-RefPathToken.o libmaus2/fastx/.libs/la-RefPathTokenVector.o libmaus2/dazzler/db/.libs/la-FastaInfo.o libmaus2/dazzler/db/.libs/la-IndexBase.o libmaus2/dazzler/db/.libs/la-DatabaseFile.o libmaus2/dazzler/db/.libs/la-Read.o libmaus2/dazzler/align/.libs/la-Path.o libmaus2/dazzler/align/.libs/la-Overlap.o libmaus2/lcs/.libs/la-AlignmentStatistics.o libmaus2/fastx/.libs/la-SingleWordDNABitBuffer.o libmaus2/util/.libs/la-LongestIncreasingSubsequenceExtendedResult.o libmaus2/lcs/.libs/la-AlignerFactory.o libmaus2/lcs/.libs/la-BandedAlignerFactory.o libmaus2/aio/.libs/la-InputStreamInstance.o libmaus2/lcs/.libs/la-DalignerNP.o libmaus2/aio/.libs/la-OutputStreamInstance.o libmaus2/aio/.libs/la-OutputStreamFactoryContainer.o libmaus2/dazzler/align/.libs/la-TraceBlock.o libmaus2/dazzler/align/.libs/la-ApproximateRun.o libmaus2/suffixsort/.libs/la-BwtMergeBlockSortRequest.o libmaus2/dazzler/align/.libs/la-OverlapMeta.o libmaus2/lcs/.libs/la-DalignerLocalAlignment.o libmaus2/dazzler/align/.libs/la-Tandem.o libmaus2/dazzler/align/.libs/la-TandemVector.o libmaus2/math/.libs/la-GmpInteger.o libmaus2/math/.libs/la-GmpFloat.o libmaus2/dazzler/align/.libs/la-TracePoint.o libmaus2/lz/.libs/la-XzDecoder.o libmaus2/util/.libs/la-ArgParser.o libmaus2/lcs/.libs/la-FragmentEnvelopeYScore.o libmaus2/lcs/.libs/la-FragmentEnvelopeFragment.o libmaus2/fastx/.libs/la-DNAIndexMetaDataSequence.o libmaus2/fastx/.libs/la-DNAIndexMetaData.o libmaus2/bambam/.libs/la-PileVectorElement.o libmaus2/digest/.libs/la-SHA3_256.o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBand.o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBandBiDir.o libmaus2/lcs/.libs/la-EnvelopeFragment.o libmaus2/rank/.libs/la-DNARankBiDirRange.o libmaus2/lcs/.libs/la-NNPTraceElement.o libmaus2/lcs/.libs/la-NNPTraceContainer.o libmaus2/lcs/.libs/la-NNPAlignResult.o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeGapRequest.o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSort.o libmaus2/suffixsort/bwtb3m/.libs/la-BwtComputeSSA.o libmaus2/fastx/.libs/la-FastAToCompact4BigBand.o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSortResult.o libmaus2/util/.libs/la-HugePages.o libmaus2/lz/.libs/la-ZlibInterface.o libmaus2/suffixsort/bwtb3m/.libs/la-BwtSelectSSA.o libmaus2/aio/.libs/la-FileRemoval.o libmaus2/rank/.libs/la-DNARankMEM.o libmaus2/lcs/.libs/la-ChainAddQueueElement.o libmaus2/lcs/.libs/la-Chain.o libmaus2/lcs/.libs/la-ChainNode.o libmaus2/lcs/.libs/la-ChainNodeInfo.o libmaus2/lcs/.libs/la-ChainRemoveQueueElement.o libmaus2/lcs/.libs/la-ChainSplayTreeNode.o libmaus2/timing/.libs/la-RealTimeClock.o libmaus2/aio/.libs/la-PosixFdOutputStreamFactory.o libmaus2/dazzler/align/.libs/la-OverlapHeader.o libmaus2/bambam/.libs/la-BamAlignment.o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeInput.o libmaus2/util/.libs/la-Command.o libmaus2/util/.libs/la-CommandContainer.o libmaus2/aio/.libs/la-InputOutputStreamInstance.o libmaus2/dazzler/align/.libs/la-OverlapInfo.o libmaus2/dazzler/align/.libs/la-OverlapDataInterface.o libmaus2/util/.libs/la-PathTools.o libmaus2/exception/.libs/la-LibMausException.o -ldl -lrt -lz -L/usr/lib/gcc/s390x-linux-gnu/9 -L/usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu -L/usr/lib/gcc/s390x-linux-gnu/9/../../../../lib -L/lib/s390x-linux-gnu -L/lib/../lib -L/usr/lib/s390x-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/s390x-linux-gnu/9/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/s390x-linux-gnu/9/crtendS.o /usr/lib/gcc/s390x-linux-gnu/9/../../../s390x-linux-gnu/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2.so.2 -o .libs/libmaus2.so.2.0.611 libtool: link: (cd ".libs" && rm -f "libmaus2.so.2" && ln -s "libmaus2.so.2.0.611" "libmaus2.so.2") libtool: link: (cd ".libs" && rm -f "libmaus2.so" && ln -s "libmaus2.so.2.0.611" "libmaus2.so") libtool: link: ar cru .libs/libmaus2.a libmaus2/la-StaticInitialization.o libmaus2/autoarray/la-AutoArray.o libmaus2/bitio/la-CompactArray.o libmaus2/rank/la-RankTable.o libmaus2/rank/la-log2table.o libmaus2/fastx/la-isFastQ.o libmaus2/wavelet/la-toWaveletTreeBits.o libmaus2/suffixsort/la-divsufsort.o libmaus2/rmq/la-FischerSystematicSuccinctRMQ.o libmaus2/lcp/la-OracleLCP.o libmaus2/util/la-StackTrace.o libmaus2/lcs/la-OverlapComputation.o libmaus2/lcs/la-HashContainer.o libmaus2/lcs/la-HashContainer2.o libmaus2/digest/la-md5.o libmaus2/util/la-I386CacheLineSize.o libmaus2/math/la-primes16.o libmaus2/util/la-OutputFileNameTools.o libmaus2/select/la-ESelectBase.o libmaus2/bambam/la-CigarStringParser.o libmaus2/graph/la-EdgeList.o libmaus2/fastx/la-Phred.o libmaus2/network/la-sendReceiveFd.o libmaus2/lz/la-SnappyCompress.o libmaus2/bambam/la-CollatingBamDecoder.o libmaus2/bambam/la-ReadEndsContainer.o libmaus2/bambam/la-ReadEnds.o libmaus2/huffman/la-IndexLoaderBase.o libmaus2/bambam/la-BamAlignmentDecoderBase.o libmaus2/bambam/la-StrCmpNum.o libmaus2/huffman/la-KvInitResult.o libmaus2/fm/la-MausFmToBwaConversion.o libmaus2/util/la-TempFileNameGenerator.o libmaus2/util/la-TempFileNameGeneratorState.o libmaus2/util/la-ArgInfo.o libmaus2/util/la-Array832.o libmaus2/util/la-Array864.o libmaus2/util/la-BitList.o libmaus2/util/la-VarBitList.o libmaus2/util/la-Concat.o libmaus2/util/la-ConcatRequest.o libmaus2/util/la-ConsoleColor.o libmaus2/util/la-Demangle.o libmaus2/util/la-DynamicLoading.o libmaus2/util/la-GetFileSize.o libmaus2/util/la-Histogram.o libmaus2/util/la-HistogramSet.o libmaus2/util/la-IncreasingList.o libmaus2/util/la-IntervalTree.o libmaus2/util/la-GenericIntervalTree.o libmaus2/util/la-LogPipe.o libmaus2/util/la-LogPipeMultiplex.o libmaus2/util/la-LogPipeMultiplexGeneric.o libmaus2/util/la-LookupIntervalTree.o libmaus2/digest/la-md5_interface.o libmaus2/util/la-MemLimit.o libmaus2/util/la-MemUsage.o libmaus2/util/la-NearestNeighbourDictionary.o libmaus2/util/la-NegativeDifferenceArray32.o libmaus2/util/la-NegativeDifferenceArray64.o libmaus2/util/la-nstat.o libmaus2/util/la-PositiveDifferenceArray32.o libmaus2/util/la-PositiveDifferenceArray64.o libmaus2/util/la-PosixExecute.o libmaus2/util/la-PosixFileDescriptor.o libmaus2/util/la-PosixInputFile.o libmaus2/util/la-SaturatingCounter.o libmaus2/util/la-StringSerialisation.o libmaus2/util/la-SuccinctBorderArray.o libmaus2/util/la-Terminal.o libmaus2/util/la-OctetString.o libmaus2/util/la-Utf8String.o