https://launchpad.net/ubuntu/+archive/test-rebuild-20200327-focal/+build/18962812 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lgw01-amd64-016 4.4.0-176-generic #206-Ubuntu SMP Fri Feb 28 05:02:04 UTC 2020 x86_64 Buildd toolchain package versions: launchpad-buildd_188 python-lpbuildd_188 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 7 Apr 16:18:07 ntpdate[1909]: adjust time server 10.211.37.1 offset -0.000521 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18962812 --image-type chroot /home/buildd/filecache-default/900826adb60e25cda6fdb4122eeaecf6bf29a953 Creating target for build PACKAGEBUILD-18962812 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18962812 Starting target for build PACKAGEBUILD-18962812 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18962812 'deb http://ftpmaster.internal/ubuntu focal main universe' Overriding sources.list in build-PACKAGEBUILD-18962812 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18962812 Updating target for build PACKAGEBUILD-18962812 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [265 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 Packages [972 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main Translation-en [502 kB] Get:4 http://ftpmaster.internal/ubuntu focal/universe amd64 Packages [8593 kB] Get:5 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5129 kB] Fetched 15.5 MB in 14s (1107 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt libapt-pkg6.0 login passwd pinentry-curses 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3176 kB of archives. After this operation, 2048 B of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main amd64 login amd64 1:4.8.1-1ubuntu4 [221 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 libapt-pkg6.0 amd64 2.0.1ubuntu1 [834 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main amd64 apt amd64 2.0.1ubuntu1 [1289 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main amd64 passwd amd64 1:4.8.1-1ubuntu4 [797 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 pinentry-curses amd64 1.1.0-3build1 [36.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3176 kB in 1s (5497 kB/s) (Reading database ... 12814 files and directories currently installed.) Preparing to unpack .../login_1%3a4.8.1-1ubuntu4_amd64.deb ... Unpacking login (1:4.8.1-1ubuntu4) over (1:4.8.1-1ubuntu3) ... Setting up login (1:4.8.1-1ubuntu4) ... (Reading database ... 12814 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.0.1ubuntu1_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.0.1ubuntu1) over (2.0.1) ... Setting up libapt-pkg6.0:amd64 (2.0.1ubuntu1) ... (Reading database ... 12814 files and directories currently installed.) Preparing to unpack .../apt_2.0.1ubuntu1_amd64.deb ... Unpacking apt (2.0.1ubuntu1) over (2.0.1) ... Setting up apt (2.0.1ubuntu1) ... (Reading database ... 12814 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.8.1-1ubuntu4_amd64.deb ... Unpacking passwd (1:4.8.1-1ubuntu4) over (1:4.8.1-1ubuntu3) ... Setting up passwd (1:4.8.1-1ubuntu4) ... (Reading database ... 12814 files and directories currently installed.) Preparing to unpack .../pinentry-curses_1.1.0-3build1_amd64.deb ... Unpacking pinentry-curses (1.1.0-3build1) over (1.1.0-3) ... Setting up pinentry-curses (1.1.0-3build1) ... Processing triggers for libc-bin (2.31-0ubuntu7) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18962812 amd64 focal -c chroot:build-PACKAGEBUILD-18962812 --arch=amd64 --dist=focal --nolog -A pysal_2.0.0-1.dsc Initiating build PACKAGEBUILD-18962812 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-176-generic #206-Ubuntu SMP Fri Feb 28 05:02:04 UTC 2020 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-016.buildd +==============================================================================+ | pysal 2.0.0-1 (amd64) 07 Apr 2020 16:19 | +==============================================================================+ Package: pysal Version: 2.0.0-1 Source Version: 2.0.0-1 Distribution: focal Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/pysal-HNwIYF/pysal-2.0.0' with '<>' I: NOTICE: Log filtering will replace 'build/pysal-HNwIYF' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18962812/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- pysal_2.0.0-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-_vVFA_/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-_vVFA_/apt_archive ./ InRelease Get:2 copy:/<>/resolver-_vVFA_/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-_vVFA_/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-_vVFA_/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-_vVFA_/apt_archive ./ Packages [528 B] Fetched 2861 B in 0s (179 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-_vVFA_/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12814 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 9), dh-python, python3-all, python3-geojson, python3-geopandas, python3-matplotlib, python3-nose-exclude, python3-numexpr, python3-numpy, python3-pandas, python3-rtree, python3-scipy, python3-seaborn, python3-setuptools, python3-shapely, python3-sklearn, python3-statsmodels Filtered Build-Depends: debhelper (>= 9), dh-python, python3-all, python3-geojson, python3-geopandas, python3-matplotlib, python3-nose-exclude, python3-numexpr, python3-numpy, python3-pandas, python3-rtree, python3-scipy, python3-seaborn, python3-setuptools, python3-shapely, python3-sklearn, python3-statsmodels dpkg-deb: building package 'sbuild-build-depends-pysal-dummy' in '/<>/resolver-dSwr79/apt_archive/sbuild-build-depends-pysal-dummy.deb'. Ign:1 copy:/<>/resolver-dSwr79/apt_archive ./ InRelease Get:2 copy:/<>/resolver-dSwr79/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-dSwr79/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-dSwr79/apt_archive ./ Sources [301 B] Get:5 copy:/<>/resolver-dSwr79/apt_archive ./ Packages [629 B] Fetched 3049 B in 0s (238 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install pysal build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev blt bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config fonts-dejavu-core fonts-lyx gdal-data gettext gettext-base groff-base intltool-debian libaec0 libarchive-zip-perl libarmadillo9 libarpack2 libasn1-8-heimdal libatlas3-base libblas3 libbrotli1 libbsd0 libcfitsio8 libcharls2 libcroco3 libcurl3-gnutls libdap25 libdapclient6v5 libdebhelper-perl libelf1 libepsilon1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfreexl1 libfyba0 libgdal26 libgeos-3.8.0 libgeos-c1v5 libgeotiff5 libgfortran5 libgif7 libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libhdf4-0-alt libhdf5-103 libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libicu66 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjs-underscore libk5crypto3 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libldap-2.4-2 libldap-common libltdl7 libmagic-mgc libmagic1 libminizip1 libmpdec2 libmysqlclient21 libnetcdf15 libnghttp2-14 libnspr4 libnss3 libodbc1 libogdi4.1 libopenjp2-7 libpipeline1 libpoppler97 libpq5 libproj15 libpsl5 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libqhull7 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libspatialindex-c6 libspatialindex-dev libspatialindex6 libspatialite7 libssh-4 libsub-override-perl libsuperlu5 libsz2 libtcl8.6 libtiff5 libtk8.6 libtool libuchardet0 liburiparser1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxerces-c3.2 libxext6 libxft2 libxml2 libxrender1 libxss1 m4 man-db mime-support mysql-common odbcinst odbcinst1debian2 po-debconf proj-data python-matplotlib-data python3 python3-all python3-attr python3-click python3-click-plugins python3-cligj python3-colorama python3-cycler python3-dateutil python3-decorator python3-distutils python3-fiona python3-geojson python3-geopandas python3-joblib python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-munch python3-nose python3-nose-exclude python3-numexpr python3-numpy python3-pandas python3-pandas-lib python3-patsy python3-pkg-resources python3-pyparsing python3-pyproj python3-rtree python3-scipy python3-seaborn python3-setuptools python3-shapely python3-six python3-sklearn python3-sklearn-lib python3-statsmodels python3-statsmodels-lib python3-tk python3-tz python3.8 python3.8-minimal tk8.6-blt2.5 ttf-bitstream-vera ucf x11-common Suggested packages: autoconf-archive gnu-standards autoconf-doc blt-demo wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff geotiff-bin gdal-bin libgeotiff-epsg krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs liblcms2-utils libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin proj-bin tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-venv python-attr-doc python-cycler-doc fiona-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft python-nose-doc gfortran python-numpy-doc python3-dev python3-pytest python3-numpy-dbg python-pandas-doc python-patsy-doc python-pyparsing-doc python-scipy-doc python-setuptools-doc python3-dap python-sklearn-doc python-statsmodels-doc tix python3-tk-dbg python3.8-venv python3.8-doc binfmt-support Recommended packages: curl | wget | lynx libarchive-cpio-perl proj-bin libglib2.0-data shared-mime-info xdg-user-dirs javascript-common krb5-locales poppler-data publicsuffix libsasl2-modules pkg-config libltdl-dev libmail-sendmail-perl python3-descartes python3-geopy python3-psycopg2 python3-pysal python3-pytest python3-simplejson python3-psutil python3-pil python3-tables python3-xlrd python3-openpyxl python3-xlwt python3-bs4 python3-html5lib python3-lxml python3-cvxopt The following NEW packages will be installed: autoconf automake autopoint autotools-dev blt bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config fonts-dejavu-core fonts-lyx gdal-data gettext gettext-base groff-base intltool-debian libaec0 libarchive-zip-perl libarmadillo9 libarpack2 libasn1-8-heimdal libatlas3-base libblas3 libbrotli1 libbsd0 libcfitsio8 libcharls2 libcroco3 libcurl3-gnutls libdap25 libdapclient6v5 libdebhelper-perl libelf1 libepsilon1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfreexl1 libfyba0 libgdal26 libgeos-3.8.0 libgeos-c1v5 libgeotiff5 libgfortran5 libgif7 libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libhdf4-0-alt libhdf5-103 libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libicu66 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjs-underscore libk5crypto3 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libldap-2.4-2 libldap-common libltdl7 libmagic-mgc libmagic1 libminizip1 libmpdec2 libmysqlclient21 libnetcdf15 libnghttp2-14 libnspr4 libnss3 libodbc1 libogdi4.1 libopenjp2-7 libpipeline1 libpoppler97 libpq5 libproj15 libpsl5 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libqhull7 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libspatialindex-c6 libspatialindex-dev libspatialindex6 libspatialite7 libssh-4 libsub-override-perl libsuperlu5 libsz2 libtcl8.6 libtiff5 libtk8.6 libtool libuchardet0 liburiparser1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxerces-c3.2 libxext6 libxft2 libxml2 libxrender1 libxss1 m4 man-db mime-support mysql-common odbcinst odbcinst1debian2 po-debconf proj-data python-matplotlib-data python3 python3-all python3-attr python3-click python3-click-plugins python3-cligj python3-colorama python3-cycler python3-dateutil python3-decorator python3-distutils python3-fiona python3-geojson python3-geopandas python3-joblib python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-munch python3-nose python3-nose-exclude python3-numexpr python3-numpy python3-pandas python3-pandas-lib python3-patsy python3-pkg-resources python3-pyparsing python3-pyproj python3-rtree python3-scipy python3-seaborn python3-setuptools python3-shapely python3-six python3-sklearn python3-sklearn-lib python3-statsmodels python3-statsmodels-lib python3-tk python3-tz python3.8 python3.8-minimal sbuild-build-depends-pysal-dummy tk8.6-blt2.5 ttf-bitstream-vera ucf x11-common 0 upgraded, 191 newly installed, 0 to remove and 0 not upgraded. Need to get 107 MB of archives. After this operation, 435 MB of additional disk space will be used. Get:1 copy:/<>/resolver-dSwr79/apt_archive ./ sbuild-build-depends-pysal-dummy 0.invalid.0 [952 B] Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 libpython3.8-minimal amd64 3.8.2-1ubuntu1 [705 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main amd64 libexpat1 amd64 2.2.9-1build1 [73.3 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main amd64 python3.8-minimal amd64 3.8.2-1ubuntu1 [1897 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 python3-minimal amd64 3.8.2-0ubuntu2 [23.6 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main amd64 mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main amd64 libmpdec2 amd64 2.4.2-3 [81.1 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main amd64 libpython3.8-stdlib amd64 3.8.2-1ubuntu1 [1668 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main amd64 python3.8 amd64 3.8.2-1ubuntu1 [364 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main amd64 libpython3-stdlib amd64 3.8.2-0ubuntu2 [7068 B] Get:11 http://ftpmaster.internal/ubuntu focal/main amd64 python3 amd64 3.8.2-0ubuntu2 [47.6 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main amd64 libbsd0 amd64 0.10.0-1 [45.4 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main amd64 bsdmainutils amd64 11.1.2ubuntu3 [181 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main amd64 libuchardet0 amd64 0.0.6-3build1 [65.2 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main amd64 groff-base amd64 1.22.4-4build1 [847 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main amd64 libpipeline1 amd64 1.5.2-2build1 [27.7 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main amd64 man-db amd64 2.9.1-1 [1112 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main amd64 libmagic-mgc amd64 1:5.38-4 [218 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main amd64 libmagic1 amd64 1:5.38-4 [75.9 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main amd64 file amd64 1:5.38-4 [23.3 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main amd64 libelf1 amd64 0.176-1.1build1 [44.0 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main amd64 libglib2.0-0 amd64 2.64.1-1 [1284 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main amd64 libicu66 amd64 66.1-2ubuntu2 [8520 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main amd64 libxml2 amd64 2.9.10+dfsg-4build1 [640 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main amd64 python3-pkg-resources all 45.2.0-1 [130 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main amd64 python3-six all 1.14.0-2 [12.1 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main amd64 ucf all 3.0038+nmu1 [51.6 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main amd64 gettext-base amd64 0.19.8.1-10build1 [50.2 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main amd64 libkrb5support0 amd64 1.17-6ubuntu4 [30.9 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main amd64 libk5crypto3 amd64 1.17-6ubuntu4 [80.2 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main amd64 libkeyutils1 amd64 1.6-6ubuntu1 [10.2 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main amd64 libkrb5-3 amd64 1.17-6ubuntu4 [330 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main amd64 libgssapi-krb5-2 amd64 1.17-6ubuntu4 [121 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main amd64 libpsl5 amd64 0.21.0-1ubuntu1 [51.5 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main amd64 libxau6 amd64 1:1.0.9-0ubuntu1 [7488 B] Get:36 http://ftpmaster.internal/ubuntu focal/main amd64 libxdmcp6 amd64 1:1.1.3-0ubuntu1 [10.6 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb1 amd64 1.14-2 [44.7 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main amd64 libx11-data all 2:1.6.9-2ubuntu1 [113 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main amd64 libx11-6 amd64 2:1.6.9-2ubuntu1 [573 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main amd64 libxext6 amd64 2:1.3.4-0ubuntu1 [29.1 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main amd64 m4 amd64 1.4.18-4 [199 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main amd64 autoconf all 2.69-11.1 [321 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main amd64 automake all 1:1.16.1-4ubuntu6 [522 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main amd64 autopoint all 0.19.8.1-10build1 [412 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main amd64 libtcl8.6 amd64 8.6.10+dfsg-1 [902 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main amd64 libfreetype6 amd64 2.10.1-2 [341 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main amd64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:50 http://ftpmaster.internal/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main amd64 fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main amd64 libfontconfig1 amd64 2.13.1-2ubuntu2 [114 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main amd64 libxrender1 amd64 1:0.9.10-1 [18.7 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main amd64 libxft2 amd64 2.3.3-0ubuntu1 [39.2 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main amd64 x11-common all 1:7.7+19ubuntu14 [22.3 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main amd64 libxss1 amd64 1:1.2.3-1 [8140 B] Get:57 http://ftpmaster.internal/ubuntu focal/main amd64 libtk8.6 amd64 8.6.10-1 [714 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] Get:60 http://ftpmaster.internal/ubuntu focal/main amd64 libtool all 2.4.6-14 [161 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main amd64 dh-autoreconf all 19 [16.1 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main amd64 libdebhelper-perl all 12.9ubuntu1 [62.0 kB] Get:63 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amd64 2.4+20151223.gitfa8646d.1-2build1 [54.9 kB] Get:102 http://ftpmaster.internal/ubuntu focal/main amd64 libssh-4 amd64 0.9.3-2ubuntu1 [170 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main amd64 libcurl3-gnutls amd64 7.68.0-1ubuntu1 [230 kB] Get:104 http://ftpmaster.internal/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] Get:105 http://ftpmaster.internal/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] Get:106 http://ftpmaster.internal/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] Get:107 http://ftpmaster.internal/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] Get:108 http://ftpmaster.internal/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] Get:109 http://ftpmaster.internal/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] Get:110 http://ftpmaster.internal/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] Get:111 http://ftpmaster.internal/ubuntu 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amd64 libgif7 amd64 5.1.9-1 [32.2 kB] Get:122 http://ftpmaster.internal/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1build1 [268 kB] Get:123 http://ftpmaster.internal/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] Get:124 http://ftpmaster.internal/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11 [1311 kB] Get:125 http://ftpmaster.internal/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] Get:126 http://ftpmaster.internal/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] Get:127 http://ftpmaster.internal/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] Get:128 http://ftpmaster.internal/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] Get:129 http://ftpmaster.internal/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] Get:130 http://ftpmaster.internal/ubuntu focal/main amd64 mysql-common all 5.8+1.0.5ubuntu2 [7496 B] Get:131 http://ftpmaster.internal/ubuntu 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python3-sklearn all 0.20.3+dfsg-0ubuntu3 [1561 kB] Get:190 http://ftpmaster.internal/ubuntu focal/universe amd64 python3-statsmodels-lib amd64 0.11.1-1 [1574 kB] Get:191 http://ftpmaster.internal/ubuntu focal/universe amd64 python3-statsmodels all 0.11.1-1 [3939 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 107 MB in 11s (10.2 MB/s) Selecting previously unselected package libpython3.8-minimal:amd64. 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Setting up libhcrypto4-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up python3-tz (2019.3-1) ... Setting up python3-six (1.14.0-2) ... Setting up python3-decorator (4.4.2-0ubuntu1) ... Setting up libwind0-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up python3-pyparsing (2.4.6-1) ... Setting up libhdf5-103:amd64 (1.10.4+repack-11) ... Setting up python3-cycler (0.10.0-3) ... Setting up bsdmainutils (11.1.2ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-6ubuntu4) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libodbc1:amd64 (2.3.6-0.1build1) ... Setting up libssh-4:amd64 (0.9.3-2ubuntu1) ... Setting up autoconf (2.69-11.1) ... Setting up libhdf4-0-alt (4.2.14-1build1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... 