https://launchpad.net/ubuntu/+archive/test-rebuild-20191220-focal/+build/18342288 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lgw01-amd64-023 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:45:04 UTC 2019 x86_64 Buildd toolchain package versions: launchpad-buildd_183 python-lpbuildd_183 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 5 Jan 10:42:41 ntpdate[1910]: adjust time server 10.211.37.1 offset 0.032495 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18342288 --image-type chroot /home/buildd/filecache-default/e96c25c651525abc9f0cabeb95ea71010abf4ecb Creating target for build PACKAGEBUILD-18342288 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18342288 Starting target for build PACKAGEBUILD-18342288 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18342288 'deb http://ftpmaster.internal/ubuntu focal main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-18342288 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18342288 Updating target for build PACKAGEBUILD-18342288 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 Packages [966 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main Translation-en [499 kB] Get:4 http://ftpmaster.internal/ubuntu focal/restricted amd64 Packages [18.4 kB] Get:5 http://ftpmaster.internal/ubuntu focal/restricted Translation-en [5768 B] Get:6 http://ftpmaster.internal/ubuntu focal/universe amd64 Packages [8671 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5195 kB] Get:8 http://ftpmaster.internal/ubuntu focal/multiverse amd64 Packages [152 kB] Get:9 http://ftpmaster.internal/ubuntu focal/multiverse Translation-en [110 kB] Fetched 15.9 MB in 3s (5505 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libhogweed5 libisl22 libnettle7 libperl5.30 perl-modules-5.30 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils bzip2 cpp-9 debianutils fdisk g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libitm1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblsan0 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev lsb-base mount ncurses-base ncurses-bin perl perl-base sensible-utils systemd systemd-sysv sysvinit-utils util-linux 94 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. Need to get 70.2 MB of archives. After this operation, 51.0 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main amd64 libc6-dev amd64 2.30-0ubuntu3 [2549 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 libc-dev-bin amd64 2.30-0ubuntu3 [71.8 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main amd64 linux-libc-dev amd64 5.3.0-24.26 [1096 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main amd64 libisl22 amd64 0.22-2 [592 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 libcc1-0 amd64 9.2.1-21ubuntu1 [49.0 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main amd64 binutils-x86-64-linux-gnu amd64 2.33.1-6ubuntu3 [1639 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main amd64 libbinutils amd64 2.33.1-6ubuntu3 [474 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main amd64 binutils-common amd64 2.33.1-6ubuntu3 [203 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main amd64 binutils amd64 2.33.1-6ubuntu3 [3400 B] Get:10 http://ftpmaster.internal/ubuntu focal/main amd64 gcc-9-base amd64 9.2.1-21ubuntu1 [19.1 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main amd64 libgcc1 amd64 1:9.2.1-21ubuntu1 [40.8 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main amd64 libgomp1 amd64 9.2.1-21ubuntu1 [89.3 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main amd64 libitm1 amd64 9.2.1-21ubuntu1 [28.1 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main amd64 libatomic1 amd64 9.2.1-21ubuntu1 [9236 B] Get:15 http://ftpmaster.internal/ubuntu focal/main amd64 libasan5 amd64 9.2.1-21ubuntu1 [395 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main amd64 liblsan0 amd64 9.2.1-21ubuntu1 [139 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main amd64 libtsan0 amd64 9.2.1-21ubuntu1 [301 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main amd64 libubsan1 amd64 9.2.1-21ubuntu1 [130 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main amd64 libquadmath0 amd64 9.2.1-21ubuntu1 [146 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main amd64 g++-9 amd64 9.2.1-21ubuntu1 [11.0 MB] Get:21 http://ftpmaster.internal/ubuntu focal/main amd64 libstdc++-9-dev amd64 9.2.1-21ubuntu1 [1709 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main amd64 libgcc-9-dev amd64 9.2.1-21ubuntu1 [2362 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main amd64 gcc-9 amd64 9.2.1-21ubuntu1 [10.4 MB] Get:24 http://ftpmaster.internal/ubuntu focal/main amd64 cpp-9 amd64 9.2.1-21ubuntu1 [9729 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main amd64 libstdc++6 amd64 9.2.1-21ubuntu1 [512 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main amd64 libc6 amd64 2.30-0ubuntu3 [2725 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main amd64 base-files amd64 11ubuntu2 [60.1 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main amd64 debianutils amd64 4.9.1 [85.8 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main amd64 bash amd64 5.0-5ubuntu1 [639 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main amd64 bsdutils amd64 1:2.34-0.1ubuntu4 [63.8 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main amd64 gzip amd64 1.10-0ubuntu4 [95.3 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main amd64 hostname amd64 3.23 [11.4 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main amd64 ncurses-bin amd64 6.1+20191019-1ubuntu1 [172 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main amd64 perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main amd64 libperl5.30 amd64 5.30.0-9 [3950 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main amd64 perl amd64 5.30.0-9 [224 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main amd64 perl-base amd64 5.30.0-9 [1511 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main amd64 bzip2 amd64 1.0.8-2 [34.1 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main amd64 libbz2-1.0 amd64 1.0.8-2 [32.3 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main amd64 libblkid1 amd64 2.34-0.1ubuntu4 [137 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main amd64 libuuid1 amd64 2.34-0.1ubuntu4 [20.5 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main amd64 libfdisk1 amd64 2.34-0.1ubuntu4 [175 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre2-8-0 amd64 10.34-7 [197 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main amd64 libselinux1 amd64 3.0-1 [68.7 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main amd64 libmount1 amd64 2.34-0.1ubuntu4 [149 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main amd64 libncurses6 amd64 6.1+20191019-1ubuntu1 [101 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main amd64 libtinfo6 amd64 6.1+20191019-1ubuntu1 [85.9 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main amd64 libncursesw6 amd64 6.1+20191019-1ubuntu1 [132 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main amd64 libsmartcols1 amd64 2.34-0.1ubuntu4 [101 