libmaus2/util/la-Utf8BlockIndexDecoder.o libmaus2/util/la-Utf8BlockIndex.o libmaus2/util/la-Utf8DecoderBuffer.o libmaus2/util/la-Utf8DecoderWrapper.o libmaus2/suffixtree/la-CompressedSuffixTree.o libmaus2/bambam/la-AlignmentValidity.o libmaus2/bambam/la-BamFlagBase.o libmaus2/bambam/la-ReadGroup.o libmaus2/bambam/la-DuplicationMetrics.o libmaus2/bambam/la-BamDefaultAdapters.o libmaus2/bambam/la-BamRange.o libmaus2/graph/la-GraphEdge.o libmaus2/bambam/la-BamIndexBinChunk.o libmaus2/bambam/la-BamIndexLinearChunk.o libmaus2/huffman/la-HuffmanTree.o libmaus2/bambam/la-BamAlignmentDecoderInfo.o libmaus2/lz/la-Lz4Base.o libmaus2/lz/la-Lz4Compress.o libmaus2/lz/la-Lz4DecoderBuffer.o libmaus2/lz/la-lz4.o libmaus2/fm/la-BidirectionalIndexInterval.o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.o libmaus2/gamma/la-SparseGammaGapFileIndexDecoderEntry.o libmaus2/fastx/la-FastALineParserLineInfo.o libmaus2/fastx/la-FastAMatchTable.o libmaus2/lcs/la-EditDistanceResult.o libmaus2/fastx/la-FastABgzfIndexEntry.o libmaus2/fastx/la-FastABgzfIndex.o libmaus2/parallel/la-ThreadWorkPackage.o libmaus2/parallel/la-SimpleThreadWorkPackage.o libmaus2/lz/la-RAZFIndex.o libmaus2/fastx/la-FastAIndexEntry.o libmaus2/fastx/la-FastAIndex.o libmaus2/network/la-HttpAbsoluteUrl.o libmaus2/hashing/la-Crc32.o libmaus2/hashing/la-MurmurHash3.o libmaus2/lz/la-IGzipDeflate.o libmaus2/lcs/la-LocalBaseConstants.o libmaus2/lcs/la-LocalEditDistanceResult.o libmaus2/bambam/la-BamHeaderParserStateBase.o libmaus2/bambam/la-GeneFlatFile.o libmaus2/bambam/la-GeneFlatFileEntry.o libmaus2/trie/la-SimpleTrie.o libmaus2/network/la-GnuTLSInit.o libmaus2/network/la-GnuTLSSocket.o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.o libmaus2/alignment/la-FactorMatchInfo.o libmaus2/alignment/la-KmerInfo.o libmaus2/bambam/la-SamInfoBase.o libmaus2/digest/la-SHA1.o libmaus2/digest/la-SHA2_224.o libmaus2/digest/la-SHA2_256.o libmaus2/digest/la-SHA2_384.o libmaus2/digest/la-SHA2_512.o libmaus2/digest/la-CRC32.o libmaus2/digest/la-CRC32C_Core.o libmaus2/digest/la-CRC32C.o libmaus2/digest/la-CRC32_Core.o libmaus2/bambam/parallel/la-ValidationFragment.o libmaus2/bambam/parallel/la-GenericInputControlStreamInfo.o libmaus2/fastx/la-NameInfoBase.o libmaus2/bambam/parallel/la-RefIdInterval.o libmaus2/fastx/la-RefPathToken.o libmaus2/fastx/la-RefPathTokenVector.o libmaus2/dazzler/db/la-FastaInfo.o libmaus2/dazzler/db/la-IndexBase.o libmaus2/dazzler/db/la-DatabaseFile.o libmaus2/dazzler/db/la-Read.o libmaus2/dazzler/align/la-Path.o libmaus2/dazzler/align/la-Overlap.o libmaus2/lcs/la-AlignmentStatistics.o libmaus2/fastx/la-SingleWordDNABitBuffer.o libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.o libmaus2/lcs/la-AlignerFactory.o libmaus2/lcs/la-BandedAlignerFactory.o libmaus2/aio/la-InputStreamInstance.o libmaus2/lcs/la-DalignerNP.o libmaus2/aio/la-OutputStreamInstance.o libmaus2/aio/la-OutputStreamFactoryContainer.o libmaus2/dazzler/align/la-TraceBlock.o libmaus2/dazzler/align/la-ApproximateRun.o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.o libmaus2/dazzler/align/la-OverlapMeta.o libmaus2/lcs/la-DalignerLocalAlignment.o libmaus2/dazzler/align/la-Tandem.o libmaus2/dazzler/align/la-TandemVector.o libmaus2/math/la-GmpInteger.o libmaus2/math/la-GmpFloat.o libmaus2/dazzler/align/la-TracePoint.o libmaus2/lz/la-XzDecoder.o libmaus2/util/la-ArgParser.o libmaus2/lcs/la-FragmentEnvelopeYScore.o libmaus2/lcs/la-FragmentEnvelopeFragment.o libmaus2/fastx/la-DNAIndexMetaDataSequence.o libmaus2/fastx/la-DNAIndexMetaData.o libmaus2/bambam/la-PileVectorElement.o libmaus2/digest/la-SHA3_256.o libmaus2/fastx/la-DNAIndexMetaDataBigBand.o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.o libmaus2/lcs/la-EnvelopeFragment.o libmaus2/rank/la-DNARankBiDirRange.o libmaus2/lcs/la-NNPTraceElement.o libmaus2/lcs/la-NNPTraceContainer.o libmaus2/lcs/la-NNPAlignResult.o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeGapRequest.o libmaus2/suffixsort/bwtb3m/la-BwtMergeSort.o libmaus2/suffixsort/bwtb3m/la-BwtComputeSSA.o libmaus2/fastx/la-FastAToCompact4BigBand.o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.o libmaus2/util/la-HugePages.o libmaus2/lz/la-ZlibInterface.o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.o libmaus2/aio/la-FileRemoval.o libmaus2/rank/la-DNARankMEM.o libmaus2/lcs/la-ChainAddQueueElement.o libmaus2/lcs/la-Chain.o libmaus2/lcs/la-ChainNode.o libmaus2/lcs/la-ChainNodeInfo.o libmaus2/lcs/la-ChainRemoveQueueElement.o libmaus2/lcs/la-ChainSplayTreeNode.o libmaus2/timing/la-RealTimeClock.o libmaus2/aio/la-PosixFdOutputStreamFactory.o libmaus2/dazzler/align/la-OverlapHeader.o libmaus2/bambam/la-BamAlignment.o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.o libmaus2/util/la-Command.o libmaus2/util/la-CommandContainer.o libmaus2/aio/la-InputOutputStreamInstance.o libmaus2/dazzler/align/la-OverlapInfo.o libmaus2/dazzler/align/la-OverlapDataInterface.o libmaus2/util/la-PathTools.o libmaus2/exception/la-LibMausException.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmaus2.a libtool: link: ( cd ".libs" && rm -f "libmaus2.la" && ln -s "../libmaus2.la" "libmaus2.la" ) /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testAIO test/testAIO-testAIO.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbitbtree test/testbitbtree-testbitbtree.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testBitIO test/testBitIO-testBitIO.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbtree test/testbtree-testbtree.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testAIO test/testAIO-testAIO.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testBitIO test/testBitIO-testBitIO.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbitbtree test/testbitbtree-testbitbtree.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbtree test/testbtree-testbtree.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testBWTDyn test/testBWTDyn-testBWTDyn.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testBWTHufDyn test/testBWTHufDyn-testBWTHufDyn.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testDivSufSort test/testDivSufSort-testDivSufSort.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testDNABitWords test/testDNABitWords-testDNABitWords.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testBWTDyn test/testBWTDyn-testBWTDyn.