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Setting up python3-joblib (0.14.0-3) ... Setting up python3-colorama (0.4.3-1build1) ... Setting up libhx509-5-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libxext6:amd64 (2:1.3.4-0ubuntu1) ... Setting up python3-all (3.8.2-0ubuntu2) ... Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... Setting up python3-click (7.0-3) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3-nose (1.3.7-5) ... Setting up python3-munch (2.3.2-2) ... Setting up libgeotiff5:amd64 (1.5.1-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-kiwisolver (1.0.1-3build1) ... Setting up python3-click-plugins (1.1.1-2) ... Setting up python3-numpy (1:1.17.4-5ubuntu3) ... Setting up python3-nose-exclude (0.5.0-2) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up python3-statsmodels-lib:amd64 (0.11.1-1) ... Setting up libkrb5-26-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up python3-shapely (1.7.0-1build1) ... Setting up python3-matplotlib (3.1.2-1ubuntu3) ... Setting up libxft2:amd64 (2.3.3-0ubuntu1) ... Setting up python3-scipy (1.3.3-3build1) ... Setting up python3-cligj (0.5.0-2) ... Setting up po-debconf (1.0.21) ... Setting up libtk8.6:amd64 (8.6.10-1) ... Setting up python3-pandas-lib (0.25.3+dfsg-7) ... Setting up python3-sklearn-lib (0.20.3+dfsg-0ubuntu3) ... Setting up python3-pyproj (2.5.0+ds-1) ... Setting up libheimntlm0-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up python3-patsy (0.5.1-1) ... Setting up python3-pandas (0.25.3+dfsg-7) ... /usr/lib/python3/dist-packages/pandas/tests/frame/test_alter_axes.py:241: SyntaxWarning: "is" with a literal. Did you mean "=="? False if (keys[0] is "A" and keys[1] is "A") else drop # noqa: F632 /usr/lib/python3/dist-packages/pandas/tests/frame/test_alter_axes.py:241: SyntaxWarning: "is" with a literal. Did you mean "=="? False if (keys[0] is "A" and keys[1] is "A") else drop # noqa: F632 Setting up libgssapi3-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up python3-sklearn (0.20.3+dfsg-0ubuntu3) ... /usr/lib/python3/dist-packages/sklearn/datasets/lfw.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? if img.ndim is 0: /usr/lib/python3/dist-packages/sklearn/model_selection/tests/test_search.py:887: SyntaxWarning: "is not" with a literal. Did you mean "!="? if k is not 'rank_test_score') /usr/lib/python3/dist-packages/sklearn/model_selection/tests/test_search.py:890: SyntaxWarning: "is not" with a literal. Did you mean "!="? k is not 'rank_test_score') Setting up python3-numexpr (2.7.1-1build1) ... Setting up python3-statsmodels (0.11.1-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4) ... Setting up blt (2.5.3+dfsg-4) ... Setting up libldap-2.4-2:amd64 (2.4.49+dfsg-2ubuntu1) ... Setting up python3-tk:amd64 (3.8.2-1ubuntu1) ... Setting up libcurl3-gnutls:amd64 (7.68.0-1ubuntu1) ... Setting up libnetcdf15:amd64 (1:4.7.3-1) ... Setting up libcfitsio8:amd64 (3.470-3) ... Setting up libdapclient6v5:amd64 (3.20.5-1) ... Setting up libxerces-c3.2:amd64 (3.2.2+debian-1build3) ... Setting up libpq5:amd64 (12.2-4) ... Setting up python3-seaborn (0.10.0-1) ... Setting up odbcinst (2.3.6-0.1build1) ... Setting up dh-autoreconf (19) ... Setting up odbcinst1debian2:amd64 (2.3.6-0.1build1) ... Setting up libgdal26 (3.0.4+dfsg-1build3) ... Setting up debhelper (12.9ubuntu1) ... Setting up python3-fiona (1.8.13-1build3) ... Setting up python3-geopandas (0.7.0-1) ... Setting up sbuild-build-depends-pysal-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-0ubuntu7) ... 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python3-scipy_1.3.3-3build1 python3-seaborn_0.10.0-1 python3-setuptools_45.2.0-1 python3-shapely_1.7.0-1build1 python3-six_1.14.0-2 python3-sklearn_0.20.3+dfsg-0ubuntu3 python3-sklearn-lib_0.20.3+dfsg-0ubuntu3 python3-statsmodels_0.11.1-1 python3-statsmodels-lib_0.11.1-1 python3-tk_3.8.2-1ubuntu1 python3-tz_2019.3-1 python3.8_3.8.2-1ubuntu1 python3.8-minimal_3.8.2-1ubuntu1 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pysal-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_245.2-1ubuntu2 systemd-sysv_245.2-1ubuntu2 sysvinit-utils_2.96-2.1ubuntu1 tar_1.30+dfsg-7 tk8.6-blt2.5_2.5.3+dfsg-4 ttf-bitstream-vera_1.10-8 tzdata_2019c-3ubuntu1 ubuntu-keyring_2020.02.11.1 ucf_3.0038+nmu1 util-linux_2.34-0.1ubuntu8 x11-common_1:7.7+19ubuntu14 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Jul 8 06:47:14 2019 UTC gpgv: using RSA key 8182DE417056408D614650D16750F10AE88D4AF1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pysal_2.0.0-1.dsc dpkg-source: info: extracting pysal in pysal-2.0.0 dpkg-source: info: unpacking pysal_2.0.0.orig.tar.gz dpkg-source: info: unpacking pysal_2.0.0-1.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18962812 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18962812 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18962812 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package pysal dpkg-buildpackage: info: source version 2.0.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python3 --buildsystem pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:217: python3.8 setup.py clean ['pysal', 'pysal.explore', 'pysal.lib', 'pysal.model', 'pysal.viz', 'pysal.explore.esda', 'pysal.explore.pointpats', 'pysal.explore.spaghetti', 'pysal.explore.giddy', 'pysal.explore.inequality', 'pysal.explore.esda.tests', 'pysal.explore.pointpats.tests', 'pysal.explore.spaghetti.tests', 'pysal.explore.giddy.tests', 'pysal.explore.inequality.tests', 'pysal.lib.examples', 'pysal.lib.io', 'pysal.lib.weights', 'pysal.lib.cg', 'pysal.lib.examples.examples', 'pysal.lib.examples.tests', 'pysal.lib.io.geotable', 'pysal.lib.io.util', 'pysal.lib.io.iohandlers', 'pysal.lib.io.tests', 'pysal.lib.io.geotable.tests', 'pysal.lib.io.util.tests', 'pysal.lib.io.iohandlers.tests', 'pysal.lib.weights.tests', 'pysal.lib.cg.ops', 'pysal.lib.cg.tests', 'pysal.lib.cg.ops.tests', 'pysal.model.spreg', 'pysal.model.spvcm', 'pysal.model.mgwr', 'pysal.model.spint', 'pysal.model.spglm', 'pysal.model.spreg.tests', 'pysal.model.spvcm.both_levels', 'pysal.model.spvcm.examples', 'pysal.model.spvcm.custom_plots', 'pysal.model.spvcm.tests', 'pysal.model.spvcm.lower_level', 'pysal.model.spvcm.upper_level', 'pysal.model.spvcm.both_levels.se_sma', 'pysal.model.spvcm.both_levels.generic', 'pysal.model.spvcm.both_levels.sma_sma', 'pysal.model.spvcm.both_levels.se_se', 'pysal.model.spvcm.both_levels.none', 'pysal.model.spvcm.both_levels.tests', 'pysal.model.spvcm.both_levels.sma_se', 'pysal.model.spvcm.both_levels.tests.data', 'pysal.model.spvcm.tests.data', 'pysal.model.spvcm.lower_level.sma', 'pysal.model.spvcm.lower_level.se', 'pysal.model.spvcm.lower_level.tests', 'pysal.model.spvcm.upper_level.sma', 'pysal.model.spvcm.upper_level.se', 'pysal.model.spvcm.upper_level.tests', 'pysal.model.spvcm.upper_level.tests.data', 'pysal.model.mgwr.tests', 'pysal.model.spint.tests', 'pysal.model.spglm.tests', 'pysal.viz.splot', 'pysal.viz.mapclassify', 'pysal.viz.mapclassify.datasets', 'pysal.viz.mapclassify.tests', 'pysal.viz.mapclassify.datasets.calemp'] running clean removing '/<>/.pybuild/cpython3_3.8_pysal/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.8' does not exist -- can't clean it dh_clean -O--buildsystem=pybuild debian/rules build dh build --with python3 --buildsystem pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:217: python3.8 setup.py config ['pysal', 'pysal.explore', 'pysal.lib', 'pysal.model', 'pysal.viz', 'pysal.explore.esda', 'pysal.explore.pointpats', 'pysal.explore.spaghetti', 'pysal.explore.giddy', 'pysal.explore.inequality', 'pysal.explore.esda.tests', 'pysal.explore.pointpats.tests', 'pysal.explore.spaghetti.tests', 'pysal.explore.giddy.tests', 'pysal.explore.inequality.tests', 'pysal.lib.examples', 'pysal.lib.io', 'pysal.lib.weights', 'pysal.lib.cg', 'pysal.lib.examples.examples', 'pysal.lib.examples.tests', 'pysal.lib.io.geotable', 'pysal.lib.io.util', 'pysal.lib.io.iohandlers', 'pysal.lib.io.tests', 'pysal.lib.io.geotable.tests', 'pysal.lib.io.util.tests', 'pysal.lib.io.iohandlers.tests', 'pysal.lib.weights.tests', 'pysal.lib.cg.ops', 'pysal.lib.cg.tests', 'pysal.lib.cg.ops.tests', 'pysal.model.spreg', 'pysal.model.spvcm', 'pysal.model.mgwr', 'pysal.model.spint', 'pysal.model.spglm', 'pysal.model.spreg.tests', 'pysal.model.spvcm.both_levels', 'pysal.model.spvcm.examples', 'pysal.model.spvcm.custom_plots', 'pysal.model.spvcm.tests', 'pysal.model.spvcm.lower_level', 'pysal.model.spvcm.upper_level', 'pysal.model.spvcm.both_levels.se_sma', 'pysal.model.spvcm.both_levels.generic', 'pysal.model.spvcm.both_levels.sma_sma', 'pysal.model.spvcm.both_levels.se_se', 'pysal.model.spvcm.both_levels.none', 'pysal.model.spvcm.both_levels.tests', 'pysal.model.spvcm.both_levels.sma_se', 'pysal.model.spvcm.both_levels.tests.data', 'pysal.model.spvcm.tests.data', 'pysal.model.spvcm.lower_level.sma', 'pysal.model.spvcm.lower_level.se', 'pysal.model.spvcm.lower_level.tests', 'pysal.model.spvcm.upper_level.sma', 'pysal.model.spvcm.upper_level.se', 'pysal.model.spvcm.upper_level.tests', 'pysal.model.spvcm.upper_level.tests.data', 'pysal.model.mgwr.tests', 'pysal.model.spint.tests', 'pysal.model.spglm.tests', 'pysal.viz.splot', 'pysal.viz.mapclassify', 'pysal.viz.mapclassify.datasets', 'pysal.viz.mapclassify.tests', 'pysal.viz.mapclassify.datasets.calemp'] running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:217: /usr/bin/python3 setup.py build ['pysal', 'pysal.explore', 'pysal.lib', 'pysal.model', 'pysal.viz', 'pysal.explore.esda', 'pysal.explore.pointpats', 'pysal.explore.spaghetti', 'pysal.explore.giddy', 'pysal.explore.inequality', 'pysal.explore.esda.tests', 'pysal.explore.pointpats.tests', 'pysal.explore.spaghetti.tests', 'pysal.explore.giddy.tests', 'pysal.explore.inequality.tests', 'pysal.lib.examples', 'pysal.lib.io', 'pysal.lib.weights', 'pysal.lib.cg', 'pysal.lib.examples.examples', 'pysal.lib.examples.tests', 'pysal.lib.io.geotable', 'pysal.lib.io.util', 'pysal.lib.io.iohandlers', 'pysal.lib.io.tests', 'pysal.lib.io.geotable.tests', 'pysal.lib.io.util.tests', 'pysal.lib.io.iohandlers.tests', 'pysal.lib.weights.tests', 'pysal.lib.cg.ops', 'pysal.lib.cg.tests', 'pysal.lib.cg.ops.tests', 'pysal.model.spreg', 'pysal.model.spvcm', 'pysal.model.mgwr', 'pysal.model.spint', 'pysal.model.spglm', 'pysal.model.spreg.tests', 'pysal.model.spvcm.both_levels', 'pysal.model.spvcm.examples', 'pysal.model.spvcm.custom_plots', 'pysal.model.spvcm.tests', 'pysal.model.spvcm.lower_level', 'pysal.model.spvcm.upper_level', 'pysal.model.spvcm.both_levels.se_sma', 'pysal.model.spvcm.both_levels.generic', 'pysal.model.spvcm.both_levels.sma_sma', 'pysal.model.spvcm.both_levels.se_se', 'pysal.model.spvcm.both_levels.none', 'pysal.model.spvcm.both_levels.tests', 'pysal.model.spvcm.both_levels.sma_se', 'pysal.model.spvcm.both_levels.tests.data', 'pysal.model.spvcm.tests.data', 'pysal.model.spvcm.lower_level.sma', 'pysal.model.spvcm.lower_level.se', 'pysal.model.spvcm.lower_level.tests', 'pysal.model.spvcm.upper_level.sma', 'pysal.model.spvcm.upper_level.se', 'pysal.model.spvcm.upper_level.tests', 'pysal.model.spvcm.upper_level.tests.data', 'pysal.model.mgwr.tests', 'pysal.model.spint.tests', 'pysal.model.spglm.tests', 'pysal.viz.splot', 'pysal.viz.mapclassify', 'pysal.viz.mapclassify.datasets', 'pysal.viz.mapclassify.tests', 'pysal.viz.mapclassify.datasets.calemp'] running build running build_py creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal copying pysal/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore copying pysal/explore/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib copying pysal/lib/test_NameSpace.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib copying pysal/lib/common.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib copying pysal/lib/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model copying pysal/model/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz copying pysal/viz/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/tabular.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/geary.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/moran.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/gamma.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/smoothing.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/getisord.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/mixture_smoothing.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda copying pysal/explore/esda/join_counts.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats copying pysal/explore/pointpats/centrography.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats copying pysal/explore/pointpats/window.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats copying pysal/explore/pointpats/distance_statistics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats copying pysal/explore/pointpats/util.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats copying pysal/explore/pointpats/process.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats copying pysal/explore/pointpats/pointpattern.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats copying pysal/explore/pointpats/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats copying pysal/explore/pointpats/quadrat_statistics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti copying pysal/explore/spaghetti/util.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti copying pysal/explore/spaghetti/analysis.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti copying pysal/explore/spaghetti/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti copying pysal/explore/spaghetti/network.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy copying pysal/explore/giddy/ergodic.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy copying pysal/explore/giddy/mobility.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy copying pysal/explore/giddy/util.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy copying pysal/explore/giddy/markov.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy copying pysal/explore/giddy/components.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy copying pysal/explore/giddy/rank.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy copying pysal/explore/giddy/directional.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy copying pysal/explore/giddy/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality copying pysal/explore/inequality/gini.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality copying pysal/explore/inequality/theil.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality copying pysal/explore/inequality/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality copying pysal/explore/inequality/_indices.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests copying pysal/explore/esda/tests/test_moran.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests copying pysal/explore/esda/tests/test_mixture_smoothing.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests copying pysal/explore/esda/tests/test_geary.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests copying pysal/explore/esda/tests/test_join_counts.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests copying pysal/explore/esda/tests/test_getisord.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests copying pysal/explore/esda/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests copying pysal/explore/esda/tests/test_smoothing.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests copying pysal/explore/esda/tests/test_gamma.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats/tests copying pysal/explore/pointpats/tests/test_pointpattern.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats/tests copying pysal/explore/pointpats/tests/test_centrography.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats/tests copying pysal/explore/pointpats/tests/test_distance_statistics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats/tests copying pysal/explore/pointpats/tests/test_quadrat_statistics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats/tests copying pysal/explore/pointpats/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/pointpats/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests copying pysal/explore/spaghetti/tests/test_network_from_gdf.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests copying pysal/explore/spaghetti/tests/test_network_from_shp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests copying pysal/explore/spaghetti/tests/test_network_api_from_shp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests copying pysal/explore/spaghetti/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests copying pysal/explore/spaghetti/tests/test_network_api_from_gdf.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy/tests copying pysal/explore/giddy/tests/test_mobility.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy/tests copying pysal/explore/giddy/tests/test_directional.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy/tests copying pysal/explore/giddy/tests/test_markov.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy/tests copying pysal/explore/giddy/tests/test_rank.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy/tests copying pysal/explore/giddy/tests/test_ergodic.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy/tests copying pysal/explore/giddy/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy/tests copying pysal/explore/giddy/tests/test_util.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/giddy/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality/tests copying pysal/explore/inequality/tests/test_gini.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality/tests copying pysal/explore/inequality/tests/test_theil.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality/tests copying pysal/explore/inequality/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/inequality/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples copying pysal/lib/examples/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io copying pysal/lib/io/fileio.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io copying pysal/lib/io/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io copying pysal/lib/io/tables.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/distance.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/adjtools.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/spatial_lag.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/set_operations.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/util.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/spintW.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/contiguity.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/user.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/weights.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights copying pysal/lib/weights/_contW_lists.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/shapely_ext.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/polygonQuadTreeStructure.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/alpha_shapes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/rtree.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/segmentLocator.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/shapes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/voronoi.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/standalone.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/kdtree.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/locators.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg copying pysal/lib/cg/sphere.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/examples copying pysal/lib/examples/examples/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/examples creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tests copying pysal/lib/examples/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable copying pysal/lib/io/geotable/file.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable copying pysal/lib/io/geotable/utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable copying pysal/lib/io/geotable/wrappers.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable copying pysal/lib/io/geotable/shp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable copying pysal/lib/io/geotable/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable copying pysal/lib/io/geotable/dbf.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util copying pysal/lib/io/util/shapefile.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util copying pysal/lib/io/util/wkb.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util copying pysal/lib/io/util/weight_converter.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util copying pysal/lib/io/util/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util copying pysal/lib/io/util/wkt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/wk1.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/dat.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/arcgis_dbf.