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main amd64 fdisk amd64 2.34-0.1ubuntu4 [120 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main amd64 util-linux amd64 2.34-0.1ubuntu4 [1022 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main amd64 libdebconfclient0 amd64 0.250ubuntu2 [6336 B] Get:53 http://ftpmaster.internal/ubuntu focal/main amd64 base-passwd amd64 3.5.47 [47.7 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main amd64 libc-bin amd64 2.30-0ubuntu3 [625 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main amd64 ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main amd64 lsb-base all 11.1.0ubuntu2 [12.1 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main amd64 sysvinit-utils amd64 2.96-1ubuntu1 [20.8 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main amd64 liblz4-1 amd64 1.9.2-2 [55.9 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main amd64 systemd-sysv amd64 244-3ubuntu1 [9368 B] Get:60 http://ftpmaster.internal/ubuntu focal/main amd64 libacl1 amd64 2.2.53-5ubuntu1 [18.7 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main amd64 libapparmor1 amd64 2.13.3-7ubuntu1 [34.3 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main amd64 libaudit-common all 1:2.8.5-2ubuntu5 [4076 B] Get:63 http://ftpmaster.internal/ubuntu focal/main amd64 libcap-ng0 amd64 0.7.9-2.1 [11.1 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main amd64 libaudit1 amd64 1:2.8.5-2ubuntu5 [39.1 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main amd64 libcap2 amd64 1:2.27-1 [14.1 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main amd64 libudev1 amd64 244-3ubuntu1 [76.3 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main amd64 libdevmapper1.02.1 amd64 2:1.02.155-2ubuntu7 [127 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main amd64 libjson-c4 amd64 0.13.1+dfsg-6 [29.2 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main amd64 libcryptsetup12 amd64 2:2.2.2-1ubuntu1 [182 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main amd64 libnettle7 amd64 3.5.1+really3.5.1-2 [114 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main amd64 libhogweed5 amd64 3.5.1+really3.5.1-2 [138 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main amd64 libp11-kit0 amd64 0.23.18.1-2 [189 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main amd64 libtasn1-6 amd64 4.15.0-2 [37.7 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main amd64 libgnutls30 amd64 3.6.11.1-2 [793 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main amd64 libkmod2 amd64 26-3ubuntu1 [42.9 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main amd64 libpam0g amd64 1.3.1-5ubuntu4 [55.4 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main amd64 libseccomp2 amd64 2.4.2-2ubuntu1 [39.4 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main amd64 mount amd64 2.34-0.1ubuntu4 [115 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main amd64 systemd amd64 244-3ubuntu1 [3677 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main amd64 libsystemd0 amd64 244-3ubuntu1 [260 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main amd64 libzstd1 amd64 1.4.4+dfsg-1 [237 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main amd64 libapt-pkg5.90 amd64 1.9.5 [851 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main amd64 libgcrypt20 amd64 1.8.5-3ubuntu1 [419 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main amd64 gpgv amd64 2.2.17-3ubuntu1 [200 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main amd64 apt amd64 1.9.5 [1281 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-modules-bin amd64 1.3.1-5ubuntu4 [37.7 kB] Get:87 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-modules amd64 1.3.1-5ubuntu4 [250 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main amd64 libattr1 amd64 1:2.4.48-5 [12.7 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-runtime all 1.3.1-5ubuntu4 [37.3 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main amd64 libsepol1 amd64 3.0-1 [252 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main amd64 libsemanage-common all 3.0-1 [9880 B] Get:92 http://ftpmaster.internal/ubuntu focal/main amd64 libsemanage1 amd64 3.0-1 [85.3 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main amd64 sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main amd64 libsqlite3-0 amd64 3.30.1-1ubuntu1 [540 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main amd64 gpg amd64 2.2.17-3ubuntu1 [479 kB] Get:96 http://ftpmaster.internal/ubuntu focal/main amd64 gpgconf amd64 2.2.17-3ubuntu1 [124 kB] Get:97 http://ftpmaster.internal/ubuntu focal/main amd64 gpg-agent amd64 2.2.17-3ubuntu1 [232 kB] Get:98 http://ftpmaster.internal/ubuntu focal/main amd64 liblockfile-bin amd64 1.16-1.1 [11.7 kB] Get:99 http://ftpmaster.internal/ubuntu focal/main amd64 liblockfile1 amd64 1.16-1.1 [6680 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 70.2 MB in 1s (79.6 MB/s) (Reading database ... 12741 files and directories currently installed.) 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Setting up libtsan0:amd64 (9.2.1-21ubuntu1) ... Setting up gpg-agent (2.2.17-3ubuntu1) ... Installing new version of config file /etc/logcheck/ignore.d.server/gpg-agent ... Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket -> /usr/lib/systemd/user/gpg-agent-browser.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket -> /usr/lib/systemd/user/gpg-agent-extra.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket -> /usr/lib/systemd/user/gpg-agent-ssh.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent.socket -> /usr/lib/systemd/user/gpg-agent.socket. Setting up binutils (2.33.1-6ubuntu3) ... Setting up libgcc-9-dev:amd64 (9.2.1-21ubuntu1) ... Setting up perl (5.30.0-9) ... Setting up cpp-9 (9.2.1-21ubuntu1) ... Setting up libc6-dev:amd64 (2.30-0ubuntu3) ... Setting up libcryptsetup12:amd64 (2:2.2.2-1ubuntu1) ... Setting up gcc-9 (9.2.1-21ubuntu1) ... Setting up libstdc++-9-dev:amd64 (9.2.1-21ubuntu1) ... Setting up systemd (244-3ubuntu1) ... Installing new version of config file /etc/dhcp/dhclient-enter-hooks.d/resolved ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up g++-9 (9.2.1-21ubuntu1) ... Setting up systemd-sysv (244-3ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18342288 amd64 focal -c chroot:build-PACKAGEBUILD-18342288 --arch=amd64 --dist=focal --nolog -A pynn_0.7.4-1.1.dsc Initiating build PACKAGEBUILD-18342288 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:45:04 UTC 2019 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-023.buildd +==============================================================================+ | pynn 0.7.4-1.1 (amd64) 05 Jan 2020 10:43 | +==============================================================================+ Package: pynn Version: 0.7.4-1.1 Source Version: 0.7.4-1.1 Distribution: focal Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/pynn-kzAfRZ/pynn-0.7.4' with '<>' I: NOTICE: Log filtering will replace 