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testBWTHufDyn test/testBWTHufDyn-testBWTHufDyn.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testDNABitWords test/testDNABitWords-testDNABitWords.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testDivSufSort test/testDivSufSort-testDivSufSort.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testFastRead test/testFastRead-testFastRead.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testHuffman test/testHuffman-testHuffman.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testIsa test/testIsa-testIsa.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testkmp test/testkmp-testkmp.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testFastRead test/testFastRead-testFastRead.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testHuffman test/testHuffman-testHuffman.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testIsa test/testIsa-testIsa.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testkmp test/testkmp-testkmp.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlz test/testlz-testlz.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testOS test/testOS-testOS.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testRank test/testRank-testRank.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testToWaveletTreeBits test/testToWaveletTreeBits-testToWaveletTreeBits.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlz test/testlz-testlz.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testOS test/testOS-testOS.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testRank test/testRank-testRank.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testToWaveletTreeBits test/testToWaveletTreeBits-testToWaveletTreeBits.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testWaveletExternal test/testWaveletExternal-testWaveletExternal.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testTrie test/testTrie-testTrie.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbandedlcs test/testbandedlcs-testbandedlcs.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamwriter test/testbamwriter-testbamwriter.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testWaveletExternal test/testWaveletExternal-testWaveletExternal.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testTrie test/testTrie-testTrie.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbandedlcs test/testbandedlcs-testbandedlcs.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamwriter test/testbamwriter-testbamwriter.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testhashlcs test/testhashlcs-testhashlcs.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testarraydecode test/testarraydecode-testarraydecode.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsnappy test/testsnappy-testsnappy.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsnappyconcat test/testsnappyconcat-testsnappyconcat.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testhashlcs test/testhashlcs-testhashlcs.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testarraydecode test/testarraydecode-testarraydecode.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsnappy test/testsnappy-testsnappy.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testgunzip test/testgunzip-testgunzip.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testregex test/testregex-testregex.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsnappyconcat test/testsnappyconcat-testsnappyconcat.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testhashcollisions test/testhashcollisions-testhashcollisions.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsimplebloomcollisions test/testsimplebloomcollisions-testsimplebloomcollisions.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testgunzip test/testgunzip-testgunzip.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testregex test/testregex-testregex.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testhashcollisions test/testhashcollisions-testhashcollisions.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsimplehash test/testsimplehash-testsimplehash.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsimplecountinghash test/testsimplecountinghash-testsimplecountinghash.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsimplebloomcollisions test/testsimplebloomcollisions-testsimplebloomcollisions.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsyncreorderset test/testsyncreorderset-testsyncreorderset.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testcachealignedalloc test/testcachealignedalloc-testcachealignedalloc.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsimplehash test/testsimplehash-testsimplehash.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsimplecountinghash test/testsimplecountinghash-testsimplecountinghash.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsyncreorderset test/testsyncreorderset-testsyncreorderset.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testblocksynchronous test/testblocksynchronous-testblocksynchronous.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsyncfastreaderbase test/testsyncfastreaderbase-testsyncfastreaderbase.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testcachealignedalloc test/testcachealignedalloc-testcachealignedalloc.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdl test/testdl-testdl.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdifenc test/testdifenc-testdifenc.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testblocksynchronous test/testblocksynchronous-testblocksynchronous.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsyncfastreaderbase test/testsyncfastreaderbase-testsyncfastreaderbase.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdl test/testdl-testdl.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbwtmergeinternal test/testbwtmergeinternal-testbwtmergeinternal.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdifenc test/testdifenc-testdifenc.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastarewrite test/testfastarewrite-testfastarewrite.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastarecode test/testfastarecode-testfastarecode.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -ldl -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamtofastq test/testbamtofastq-testbamtofastq.