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/arcgis_swm.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/db.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/mtx.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/geoda_txt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/arcgis_txt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/template.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/gwt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/csvWrapper.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/mat.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/gal.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/pyDbfIO.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/geobugs_txt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/wkt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/pyShpIO.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers copying pysal/lib/io/iohandlers/stata_txt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/tests copying pysal/lib/io/tests/test_FileIO.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/tests copying pysal/lib/io/tests/test_Tables.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/tests copying pysal/lib/io/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable/tests copying pysal/lib/io/geotable/tests/test_utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable/tests copying pysal/lib/io/geotable/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/geotable/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util/tests copying pysal/lib/io/util/tests/test_wkt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util/tests copying pysal/lib/io/util/tests/test_weight_converter.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util/tests copying pysal/lib/io/util/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util/tests copying pysal/lib/io/util/tests/test_shapefile.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/util/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_geobugs_txt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_db.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_wk1.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_gal.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_wkt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_pyDbfIO.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_stata_txt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_gwt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_arcgis_swm.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_geoda_txt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_pyShpIO.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_dat.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_mtx.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_mat.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_arcgis_dbf.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_arcgis_txt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests copying pysal/lib/io/iohandlers/tests/test_csvWrapper.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_distance.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test__contW_lists.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_spatial_lag.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_nx.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_weights.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_Wsets.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_adjlist.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_user.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_spintW.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_weights_IO.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_util.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests copying pysal/lib/weights/tests/test_contiguity.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops copying pysal/lib/cg/ops/tabular.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops copying pysal/lib/cg/ops/atomic.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops copying pysal/lib/cg/ops/_shapely.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops copying pysal/lib/cg/ops/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops copying pysal/lib/cg/ops/_accessors.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_geoJSON.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_standalone.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_locators.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_voronoi.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_rtree.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_segmentLocator.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_sphere.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_ashapes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_shapes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests copying pysal/lib/cg/tests/test_polygonQuadTreeStructure.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops/tests copying pysal/lib/cg/ops/tests/test_tabular.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops/tests copying pysal/lib/cg/ops/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops/tests copying pysal/lib/cg/ops/tests/test_accessors.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops/tests copying pysal/lib/cg/ops/tests/test_shapely.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/ops/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/diagnostics_tsls.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/sur.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/probit.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/error_sp_hom_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/twosls.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/ols.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/diagnostics_sp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/robust.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/sur_lag.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/error_sp_het_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/twosls_sp_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/error_sp_hom.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/error_sp_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/w_utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/diagnostics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/ml_lag.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/ml_lag_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/ols_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/twosls_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/opt.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/sur_utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/ml_error_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/summary_output.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/twosls_sp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/sputils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/sur_error.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/error_sp_het.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/user_output.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/ml_error.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/error_sp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg copying pysal/model/spreg/diagnostics_sur.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/abstracts.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/priors.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/_constants.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/diagnostics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/sqlite.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/plotting.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/api.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/verify.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/ops.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm copying pysal/model/spvcm/steps.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr copying pysal/model/mgwr/kernels.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr copying pysal/model/mgwr/utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr copying pysal/model/mgwr/gwr.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr copying pysal/model/mgwr/diagnostics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr copying pysal/model/mgwr/sel_bw.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr copying pysal/model/mgwr/search.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr copying pysal/model/mgwr/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr copying pysal/model/mgwr/summary.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint copying pysal/model/spint/dispersion.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint copying pysal/model/spint/vec_SA.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint copying pysal/model/spint/utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint copying pysal/model/spint/gravity.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint copying pysal/model/spint/count_model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint copying pysal/model/spint/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm copying pysal/model/spglm/iwls.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm copying pysal/model/spglm/family.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm copying pysal/model/spglm/glm.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm copying pysal/model/spglm/utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm copying pysal/model/spglm/varfuncs.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm copying pysal/model/spglm/links.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm copying pysal/model/spglm/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm copying pysal/model/spglm/base.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_ols.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_ols_sparse.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_diagnostics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_sur_lag.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp_het_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_probit.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_ols_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_twosls_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_ml_error_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_sur_error.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_sur.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_ml_lag.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_twosls_sp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_twosls_sp_sparse.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_diagnostics_sp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_diagnostics_tsls.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_twosls.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_twosls_sp_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp_hom_sparse.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_twosls_sparse.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/skip.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_sputils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp_hom_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp_het_sparse.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_ml_lag_regimes.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_ml_error.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp_sparse.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp_het.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests copying pysal/model/spreg/tests/test_error_sp_hom.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels copying pysal/model/spvcm/both_levels/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/examples copying pysal/model/spvcm/examples/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/examples creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/custom_plots copying pysal/model/spvcm/custom_plots/svcp.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/custom_plots copying pysal/model/spvcm/custom_plots/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/custom_plots creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests copying pysal/model/spvcm/tests/test_diagnostics.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests copying pysal/model/spvcm/tests/utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests copying pysal/model/spvcm/tests/test_trace.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests copying pysal/model/spvcm/tests/make_data.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests copying pysal/model/spvcm/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level copying pysal/model/spvcm/lower_level/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level copying pysal/model/spvcm/upper_level/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/se_sma copying pysal/model/spvcm/both_levels/se_sma/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/se_sma copying pysal/model/spvcm/both_levels/se_sma/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/se_sma creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/generic copying pysal/model/spvcm/both_levels/generic/sample.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/generic copying pysal/model/spvcm/both_levels/generic/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/generic copying pysal/model/spvcm/both_levels/generic/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/generic creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/sma_sma copying pysal/model/spvcm/both_levels/sma_sma/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/sma_sma copying pysal/model/spvcm/both_levels/sma_sma/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/sma_sma creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/se_se copying pysal/model/spvcm/both_levels/se_se/sample.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/se_se copying pysal/model/spvcm/both_levels/se_se/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/se_se copying pysal/model/spvcm/both_levels/se_se/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/se_se creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/none copying pysal/model/spvcm/both_levels/none/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/none copying pysal/model/spvcm/both_levels/none/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/none creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests copying pysal/model/spvcm/both_levels/tests/test_sese.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests copying pysal/model/spvcm/both_levels/tests/test_generic.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests copying pysal/model/spvcm/both_levels/tests/make_data.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests copying pysal/model/spvcm/both_levels/tests/test_smase.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests copying pysal/model/spvcm/both_levels/tests/test_smasma.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests copying pysal/model/spvcm/both_levels/tests/test_mvcm.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests copying pysal/model/spvcm/both_levels/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests copying pysal/model/spvcm/both_levels/tests/test_sesma.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/sma_se copying pysal/model/spvcm/both_levels/sma_se/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/sma_se copying pysal/model/spvcm/both_levels/sma_se/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/sma_se creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data copying pysal/model/spvcm/both_levels/tests/data/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data copying pysal/model/spvcm/tests/data/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/sma copying pysal/model/spvcm/lower_level/sma/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/sma copying pysal/model/spvcm/lower_level/sma/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/sma creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/se copying pysal/model/spvcm/lower_level/se/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/se copying pysal/model/spvcm/lower_level/se/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/se creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests copying pysal/model/spvcm/lower_level/tests/make_data.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests copying pysal/model/spvcm/lower_level/tests/test_lower_se.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests copying pysal/model/spvcm/lower_level/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests copying pysal/model/spvcm/lower_level/tests/test_lower_sma.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/sma copying pysal/model/spvcm/upper_level/sma/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/sma copying pysal/model/spvcm/upper_level/sma/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/sma creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/se copying pysal/model/spvcm/upper_level/se/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/se copying pysal/model/spvcm/upper_level/se/model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/se creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests copying pysal/model/spvcm/upper_level/tests/make_data.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests copying pysal/model/spvcm/upper_level/tests/test_upper_se.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests copying pysal/model/spvcm/upper_level/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests copying pysal/model/spvcm/upper_level/tests/test_upper_sma.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests/data copying pysal/model/spvcm/upper_level/tests/data/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests/data creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests copying pysal/model/mgwr/tests/test_gwr.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests copying pysal/model/mgwr/tests/test_sel_bw.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests copying pysal/model/mgwr/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests copying pysal/model/mgwr/tests/test_kernels.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint/tests copying pysal/model/spint/tests/test_count_model.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint/tests copying pysal/model/spint/tests/test_vec_SA.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint/tests copying pysal/model/spint/tests/test_gravity.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint/tests copying pysal/model/spint/tests/test_dispersion.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint/tests copying pysal/model/spint/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spint/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm/tests copying pysal/model/spglm/tests/test_glm.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm/tests copying pysal/model/spglm/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/giddy.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/_viz_value_by_alpha_mpl.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/_viz_esda_mpl.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/esda.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/_viz_giddy_mpl.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/mapping.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/_viz_libpysal_mpl.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/_bk.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/libpysal.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/_viz_utils.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot copying pysal/viz/splot/_viz_bokeh.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/splot creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify copying pysal/viz/mapclassify/classifiers.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify copying pysal/viz/mapclassify/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets copying pysal/viz/mapclassify/datasets/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/tests copying pysal/viz/mapclassify/tests/test_mapclassify.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/tests copying pysal/viz/mapclassify/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/tests creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets/calemp copying pysal/viz/mapclassify/datasets/calemp/data.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets/calemp copying pysal/viz/mapclassify/datasets/calemp/__init__.py -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets/calemp creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Point copying pysal/lib/examples/Point/Point.