'build/pynn-kzAfRZ' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18342288/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- pynn_0.7.4-1.1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-7a5usX/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-7a5usX/apt_archive ./ InRelease Get:2 copy:/<>/resolver-7a5usX/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-7a5usX/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-7a5usX/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-7a5usX/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (222 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-7a5usX/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14652 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 7.0.50~), python, dh-python, python-numpy, python-nose, python-mock, python-cheetah, python-jinja2 Filtered Build-Depends: debhelper (>= 7.0.50~), python, dh-python, python-numpy, python-nose, python-mock, python-cheetah, python-jinja2 dpkg-deb: building package 'sbuild-build-depends-pynn-dummy' in '/<>/resolver-swUO9s/apt_archive/sbuild-build-depends-pynn-dummy.deb'. Ign:1 copy:/<>/resolver-swUO9s/apt_archive ./ InRelease Get:2 copy:/<>/resolver-swUO9s/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-swUO9s/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-swUO9s/apt_archive ./ Sources [252 B] Get:5 copy:/<>/resolver-swUO9s/apt_archive ./ Packages [572 B] Fetched 2943 B in 0s (228 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install pynn build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0 libcroco3 libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libicu63 liblapack3 libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db mime-support po-debconf python python-cheetah python-funcsigs python-jinja2 python-markupsafe python-minimal python-mock python-nose python-numpy python-pbr python-pkg-resources python-setuptools python-six python2 python2-minimal python2.7 python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal python3.7 python3.7-minimal Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk python-cheetah-doc python-markdown python-memcache python-pygments python-funcsigs-doc python-jinja2-doc python-mock-doc python-coverage python-nose-doc gfortran python-dev python-pytest python-numpy-dbg python-numpy-doc python-setuptools-doc python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3.7-venv python3.7-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0 libcroco3 libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libicu63 liblapack3 libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db mime-support po-debconf python python-cheetah python-funcsigs python-jinja2 python-markupsafe python-minimal python-mock python-nose python-numpy python-pbr python-pkg-resources python-setuptools python-six python2 python2-minimal python2.7 python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal python3.7 python3.7-minimal sbuild-build-depends-pynn-dummy 0 upgraded, 71 newly installed, 0 to remove and 0 not upgraded. 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in 1s (55.7 MB/s) Selecting previously unselected package libpython3.7-minimal:amd64. 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Setting up libicu63:amd64 (63.2-2) ... Setting up libpython2.7-stdlib:amd64 (2.7.17-1) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:amd64 (3.9.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up libgfortran5:amd64 (9.2.1-21ubuntu1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-8ubuntu1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-1) ... Setting up libpython3.7-stdlib:amd64 (3.7.5-2) ... Setting up liblapack3:amd64 (3.9.0-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up python2.7 (2.7.17-1) ... Setting up libtool (2.4.6-11) ... Setting up libpython2-stdlib:amd64 (2.7.17-1) ... Setting up m4 (1.4.18-4) ... Setting up python2 (2.7.17-1) ... Setting up libpython-stdlib:amd64 (2.7.17-1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up python-cheetah (3.2.4-1) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up python-markupsafe (1.1.0-1build1) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dh-strip-nondeterminism (1.6.3-1) ... Setting up python-funcsigs (1.0.2-4build1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up python (2.7.17-1) ... Setting up libpython3-stdlib:amd64 (3.7.5-1ubuntu1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.5-2) ... Setting up gettext (0.19.8.1-10) ... Setting up python-pkg-resources (41.4.0-1) ... Setting up python3 (3.7.5-1ubuntu1) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python-jinja2 (2.10-2ubuntu2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python-six (1.12.0-2build1) ... Setting up python-setuptools (41.4.0-1) ... Setting up python-pbr (5.4.4-0ubuntu1) ... update-alternatives: using /usr/bin/python2-pbr to provide /usr/bin/pbr (pbr) in auto mode Setting up python3-lib2to3 (3.8.0-1) ... Setting up python3-distutils (3.8.0-1) ... Setting up dh-python (4.20191017ubuntu1) ... Setting up python-numpy (1:1.16.5-1ubuntu2) ... Setting up python-nose (1.3.7-4) ... Setting up po-debconf (1.0.21) ... Setting up python-mock (3.0.5-1) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.7.1ubuntu1) ... Setting up sbuild-build-depends-pynn-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-170-generic amd64 (x86_64) Toolchain package versions: binutils_2.33.1-6ubuntu3 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-21ubuntu1 gcc-9_9.2.1-21ubuntu1 libc6-dev_2.30-0ubuntu3 libstdc++-9-dev_9.2.1-21ubuntu1 libstdc++6_9.2.1-21ubuntu1 linux-libc-dev_5.3.0-24.26 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.5 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11ubuntu2 base-passwd_3.5.47 bash_5.0-5ubuntu1 binutils_2.33.1-6ubuntu3 binutils-common_2.33.1-6ubuntu3 binutils-x86-64-linux-gnu_2.33.1-6ubuntu3 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu4 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 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libaudit-common_1:2.8.5-2ubuntu5 libaudit1_1:2.8.5-2ubuntu5 libbinutils_2.33.1-6ubuntu3 libblas3_3.9.0-1 libblkid1_2.34-0.1ubuntu4 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-0ubuntu3 libc-dev-bin_2.30-0ubuntu3 libc6_2.30-0ubuntu3 libc6-dev_2.30-0ubuntu3 libcap-ng0_0.7.9-2.1 libcap2_1:2.27-1 libcc1-0_9.2.1-21ubuntu1 libcom-err2_1.45.3-4ubuntu2 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.2-1ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.250ubuntu2 libdebhelper-perl_12.7.1ubuntu1 libdevmapper1.02.1_2:1.02.155-2ubuntu7 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.3-4ubuntu2 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu4 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.3-1 libgcc-9-dev_9.2.1-21ubuntu1 libgcc1_1:9.2.1-21ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_9.2.1-21ubuntu1 libglib2.0-0_2.63.