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbwtmergeinternal test/testbwtmergeinternal-testbwtmergeinternal.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastarewrite test/testfastarewrite-testfastarewrite.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastarecode test/testfastarecode-testfastarecode.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamrange test/testbamrange-testbamrange.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamtofastq test/testbamtofastq-testbamtofastq.o -ldl ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamdamage test/testbamdamage-testbamdamage.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testgamma test/testgamma-testgamma.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamrange test/testbamrange-testbamrange.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamdamage test/testbamdamage-testbamdamage.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testgamma test/testgamma-testgamma.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testcompact test/testcompact-testcompact.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbytetocompact test/testbytetocompact-testbytetocompact.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testscramtosam test/testscramtosam-testscramtosam.o libmaus2_irods.a libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testpacdecode test/testpacdecode-testpacdecode.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testcompact test/testcompact-testcompact.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbytetocompact test/testbytetocompact-testbytetocompact.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testscramtosam test/testscramtosam-testscramtosam.o libmaus2_irods.a ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testutf8split test/testutf8split-testutf8split.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testpacdecode test/testpacdecode-testpacdecode.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testcirchash test/testcirchash-testcirchash.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testrmmtree test/testrmmtree-testrmmtree.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testcst test/testcst-testcst.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testutf8split test/testutf8split-testutf8split.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testcirchash test/testcirchash-testcirchash.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testrmmtree test/testrmmtree-testrmmtree.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testcst test/testcst-testcst.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamcmp test/testbamcmp-testbamcmp.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamdif test/testbamdif-testbamdif.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testqreorder test/testqreorder-testqreorder.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfqbgzf test/testfqbgzf-testfqbgzf.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamdif test/testbamdif-testbamdif.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamcmp test/testbamcmp-testbamcmp.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testqreorder test/testqreorder-testqreorder.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfqbgzf test/testfqbgzf-testfqbgzf.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testoverlap test/testoverlap-testoverlap.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testcompactfastrandom test/testcompactfastrandom-testcompactfastrandom.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamindex test/testbamindex-testbamindex.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamrewrite test/testbamrewrite-testbamrewrite.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testoverlap test/testoverlap-testoverlap.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testcompactfastrandom test/testcompactfastrandom-testcompactfastrandom.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamindex test/testbamindex-testbamindex.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamrewrite test/testbamrewrite-testbamrewrite.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastqstream test/testfastqstream-testfastqstream.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsort test/testsort-testsort.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testexternalsort test/testexternalsort-testexternalsort.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testcollatespeed test/testcollatespeed-testcollatespeed.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsort test/testsort-testsort.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastqstream test/testfastqstream-testfastqstream.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testexternalsort test/testexternalsort-testexternalsort.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testcollatespeed test/testcollatespeed-testcollatespeed.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamheaderparser test/testbamheaderparser-testbamheaderparser.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbammergecoordinate test/testbammergecoordinate-testbammergecoordinate.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbammergecollate test/testbammergecollate-testbammergecollate.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamheaderparser test/testbamheaderparser-testbamheaderparser.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbammergequeryname test/testbammergequeryname-testbammergequeryname.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbammergecoordinate test/testbammergecoordinate-testbammergecoordinate.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbammergecollate test/testbammergecollate-testbammergecollate.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamcat test/testbamcat-testbamcat.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbammergequeryname test/testbammergequeryname-testbammergequeryname.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamcat test/testbamcat-testbamcat.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testautoarray2d test/testautoarray2d-testautoarray2d.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testhist test/testhist-testhist.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastaparse test/testfastaparse-testfastaparse.