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Point copying pysal/lib/examples/Point/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Point copying pysal/lib/examples/Point/Point.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Point copying pysal/lib/examples/Point/Point.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Point copying pysal/lib/examples/Point/Point.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Point creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_NN.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/Tokyomortality.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_GS_NN_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_NN_OFF.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyomet262.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/Readme_tokyomortality.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_NN_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_GS_NN.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyomet262.shp.xml -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_F_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_GS_F_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_GS_NN_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_NN_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/SampleTokyoMortalityGWPR.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_F.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_F_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_GS_F_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyomet262.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_NN_OFF_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_BS_NN_OFF_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/Tokyomortality.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyomet262.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyo_GS_F.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo copying pysal/lib/examples/tokyo/tokyomet262.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/tokyo creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Line copying pysal/lib/examples/Line/Line.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Line copying pysal/lib/examples/Line/Line.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Line copying pysal/lib/examples/Line/Line.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Line copying pysal/lib/examples/Line/Line.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Line copying pysal/lib/examples/Line/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Line creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sids2 copying pysal/lib/examples/sids2/sids2.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sids2 copying pysal/lib/examples/sids2/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sids2 copying pysal/lib/examples/sids2/sids2.html -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sids2 copying pysal/lib/examples/sids2/sids2.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sids2 copying pysal/lib/examples/sids2/sids2.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sids2 copying pysal/lib/examples/sids2/sids2.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sids2 copying pysal/lib/examples/sids2/sids2.swm -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sids2 creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/chicago copying pysal/lib/examples/chicago/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/chicago copying pysal/lib/examples/chicago/Chicago77.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/chicago copying pysal/lib/examples/chicago/Chicago77.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/chicago copying pysal/lib/examples/chicago/Chicago77.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/chicago creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/book copying pysal/lib/examples/book/book.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/book copying pysal/lib/examples/book/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/book copying pysal/lib/examples/book/book.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/book creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon copying pysal/lib/examples/Polygon/Polygon.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon copying pysal/lib/examples/Polygon/Polygon.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon copying pysal/lib/examples/Polygon/Polygon.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon copying pysal/lib/examples/Polygon/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon copying pysal/lib/examples/Polygon/Polygon.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/arcgis copying pysal/lib/examples/arcgis/arcgis_ohio.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/arcgis copying pysal/lib/examples/arcgis/arcgis_txt.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/arcgis copying pysal/lib/examples/arcgis/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/arcgis creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nyc_bikes copying pysal/lib/examples/nyc_bikes/nyct2010.shp.xml -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nyc_bikes copying pysal/lib/examples/nyc_bikes/nyct2010.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nyc_bikes copying pysal/lib/examples/nyc_bikes/nyc_bikes_ct.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nyc_bikes copying pysal/lib/examples/nyc_bikes/nyct2010.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nyc_bikes copying pysal/lib/examples/nyc_bikes/nyct2010.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nyc_bikes copying pysal/lib/examples/nyc_bikes/nyct2010.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nyc_bikes creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/mexico copying pysal/lib/examples/mexico/mexicojoin.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/mexico copying pysal/lib/examples/mexico/mexicojoin.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/mexico copying pysal/lib/examples/mexico/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/mexico copying pysal/lib/examples/mexico/mexicojoin.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/mexico copying pysal/lib/examples/mexico/mexico.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/mexico copying pysal/lib/examples/mexico/mexicojoin.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/mexico copying pysal/lib/examples/mexico/mexico.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/mexico creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/berlin copying pysal/lib/examples/berlin/prenzlauer.zip -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/berlin copying pysal/lib/examples/berlin/prenz_bound.zip -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/berlin creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/newhaven_nework.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/newhaven_nework.qpj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/new_haven_merged.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/newhaven_nework.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/new_haven_merged.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/new_haven_merged.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/newhaven_nework.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven copying pysal/lib/examples/newHaven/newhaven_nework.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/newHaven creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl_hom.html -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl_hom.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl_hom.wkt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl_hom.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl_hom.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl_hom.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl_hom.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl_hom_rook.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl copying pysal/lib/examples/stl/stl.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/stl creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoPeople.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoPeople.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoWater.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoWater.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/Soho_Network.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoPeople.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/Soho_Network.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/Soho_Network.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoWater.sbx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoPeople.sbx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/Soho_Network.sbn -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/Soho_Network.sbx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoWater.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoWater.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoWater.sbn -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoPeople.sbn -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/SohoPeople.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps copying pysal/lib/examples/snow_maps/Soho_Network.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/snow_maps creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/streets.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/schools.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/crimes.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/crimes.sbn -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/schools.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/crimes.sbx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/schools.sbn -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/schools.sbx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/crimes.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/streets.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/schools.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/crimes.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/crimes.shp.xml -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/schools.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/crimes.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/streets.sbx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/streets.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/streets.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/schools.shp.xml -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet copying pysal/lib/examples/geodanet/streets.sbn -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/geodanet creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net_pts_offnetwork.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/nonplanarsegments.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/nonplanarsegments.qpj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net_pts_onnetwork.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/nonplanarsegments.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/nonplanarsegments.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net_pts_onnetwork.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net_pts_offnetwork.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net_pts_offnetwork.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/nonplanarsegments.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks copying pysal/lib/examples/networks/eberly_net_pts_onnetwork.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/networks creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_GS_NN_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_GS_F_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/G_utm.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/XB.p -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_GS_F.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/G_utm.cpg -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/G_utm.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/FB.p -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/G_utm.sbn -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_GS_NN_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/GData_utm.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_BS_F_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_GS_F_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_BS_NN_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_BS_NN.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/G_utm.sbx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_GS_NN.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_BS_F_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_BS_NN_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/G_utm.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/georgia_BS_F.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/georgia/err.p -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/georgia copying pysal/lib/examples/examples.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/nat_queen_old.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/NAT.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/nat.geojson -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/natregimes.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/nat_queen.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/natregimes.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/natregimes.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/nat_trian_k20.kwt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/NAT.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat copying pysal/lib/examples/nat/NAT.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/nat creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/street_net_pts copying pysal/lib/examples/street_net_pts/street_net_pts.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/street_net_pts copying pysal/lib/examples/street_net_pts/street_net_pts.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/street_net_pts copying pysal/lib/examples/street_net_pts/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/street_net_pts copying pysal/lib/examples/street_net_pts/street_net_pts.qpj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/street_net_pts copying pysal/lib/examples/street_net_pts/street_net_pts.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/street_net_pts copying pysal/lib/examples/street_net_pts/street_net_pts.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/street_net_pts creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/guerry copying pysal/lib/examples/guerry/Guerry.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/guerry copying pysal/lib/examples/guerry/Guerry.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/guerry copying pysal/lib/examples/guerry/Guerry.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/guerry copying pysal/lib/examples/guerry/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/guerry copying pysal/lib/examples/guerry/Guerry.geojson -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/guerry copying pysal/lib/examples/guerry/Guerry.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/guerry copying pysal/lib/examples/guerry/Guerry_documentation.html -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/guerry creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/south copying pysal/lib/examples/south/south.zip -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/south copying pysal/lib/examples/south/south_queen.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/south copying pysal/lib/examples/south/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/south copying pysal/lib/examples/south/south.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/south copying pysal/lib/examples/south/south.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/south copying pysal/lib/examples/south/south_q.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/south copying pysal/lib/examples/south/south.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/south creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_GS_NN_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/quads.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/streams.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_BS_NN_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_GS_F_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_BS_NN.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_GS_F.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/streams.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_BS_F_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_BS_F.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_GS_NN_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_GS_F_listwise.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/landslides.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_BS_NN_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_GS_NN.ctl -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/quads.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/clearwater_BS_F_summary.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/streams.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater copying pysal/lib/examples/clearwater/quads.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/clearwater creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/43MUE250GC_SIR.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/43MUE250GC_SIR.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/43MUE250GC_SIR.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/map_RS_BR.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/43MUE250GC_SIR.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/map_RS_BR.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/map_RS_BR.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/43MUE250GC_SIR.cpg -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul copying pysal/lib/examples/rio_grande_do_sul/map_RS_BR.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/rio_grande_do_sul creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sacramento2 copying pysal/lib/examples/sacramento2/sacramentot2.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sacramento2 copying pysal/lib/examples/sacramento2/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sacramento2 copying pysal/lib/examples/sacramento2/sacramentot2.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sacramento2 copying pysal/lib/examples/sacramento2/sacramentot2.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sacramento2 copying pysal/lib/examples/sacramento2/sacramentot2.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sacramento2 copying pysal/lib/examples/sacramento2/sacramentot2.sbn -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sacramento2 copying pysal/lib/examples/sacramento2/sacramentot2.sbx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/sacramento2 creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income copying pysal/lib/examples/us_income/spi_download.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income copying pysal/lib/examples/us_income/states48.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income copying pysal/lib/examples/us_income/us48.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income copying pysal/lib/examples/us_income/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income copying pysal/lib/examples/us_income/usjoin.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income copying pysal/lib/examples/us_income/us48.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income copying pysal/lib/examples/us_income/us48.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/geobugs_scot -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/spdep_listw2WB_columbus -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/ohio.swm -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/wmat.dat -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/us48_INVERSE_DISTANCE.swm -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/lattice10x10.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/spat-sym-us.mat -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/wmat.mtx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/stata_sparse.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/lattice10x10.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/stata_full.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/rook31.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/rook31.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/us48_CONTIGUITY_EDGES_ONLY.swm -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/spat-sym-us.wk1 -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/rook31.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat copying pysal/lib/examples/wmat/rook31.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/wmat creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/columbus copying pysal/lib/examples/columbus/columbus.