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.11.1-2 libgomp1_9.2.1-21ubuntu1 libgpg-error0_1.36-7 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libisl22_0.22-2 libitm1_9.2.1-21ubuntu1 libjson-c4_0.13.1+dfsg-6 libkmod2_26-3ubuntu1 liblapack3_3.9.0-1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_9.2.1-21ubuntu1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1ubuntu4 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.1-3 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libpython-stdlib_2.7.17-1 libpython2-stdlib_2.7.17-1 libpython2.7-minimal_2.7.17-1 libpython2.7-stdlib_2.7.17-1 libpython3-stdlib_3.7.5-1ubuntu1 libpython3.7-minimal_3.7.5-2 libpython3.7-stdlib_3.7.5-2 libquadmath0_9.2.1-21ubuntu1 libreadline8_8.0-3 libseccomp2_2.4.2-2ubuntu1 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu4 libsqlite3-0_3.30.1-1ubuntu1 libss2_1.45.3-4ubuntu2 libssl1.1_1.1.1c-1ubuntu4 libstdc++-9-dev_9.2.1-21ubuntu1 libstdc++6_9.2.1-21ubuntu1 libsub-override-perl_0.09-2 libsystemd0_244-3ubuntu1 libtasn1-6_4.15.0-2 libtinfo6_6.1+20191019-1ubuntu1 libtool_2.4.6-11 libtsan0_9.2.1-21ubuntu1 libubsan1_9.2.1-21ubuntu1 libuchardet0_0.0.6-3 libudev1_244-3ubuntu1 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu4 libxml2_2.9.4+dfsg1-8ubuntu1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.3.0-24.26 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17ubuntu3 mime-support_3.64ubuntu1 mount_2.34-0.1ubuntu4 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 python_2.7.17-1 python-cheetah_3.2.4-1 python-funcsigs_1.0.2-4build1 python-jinja2_2.10-2ubuntu2 python-markupsafe_1.1.0-1build1 python-minimal_2.7.17-1 python-mock_3.0.5-1 python-nose_1.3.7-4 python-numpy_1:1.16.5-1ubuntu2 python-pbr_5.4.4-0ubuntu1 python-pkg-resources_41.4.0-1 python-setuptools_41.4.0-1 python-six_1.12.0-2build1 python2_2.7.17-1 python2-minimal_2.7.17-1 python2.7_2.7.17-1 python2.7-minimal_2.7.17-1 python3_3.7.5-1ubuntu1 python3-distutils_3.8.0-1 python3-lib2to3_3.8.0-1 python3-minimal_3.7.5-1ubuntu1 python3.7_3.7.5-2 python3.7-minimal_3.7.5-2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pynn-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_244-3ubuntu1 systemd-sysv_244-3ubuntu1 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 util-linux_2.34-0.1ubuntu4 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Aug 19 23:01:43 2015 UTC gpgv: using RSA key 3362F7031A4992E1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pynn_0.7.4-1.1.dsc dpkg-source: info: extracting pynn in pynn-0.7.4 dpkg-source: info: unpacking pynn_0.7.4.orig.tar.gz dpkg-source: info: unpacking pynn_0.7.4-1.1.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18342288 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18342288 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18342288 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package pynn dpkg-buildpackage: info: source version 0.7.4-1.1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python2 dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_clean dh_auto_clean: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_clean: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_clean: This feature will be removed in compat 12. pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions python setup.py clean -a running clean 'build/lib.linux-x86_64-2.7' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it find . -name \*.pyc -exec rm {} \+ dh_clean dh_clean: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules build dh build --with python2 dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_update_autotools_config dh_auto_configure dh_auto_configure: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_configure: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_configure: This feature will be removed in compat 12. dh_auto_build dh_auto_build: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_build: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_build: This feature will be removed in compat 12. pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions python setup.py build --force running build running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/pyNN copying src/common.py -> build/lib.linux-x86_64-2.7/pyNN copying src/neuroml2.py -> build/lib.linux-x86_64-2.7/pyNN copying src/neuroml.py -> build/lib.linux-x86_64-2.7/pyNN copying src/models.py -> build/lib.linux-x86_64-2.7/pyNN copying src/utility.py -> build/lib.linux-x86_64-2.7/pyNN copying src/multisim.py -> build/lib.linux-x86_64-2.7/pyNN copying src/core.py -> build/lib.linux-x86_64-2.7/pyNN copying src/errors.py -> build/lib.linux-x86_64-2.7/pyNN copying src/connectors.py -> build/lib.linux-x86_64-2.7/pyNN copying src/__init__.py -> build/lib.linux-x86_64-2.7/pyNN copying src/space.py -> build/lib.linux-x86_64-2.7/pyNN copying src/connectors2.py -> build/lib.linux-x86_64-2.7/pyNN copying src/random.py -> build/lib.linux-x86_64-2.7/pyNN creating build/lib.linux-x86_64-2.7/pyNN/nest copying src/nest/synapses.py -> build/lib.linux-x86_64-2.7/pyNN/nest copying src/nest/electrodes.py -> build/lib.linux-x86_64-2.7/pyNN/nest copying src/nest/connectors.py -> build/lib.linux-x86_64-2.7/pyNN/nest copying src/nest/cells.py -> build/lib.linux-x86_64-2.7/pyNN/nest copying src/nest/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/nest copying src/nest/recording.py -> build/lib.linux-x86_64-2.7/pyNN/nest copying src/nest/simulator.py -> build/lib.linux-x86_64-2.7/pyNN/nest creating build/lib.linux-x86_64-2.7/pyNN/pcsim copying src/pcsim/electrodes.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim copying src/pcsim/connectors.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim copying src/pcsim/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim copying src/pcsim/connectors_old.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim copying src/pcsim/recording.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim copying src/pcsim/simulator.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim creating build/lib.linux-x86_64-2.7/pyNN/neuron copying src/neuron/electrodes.py -> build/lib.linux-x86_64-2.7/pyNN/neuron copying src/neuron/connectors.py -> build/lib.linux-x86_64-2.7/pyNN/neuron copying src/neuron/nineml.py -> build/lib.linux-x86_64-2.7/pyNN/neuron copying src/neuron/cells.py -> build/lib.linux-x86_64-2.7/pyNN/neuron copying src/neuron/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/neuron copying src/neuron/recording.py -> build/lib.linux-x86_64-2.7/pyNN/neuron copying src/neuron/simulator.py -> build/lib.linux-x86_64-2.7/pyNN/neuron creating build/lib.linux-x86_64-2.7/pyNN/brian copying src/brian/electrodes.py -> build/lib.linux-x86_64-2.7/pyNN/brian copying src/brian/connectors.py -> build/lib.linux-x86_64-2.7/pyNN/brian copying src/brian/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/brian copying src/brian/recording.py -> build/lib.linux-x86_64-2.7/pyNN/brian copying src/brian/simulator.py -> build/lib.linux-x86_64-2.7/pyNN/brian creating build/lib.linux-x86_64-2.7/pyNN/recording copying src/recording/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/recording copying src/recording/files.py -> build/lib.linux-x86_64-2.7/pyNN/recording creating build/lib.linux-x86_64-2.7/pyNN/standardmodels copying src/standardmodels/synapses.py -> build/lib.linux-x86_64-2.7/pyNN/standardmodels copying src/standardmodels/cells.py -> build/lib.linux-x86_64-2.7/pyNN/standardmodels copying src/standardmodels/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/standardmodels creating build/lib.linux-x86_64-2.7/pyNN/descriptions copying src/descriptions/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/descriptions creating build/lib.linux-x86_64-2.7/pyNN/nest/standardmodels copying src/nest/standardmodels/synapses.py -> build/lib.linux-x86_64-2.7/pyNN/nest/standardmodels copying src/nest/standardmodels/cells.py -> build/lib.linux-x86_64-2.7/pyNN/nest/standardmodels copying src/nest/standardmodels/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/nest/standardmodels creating build/lib.linux-x86_64-2.7/pyNN/pcsim/standardmodels copying src/pcsim/standardmodels/synapses.