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testautoarray2d test/testautoarray2d-testautoarray2d.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testvalidatebamindex test/testvalidatebamindex-testvalidatebamindex.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testhist test/testhist-testhist.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testeditdistance test/testeditdistance-testeditdistance.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastaparse test/testfastaparse-testfastaparse.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testthreadpool test/testthreadpool-testthreadpool.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testvalidatebamindex test/testvalidatebamindex-testvalidatebamindex.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsimplethreadpool test/testsimplethreadpool-testsimplethreadpool.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testeditdistance test/testeditdistance-testeditdistance.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testthreadpool test/testthreadpool-testthreadpool.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testthreadpoolbamdecode test/testthreadpoolbamdecode-testthreadpoolbamdecode.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsimplethreadpoolbamdecode test/testsimplethreadpoolbamdecode-testsimplethreadpoolbamdecode.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsimplethreadpool test/testsimplethreadpool-testsimplethreadpool.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testgaparraybyte test/testgaparraybyte-testgaparraybyte.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testzlibconcat test/testzlibconcat-testzlibconcat.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testthreadpoolbamdecode test/testthreadpoolbamdecode-testthreadpoolbamdecode.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsimplethreadpoolbamdecode test/testsimplethreadpoolbamdecode-testsimplethreadpoolbamdecode.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testgaparraybyte test/testgaparraybyte-testgaparraybyte.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testzlibconcat test/testzlibconcat-testzlibconcat.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsimplecompressblock test/testsimplecompressblock-testsimplecompressblock.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testrazdec test/testrazdec-testrazdec.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfaindex test/testfaindex-testfaindex.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsimplecompressblock test/testsimplecompressblock-testsimplecompressblock.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testrazdec test/testrazdec-testrazdec.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastablockrecode test/testfastablockrecode-testfastablockrecode.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfaindex test/testfaindex-testfaindex.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testhttp test/testhttp-testhttp.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testftp test/testftp-testftp.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testrlhist test/testrlhist-testrlhist.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastablockrecode test/testfastablockrecode-testfastablockrecode.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testhttp test/testhttp-testhttp.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testftp test/testftp-testftp.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testnumcpus test/testnumcpus-testnumcpus.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testrlhist test/testrlhist-testrlhist.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdiag test/testdiag-testdiag.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlinuxstreamingwrite test/testlinuxstreamingwrite-testlinuxstreamingwrite.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlowmembamheaderparser test/testlowmembamheaderparser-testlowmembamheaderparser.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testnumcpus test/testnumcpus-testnumcpus.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testgeneflatfile test/testgeneflatfile-testgeneflatfile.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdiag test/testdiag-testdiag.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlinuxstreamingwrite test/testlinuxstreamingwrite-testlinuxstreamingwrite.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlowmembamheaderparser test/testlowmembamheaderparser-testlowmembamheaderparser.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testurlinputstream test/testurlinputstream-testurlinputstream.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsimpletrie test/testsimpletrie-testsimpletrie.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testgeneflatfile test/testgeneflatfile-testgeneflatfile.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testgnutls test/testgnutls-testgnutls.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testurlinputstream test/testurlinputstream-testurlinputstream.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlru test/testlru-testlru.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsimpletrie test/testsimpletrie-testsimpletrie.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o teststronglyconnectedcomponents test/teststronglyconnectedcomponents-teststronglyconnectedcomponents.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbytecnt test/testbytecnt-testbytecnt.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testgnutls test/testgnutls-testgnutls.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlru test/testlru-testlru.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testtopologicalsorting test/testtopologicalsorting-testtopologicalsorting.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlinebuffer test/testlinebuffer-testlinebuffer.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/teststronglyconnectedcomponents test/teststronglyconnectedcomponents-teststronglyconnectedcomponents.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbytecnt test/testbytecnt-testbytecnt.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsamdecoder test/testsamdecoder-testsamdecoder.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdecimalnumberparser test/testdecimalnumberparser-testdecimalnumberparser.