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/columbus copying pysal/lib/examples/columbus/columbus.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/columbus copying pysal/lib/examples/columbus/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/columbus copying pysal/lib/examples/columbus/columbus.json -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/columbus copying pysal/lib/examples/columbus/columbus.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/columbus copying pysal/lib/examples/columbus/columbus.html -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/columbus copying pysal/lib/examples/columbus/columbus.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/columbus creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon_Holes copying pysal/lib/examples/Polygon_Holes/Polygon_Holes.cpg -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon_Holes copying pysal/lib/examples/Polygon_Holes/Polygon_Holes.qpj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon_Holes copying pysal/lib/examples/Polygon_Holes/Polygon_Holes.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon_Holes copying pysal/lib/examples/Polygon_Holes/Polygon_Holes.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon_Holes copying pysal/lib/examples/Polygon_Holes/Polygon_Holes.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon_Holes copying pysal/lib/examples/Polygon_Holes/Polygon_Holes.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/Polygon_Holes creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/juvenile copying pysal/lib/examples/juvenile/juvenile.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/juvenile copying pysal/lib/examples/juvenile/juvenile.gwt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/juvenile copying pysal/lib/examples/juvenile/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/juvenile copying pysal/lib/examples/juvenile/juvenile.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/juvenile copying pysal/lib/examples/juvenile/juvenile.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/juvenile creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/desmith copying pysal/lib/examples/desmith/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/desmith copying pysal/lib/examples/desmith/desmith.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/desmith copying pysal/lib/examples/desmith/desmith.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/desmith creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/burkitt copying pysal/lib/examples/burkitt/burkitt.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/burkitt copying pysal/lib/examples/burkitt/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/burkitt copying pysal/lib/examples/burkitt/burkitt.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/burkitt copying pysal/lib/examples/burkitt/burkitt.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/burkitt creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim copying pysal/lib/examples/baltim/baltim.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim copying pysal/lib/examples/baltim/baltim.tri.k12.kwt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim copying pysal/lib/examples/baltim/baltim_q.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim copying pysal/lib/examples/baltim/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim copying pysal/lib/examples/baltim/baltimore.geojson -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim copying pysal/lib/examples/baltim/baltim.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim copying pysal/lib/examples/baltim/baltim_k4.gwt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim copying pysal/lib/examples/baltim/baltim.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/baltim creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/calemp copying pysal/lib/examples/calemp/calempdensity.csv -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/calemp copying pysal/lib/examples/calemp/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/calemp creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/10740 copying pysal/lib/examples/10740/10740_queen.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/10740 copying pysal/lib/examples/10740/10740_rook.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/10740 copying pysal/lib/examples/10740/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/10740 copying pysal/lib/examples/10740/10740.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/10740 copying pysal/lib/examples/10740/10740.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/10740 copying pysal/lib/examples/10740/10740.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/10740 creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_queen.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_queen.mtx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_queen.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n_points.qpj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_queen.dat -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n_points.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n_points.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia.prj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_queen.mat -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_rook.gal -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n_points.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_queen.txt -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_queen.swm -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n.qpj -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/vautm17n_points.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia.json -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia copying pysal/lib/examples/virginia/virginia_queen.wk1 -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/virginia creating /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/taz copying pysal/lib/examples/taz/README.md -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/taz copying pysal/lib/examples/taz/taz.shx -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/taz copying pysal/lib/examples/taz/taz.dbf -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/taz copying pysal/lib/examples/taz/taz.shp -> /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/taz debian/rules override_dh_auto_test make[1]: Entering directory '/<>' dh_auto_test I: pybuild pybuild:273: sh /<>/debian/copy-test-data.sh "3.8" "python3.8" "/<>" "/<>/debian/python3-pysal" "/<>/.pybuild/cpython3_3.8_pysal" "/<>/.pybuild/cpython3_3.8_pysal/build" "/usr/lib/python3.8/dist-packages" "python3-pysal" '/<>/pysal/lib/cg/tests/data' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data' '/<>/pysal/lib/cg/tests/data/alpha_05.cpg' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_05.cpg' '/<>/pysal/lib/cg/tests/data/alpha_05.dbf' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_05.dbf' '/<>/pysal/lib/cg/tests/data/alpha_05.shp' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_05.shp' '/<>/pysal/lib/cg/tests/data/alpha_05.shx' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_05.shx' '/<>/pysal/lib/cg/tests/data/alpha_auto.cpg' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_auto.cpg' '/<>/pysal/lib/cg/tests/data/alpha_auto.dbf' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_auto.dbf' '/<>/pysal/lib/cg/tests/data/alpha_auto.shp' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_auto.shp' '/<>/pysal/lib/cg/tests/data/alpha_auto.shx' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_auto.shx' '/<>/pysal/lib/cg/tests/data/alpha_fifth.cpg' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_fifth.cpg' '/<>/pysal/lib/cg/tests/data/alpha_fifth.dbf' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_fifth.dbf' '/<>/pysal/lib/cg/tests/data/alpha_fifth.shp' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_fifth.shp' '/<>/pysal/lib/cg/tests/data/alpha_fifth.shx' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_fifth.shx' '/<>/pysal/lib/cg/tests/data/alpha_fourth.cpg' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_fourth.cpg' '/<>/pysal/lib/cg/tests/data/alpha_fourth.dbf' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_fourth.dbf' '/<>/pysal/lib/cg/tests/data/alpha_fourth.shp' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_fourth.shp' '/<>/pysal/lib/cg/tests/data/alpha_fourth.shx' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_fourth.shx' '/<>/pysal/lib/cg/tests/data/alpha_tenth.cpg' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_tenth.cpg' '/<>/pysal/lib/cg/tests/data/alpha_tenth.dbf' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_tenth.dbf' '/<>/pysal/lib/cg/tests/data/alpha_tenth.shp' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_tenth.shp' '/<>/pysal/lib/cg/tests/data/alpha_tenth.shx' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/alpha_tenth.shx' '/<>/pysal/lib/cg/tests/data/pecos_points.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/pecos_points.txt' '/<>/pysal/lib/cg/tests/data/san_saba_points.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/san_saba_points.txt' '/<>/pysal/lib/cg/tests/data/study_region_huangshan_point.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/study_region_huangshan_point.txt' '/<>/pysal/lib/cg/tests/data/texas_points.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/data/texas_points.txt' '/<>/pysal/model/mgwr/tests/__init__.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/__init__.py' '/<>/pysal/model/mgwr/tests/clearwater' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_BS_F.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_BS_F.ctl' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_BS_F_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_BS_F_listwise.csv' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_BS_F_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_BS_F_summary.txt' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_BS_NN.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_BS_NN.ctl' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_BS_NN_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_BS_NN_listwise.csv' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_BS_NN_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_BS_NN_summary.txt' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_GS_F.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_GS_F.ctl' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_GS_F_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_GS_F_listwise.csv' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_GS_F_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_GS_F_summary.txt' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_GS_NN.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_GS_NN.ctl' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_GS_NN_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_GS_NN_listwise.csv' '/<>/pysal/model/mgwr/tests/clearwater/clearwater_GS_NN_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/clearwater_GS_NN_summary.txt' '/<>/pysal/model/mgwr/tests/clearwater/landslides.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/landslides.csv' '/<>/pysal/model/mgwr/tests/clearwater/quads.dbf' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/quads.dbf' '/<>/pysal/model/mgwr/tests/clearwater/quads.shp' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/quads.shp' '/<>/pysal/model/mgwr/tests/clearwater/quads.shx' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/quads.shx' '/<>/pysal/model/mgwr/tests/clearwater/streams.dbf' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/streams.dbf' '/<>/pysal/model/mgwr/tests/clearwater/streams.shp' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/streams.shp' '/<>/pysal/model/mgwr/tests/clearwater/streams.shx' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/clearwater/streams.shx' '/<>/pysal/model/mgwr/tests/ga_bs_nn_longlat_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/ga_bs_nn_longlat_listwise.csv' '/<>/pysal/model/mgwr/tests/georgia_mgwr_results.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/georgia_mgwr_results.csv' '/<>/pysal/model/mgwr/tests/local_cn.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/local_cn.csv' '/<>/pysal/model/mgwr/tests/local_corr.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/local_corr.csv' '/<>/pysal/model/mgwr/tests/local_vdp.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/local_vdp.csv' '/<>/pysal/model/mgwr/tests/local_vif.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/local_vif.csv' '/<>/pysal/model/mgwr/tests/mgwr_example.p' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/mgwr_example.p' '/<>/pysal/model/mgwr/tests/test_gwr.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/test_gwr.py' '/<>/pysal/model/mgwr/tests/test_kernels.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/test_kernels.py' '/<>/pysal/model/mgwr/tests/test_sel_bw.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/test_sel_bw.py' '/<>/pysal/model/mgwr/tests/tokyo' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo' '/<>/pysal/model/mgwr/tests/tokyo/Readme_tokyomortality.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/Readme_tokyomortality.txt' '/<>/pysal/model/mgwr/tests/tokyo/SampleTokyoMortalityGWPR.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/SampleTokyoMortalityGWPR.ctl' '/<>/pysal/model/mgwr/tests/tokyo/Tokyomortality.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/Tokyomortality.csv' '/<>/pysal/model/mgwr/tests/tokyo/Tokyomortality.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/Tokyomortality.txt' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_F.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_F.ctl' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_F_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_F_listwise.csv' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_F_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_F_summary.txt' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN.ctl' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_OFF.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_OFF.ctl' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_OFF_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_OFF_listwise.csv' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_OFF_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_OFF_summary.txt' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_listwise.csv' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_BS_NN_summary.txt' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_GS_F.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_GS_F.ctl' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_GS_F_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_GS_F_listwise.csv' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_GS_F_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_GS_F_summary.txt' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_GS_NN.ctl' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_GS_NN.ctl' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_GS_NN_listwise.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_GS_NN_listwise.csv' '/<>/pysal/model/mgwr/tests/tokyo/tokyo_GS_NN_summary.txt' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyo_GS_NN_summary.txt' '/<>/pysal/model/mgwr/tests/tokyo/tokyomet262.dbf' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyomet262.dbf' '/<>/pysal/model/mgwr/tests/tokyo/tokyomet262.prj' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyomet262.prj' '/<>/pysal/model/mgwr/tests/tokyo/tokyomet262.shp' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyomet262.shp' '/<>/pysal/model/mgwr/tests/tokyo/tokyomet262.shp.xml' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyomet262.shp.xml' '/<>/pysal/model/mgwr/tests/tokyo/tokyomet262.shx' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/mgwr/tests/tokyo/tokyomet262.shx' '/<>/pysal/model/spvcm/both_levels/tests/data/__init__.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data/__init__.py' '/<>/pysal/model/spvcm/both_levels/tests/data/generic.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data/generic.csv' '/<>/pysal/model/spvcm/both_levels/tests/data/mvcm.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data/mvcm.csv' '/<>/pysal/model/spvcm/both_levels/tests/data/sese.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data/sese.csv' '/<>/pysal/model/spvcm/both_levels/tests/data/sesma.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data/sesma.csv' '/<>/pysal/model/spvcm/both_levels/tests/data/smase.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data/smase.csv' '/<>/pysal/model/spvcm/both_levels/tests/data/smasma.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/both_levels/tests/data/smasma.csv' '/<>/pysal/model/spvcm/lower_level/tests/data' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests/data' '/<>/pysal/model/spvcm/lower_level/tests/data/__test__.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests/data/__test__.py' '/<>/pysal/model/spvcm/lower_level/tests/data/lower_se.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests/data/lower_se.csv' '/<>/pysal/model/spvcm/lower_level/tests/data/lower_sma.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/lower_level/tests/data/lower_sma.csv' '/<>/pysal/model/spvcm/upper_level/tests/data/__init__.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests/data/__init__.py' '/<>/pysal/model/spvcm/upper_level/tests/data/upper_se.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests/data/upper_se.csv' '/<>/pysal/model/spvcm/upper_level/tests/data/upper_sma.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/upper_level/tests/data/upper_sma.csv' '/<>/pysal/model/spvcm/tests/data/__init__.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/__init__.py' '/<>/pysal/model/spvcm/tests/data/effective_size.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/effective_size.json' '/<>/pysal/model/spvcm/tests/data/geweke.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/geweke.json' '/<>/pysal/model/spvcm/tests/data/hpd_interval.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/hpd_interval.json' '/<>/pysal/model/spvcm/tests/data/mcse_0.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/mcse_0.json' '/<>/pysal/model/spvcm/tests/data/mcse_1.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/mcse_1.json' '/<>/pysal/model/spvcm/tests/data/mcse_2.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/mcse_2.json' '/<>/pysal/model/spvcm/tests/data/mcse_3.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/mcse_3.json' '/<>/pysal/model/spvcm/tests/data/mcse_bartlett.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/mcse_bartlett.json' '/<>/pysal/model/spvcm/tests/data/mcse_bm.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/mcse_bm.json' '/<>/pysal/model/spvcm/tests/data/mcse_hanning.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/mcse_hanning.json' '/<>/pysal/model/spvcm/tests/data/mcse_obm.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/mcse_obm.json' '/<>/pysal/model/spvcm/tests/data/psrf_brooks.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/psrf_brooks.json' '/<>/pysal/model/spvcm/tests/data/psrf_gr.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/psrf_gr.json' '/<>/pysal/model/spvcm/tests/data/psrf_noburn.json' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/psrf_noburn.json' '/<>/pysal/model/spvcm/tests/data/south_mvcm_5000_0.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/south_mvcm_5000_0.csv' '/<>/pysal/model/spvcm/tests/data/south_mvcm_5000_1.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/south_mvcm_5000_1.csv' '/<>/pysal/model/spvcm/tests/data/south_mvcm_5000_2.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/south_mvcm_5000_2.csv' '/<>/pysal/model/spvcm/tests/data/south_mvcm_5000_3.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/tests/data/south_mvcm_5000_3.csv' '/<>/pysal/viz/mapclassify/datasets/calemp/README.md' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets/calemp/README.md' '/<>/pysal/viz/mapclassify/datasets/calemp/__init__.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets/calemp/__init__.py' '/<>/pysal/viz/mapclassify/datasets/calemp/calempdensity.csv' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets/calemp/calempdensity.csv' '/<>/pysal/viz/mapclassify/datasets/calemp/data.py' -> '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/viz/mapclassify/datasets/calemp/data.py' I: pybuild base:217: cd /<>/.pybuild/cpython3_3.8_pysal/build; python3.8 -m nose -v --verbose nose.config: INFO: Ignoring files matching ['^\\.', '^_', '^setup\\.py$'] /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/spintW.py:53: SyntaxWarning: "is not" with a literal. Did you mean "!="? if Wo.transform is not 'b': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/spintW.py:59: SyntaxWarning: "is not" with a literal. Did you mean "!