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim/standardmodels copying src/pcsim/standardmodels/cells.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim/standardmodels copying src/pcsim/standardmodels/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/pcsim/standardmodels creating build/lib.linux-x86_64-2.7/pyNN/neuron/standardmodels copying src/neuron/standardmodels/synapses.py -> build/lib.linux-x86_64-2.7/pyNN/neuron/standardmodels copying src/neuron/standardmodels/cells.py -> build/lib.linux-x86_64-2.7/pyNN/neuron/standardmodels copying src/neuron/standardmodels/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/neuron/standardmodels creating build/lib.linux-x86_64-2.7/pyNN/brian/standardmodels copying src/brian/standardmodels/synapses.py -> build/lib.linux-x86_64-2.7/pyNN/brian/standardmodels copying src/brian/standardmodels/cells.py -> build/lib.linux-x86_64-2.7/pyNN/brian/standardmodels copying src/brian/standardmodels/__init__.py -> build/lib.linux-x86_64-2.7/pyNN/brian/standardmodels creating build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/refrac.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/tmgsyn.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/stdwa_guetig.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/stdwa_softlimits.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/hh_traub.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/gsfa_grr.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/expisyn.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/alphaisyn.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/stdwa_songabbott.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/netstim2.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/vecstim.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/alphasyn.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/tmisyn.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/adexp.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/reset.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl copying src/neuron/nmodl/stdwa_symm.mod -> build/lib.linux-x86_64-2.7/pyNN/neuron/nmodl creating build/lib.linux-x86_64-2.7/pyNN/descriptions/templates creating build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/cheetah copying src/descriptions/templates/cheetah/population_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/cheetah copying src/descriptions/templates/cheetah/assembly_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/cheetah copying src/descriptions/templates/cheetah/modeltype_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/cheetah copying src/descriptions/templates/cheetah/population_old.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/cheetah copying src/descriptions/templates/cheetah/synapsedynamics_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/cheetah copying src/descriptions/templates/cheetah/populationview_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/cheetah copying src/descriptions/templates/cheetah/projection_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/cheetah creating build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/jinja2 copying src/descriptions/templates/jinja2/population_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/jinja2 copying src/descriptions/templates/jinja2/assembly_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/jinja2 copying src/descriptions/templates/jinja2/modeltype_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/jinja2 copying src/descriptions/templates/jinja2/population_old.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/jinja2 copying src/descriptions/templates/jinja2/synapsedynamics_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/jinja2 copying src/descriptions/templates/jinja2/populationview_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/jinja2 copying src/descriptions/templates/jinja2/projection_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/jinja2 creating build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/string copying src/descriptions/templates/string/population_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/string copying src/descriptions/templates/string/assembly_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/string copying src/descriptions/templates/string/modeltype_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/string copying src/descriptions/templates/string/synapsedynamics_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/string copying src/descriptions/templates/string/populationview_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/string copying src/descriptions/templates/string/projection_default.txt -> build/lib.linux-x86_64-2.7/pyNN/descriptions/templates/string Unable to find nrnivmodl. It will not be possible to use the pyNN.neuron module. debian/rules override_dh_auto_test make[1]: Entering directory '/<>' for PYVER in `pyversions -d -r -v`; do \ PYTHONPATH=`/bin/ls -d /<>/build/lib.*-$PYVER` $PYTHON \ /usr/bin/nosetests -s -v --exclude='_(nest|neuron)' test/; done Failure: SkipTest () ... SKIP Failure: SkipTest () ... SKIP system.test_moose.test_recording ... SKIP system.test_moose.test_synaptic_connections ... SKIP Failure: SkipTest () ... SKIP system.test_pcsim.test_PoissonInputNeuron ... SKIP unittests.test_assembly.test_create_with_zero_populations ... ok unittests.test_assembly.test_create_with_one_population ... ok unittests.test_assembly.test_create_with_two_populations ... ok unittests.test_assembly.test_create_with_non_population_should_raise_Exception ... ok unittests.test_assembly.test_size_property ... ok unittests.test_assembly.test_positions_property ... ok unittests.test_assembly.test__len__ ... ok unittests.test_assembly.test_iter ... ok unittests.test_assembly.test__add__population ... ok unittests.test_assembly.test__add__assembly ... ok unittests.test_assembly.test_add_inplace_population ... ok unittests.test_assembly.test_add_inplace_assembly ... ok unittests.test_assembly.test_add_invalid_object ... ok unittests.test_assembly.test_initialize ... ok unittests.test_assembly.test_describe ... ok unittests.test_assembly.test_get_population ... ok unittests.test_assembly.test_all_cells ... ok unittests.test_assembly.test_local_cells ... ok unittests.test_assembly.test_mask_local ... ok unittests.test_assembly.test_save_positions ... ok