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testtopologicalsorting test/testtopologicalsorting-testtopologicalsorting.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlinebuffer test/testlinebuffer-testlinebuffer.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testunsignedinteger test/testunsignedinteger-testunsignedinteger.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsamdecoder test/testsamdecoder-testsamdecoder.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testmd5 test/testmd5-testmd5.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdecimalnumberparser test/testdecimalnumberparser-testdecimalnumberparser.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testunsignedinteger test/testunsignedinteger-testunsignedinteger.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsha test/testsha-testsha.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la libmaus2digests.a libmaus2digests_sse4.a -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testmd5 test/testmd5-testmd5.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsinglefileserver test/testsinglefileserver-testsinglefileserver.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testparallelbamvalidation test/testparallelbamvalidation-testparallelbamvalidation.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testparallelbamrewrite test/testparallelbamrewrite-testparallelbamrewrite.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsha test/testsha-testsha.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so libmaus2digests.a libmaus2digests_sse4.a -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsinglefileserver test/testsinglefileserver-testsinglefileserver.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testparallelbamvalidation test/testparallelbamvalidation-testparallelbamvalidation.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbammateerase test/testbammateerase-testbammateerase.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testparallelbamrewrite test/testparallelbamrewrite-testparallelbamrewrite.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testparallelbamblocksort test/testparallelbamblocksort-testparallelbamblocksort.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl libmaus2seqchksumsfactory.a libmaus2digests.a libmaus2digests_sse4.a -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbammateerase test/testbammateerase-testbammateerase.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testmapperm test/testmapperm-testmapperm.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testparallelbamblocksort test/testparallelbamblocksort-testparallelbamblocksort.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl libmaus2seqchksumsfactory.a libmaus2digests.a libmaus2digests_sse4.a -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testexternalmemoryindex test/testexternalmemoryindex-testexternalmemoryindex.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastqtobam test/testfastqtobam-testfastqtobam.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testmapperm test/testmapperm-testmapperm.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testexternalmemoryindex test/testexternalmemoryindex-testexternalmemoryindex.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastqtobam test/testfastqtobam-testfastqtobam.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsamrecoding test/testsamrecoding-testsamrecoding.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdazzlerdb test/testdazzlerdb-testdazzlerdb.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsamrecoding test/testsamrecoding-testsamrecoding.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testnd test/testnd-testnd.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdazzlerdb test/testdazzlerdb-testdazzlerdb.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testnd test/testnd-testnd.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastashred test/testfastashred-testfastashred.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testalignerspeed test/testalignerspeed-testalignerspeed.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastasingleline test/testfastasingleline-testfastasingleline.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastashred test/testfastashred-testfastashred.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testalignerspeed test/testalignerspeed-testalignerspeed.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdazzleralignmentrewrite test/testdazzleralignmentrewrite-testdazzleralignmentrewrite.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastasingleline test/testfastasingleline-testfastasingleline.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testxz test/testxz-testxz.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdazzlerindex test/testdazzlerindex-testdazzlerindex.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testargparser test/testargparser-testargparser.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdazzleralignmentrewrite test/testdazzleralignmentrewrite-testdazzleralignmentrewrite.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfragmentenvelope test/testfragmentenvelope-testfragmentenvelope.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testxz test/testxz-testxz.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdazzlerindex test/testdazzlerindex-testdazzlerindex.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testargparser test/testargparser-testargparser.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdnarank test/testdnarank-testdnarank.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlowbits test/testlowbits-testlowbits.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfastaexplode test/testfastaexplode-testfastaexplode.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfragmentenvelope test/testfragmentenvelope-testfragmentenvelope.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testfaextract test/testfaextract-testfaextract.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdnarank test/testdnarank-testdnarank.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlowbits test/testlowbits-testlowbits.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfastaexplode test/testfastaexplode-testfastaexplode.