="? if Wd.transform is not 'b': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/moran.py:743: SyntaxWarning: "is" with a literal. Did you mean "=="? if swapname is '': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/moran.py:1410: SyntaxWarning: "is" with a literal. Did you mean "=="? if swapname is '': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tabular.py:77: SyntaxWarning: "is not" with a literal. Did you mean "!="? if pvalue is not '': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tabular.py:96: SyntaxWarning: "is not" with a literal. Did you mean "!="? if swapname is not '': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/tabular.py:151: SyntaxWarning: "is not" with a literal. Did you mean "!="? if real_swapname is not '': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py:764: SyntaxWarning: "is" with a literal. Did you mean "=="? if distribution is 'uniform': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py:766: SyntaxWarning: "is" with a literal. Did you mean "=="? elif distribution is 'poisson': /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spglm/utils.py:367: SyntaxWarning: "is not" with a literal. Did you mean "!="? if resetlist is not (): /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/utils.py:146: SyntaxWarning: "is" with a literal. Did you mean "=="? if np.isinf(ldet) or sgn is 0: /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/abstracts.py:263: SyntaxWarning: "is" with a literal. Did you mean "=="? if chains is () and kwargs != dict(): /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/abstracts.py:265: SyntaxWarning: "is not" with a literal. Did you mean "!="? if chains is not (): /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/abstracts.py:10: UserWarning: The `dill` module is required to use the sqlite backend fully. from .sqlite import head_to_sql, start_sql /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/plotting.py:37: SyntaxWarning: "is" with a literal. Did you mean "=="? if thin is None or thin is 0: Test method ... ok test_by_col (pysal.explore.esda.tests.test_gamma.Gamma_Tester) ... ok Test method ... ok test_by_col (pysal.explore.esda.tests.test_gamma.Gamma_Tester) ... ok test_Geary (pysal.explore.esda.tests.test_geary.Geary_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_geary.Geary_Tester) ... ok test_Geary (pysal.explore.esda.tests.test_geary.Geary_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_geary.Geary_Tester) ... ok test_G_Local_Binary (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_G_Local_Row_Standardized (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_G_star_Local_Binary (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_G_star_Row_Standardized (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_G_Local_Binary (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_G_Local_Row_Standardized (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_G_star_Local_Binary (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_G_star_Row_Standardized (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_getisord.G_Local_Tester) ... ok test_G (pysal.explore.esda.tests.test_getisord.G_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_getisord.G_Tester) ... ok Test method ... ok test_by_col (pysal.explore.esda.tests.test_join_counts.Join_Counts_Tester) ... ok Test method ... ok test_by_col (pysal.explore.esda.tests.test_join_counts.Join_Counts_Tester) ... ok Test the main class ... ok test_Moran_BV_matrix (pysal.explore.esda.tests.test_moran.Moran_BV_matrix_Tester) ... ok test_Moran_Local_BV (pysal.explore.esda.tests.test_moran.Moran_Local_BV_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_moran.Moran_Local_BV_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_moran.Moran_Local_Rate_Tester) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/moran.py:1418: FutureWarning: from_items is deprecated. Please use DataFrame.from_dict(dict(items), ...) instead. DataFrame.from_dict(OrderedDict(items)) may be used to preserve the key order. rate_df = out_df.from_items(list(zip(names, rates))) #trick to avoid importing pandas ok test_moran_rate (pysal.explore.esda.tests.test_moran.Moran_Local_Rate_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_moran.Moran_Local_Rate_Tester) ... ok test_moran_rate (pysal.explore.esda.tests.test_moran.Moran_Local_Rate_Tester) ... ok test_Moran_Local (pysal.explore.esda.tests.test_moran.Moran_Local_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_moran.Moran_Local_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_moran.Moran_Rate_Tester) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/moran.py:751: FutureWarning: from_items is deprecated. Please use DataFrame.from_dict(dict(items), ...) instead. DataFrame.from_dict(OrderedDict(items)) may be used to preserve the key order. rate_df = out_df.from_items(list(zip(names, rates))) #trick to avoid importing pandas ok test_moran_rate (pysal.explore.esda.tests.test_moran.Moran_Rate_Tester) ... ok test_by_col (pysal.explore.esda.tests.test_moran.Moran_Tester) ... ok test_moran (pysal.explore.esda.tests.test_moran.Moran_Tester) ... ok test_sids (pysal.explore.esda.tests.test_moran.Moran_Tester) ... ok test_variance (pysal.explore.esda.tests.test_moran.Moran_Tester) ... ok test_z_consistency (pysal.explore.esda.tests.test_moran.Moran_Tester) ... ok test_crude_age_standardization (pysal.explore.esda.tests.test_smoothing.TestAgeStd) ... ok test_direct_age_standardization (pysal.explore.esda.tests.test_smoothing.TestAgeStd) ... ok test_indirect_age_standardization (pysal.explore.esda.tests.test_smoothing.TestAgeStd) ... ok test_flatten (pysal.explore.esda.tests.test_smoothing.TestFlatten) ... ok test_Headbanging_Median_Rate (pysal.explore.esda.tests.test_smoothing.TestHB) ... SKIP: Deprecated test_Headbanging_Median_Rate_tabular (pysal.explore.esda.tests.test_smoothing.TestHB) ... SKIP: Deprecated test_Headbanging_Triples (pysal.explore.esda.tests.test_smoothing.TestHB) ... SKIP: Deprecated test_Age_Adjusted_Smoother (pysal.explore.esda.tests.test_smoothing.TestKernel_AgeAdj_SM) ... ok test_Age_Adjusted_Smoother_tabular (pysal.explore.esda.tests.test_smoothing.TestKernel_AgeAdj_SM) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/smoothing.py:1207: FutureWarning: from_items is deprecated. Please use DataFrame.from_dict(dict(items), ...) instead. DataFrame.from_dict(OrderedDict(items)) may be used to preserve the key order. rdf = pd.DataFrame.from_items(rdf) ok test_Disk_Smoother (pysal.explore.esda.tests.test_smoothing.TestKernel_AgeAdj_SM) ... ok test_Disk_Smoother_tabular (pysal.explore.esda.tests.test_smoothing.TestKernel_AgeAdj_SM) ... ok test_Kernel_Smoother (pysal.explore.esda.tests.test_smoothing.TestKernel_AgeAdj_SM) ... ok test_Kernel_Smoother_tabular (pysal.explore.esda.tests.test_smoothing.TestKernel_AgeAdj_SM) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/esda/smoothing.py:1582: FutureWarning: from_items is deprecated. Please use DataFrame.from_dict(dict(items), ...) instead. DataFrame.from_dict(OrderedDict(items)) may be used to preserve the key order. res.append(pd.DataFrame.from_items(items)) ok test_Spatial_Filtering (pysal.explore.esda.tests.test_smoothing.TestKernel_AgeAdj_SM) ... ok test_Empirical_Bayes (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Empirical_Bayes_tabular (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Excess_Risk (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Excess_Risk_tabular (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Spatial_Empirical_Bayes (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Spatial_Empirical_Bayes_tabular (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Spatial_Median_Rate (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Spatial_Median_Rate_tabular (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Spatial_Rate (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_Spatial_Rate_tabular (pysal.explore.esda.tests.test_smoothing.TestSRate) ... ok test_assuncao_rate (pysal.explore.esda.tests.test_smoothing.TestUtils) ... ok test_choynowski (pysal.explore.esda.tests.test_smoothing.TestUtils) ... ok test_standardized_mortality_ratio (pysal.explore.esda.tests.test_smoothing.TestUtils) ... ok test_sum_by_n (pysal.explore.esda.tests.test_smoothing.TestUtils) ... ok test_assuncao_rate (pysal.explore.esda.tests.test_smoothing.TestUtils) ... ok test_choynowski (pysal.explore.esda.tests.test_smoothing.TestUtils) ... ok test_standardized_mortality_ratio (pysal.explore.esda.tests.test_smoothing.TestUtils) ... ok test_sum_by_n (pysal.explore.esda.tests.test_smoothing.TestUtils) ... ok test_weighted_median (pysal.explore.esda.tests.test_smoothing.TestWMean) ... ok test_rose (pysal.explore.giddy.tests.test_directional.Rose_Tester) ... ok test_rose (pysal.explore.giddy.tests.test_directional.Rose_Tester) ... ok test_fmpt (pysal.explore.giddy.tests.test_ergodic.Fmpt_Tester) ... ok test_steady_state (pysal.explore.giddy.tests.test_ergodic.SteadyState_Tester) ... ok test_var_fmpt (pysal.explore.giddy.tests.test_ergodic.VarFmpt_Tester) ... ok test_var_fmpt (pysal.explore.giddy.tests.test_ergodic.VarFmpt_Tester) ... ok test___init__ (pysal.explore.giddy.tests.test_markov.test_LISA_Markov) ... ok test___init__ (pysal.explore.giddy.tests.test_markov.test_Markov) ... ok test___init__ (pysal.explore.giddy.tests.test_markov.test_Spatial_Markov) ... ok test_cutoff (pysal.explore.giddy.tests.test_markov.test_Spatial_Markov) ... ok test_discretized (pysal.explore.giddy.tests.test_markov.test_Spatial_Markov) ... ok test_chi2 (pysal.explore.giddy.tests.test_markov.test_chi2) ... ok test___init__ (pysal.explore.giddy.tests.test_markov.test_kullback) ... ok test___init__ (pysal.explore.giddy.tests.test_markov.test_prais) ... ok test___init__ (pysal.explore.giddy.tests.test_mobility.test_markovMobility) ... ok test___init__ (pysal.explore.giddy.tests.test_mobility.test_shorrock) ... ok test_SpatialTau (pysal.explore.giddy.tests.test_rank.SpatialTau_Tester) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 7 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_Tau (pysal.explore.giddy.tests.test_rank.Tau_Tester) ... ok test_Tau (pysal.explore.giddy.tests.test_rank.Tau_Tester) ... ok test_Theta (pysal.explore.giddy.tests.test_rank.Theta_Tester) ... ok test_get_lower (pysal.explore.giddy.tests.test_util.GetLower_Tester) ... ok test_get_lower (pysal.explore.giddy.tests.test_util.GetLower_Tester) ... ok test_shuffle_matrix (pysal.explore.giddy.tests.test_util.ShuffleMatrix_Tester) ... ok test_Gini (pysal.explore.inequality.tests.test_gini.Gini_Tester) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 5 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_Gini_Spatial (pysal.explore.inequality.tests.test_gini.Gini_Tester) ... ok test___init__ (pysal.explore.inequality.tests.test_theil.test_Theil) ... ok test___init__ (pysal.explore.inequality.tests.test_theil.test_TheilD) ... ok test___init__ (pysal.explore.inequality.tests.test_theil.test_TheilDSim) ... ok test_centrography_ellipse (pysal.explore.pointpats.tests.test_centrography.TestCentrography) ... ok test_centrography_euclidean_median (pysal.explore.pointpats.tests.test_centrography.TestCentrography) ... ok test_centrography_hull (pysal.explore.pointpats.tests.test_centrography.TestCentrography) ... ok test_centrography_mbr (pysal.explore.pointpats.tests.test_centrography.TestCentrography) ... ok test_centrography_mean_center (pysal.explore.pointpats.tests.test_centrography.TestCentrography) ... ok test_centrography_std_distance (pysal.explore.pointpats.tests.test_centrography.TestCentrography) ... ok test_distance_statistics_F (pysal.explore.pointpats.tests.test_distance_statistics.TestDistanceStatistics) ... ok test_distance_statistics_G (pysal.explore.pointpats.tests.test_distance_statistics.TestDistanceStatistics) ... ok test_distance_statistics_J (pysal.explore.pointpats.tests.test_distance_statistics.TestDistanceStatistics) ... ok test_distance_statistics_K (pysal.explore.pointpats.tests.test_distance_statistics.TestDistanceStatistics) ... ok test_distance_statistics_L (pysal.explore.pointpats.tests.test_distance_statistics.TestDistanceStatistics) ... ok test_point_pattern_explode (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_find_pairs (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_flip_coordinates (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_hull_area (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_knn (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_knn_error (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_knn_other (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_knn_other_error (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_lambda_hull (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_lambda_mbb (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_max_nnd (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_mbb_area (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_mean_nnd (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_min_nnd (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_point_pattern_n (pysal.explore.pointpats.tests.test_pointpattern.TestPointPattern) ... ok test_QStatistic (pysal.explore.pointpats.tests.test_quadrat_statistics.TestQuadratStatistics) ... ok test_RectangleM1 (pysal.explore.pointpats.tests.test_quadrat_statistics.TestQuadratStatistics) ... ok test_RectangleM2 (pysal.explore.pointpats.tests.test_quadrat_statistics.TestQuadratStatistics) ... ok test_contiguity_weights (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetwork) ... ok test_contiguity_weights_graph (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetwork) ... ok test_distance_band_weights (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetwork) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 7 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_edge_segmentation (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetwork) ... ok test_enum_links_node (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetwork) ... ok test_extract_network (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetwork) ... ok test_network_f (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkAnalysis) ... ERROR test_network_g (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkAnalysis) ... ERROR test_network_k (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkAnalysis) ... ERROR test_add_point_pattern (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ... ERROR test_all_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ... ERROR test_count_per_edge (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ... ERROR test_count_per_graph_edge (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ... ERROR test_nearest_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ... ERROR test_simulate_normal_observations (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ... ERROR test_simulate_poisson_observations (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ... ERROR test_compute_length (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkUtils) ... ok test_dijkstra (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkUtils) ... ok test_dijkstra_mp (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkUtils) ... ok test_generate_tree (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkUtils) ... ok test_get_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkUtils) ... ok test_snap_points_on_segments (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkUtils) ... ok test_square_distance_point_segment (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkUtils) ... ok test_contiguity_weights (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetwork) ... ok test_contiguity_weights_graph (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetwork) ... ok test_distance_band_weights (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetwork) ... ok test_edge_segmentation (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetwork) ... ok test_enum_links_node (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetwork) ... ok test_extract_network (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetwork) ... ok test_network_f (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkAnalysis) ... ERROR test_network_g (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkAnalysis) ... ERROR test_network_k (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkAnalysis) ... ERROR test_add_point_pattern (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ... ERROR test_all_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ... ERROR test_count_per_edge (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ... ERROR test_count_per_graph_edge (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ... ERROR test_nearest_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ... ERROR test_simulate_normal_observations (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ... ERROR test_simulate_poisson_observations (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ... ERROR test_compute_length (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkUtils) ... ok test_dijkstra (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkUtils) ... ok test_dijkstra_mp (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkUtils) ... ok test_generate_tree (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkUtils) ... ok test_get_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkUtils) ... ok test_snap_points_on_segments (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkUtils) ... ok test_square_distance_point_segment (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkUtils) ... ok test_contiguity_weights (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetwork) ... ok test_contiguity_weights_graph (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetwork) ... ok test_distance_band_weights (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetwork) ... ok test_edge_segmentation (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetwork) ... ok test_enum_links_node (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetwork) ... ok test_extract_network (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetwork) ... ok test_network_f (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkAnalysis) ... ERROR test_network_g (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkAnalysis) ... ERROR test_network_k (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkAnalysis) ... ERROR test_add_point_pattern (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ... ERROR test_all_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ... ERROR test_count_per_edge (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ... ERROR test_count_per_graph_edge (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ... ERROR test_nearest_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ... ERROR test_simulate_normal_observations (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ... ERROR test_simulate_poisson_observations (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ... ERROR test_compute_length (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkUtils) ... ok test_dijkstra (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkUtils) ... ok test_dijkstra_mp (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkUtils) ... ok test_generate_tree (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkUtils) ... ok test_get_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkUtils) ... ok test_snap_points_on_segments (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkUtils) ... ok test_square_distance_point_segment (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkUtils) ... ok test_contiguity_weights (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetwork) ... ok test_contiguity_weights_graph (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetwork) ... ok test_distance_band_weights (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetwork) ... ok test_edge_segmentation (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetwork) ... ok test_enum_links_node (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetwork) ... ok test_extract_network (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetwork) ... ok test_network_f (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkAnalysis) ... ERROR test_network_g (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkAnalysis) ... ERROR test_network_k (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkAnalysis) ... ERROR test_add_point_pattern (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ... ERROR test_all_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ... ERROR test_count_per_edge (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ... ERROR test_count_per_graph_edge (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ... ERROR