unittests.test_basepopulation.test__getitem__int ... ok unittests.test_basepopulation.test__getitem__slice ... ok unittests.test_basepopulation.test__getitem__list ... ok unittests.test_basepopulation.test__getitem__tuple ... ok unittests.test_basepopulation.test__getitem__invalid ... ok unittests.test_basepopulation.test_len ... ok unittests.test_basepopulation.test_iter ... ok unittests.test_basepopulation.test_is_local ... ok unittests.test_basepopulation.test_all ... ok unittests.test_basepopulation.test_add ... ok unittests.test_basepopulation.test_get_cell_position ... ok unittests.test_basepopulation.test_set_cell_position ... ok unittests.test_basepopulation.test_get_cell_initial_value ... ok unittests.test_basepopulation.test_set_cell_initial_value ... ok unittests.test_basepopulation.test_nearest ... ok unittests.test_basepopulation.test_sample ... ok unittests.test_basepopulation.test_get_should_call_get_array_if_it_exists ... ok unittests.test_basepopulation.test_get_with_no_get_array ... ok unittests.test_basepopulation.test_get_with_gather ... ok unittests.test_basepopulation.test_set_from_dict ... ok unittests.test_basepopulation.test_set_from_pair ... ok unittests.test_basepopulation.test_set_invalid_type ... ok unittests.test_basepopulation.test_set_inconsistent_type ... ok unittests.test_basepopulation.test_set_with_no_get_array ... ok unittests.test_basepopulation.test_set_with_list ... ok unittests.test_basepopulation.test_tset_with_numeric_values ... ok unittests.test_basepopulation.test_tset_with_array_values ... ok Population.tset(): If the size of the valueArray does not match that of the Population, should raise an InvalidDimensionsError. ... ok unittests.test_basepopulation.test_tset_invalid_dimensions_1D ... ok Population.rset() ... ok unittests.test_basepopulation.test_rset_with_native_rng ... ok unittests.test_basepopulation.test_initialize ... ok unittests.test_basepopulation.test_initialize_random_distribution ... ok unittests.test_basepopulation.test_can_record ... ok unittests.test_basepopulation.test__record ... ok unittests.test_basepopulation.test__record_invalid_variable ... ok unittests.test_basepopulation.test_invalid_record_from ... ok unittests.test_basepopulation.test_spike_recording ... ok unittests.test_basepopulation.test_record_v ... ok unittests.test_basepopulation.test_record_gsyn ... ok unittests.test_basepopulation.test_printSpikes ... ok unittests.test_basepopulation.test_getSpikes ... ok unittests.test_basepopulation.test_print_v ... ok unittests.test_basepopulation.test_get_v ... ok unittests.test_basepopulation.test_print_gsyn ... ok unittests.test_basepopulation.test_get_gsyn ... ok unittests.test_basepopulation.test_get_spike_counts ... ok unittests.test_basepopulation.test_meanSpikeCount ... ok unittests.test_basepopulation.test_meanSpikeCount_on_slave_node ... ok unittests.test_basepopulation.test_inject ... ok unittests.test_basepopulation.test_inject_into_invalid_celltype ... ok unittests.test_basepopulation.test_save_positions ... ok unittests.test_connectors.TestAllToAllConnector.test_connect_with_distance_dependent_weights_parallel_safe ... ok unittests.test_connectors.TestAllToAllConnector.test_connect_with_random_weights_parallel_safe ... ok unittests.test_connectors.TestAllToAllConnector.test_connect_with_scalar_weights_and_delays ... ok unittests.test_connectors.TestAllToAllConnector.test_create_with_delays_None ... ok unittests.test_connectors.TestAllToAllConnector.test_create_with_delays_too_small ... ok unittests.test_connectors.TestAllToAllConnector.test_create_with_list_delays_too_small ... ok unittests.test_connectors.TestDistanceDependentProbabilityConnector.test_connect_with_default_args ... ERROR unittests.test_connectors.TestDistanceMatrix.test_really_simple0 ... ok unittests.test_connectors.TestDistanceMatrix.test_really_simple1 ... ok unittests.test_connectors.TestFixedNumberPostConnector.test_with_n_smaller_than_population_size ... ok unittests.test_connectors.TestFixedNumberPreConnector.test_with_n_smaller_than_population_size ... ok unittests.test_connectors.TestFixedProbabilityConnector.test_connect_with_default_args ... ok unittests.test_connectors.TestFromFileConnector.test_connect_with_standard_text_file_distributed ... ok unittests.test_connectors.TestFromFileConnector.test_connect_with_standard_text_file_not_distributed ... ok unittests.test_connectors.TestFromListConnector.test_connect_with_out_of_range_index ... ok unittests.test_connectors.TestFromListConnector.test_connect_with_valid_list ... ok unittests.test_connectors.TestOneToOneConnector.test_connect_with_random_weights ... ok unittests.test_connectors.TestOneToOneConnector.test_connect_with_scalar_weights_and_delays ... ok unittests.test_core.test_is_list_like_with_tuple ... ok unittests.test_core.test_is_list_like_with_list ... ok unittests.test_core.test_is_list_like_with_iterator ... ok unittests.test_core.test_is_list_like_with_set ... ok unittests.test_core.test_is_list_like_with_numpy_array ... ok unittests.test_core.test_is_list_like_with_string ... ok unittests.test_core.test_create_with_int ... ok unittests.test_core.test_create_with_float ... ok unittests.test_core.test_create_with_list ... ok unittests.test_core.test_create_with_array ... ok unittests.test_core.test_create_inconsistent ... ok unittests.test_core.test_create_with_string ... ok unittests.test_core.test_setitem_nonexpanded_same_value ... ok unittests.test_core.test_setitem_invalid_value ... ok unittests.test_core.test_setitem_nonexpanded_different_value ... ok unittests.test_core.test_columnwise_iteration_with_flat_array ... ok unittests.test_core.test_columnwise_iteration_with_structured_array ... ok unittests.test_core.test_columnwise_iteration_with_random_array_parallel_safe_no_mask ... ok unittests.test_core.test_columnwise_iteration_with_function ... ok unittests.test_core.test_columnwise_iteration_with_flat_array_and_mask ... ok unittests.test_core.test_columnwise_iteration_with_structured_array_and_mask ... ok unittests.test_core.test_columnwise_iteration_with_random_array_parallel_safe_with_mask ... ok unittests.test_core.test_as_array_with_flat_array ... ok unittests.test_core.test_as_array_with_structured_array ... ok unittests.test_core.test_as_array_with_functional_array ... ok unittests.test_core.test_iadd_with_flat_array ... ok unittests.test_core.test_add_with_flat_array ... ok unittests.test_core.test_lt_with_flat_array ... ok unittests.test_core.test_lt_with_structured_array ... ok unittests.test_core.test_structured_array_lt_array ... ok unittests.test_core.test_multiple_operations_with_structured_array ... ok unittests.test_core.test_apply_function_to_constant_array ... ok unittests.test_core.test_apply_function_to_structured_array ... ok unittests.test_core.test_apply_function_to_functional_array ... ok unittests.test_core.test_add_two_constant_arrays ... ok unittests.test_core.test_add_incommensurate_arrays ... ok unittests.test_core.test_getitem_from_constant_array ... ok unittests.test_descriptions.test_get_default_template_engine ... ok