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testmurmur3 test/testmurmur3-testmurmur3.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testfaextract test/testfaextract-testfaextract.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testpairalign test/testpairalign-testpairalign.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsplaytree test/testsplaytree-testsplaytree.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbwtconstruction test/testbwtconstruction-testbwtconstruction.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testmurmur3 test/testmurmur3-testmurmur3.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testpairalign test/testpairalign-testpairalign.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbwtconstructionfasta test/testbwtconstructionfasta-testbwtconstructionfasta.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsplaytree test/testsplaytree-testsplaytree.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbwtconstruction test/testbwtconstruction-testbwtconstruction.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testarrayinput test/testarrayinput-testarrayinput.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testhugepages test/testhugepages-testhugepages.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbwtconstructionfasta test/testbwtconstructionfasta-testbwtconstructionfasta.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsymcnt test/testsymcnt-testsymcnt.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testarrayinput test/testarrayinput-testarrayinput.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testhugepages test/testhugepages-testhugepages.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testgammapd test/testgammapd-testgammapd.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testpo test/testpo-testpo.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testdnasuffixtrav test/testdnasuffixtrav-testdnasuffixtrav.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsymcnt test/testsymcnt-testsymcnt.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testgammapd test/testgammapd-testgammapd.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testpo test/testpo-testpo.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testdnasuffixtrav test/testdnasuffixtrav-testdnasuffixtrav.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testserialisedsorting test/testserialisedsorting-testserialisedsorting.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamnumericalindex test/testbamnumericalindex-testbamnumericalindex.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testnpl test/testnpl-testnpl.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testkcnt test/testkcnt-testkcnt.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testserialisedsorting test/testserialisedsorting-testserialisedsorting.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamnumericalindex test/testbamnumericalindex-testbamnumericalindex.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testnpl test/testnpl-testnpl.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testintervaltree test/testintervaltree-testintervaltree.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testkcnt test/testkcnt-testkcnt.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testbamgetrefreg test/testbamgetrefreg-testbamgetrefreg.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o teststringgraph test/teststringgraph-teststringgraph.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testintervaltree test/testintervaltree-testintervaltree.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlognormal test/testlognormal-testlognormal.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testConstantSumCombinatorics test/testConstantSumCombinatorics-testConstantSumCombinatorics.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testbamgetrefreg test/testbamgetrefreg-testbamgetrefreg.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/teststringgraph test/teststringgraph-teststringgraph.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlognormal test/testlognormal-testlognormal.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testConstantSumCombinatorics test/testConstantSumCombinatorics-testConstantSumCombinatorics.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testmatrix test/testmatrix-testmatrix.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlibarchive test/testlibarchive-testlibarchive.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testconvpowercache test/testconvpowercache-testconvpowercache.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la libmaus2fftw.a -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testlassort test/testlassort-testlassort.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testmatrix test/testmatrix-testmatrix.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlibarchive test/testlibarchive-testlibarchive.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testconvpowercache test/testconvpowercache-testconvpowercache.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so libmaus2fftw.a -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testlassort test/testlassort-testlassort.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testthreadpoolbgzfdecode test/testthreadpoolbgzfdecode-testthreadpoolbgzfdecode.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testnnplocalaligner test/testnnplocalaligner-testnnplocalaligner.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic -o testsuffixtreenum test/testsuffixtreenum-testsuffixtreenum.o libmaus2.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -ldl -lrt -lz libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testthreadpoolbgzfdecode test/testthreadpoolbgzfdecode-testthreadpoolbgzfdecode.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testnnplocalaligner test/testnnplocalaligner-testnnplocalaligner.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -rdynamic -o .libs/testsuffixtreenum test/testsuffixtreenum-testsuffixtreenum.o ./.libs/libmaus2.