unittests.test_descriptions.test_render_with_no_template ... ok unittests.test_descriptions.test_render_with_template ... ok unittests.test_descriptions.test_StringTE_get_template ... ok unittests.test_descriptions.test_StringTE_get_template_from_file ... ok unittests.test_descriptions.test_StringTE_render ... ok unittests.test_descriptions.test_Jinja2TE_get_template_from_file ... ok unittests.test_descriptions.test_Jinja2TE_render ... ok unittests.test_descriptions.test_CheetahTE_get_template_from_file ... ok unittests.test_descriptions.test_CheetahTE_render ... ok unittests.test_files.test__savetxt ... ok unittests.test_files.test_create_BaseFile ... ok unittests.test_files.test_del ... ok unittests.test_files.test_close ... ok unittests.test_files.test_StandardTextFile_write ... ok unittests.test_files.test_StandardTextFile_read ... ok unittests.test_files.test_PickleFile ... ok unittests.test_files.test_NumpyBinaryFile ... ok unittests.test_files.test_HDF5ArrayFile ... ok unittests.test_idmixin.Test_IDMixin.test_celltype_property ... ok unittests.test_idmixin.Test_IDMixin.test_get_initial_value ... ok unittests.test_idmixin.Test_IDMixin.test_get_parameters ... ok unittests.test_idmixin.Test_IDMixin.test_getattr_with_nonparameter_attr ... ok unittests.test_idmixin.Test_IDMixin.test_getattr_with_parameter_attr ... ok unittests.test_idmixin.Test_IDMixin.test_getattr_with_parent_not_set ... ok unittests.test_idmixin.Test_IDMixin.test_inject ... ok unittests.test_idmixin.Test_IDMixin.test_is_standard_cell ... ok unittests.test_idmixin.Test_IDMixin.test_local_property ... ok unittests.test_idmixin.Test_IDMixin.test_position_property ... ok unittests.test_idmixin.Test_IDMixin.test_set_initial_value ... ok unittests.test_idmixin.Test_IDMixin.test_set_parameters ... ok unittests.test_idmixin.Test_IDMixin.test_setattr_with_parameter_attr ... ok unittests.test_lowlevelapi.test_build_create ... ok unittests.test_lowlevelapi.test_build_connect ... ok unittests.test_lowlevelapi.test_set ... ok unittests.test_lowlevelapi.test_build_record ... ok unittests.test_lowlevelapi.test_build_record_with_assembly ... ok unittests.test_population.test_create_population_standard_cell_simple ... ok unittests.test_population.test_create_population_standard_cell_with_params ... ok unittests.test_population.test_create_population_with_implicit_grid ... ok unittests.test_population.test_cell_property ... /<>/build/lib.linux-x86_64-2.7/pyNN/common.py:915: UserWarning: The `Population.cell` attribute is not an official part of the API, and its use is deprecated. It will be removed in a future release. All uses of `cell` may be replaced by `all_cells` release. All uses of `cell` may be replaced by `all_cells`") ok unittests.test_population.test_id_to_index ... ok unittests.test_population.test_id_to_index_with_array ... ok unittests.test_population.test_id_to_index_with_populationview ... ok unittests.test_population.test_id_to_index_with_invalid_id ... ok unittests.test_population.test_id_to_index_with_invalid_ids ... ok unittests.test_population.test_id_to_local_index ... ok unittests.test_population.test_id_to_local_index_with_invalid_id ... ok unittests.test_population.test_set_structure ... ok unittests.test_population.test_get_positions ... ok unittests.test_population.test_set_positions ... ok unittests.test_population.test_position_generator ... ok unittests.test_population.test_describe ... ok unittests.test_populationview.test_create_with_boolean_array_selector ... ok unittests.test_populationview.test_create_with_index_array_selector ... ok unittests.test_populationview.test_create_with_slice_selector ... ok unittests.test_populationview.test_structure_property ... ok unittests.test_populationview.test_get_positions ... ok unittests.test_populationview.test_id_to_index ... ok unittests.test_populationview.test_describe ... ok unittests.test_projection.test_create_simple ... ok unittests.test_projection.test_create_with_synapse_dynamics ... ok unittests.test_projection.test_len ... ok unittests.test_projection.test_size_no_gather ... ok unittests.test_projection.test_size_with_gather ... ok unittests.test_projection.test__getitem ... ok unittests.test_projection.test_set_weights ... ok unittests.test_projection.test_randomize_weights ... ok unittests.test_projection.test_set_delays ... ok unittests.test_projection.test_randomize_delays ... ok unittests.test_projection.test_set_synapse_dynamics_param ... ok unittests.test_projection.test_get_weights ... ok unittests.test_projection.test_get_delays ... ok unittests.test_projection.test_save_connections ... ok unittests.test_projection.test_print_weights_as_list ... ok unittests.test_projection.test_print_weights_as_array ... ok unittests.test_projection.test_weight_histogram_with_args ... ok unittests.test_projection.test_weight_histogram_no_args ... ok unittests.test_projection.test_describe ... ok test_create (unittests.test_random.NativeRNGTests) ... ok test_parallel_safe_with_mask_local (unittests.test_random.ParallelTests) ... ok test_parallel_safe_with_mask_local_False (unittests.test_random.ParallelTests) ... ok test_parallel_safe_with_mask_local_None (unittests.test_random.ParallelTests) ... ok test_parallel_unsafe (unittests.test_random.ParallelTests) ... ok test_permutation (unittests.test_random.ParallelTests) ... ok test_boundaries (unittests.test_random.RandomDistributionTests) ... ERROR test_gamma (unittests.test_random.RandomDistributionTests) ... ok test_gaussian (unittests.test_random.RandomDistributionTests) ... ok test_uniform (unittests.test_random.RandomDistributionTests) ... ok Calling next(0) should return an empty array. ... ok Calling next() with no arguments or with n=1 should return a float. ... ok Calling next(n=m) where m > 1 should return an array. ... ok Calling next(m) where m < 0 should raise a ValueError. ... ok test_invalid_seed (unittests.test_random.SimpleTests) ... ok unittests.test_recording.test_Recorder_create ... ok unittests.test_recording.test_Recorder_invalid_variable ... ok unittests.test_recording.test_record ... ok unittests.test_recording.test_filter_recorded ... ok unittests.test_recording.test_get__zero_offset ... ok unittests.test_recording.test_write__with_filename__compatible_output__gather__onroot ... ok unittests.test_recording.test_metadata_property ... ok unittests.test_recording.test__make_compatible_spikes ... ok unittests.test_recording.test__make_compatible_v ... ok unittests.test_simulation_control.test_setup ... ok unittests.test_simulation_control.test_end ... ok unittests.test_simulation_control.test_run ... ok unittests.test_simulation_control.test_reset ... ok unittests.test_simulation_control.test_initialize ... ok unittests.test_simulation_control.test_current_time ... ok unittests.test_simulation_control.test_time_step ... ok unittests.test_simulation_control.test_min_delay ... ok unittests.test_simulation_control.test_max_delay ... ok unittests.test_simulation_control.test_num_processes ... ok unittests.test_simulation_control.test_rank ... ok unittests.test_space.Grid2D_Test.test_calculate_size ... ok