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -ldl -lrt -lz -fopenmp -pthread make[3]: Leaving directory '/<>/src' Making all in test make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/test' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in src make[2]: Entering directory '/<>/src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/src' Making check in test make[2]: Entering directory '/<>/test' make check-TESTS make[3]: Entering directory '/<>/test' make[4]: Entering directory '/<>/test' PASS: testarrayinput.sh PASS: testargparser.sh PASS: testarraydecode.sh PASS: testautoarray2d.sh PASS: testbitbtree.sh PASS: testdnarank.sh PASS: testintervaltree.sh PASS: testAIO.sh PASS: testBitIO.sh FAIL: testRank.sh =========================================== libmaus2 2.0.611: test/test-suite.log =========================================== # TOTAL: 10 # PASS: 9 # SKIP: 0 # XFAIL: 0 # FAIL: 1 # XPASS: 0 # ERROR: 0 .. contents:: :depth: 2 FAIL: testRank.sh ================= /<>/test /<>/test /<>/test [V] testing FastRank...done. [V] testing RunLengthBitVector...done. [V] testing E2Append: [V]rank class libmaus2::rank::ERank222BAppend writer type libmaus2::bitio::BitWriterTemplate data type unsigned long [V] loop 1 [V] libmaus2::rank::ERank222BAppendDynamic loop 1 [V] loop 2 [V] libmaus2::rank::ERank222BAppendDynamic loop 2 [V] loop 3 [V] libmaus2::rank::ERank222BAppendDynamic loop 3 [V] loop 4 [V] libmaus2::rank::ERank222BAppendDynamic loop 4 [V] loop 5 [V] libmaus2::rank::ERank222BAppendDynamic loop 5 [V] testing WaveletTree rank/select random (size 128)...done. [V] testing WaveletTree smaller/larger...done. [V] testing CacheLineRank: [V] Filling vector...(2.38419e-07)done, time 364.934M/s [V] Copying vector...(1.49012e-08)(0.25)(0.5)(0.75)done, time 177.507M/s [V] Checking vector...(1.49012e-08)(0.25)(0.5)(0.75)done, time 197.952M/s [V] Checking external...done. [V] Checking rank/select...done. [V] Setting up erank...done, time 11099.5M/s [V] Setting up random probe vector...done, time 12.7402M/s [V] Running probes on CLR...(1)(2)(3)(4)(5)(6)(7)(8)(9)(10)(11)(12)(13)(14)(15)(16)(17)(18)(19)(20)(21)(22)(23)(24)(25)(26)(27)(28)(29)(30)(31)(32)(33)(34)(35)(36)(37)(38)(39)(40)(41)(42)(43)(44)(45)(46)(47)(48)(49)(50)done. [V] Running probes on erank...(1)(2)(3)(4)(5)(6)(7)(8)(9)(10)(11)(12)(13)(14)(15)(16)(17)(18)(19)(20)(21)(22)(23)(24)(25)(26)(27)(28)(29)(30)(31)(32)(33)(34)(35)(36)(37)(38)(39)(40)(41)(42)(43)(44)(45)(46)(47)(48)(49)(50)done. [V] mega queries/s: CLR=131.745 erank=119.204 v=30025664 [V] testing WaveletTree RnvGenericQuick...done. [V] testing permutation order access on QuickWaveletTree...(0)(1)(2)(3)(4)(5)(6)(7)(8)(9)(10)done [V] testing enum symbols on WaveletTree...done [V] testing rank/select on WaveletTree (small sequence)...done. [V] testing WaveletTree rank/select random (size 1k)...done. [V] testing RMQ on wavelet tree...9(9);9(9);9(9);1(1);0(0);3(3);2(2);4(4);7(7);6(6);8(8);5(5);11(11); done. [V] checking BPS... [V] checking BitWriterStream8/FastWriteBitWriterStream8...slow: 94048 fast: 43998 done. [V] checking BitWriterStream64/FastWriteBitWriterStream64...checking libmaus2::bitio::FastWriteBitWriterTemplate > >, 9223372036854775808ul, 18446744073709551615ul, true> and libmaus2::bitio::BitWriterTemplate > >, 9223372036854775808ul> slow: 672850 fast: 88848 buf: 95246 done. [V] checking binary rank/select [V]checking rank class libmaus2::rank::ERank3C writer type libmaus2::bitio::FastWriteBitWriterTemplate data type unsigned short [V]libmaus2::rank::ERank3C loops 10 vecsize 10485760 check OK [V]t_rank=2284288 per op 2.17847e-08 ops per sec 4.59038e+07 [V]t_select=29416802 ops 1.04858e+08 per op 2.8054e-07 ops per sec 3.56455e+06 [V]checking rank class libmaus2::rank::ERank222B writer type libmaus2::bitio::BitWriterTemplate data type unsigned long [V]libmaus2::rank::ERank222B loops 10 vecsize 10485760 check OK [V]t_rank=491676 per op 4.68899e-09 ops per sec 2.13266e+08 [V]t_select=12055648 ops 1.04858e+08 per op 1.14972e-07 ops per sec 8.6978e+06 [V] rank class libmaus2::select::ESelect222B writer type libmaus2::bitio::BitWriterTemplate data type unsigned long [V] libmaus2::select::ESelect222B loops 10 vecsize 10485760 check OK [V] t_select=1802230 ops 5.25195e+07 per op 3.43155e-08 ops per sec 2.91414e+07 [V] rank class libmaus2::select::ESelect222B writer type libmaus2::bitio::BitWriterTemplate data type unsigned long [V] libmaus2::select::ESelect222B loops 10 vecsize 10485760 check OK [V] t_select=1777747 ops 5.32718e+07 per op 3.33713e-08 ops per sec 2.99659e+07 [V]checking rank class libmaus2::rank::ERank writer type libmaus2::bitio::BitWriterTemplate data type unsigned char testRank: test/testRank.cpp:174: bool checkE2(unsigned int) [with eclass = libmaus2::rank::ERank]: Assertion `E2.rank1(j) == c' failed. ./testRank.sh: line 7: 787 Aborted (core dumped) ../src/testRank Exiting with return code 134 FAIL testRank.sh (exit status: 134) ============================================================================ Testsuite summary for libmaus2 2.0.611 ============================================================================ # TOTAL: 10 # PASS: 9 # SKIP: 0 # XFAIL: 0 # FAIL: 1 # XPASS: 0 # ERROR: 0 ============================================================================ See test/test-suite.log Please report to tischler@mpi-cbg.de ============================================================================ make[4]: *** [Makefile:699: test-suite.log] Error 1 make[4]: Leaving directory '/<>/test' make[3]: *** [Makefile:807: check-TESTS] Error 2 make[3]: Leaving directory '/<>/test' make[2]: *** [Makefile:943: check-am] Error 2 make[2]: Leaving directory '/<>/test' make[1]: *** [Makefile:680: check-recursive] Error 1 make[1]: Leaving directory '/<>' dh_auto_test: make -j4 check VERBOSE=1 returned exit code 2 make: *** [debian/rules:12: build-arch] Error 255 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20200105-1220 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build-Space: 2982536 Build-Time: 876 Distribution: focal Fail-Stage: build Host Architecture: s390x Install-Time: 5 Job: libmaus2_2.0.611-1.dsc Machine Architecture: s390x Package: libmaus2 Package-Time: 882 Source-Version: 2.0.611-1 Space: 2982536 Status: attempted Version: 2.0.611-1 -------------------------------------------------------------------------------- Finished at 20200105-1220 Build needed 00:14:42, 2982536k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=s390x PACKAGEBUILD-18320142 Scanning for processes to kill in build PACKAGEBUILD-18320142