unittests.test_space.Grid2D_Test.test_generate_positions ... ERROR unittests.test_space.Grid3D_Test.test_calculate_size ... ok unittests.test_space.Grid3D_Test.test_generate_positions ... ok test__eq__ (unittests.test_space.LineTest) ... ok test_generate_positions (unittests.test_space.LineTest) ... ok test_generate_positions_default_parameters (unittests.test_space.LineTest) ... ok test_get_parameters (unittests.test_space.LineTest) ... ok test_cylindrical_space (unittests.test_space.SpaceTest) ... ok test_generator_for_infinite_space_with_3D_distances (unittests.test_space.SpaceTest) ... ok test_infinite_space_with_3D_distances (unittests.test_space.SpaceTest) ... ok test_infinite_space_with_collapsed_axes (unittests.test_space.SpaceTest) ... ok test_infinite_space_with_scale_and_offset (unittests.test_space.SpaceTest) ... ok unittests.test_space.TestCuboid.test_sample ... ok unittests.test_space.TestRandomStructure.test_generate_positions ... ok unittests.test_space.TestSphere.test__create ... ok unittests.test_space.TestSphere.test_sample ... ok unittests.test_space.test_distance ... ERROR unittests.test_standardmodels.test_build_translations ... ok unittests.test_standardmodels.test_has_parameter ... ok unittests.test_standardmodels.test_get_parameter_names ... ok Instantiating a StandardModelType should set self.parameters to the value ... ok unittests.test_standardmodels.test_checkParameters_without_defaults ... ok unittests.test_standardmodels.test_checkParameters_with_defaults ... ok unittests.test_standardmodels.test_checkParameters_with_nonexistent_parameter ... ok unittests.test_standardmodels.test_checkParameters_with_invalid_value ... ok unittests.test_standardmodels.test_translate ... ok unittests.test_standardmodels.test_translate_with_invalid_transformation ... ok unittests.test_standardmodels.test_translate_with_divide_by_zero_error ... ok unittests.test_standardmodels.test_reverse_translate ... ok unittests.test_standardmodels.test_reverse_translate_with_invalid_transformation ... ok unittests.test_standardmodels.test_simple_parameters ... ok unittests.test_standardmodels.test_scaled_parameters ... ok unittests.test_standardmodels.test_computed_parameters ... ok update_parameters(P) should update self.parameters with the value of ... ok unittests.test_standardmodels.test_describe ... ok unittests.test_standardmodels.test_describe_SD ... ok unittests.test_standardmodels.test_STDPMechanism_create ... ok unittests.test_standardmodels.test_STDPMechanism_create_invalid_types ... ok unittests.test_utility_functions.test_is_conductance ... ok unittests.test_utility_functions.test_is_conductance_with_nonlocal_cell ... ok unittests.test_utility_functions.test_check_weight_with_scalar ... ok unittests.test_utility_functions.test_check_weight_with_list ... ok unittests.test_utility_functions.test_check_weight_with_NaN ... ok unittests.test_utility_functions.test_check_weight_with_invalid_value ... ok unittests.test_utility_functions.test_check_weight_is_conductance_is_None ... ok unittests.test_utility_functions.test_check_delay ... ok ====================================================================== ERROR: unittests.test_connectors.TestDistanceDependentProbabilityConnector.test_connect_with_default_args ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest self.test(*self.arg) File "/<>/test/unittests/test_connectors.py", line 239, in test_connect_with_default_args C.connect(self.prj) File "/<>/build/lib.linux-x86_64-2.7/pyNN/connectors.py", line 477, in connect connector._probabilistic_connect(src, proba, self.n_connections) File "/<>/build/lib.linux-x86_64-2.7/pyNN/connectors.py", line 322, in _probabilistic_connect rarr = self.probas_generator.get(self.N) File "/<>/build/lib.linux-x86_64-2.7/pyNN/connectors.py", line 135, in get_safe return self.check(self.extract(N, distance_matrix, sub_mask)) File "/<>/build/lib.linux-x86_64-2.7/pyNN/connectors.py", line 113, in extract values = self.source.next(N, mask_local=self.local_mask) File "/<>/build/lib.linux-x86_64-2.7/pyNN/random.py", line 221, in next mask_local=mask_local) File "/<>/build/lib.linux-x86_64-2.7/pyNN/random.py", line 104, in next rarr = rarr[mask_local] IndexError: boolean index did not match indexed array along dimension 0; dimension is 6 but corresponding boolean dimension is 5 -------------------- >> begin captured logging << -------------------- PyNN: DEBUG: Can't check weight, conductance status unknown. PyNN: DEBUG: Can't check weight, conductance status unknown. --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_boundaries (unittests.test_random.RandomDistributionTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/test/unittests/test_random.py", line 177, in test_boundaries vals = rd.next(100) File "/<>/build/lib.linux-x86_64-2.7/pyNN/random.py", line 235, in next res[idx] = self.rng.next(n=n, distribution=self.name, parameters=self.parameters, mask_local=mask_local) ValueError: shape mismatch: value array of shape (100,) could not be broadcast to indexing result of shape (47,) ====================================================================== ERROR: unittests.test_space.Grid2D_Test.test_generate_positions ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest self.test(*self.arg) File "/<>/test/unittests/test_space.py", line 172, in test_generate_positions positions = self.grid1.generate_positions(n) File "/<>/build/lib.linux-x86_64-2.7/pyNN/space.py", line 199, in generate_positions x,y,z = numpy.indices((nx,ny,1), dtype=float) File "/usr/lib/python2.7/dist-packages/numpy/core/numeric.py", line 1966, in indices res = empty((N,)+dimensions, dtype=dtype) TypeError: 'float' object cannot be interpreted as an index ====================================================================== ERROR: unittests.test_space.test_distance ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest self.test(*self.arg) File "/<>/test/unittests/test_space.py", line 38, in test_distance assert_equal(space.distance(cell1, cell2, periodic_boundaries=A(7.0, 1e12, 1e12)), 13.0) File "/<>/build/lib.linux-x86_64-2.7/pyNN/space.py", line 48, in distance if not periodic_boundaries == None: ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ---------------------------------------------------------------------- Ran 294 tests in 0.462s FAILED (SKIP=6, errors=4) make[1]: *** [debian/rules:8: override_dh_auto_test] Error 1 make[1]: Leaving directory '/<>' make: *** [debian/rules:5: build] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20200105-1043 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 3260 Build-Time: 1 Distribution: focal Fail-Stage: build Host Architecture: amd64 Install-Time: 19 Job: pynn_0.7.4-1.1.dsc Machine Architecture: amd64 Package: pynn Package-Time: 22 Source-Version: 0.7.4-1.1 Space: 3260 Status: attempted Version: 0.7.4-1.1 -------------------------------------------------------------------------------- Finished at 20200105-1043 Build needed 00:00:22, 3260k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18342288 Scanning for processes to kill in build PACKAGEBUILD-18342288