test_nearest_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ... ERROR test_simulate_normal_observations (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ... ERROR test_simulate_poisson_observations (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ... ERROR test_compute_length (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkUtils) ... ok test_dijkstra (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkUtils) ... ok test_dijkstra_mp (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkUtils) ... ok test_generate_tree (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkUtils) ... ok test_get_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkUtils) ... ok test_snap_points_on_segments (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkUtils) ... ok test_square_distance_point_segment (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkUtils) ... ok test_area (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_bbox (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_bounding_box (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_centroid (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_holes (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_len (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_parts (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_perimeter (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_segments (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_vertices (pysal.lib.cg.ops.tests.test_accessors.Test_Accessors) ... ok test_almost_equals (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_area (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_boundary (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_bounds (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_buffer (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_centroid (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_contains (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_convex_hull (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_crosses (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_difference (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_disjoint (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_distance (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_envelope (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_equals (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_equals_exact (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_has_z (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_interpolate (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_intersection (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_intersects (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg PySAL doesn't really support empty shapes. Like, the following errors ... SKIP: skipping shapely during reorg test_is_ring (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_is_simple (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_is_valid (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_length (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_overlaps (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_project (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_relate (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_representative_point (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_simplify (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_symmetric_difference (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_to_wkb (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_to_wkt (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_touches (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_union (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_within (pysal.lib.cg.ops.tests.test_shapely.Test_Shapely) ... SKIP: skipping shapely during reorg test_clip (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_difference (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_dissolve (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_erase (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_intersection (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_round_trip (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_spatial_join (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_spatial_overlay (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_symmetric_difference (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_union (pysal.lib.cg.ops.tests.test_tabular.Test_Tabular) ... ok test_alpha_shapes (pysal.lib.cg.tests.test_ashapes.Test_Alpha_Shapes) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/test_ashapes.py:24: FutureWarning: `item` has been deprecated and will be removed in a future version self.a05 = geopandas.read_file(os.path.join(this_directory, 'data/alpha_05.shp')).geometry.item() ERROR test_auto (pysal.lib.cg.tests.test_ashapes.Test_Alpha_Shapes) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/test_ashapes.py:24: FutureWarning: `item` has been deprecated and will be removed in a future version self.a05 = geopandas.read_file(os.path.join(this_directory, 'data/alpha_05.shp')).geometry.item() ERROR test_multipart_chain (pysal.lib.cg.tests.test_geoJSON.test_MultiLineString) ... ok Tests conversion of polygons with multiple shells to ... ok test_PolygonLocator (pysal.lib.cg.tests.test_locators.PolygonLocator_Tester) ... ok test_inside (pysal.lib.cg.tests.test_locators.PolygonLocator_Tester) ... ok test_overlapping (pysal.lib.cg.tests.test_locators.PolygonLocator_Tester) ... ok test_PolygonLocator (pysal.lib.cg.tests.test_locators.PolygonLocator_Tester) ... ok test_inside (pysal.lib.cg.tests.test_locators.PolygonLocator_Tester) ... ok test_overlapping (pysal.lib.cg.tests.test_locators.PolygonLocator_Tester) ... ok Tests if the class could successfully determine if a point is inside of a polygon ... ok test_rtree (pysal.lib.cg.tests.test_rtree.Pyrtree_Tester) ... ERROR test_rtree (pysal.lib.cg.tests.test_rtree.Pyrtree_Tester) ... ERROR test_nearest_1 (pysal.lib.cg.tests.test_segmentLocator.SegmentGrid_Tester) ... ok test_nearest_2 (pysal.lib.cg.tests.test_segmentLocator.SegmentGrid_Tester) ... ok test_nearest_1 (pysal.lib.cg.tests.test_segmentLocator.SegmentGrid_Tester) ... ok test_nearest_2 (pysal.lib.cg.tests.test_segmentLocator.SegmentGrid_Tester) ... ok Generic testing that no exception is thrown. ... ok Test correctness with multiple parts. ... ok Test correctness with multiple parts and zero-length point-to-point distances. ... ok Generic testing of parts functionality. ... ok Testing for repeated vertices and multiple parts. ... ok Tests a variety of generic cases. ... ok Tests a variety of generic and special cases (+-infinity). ... ok Tests a variety of generic and special cases (+-infinity). ... ok Tests corner cases. ... ok Tests corner cases. ... ok Test corner cases for horizontal segment starting at origin. ... ok Test corner cases for vertical segment ending at origin. ... ok Test corner cases for non-axis-aligned segment not through origin. ... ok Test corner cases for horizontal segment starting at origin. ... ok Test corner cases for vertical segment ending at origin. ... ok Test corner cases for non-axis-aligned segment not through origin. ... ok Tests corner cases. ... ok Tests corner cases. ... ok Tests whether points are created without issue. ... ok Tests whether the string produced is valid for corner cases. ... ok Test various input configurations (list vs. lists of lists, holes) ... ok Test multiple parts. ... ok Test holes. ... ok Test polygons with vertices in both orders (cw, ccw). ... ok Test polygons with multiple parts. ... ok Test polygons with multiple parts of the same size. ... ok Test polygons with multiple parts of different size. ... ok test_contains_point (pysal.lib.cg.tests.test_shapes.test_Polygon) ... ok Test for correct vertex values/order. ... ok Test for multiple holes. ... ok Test for correct vertex values/order. ... ok Test with multiple parts. ... ok Test with holes. ... ok Test for correct values/order of vertices. ... ok Test for multiple parts. ... ok Tests generic cases. ... ok Test exceptions are thrown correctly. ... ok Test rectangles with zero width/height ... ok Test rectangles with zero height. ... ok Test with rectangles of zero width or height. ... ok Test repeated scaling. ... ok Test scaling of rectangles with zero width/height.. ... ok Test rectangles with zero width. ... ok test_arcdist (pysal.lib.cg.tests.test_sphere.Sphere) ... ok test_arcdist2linear (pysal.lib.cg.tests.test_sphere.Sphere) ... ok test_geogrid (pysal.lib.cg.tests.test_sphere.Sphere) ... ok test_geointerpolate (pysal.lib.cg.tests.test_sphere.Sphere) ... ok test_harcdist (pysal.lib.cg.tests.test_sphere.Sphere) ... ok test_linear2arcdist (pysal.lib.cg.tests.test_sphere.Sphere) ... ok test_radangle (pysal.lib.cg.tests.test_sphere.Sphere) ... ok test_toXYZ (pysal.lib.cg.tests.test_sphere.Sphere) ... ok test_bbcommon (pysal.lib.cg.tests.test_standalone.TestBbcommon) ... ok test_bbcommon_floats (pysal.lib.cg.tests.test_standalone.TestBbcommon) ... ok test_bbcommon_nested (pysal.lib.cg.tests.test_standalone.TestBbcommon) ... ok test_bbcommon_same (pysal.lib.cg.tests.test_standalone.TestBbcommon) ... ok test_bbcommon_shared_corner (pysal.lib.cg.tests.test_standalone.TestBbcommon) ... ok test_bbcommon_shared_edge (pysal.lib.cg.tests.test_standalone.TestBbcommon) ... ok test_bbcommon_top (pysal.lib.cg.tests.test_standalone.TestBbcommon) ... ok test_convex_hull (pysal.lib.cg.tests.test_standalone.TestConvexHull) ... ok test_distance_matrix (pysal.lib.cg.tests.test_standalone.TestDistanceMatrix) ... ok test_get_angle_between (pysal.lib.cg.tests.test_standalone.TestGetAngleBetween) ... ok test_get_angle_between_expect45 (pysal.lib.cg.tests.test_standalone.TestGetAngleBetween) ... ok test_get_angle_between_expect90 (pysal.lib.cg.tests.test_standalone.TestGetAngleBetween) ... ok test_get_bounding_box (pysal.lib.cg.tests.test_standalone.TestGetBoundingBox) ... ok test_get_point_at_angle_and_dist (pysal.lib.cg.tests.test_standalone.TestGetPointAtAngleAndDist) ... ok test_get_point_at_angle_and_dist_diag (pysal.lib.cg.tests.test_standalone.TestGetPointAtAngleAndDist) ... ok test_get_point_at_angle_and_dist_diag_45 (pysal.lib.cg.tests.test_standalone.TestGetPointAtAngleAndDist) ... ok test_get_point_at_angle_and_dist_diag_90 (pysal.lib.cg.tests.test_standalone.TestGetPointAtAngleAndDist) ... ok test_get_points_dist (pysal.lib.cg.tests.test_standalone.TestGetPointsDist) ... ok test_get_points_dist_alongX (pysal.lib.cg.tests.test_standalone.TestGetPointsDist) ... ok test_get_points_dist_alongY (pysal.lib.cg.tests.test_standalone.TestGetPointsDist) ... ok test_get_points_dist_diag (pysal.lib.cg.tests.test_standalone.TestGetPointsDist) ... ok test_get_polygon_point_dist (pysal.lib.cg.tests.test_standalone.TestGetPolygonPointDist) ... ok test_get_polygon_point_dist_inside (pysal.lib.cg.tests.test_standalone.TestGetPolygonPointDist) ... ok test_get_polygon_point_dist_on_edge (pysal.lib.cg.tests.test_standalone.TestGetPolygonPointDist) ... ok test_get_polygon_point_dist_on_vertex (pysal.lib.cg.tests.test_standalone.TestGetPolygonPointDist) ... ok test_get_polygon_point_intersect (pysal.lib.cg.tests.test_standalone.TestGetPolygonPointIntersect) ... ok test_get_polygon_point_intersect_on_edge (pysal.lib.cg.tests.test_standalone.TestGetPolygonPointIntersect) ... ok test_get_polygon_point_intersect_on_vertex (pysal.lib.cg.tests.test_standalone.TestGetPolygonPointIntersect) ... ok test_get_polygon_point_intersect_outside (pysal.lib.cg.tests.test_standalone.TestGetPolygonPointIntersect) ... ok test_get_ray_segment_intersect (pysal.lib.cg.tests.test_standalone.TestGetRaySegmentIntersect) ... ok test_get_ray_segment_intersect_edge (pysal.lib.cg.tests.test_standalone.TestGetRaySegmentIntersect) ... ok test_get_ray_segment_intersect_no_intersect (pysal.lib.cg.tests.test_standalone.TestGetRaySegmentIntersect) ... ok test_get_ray_segment_intersect_orgin (pysal.lib.cg.tests.test_standalone.TestGetRaySegmentIntersect) ... ok test_get_ray_segment_intersect_segment (pysal.lib.cg.tests.test_standalone.TestGetRaySegmentIntersect) ... ok test_get_rectangle_point_intersect (pysal.lib.cg.tests.test_standalone.TestGetRectanglePointIntersect) ... ok test_get_rectangle_point_intersect_on_edge (pysal.lib.cg.tests.test_standalone.TestGetRectanglePointIntersect) ... ok test_get_rectangle_point_intersect_on_vertex (pysal.lib.cg.tests.test_standalone.TestGetRectanglePointIntersect) ... ok test_get_rectangle_point_intersect_outside (pysal.lib.cg.tests.test_standalone.TestGetRectanglePointIntersect) ... ok test_get_rectangle_rectangle_intersection_leftright (pysal.lib.cg.tests.test_standalone.TestGetRectangleRectangleIntersection) ... ok test_get_rectangle_rectangle_intersection_nested (pysal.lib.cg.tests.test_standalone.TestGetRectangleRectangleIntersection) ... ok test_get_rectangle_rectangle_intersection_no_intersect (pysal.lib.cg.tests.test_standalone.TestGetRectangleRectangleIntersection) ... ok test_get_rectangle_rectangle_intersection_shared_corner (pysal.lib.cg.tests.test_standalone.TestGetRectangleRectangleIntersection) ... ok test_get_rectangle_rectangle_intersection_shared_edge (pysal.lib.cg.tests.test_standalone.TestGetRectangleRectangleIntersection) ... ok test_get_rectangle_rectangle_intersection_shifted_edge (pysal.lib.cg.tests.test_standalone.TestGetRectangleRectangleIntersection) ... ok test_get_rectangle_rectangle_intersection_topbottom (pysal.lib.cg.tests.test_standalone.TestGetRectangleRectangleIntersection) ... ok test_get_segment_point_diag (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointDist) ... ok test_get_segment_point_diag_with_dist (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointDist) ... ok test_get_segment_point_dist (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointDist) ... ok test_get_segment_point_dist_on_endPoint (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointDist) ... ok test_get_segment_point_dist_on_middle (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointDist) ... ok test_get_segment_point_intersect (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointIntersect) ... ok test_get_segment_point_intersect_angle (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointIntersect) ... ok test_get_segment_point_intersect_floats (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointIntersect) ... ok test_get_segment_point_intersect_floats_no_intersect (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointIntersect) ... ok test_get_segment_point_intersect_left_end (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointIntersect) ... ok test_get_segment_point_intersect_no_intersect (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointIntersect) ... ok test_get_segment_point_intersect_no_intersect_collinear (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointIntersect) ... ok test_get_segment_point_intersect_right_end (pysal.lib.cg.tests.test_standalone.TestGetSegmentPointIntersect) ... ok test_get_segments_intersect (pysal.lib.cg.tests.test_standalone.TestGetSegmentsIntersect) ... ok test_get_segments_intersect_angles (pysal.lib.cg.tests.test_standalone.TestGetSegmentsIntersect) ... ok test_get_segments_intersect_floats (pysal.lib.cg.tests.test_standalone.TestGetSegmentsIntersect) ... ok test_get_segments_intersect_nested (pysal.lib.cg.tests.test_standalone.TestGetSegmentsIntersect) ... ok test_get_segments_intersect_no_intersect (pysal.lib.cg.tests.test_standalone.TestGetSegmentsIntersect) ... ok test_get_segments_intersect_overlap (pysal.lib.cg.tests.test_standalone.TestGetSegmentsIntersect) ... ok test_get_segments_intersect_same (pysal.lib.cg.tests.test_standalone.TestGetSegmentsIntersect) ... ok test_get_segments_intersect_shared_vert (pysal.lib.cg.tests.test_standalone.TestGetSegmentsIntersect) ... ok test_get_shared_segments (pysal.lib.cg.tests.test_standalone.TestGetSharedSegments) ... ok test_get_shared_segments_non_bool (pysal.lib.cg.tests.test_standalone.TestGetSharedSegments) ... ok test_is_clockwise (pysal.lib.cg.tests.test_standalone.TestIsClockwise) ... ok test_is_clockwise_big (pysal.lib.cg.tests.test_standalone.TestIsClockwise) ... ok test_is_clockwise_expect_false (pysal.lib.cg.tests.test_standalone.TestIsClockwise) ... ok test_is_collinear (pysal.lib.cg.tests.test_standalone.TestIsCollinear) ... ok test_is_collinear_AlongX (pysal.lib.cg.tests.test_standalone.TestIsCollinear) ... ok test_is_collinear_AlongY (pysal.lib.cg.tests.test_standalone.TestIsCollinear) ... ok test_is_collinear_expectFalse (pysal.lib.cg.tests.test_standalone.TestIsCollinear) ... ok test_is_collinear_random (pysal.lib.cg.tests.test_standalone.TestIsCollinear) ... ok test_is_collinear_random2 (pysal.lib.cg.tests.test_standalone.TestIsCollinear) ... ok Given: p1 = (0.1, 0.2), p2 = (0.2, 0.3), p3 = (0.3, 0.4) ... ok test_point_touches_rectangle_inside (pysal.lib.cg.tests.test_standalone.TestPointTouchesRectangle) ... ok test_point_touches_rectangle_on_corner (pysal.lib.cg.tests.test_standalone.TestPointTouchesRectangle) ... ok test_point_touches_rectangle_on_edge (pysal.lib.cg.tests.test_standalone.TestPointTouchesRectangle) ... ok test_point_touches_rectangle_outside (pysal.lib.cg.tests.test_standalone.TestPointTouchesRectangle) ... ok test_voronoi (pysal.lib.cg.tests.test_voronoi.Voronoi) ... ok test_voronoi_frames (pysal.lib.cg.tests.test_voronoi.Voronoi) ... ok test_converters (pysal.lib.io.geotable.tests.test_utils.Test_Utils) ... SKIP: skpping converters and metadata inserters test_insert_metadata (pysal.lib.io.geotable.tests.test_utils.Test_Utils) ... SKIP: skpping converters and metadata inserters test_close (pysal.lib.io.iohandlers.tests.test_arcgis_dbf.test_ArcGISDbfIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_arcgis_dbf.test_ArcGISDbfIO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_arcgis_dbf.test_ArcGISDbfIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_arcgis_dbf.test_ArcGISDbfIO) ... ok test_close (pysal.lib.io.iohandlers.tests.test_arcgis_swm.test_ArcGISSwmIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_arcgis_swm.test_ArcGISSwmIO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_arcgis_swm.test_ArcGISSwmIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_arcgis_swm.test_ArcGISSwmIO) ... ok test_close (pysal.lib.io.iohandlers.tests.test_arcgis_txt.test_ArcGISTextIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_arcgis_txt.test_ArcGISTextIO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_arcgis_txt.test_ArcGISTextIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_arcgis_txt.test_ArcGISTextIO) ... ok test_by_col (pysal.lib.io.iohandlers.tests.test_csvWrapper.test_csvWrapper) ... ok test_casting (pysal.lib.io.iohandlers.tests.test_csvWrapper.test_csvWrapper) ... ok test_len (pysal.lib.io.iohandlers.tests.test_csvWrapper.test_csvWrapper) ... ok test_read (pysal.lib.io.iohandlers.tests.test_csvWrapper.test_csvWrapper) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_csvWrapper.test_csvWrapper) ... ok test_slicing (pysal.lib.io.iohandlers.tests.test_csvWrapper.test_csvWrapper) ... ok test_tell (pysal.lib.io.iohandlers.tests.test_csvWrapper.test_csvWrapper) ... ok test_close (pysal.lib.io.iohandlers.tests.test_dat.test_DatIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_dat.test_DatIO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_dat.test_DatIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_dat.test_DatIO) ... ok test_deserialize (pysal.lib.io.iohandlers.tests.test_db.Test_sqlite_reader) ... SKIP: missing dependencies: Geomet (True) & SQLAlchemy (True) test___init__ (pysal.lib.io.iohandlers.tests.test_gal.test_GalIO) ... ok test_close (pysal.lib.io.iohandlers.tests.test_gal.test_GalIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_gal.test_GalIO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_gal.test_GalIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_gal.test_GalIO) ... ok test_close (pysal.lib.io.iohandlers.tests.test_geobugs_txt.test_GeoBUGSTextIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_geobugs_txt.test_GeoBUGSTextIO) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:167: UserWarning: There are 3 disconnected observations Island ids: 6, 8, 11 warnings.warn("There are %d disconnected observations" % ni + ' \n ' ok test_seek (pysal.lib.io.iohandlers.tests.test_geobugs_txt.test_GeoBUGSTextIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_geobugs_txt.test_GeoBUGSTextIO) ... ok test___init__ (pysal.lib.io.iohandlers.tests.test_geoda_txt.test_GeoDaTxtReader) ... ok test___len__ (pysal.lib.io.iohandlers.tests.test_geoda_txt.test_GeoDaTxtReader) ... ok test_close (pysal.lib.io.iohandlers.tests.test_geoda_txt.test_GeoDaTxtReader) ... ok test_close (pysal.lib.io.iohandlers.tests.test_gwt.test_GwtIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_gwt.test_GwtIO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_gwt.test_GwtIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_gwt.test_GwtIO) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/iohandlers/gwt.py:148: RuntimeWarning: DBF relating to GWT was not found, proceeding with unordered string ids. warn("DBF relating to GWT was not found, proceeding with unordered string ids.", RuntimeWarning) ok test_close (pysal.lib.io.iohandlers.tests.test_mat.test_MatIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_mat.test_MatIO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_mat.test_MatIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_mat.test_MatIO) ... ok test_close (pysal.lib.io.iohandlers.tests.test_mtx.test_MtxIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_mtx.test_MtxIO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_mtx.test_MtxIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_mtx.test_MtxIO) ... ok test_cast (pysal.lib.io.iohandlers.tests.test_pyDbfIO.test_DBF) ... ok test_len (pysal.lib.io.iohandlers.tests.test_pyDbfIO.test_DBF) ... ok test_random_access (pysal.lib.io.iohandlers.tests.test_pyDbfIO.test_DBF) ... ok test_read (pysal.lib.io.iohandlers.tests.test_pyDbfIO.test_DBF) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_pyDbfIO.test_DBF) ... ok test_tell (pysal.lib.io.iohandlers.tests.test_pyDbfIO.test_DBF) ... ok test_write (pysal.lib.io.iohandlers.tests.test_pyDbfIO.test_DBF) ... ok test_writeNones (pysal.lib.io.iohandlers.tests.test_pyDbfIO.test_DBF) ... ok test_len (pysal.lib.io.iohandlers.tests.test_pyShpIO.test_PurePyShpWrapper) ... ok test_random_access (pysal.lib.io.iohandlers.tests.test_pyShpIO.test_PurePyShpWrapper) ... ok test_read (pysal.lib.io.iohandlers.tests.test_pyShpIO.test_PurePyShpWrapper) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_pyShpIO.test_PurePyShpWrapper) ... ok test_tell (pysal.lib.io.iohandlers.tests.test_pyShpIO.test_PurePyShpWrapper) ... ok test_write (pysal.lib.io.iohandlers.tests.test_pyShpIO.test_PurePyShpWrapper) ... ok test_close (pysal.lib.io.iohandlers.tests.test_stata_txt.test_StataTextIO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_stata_txt.test_StataTextIO) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:167: UserWarning: There are 7 disconnected observations Island ids: 5, 9, 10, 11, 12, 14, 15 warnings.warn("There are %d disconnected observations" % ni + ' \n ' ok test_seek (pysal.lib.io.iohandlers.tests.test_stata_txt.test_StataTextIO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_stata_txt.test_StataTextIO) ... ok test_close (pysal.lib.io.iohandlers.tests.test_wk1.test_Wk1IO) ... ok test_read (pysal.lib.io.iohandlers.tests.test_wk1.test_Wk1IO) ... ok test_seek (pysal.lib.io.iohandlers.tests.test_wk1.test_Wk1IO) ... ok test_write (pysal.lib.io.iohandlers.tests.test_wk1.test_Wk1IO) ... ok test__read (pysal.lib.io.iohandlers.tests.test_wkt.test_WKTReader) ... ok test_close (pysal.lib.io.iohandlers.tests.test_wkt.test_WKTReader) ... ok test_open (pysal.lib.io.iohandlers.tests.test_wkt.test_WKTReader) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.TestMultiPatch) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.TestMultiPoint) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.TestMultiPointM) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.TestMultiPointZ) ... ok test_none_max (pysal.lib.io.util.tests.test_shapefile.TestNoneMax) ... ok test_none_min (pysal.lib.io.util.tests.test_shapefile.TestNoneMin) ... ok test_pack (pysal.lib.io.util.tests.test_shapefile.TestNullShape) ... ok test_unpack (pysal.lib.io.util.tests.test_shapefile.TestNullShape) ... ok test_pack (pysal.lib.io.util.tests.test_shapefile.TestPoint) ... ok test_unpack (pysal.lib.io.util.tests.test_shapefile.TestPoint) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.TestPointM) ... ok test_pack (pysal.lib.io.util.tests.test_shapefile.TestPointZ) ... ok test_unpack (pysal.lib.io.util.tests.test_shapefile.TestPointZ) ... ok test_pack (pysal.lib.io.util.tests.test_shapefile.TestPolyLine) ... ok test_unpack (pysal.lib.io.util.tests.test_shapefile.TestPolyLine) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.TestPolyLineM) ... ok test_pack (pysal.lib.io.util.tests.test_shapefile.TestPolyLineZ) ... ok test_unpack (pysal.lib.io.util.tests.test_shapefile.TestPolyLineZ) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.TestPolygonM) ... ok test_pack (pysal.lib.io.util.tests.test_shapefile.TestPolygonZ) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.test_shp_file) ... ok test___iter__ (pysal.lib.io.util.tests.test_shapefile.test_shp_file) ... ok test___len__ (pysal.lib.io.util.tests.test_shapefile.test_shp_file) ... ok test_add_shape (pysal.lib.io.util.tests.test_shapefile.test_shp_file) ... ok test_close (pysal.lib.io.util.tests.test_shapefile.test_shp_file) ... ok test_get_shape (pysal.lib.io.util.tests.test_shapefile.test_shp_file) ... ok test_next (pysal.lib.io.util.tests.test_shapefile.test_shp_file) ... ok test_type (pysal.lib.io.util.tests.test_shapefile.test_shp_file) ... ok test___init__ (pysal.lib.io.util.tests.test_shapefile.test_shx_file) ... ok test_add_record (pysal.lib.io.util.tests.test_shapefile.test_shx_file) ... ok test_close (pysal.lib.io.util.tests.test_shapefile.test_shx_file) ... ok test__setW (pysal.lib.io.util.tests.test_weight_converter.test_WeightConverter) ... SKIP: This function is deprecated test_weight_convert (pysal.lib.io.util.tests.test_weight_converter.test_WeightConverter) ... SKIP: This function is deprecated test_write (pysal.lib.io.util.tests.test_weight_converter.test_WeightConverter) ... SKIP: This function is deprecated test_LineString (pysal.lib.io.util.tests.test_wkt.test_WKTParser) ... ok test_Point (pysal.lib.io.util.tests.test_wkt.test_WKTParser) ... ok test_Polygon (pysal.lib.io.util.tests.test_wkt.test_WKTParser) ... ok test_fromWKT (pysal.lib.io.util.tests.test_wkt.test_WKTParser) ... ok Test if the Metaclass is initializing and providing ... ok test_to_df (pysal.lib.io.tests.test_Tables.Test_Table) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/io/tables.py:209: UserWarning: Encountered the following error in attempting to read the shapefile /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income/usjoin.shp. Proceeding with read, but the error will be reproduced below: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/examples/us_income/usjoin.shp' warn('Encountered the following error in attempting to read' ok Unit test for w_clip ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 2 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:167: UserWarning: There are 2 disconnected observations Island ids: 1, 5 warnings.warn("There are %d disconnected observations" % ni + ' \n ' ok Unit test ... ok Unit test ... ok Unit test ... ok Unit test ... ok Unit test ... ok test_ContiguityWeightsLists (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_QUEEN (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_ROOK (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_nested_polygons (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_shapely (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_true_rook (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_true_rook2 (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_true_rook3 (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_true_rook4 (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_w_type (pysal.lib.weights.tests.test__contW_lists.TestContiguityWeights) ... ok test_apply (pysal.lib.weights.tests.test_adjlist.Test_Adjlist) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests/test_adjlist.py:49: FutureWarning: outer method for ufunc is not implemented on pandas objects. Returning an ndarray, but in the future this will raise a 'NotImplementedError'. Consider explicitly converting the Series to an array with '.array' first. allpairs = np.subtract.outer(df[col], df[col]) ok test_filter (pysal.lib.weights.tests.test_adjlist.Test_Adjlist) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:233: UserWarning: There is one disconnected observation (no neighbors). Island id: 2 return cls(neighbors=neighbors, weights=weights) FAIL test_map (pysal.lib.weights.tests.test_adjlist.Test_Adjlist) ... ok test_mvapply (pysal.lib.weights.tests.test_adjlist.Test_Adjlist) ... ok test_round_trip (pysal.lib.weights.tests.test_adjlist.Test_Adjlist) ... ok test_from_array (pysal.lib.weights.tests.test_contiguity.Test_Queen) ... ok test_from_dataframe (pysal.lib.weights.tests.test_contiguity.Test_Queen) ... ok test_from_iterable (pysal.lib.weights.tests.test_contiguity.Test_Queen) ... ok test_from_shapefile (pysal.lib.weights.tests.test_contiguity.Test_Queen) ... ok test_init (pysal.lib.weights.tests.test_contiguity.Test_Queen) ... ok test_linestrings (pysal.lib.weights.tests.test_contiguity.Test_Queen) ... ok test_from_array (pysal.lib.weights.tests.test_contiguity.Test_Rook) ... ok test_from_dataframe (pysal.lib.weights.tests.test_contiguity.Test_Rook) ... ok test_from_iterable (pysal.lib.weights.tests.test_contiguity.Test_Rook) ... ok test_from_shapefile (pysal.lib.weights.tests.test_contiguity.Test_Rook) ... ok test_init (pysal.lib.weights.tests.test_contiguity.Test_Rook) ... ok test_voronoiW (pysal.lib.weights.tests.test_contiguity.Test_Voronoi) ... ok test_arcdist (pysal.lib.weights.tests.test_distance.Test_DistanceBand) ... ok test_dense (pysal.lib.weights.tests.test_distance.Test_DistanceBand) ... ok test_from_array (pysal.lib.weights.tests.test_distance.Test_DistanceBand) ... ok test_from_dataframe (pysal.lib.weights.tests.test_distance.Test_DistanceBand) ... ok test_from_shapefile (pysal.lib.weights.tests.test_distance.Test_DistanceBand) ... ok test_init (pysal.lib.weights.tests.test_distance.Test_DistanceBand) ... ok see issue #126 ... ok test_named (pysal.lib.weights.tests.test_distance.Test_DistanceBand) ... ok test_arcdata (pysal.lib.weights.tests.test_distance.Test_KNN) ... ok test_from_array (pysal.lib.weights.tests.test_distance.Test_KNN) ... ok test_from_dataframe (pysal.lib.weights.tests.test_distance.Test_KNN) ... ok test_from_shapefile (pysal.lib.weights.tests.test_distance.Test_KNN) ... ok test_init (pysal.lib.weights.tests.test_distance.Test_KNN) ... ok test_reweight (pysal.lib.weights.tests.test_distance.Test_KNN) ... ok test_adaptive_bandwidth (pysal.lib.weights.tests.test_distance.Test_Kernel) ... ok test_arcdistance (pysal.lib.weights.tests.test_distance.Test_Kernel) ... ok test_fixed_bandwidth (pysal.lib.weights.tests.test_distance.Test_Kernel) ... ok test_from_array (pysal.lib.weights.tests.test_distance.Test_Kernel) ... ok test_from_dataframe (pysal.lib.weights.tests.test_distance.Test_Kernel) ... ok test_from_shapefile (pysal.lib.weights.tests.test_distance.Test_Kernel) ... ok test_init (pysal.lib.weights.tests.test_distance.Test_Kernel) ... ok test_round_trip (pysal.lib.weights.tests.test_nx.Test_NetworkXConverter) ... SKIP: Missing networkx test_lag_categorical (pysal.lib.weights.tests.test_spatial_lag.Test_spatial_lag) ... ok test_lag_spatial (pysal.lib.weights.tests.test_spatial_lag.Test_spatial_lag) ... ok test_mat2L (pysal.lib.weights.tests.test_spintW.TestNetW) ... ok test_netC (pysal.lib.weights.tests.test_spintW.TestNetW) ... ok test_netD (pysal.lib.weights.tests.test_spintW.TestNetW) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 4 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_netO (pysal.lib.weights.tests.test_spintW.TestNetW) ... ok test_netOD (pysal.lib.weights.tests.test_spintW.TestNetW) ... ok test_net_all (pysal.lib.weights.tests.test_spintW.TestNetW) ... ok test_ODW_full (pysal.lib.weights.tests.test_spintW.TestODWeights) ... ok test_vecW (pysal.lib.weights.tests.test_spintW.TestVecW) ... ok test_build_lattice_shapefile (pysal.lib.weights.tests.test_user.Testuser) ... ok test_min_threshold_dist_from_shapefile (pysal.lib.weights.tests.test_user.Testuser) ... ok test_voronoiW (pysal.lib.weights.tests.test_user.Testuser) ... ok test_WSP2W (pysal.lib.weights.tests.test_util.Testutil) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/contiguity.py:34: UserWarning: There is one disconnected observation (no neighbors). Island id: 163 W.__init__(self, neighbors, ids=ids, **kw) ok test_attach_islands (pysal.lib.weights.tests.test_util.Testutil) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 48 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_block_weights (pysal.lib.weights.tests.test_util.Testutil) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 3 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_comb (pysal.lib.weights.tests.test_util.Testutil) ... ok test_full (pysal.lib.weights.tests.test_util.Testutil) ... ok test_full2W (pysal.lib.weights.tests.test_util.Testutil) ... ok test_fuzzy_contiguity (pysal.lib.weights.tests.test_util.Testutil) ... ok test_get_ids_gdf (pysal.lib.weights.tests.test_util.Testutil) ... ok test_get_ids_shp (pysal.lib.weights.tests.test_util.Testutil) ... ok test_get_points_array_from_shapefile (pysal.lib.weights.tests.test_util.Testutil) ... ok test_higher_order (pysal.lib.weights.tests.test_util.Testutil) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 2 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_higher_order_classes (pysal.lib.weights.tests.test_util.Testutil) ... ok test_insert_diagonal (pysal.lib.weights.tests.test_util.Testutil) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/util.py:811: UserWarning: This function is deprecated. Use fill_diagonal instead. warn('This function is deprecated. Use fill_diagonal instead.') ok test_lat2SW (pysal.lib.weights.tests.test_util.Testutil) ... ok test_lat2W (pysal.lib.weights.tests.test_util.Testutil) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/contiguity.py:34: UserWarning: There is one disconnected observation (no neighbors). Island id: 163 W.__init__(self, neighbors, ids=ids, **kw) ok test_min_threshold_distance (pysal.lib.weights.tests.test_util.Testutil) ... ok test_nonplanar_neighbors (pysal.lib.weights.tests.test_util.Testutil) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:167: UserWarning: There are 29 disconnected observations Island ids: 0, 4, 23, 27, 80, 94, 101, 107, 109, 119, 122, 139, 169, 175, 223, 239, 247, 253, 254, 255, 256, 261, 276, 291, 294, 303, 321, 357, 374 warnings.warn("There are %d disconnected observations" % ni + ' \n ' ok test_order (pysal.lib.weights.tests.test_util.Testutil) ... ok test_remap_ids (pysal.lib.weights.tests.test_util.Testutil) ... ok test_shimbel (pysal.lib.weights.tests.test_util.Testutil) ... ok test_W (pysal.lib.weights.tests.test_weights.TestW) ... ok test___getitem__ (pysal.lib.weights.tests.test_weights.TestW) ... ok test___init__ (pysal.lib.weights.tests.test_weights.TestW) ... ok test___iter__ (pysal.lib.weights.tests.test_weights.TestW) ... ok test_asymmetries (pysal.lib.weights.tests.test_weights.TestW) ... ok test_asymmetry (pysal.lib.weights.tests.test_weights.TestW) ... ok test_cardinalities (pysal.lib.weights.tests.test_weights.TestW) ... ok test_connected_components (pysal.lib.weights.tests.test_weights.TestW) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 2 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_diagW2 (pysal.lib.weights.tests.test_weights.TestW) ... ok test_diagWtW (pysal.lib.weights.tests.test_weights.TestW) ... ok test_diagWtW_WW (pysal.lib.weights.tests.test_weights.TestW) ... ok test_full (pysal.lib.weights.tests.test_weights.TestW) ... ok test_get_transform (pysal.lib.weights.tests.test_weights.TestW) ... ok test_higher_order (pysal.lib.weights.tests.test_weights.TestW) ... ok test_histogram (pysal.lib.weights.tests.test_weights.TestW) ... ok test_id2i (pysal.lib.weights.tests.test_weights.TestW) ... ok test_id_order_set (pysal.lib.weights.tests.test_weights.TestW) ... ok test_islands (pysal.lib.weights.tests.test_weights.TestW) ... ok test_max_neighbors (pysal.lib.weights.tests.test_weights.TestW) ... ok test_mean_neighbors (pysal.lib.weights.tests.test_weights.TestW) ... ok test_min_neighbors (pysal.lib.weights.tests.test_weights.TestW) ... ok test_n (pysal.lib.weights.tests.test_weights.TestW) ... ok test_neighbor_offsets (pysal.lib.weights.tests.test_weights.TestW) ... ok test_nonzero (pysal.lib.weights.tests.test_weights.TestW) ... ok test_order (pysal.lib.weights.tests.test_weights.TestW) ... ok test_pct_nonzero (pysal.lib.weights.tests.test_weights.TestW) ... ok test_s0 (pysal.lib.weights.tests.test_weights.TestW) ... ok test_s1 (pysal.lib.weights.tests.test_weights.TestW) ... ok test_s2 (pysal.lib.weights.tests.test_weights.TestW) ... ok test_s2array (pysal.lib.weights.tests.test_weights.TestW) ... ok test_sd (pysal.lib.weights.tests.test_weights.TestW) ... ok test_set_transform (pysal.lib.weights.tests.test_weights.TestW) ... ok test_shimbel (pysal.lib.weights.tests.test_weights.TestW) ... ok test_sparse (pysal.lib.weights.tests.test_weights.TestW) ... ok test_symmetrize (pysal.lib.weights.tests.test_weights.TestW) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:1088: UserWarning: There is one disconnected observation (no neighbors). Island id: 163 out_W = W(neighbors, weights) ok test_trcW2 (pysal.lib.weights.tests.test_weights.TestW) ... ok test_trcWtW (pysal.lib.weights.tests.test_weights.TestW) ... ok test_trcWtW_WW (pysal.lib.weights.tests.test_weights.TestW) ... ok test_WSP (pysal.lib.weights.tests.test_weights.TestWSP) ... ok test_diagWtW_WW (pysal.lib.weights.tests.test_weights.TestWSP) ... ok test_s0 (pysal.lib.weights.tests.test_weights.TestWSP) ... ok test_trcWtW_WW (pysal.lib.weights.tests.test_weights.TestWSP) ... ok test_W (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test___getitem__ (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test___init__ (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test___iter__ (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_asymmetries (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_asymmetry (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_cardinalities (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_diagW2 (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_diagWtW (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_diagWtW_WW (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_full (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_get_transform (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_higher_order (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 2 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_histogram (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_id2i (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_id_order_set (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_islands (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_max_neighbors (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_mean_neighbors (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_min_neighbors (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_n (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_nonzero (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_order (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_pct_nonzero (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_s0 (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_s1 (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_s2 (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_s2array (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_sd (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_set_transform (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_shimbel (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_sparse (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_trcW2 (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_trcWtW (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_trcWtW_WW (pysal.lib.weights.tests.test_weights.Test_WSP_Back_To_W) ... ok test_SWMIO (pysal.lib.weights.tests.test_weights_IO.TestWIO) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/weights.py:170: UserWarning: The weights matrix is not fully connected. There are 4 components warnings.warn("The weights matrix is not fully connected. There are %d components" % self.n_components) ok test_contents (pysal.lib.test_NameSpace.TestNameSpace) ... SKIP: Skipping unittest for namespace test_BS_F (pysal.model.mgwr.tests.test_gwr.TestGWRBinomial) ... ok test_BS_NN (pysal.model.mgwr.tests.test_gwr.TestGWRBinomial) ... ok test_GS_F (pysal.model.mgwr.tests.test_gwr.TestGWRBinomial) ... ok test_GS_NN (pysal.model.mgwr.tests.test_gwr.TestGWRBinomial) ... ok test_BS_F (pysal.model.mgwr.tests.test_gwr.TestGWRGaussian) ... ok test_BS_NN (pysal.model.mgwr.tests.test_gwr.TestGWRGaussian) ... ok test_BS_NN_longlat (pysal.model.mgwr.tests.test_gwr.TestGWRGaussian) ... ok test_GS_F (pysal.model.mgwr.tests.test_gwr.TestGWRGaussian) ... ok test_GS_NN (pysal.model.mgwr.tests.test_gwr.TestGWRGaussian) ... ok test_MGWR (pysal.model.mgwr.tests.test_gwr.TestGWRGaussian) ... ok test_Prediction (pysal.model.mgwr.tests.test_gwr.TestGWRGaussian) ... ok test_BS_F (pysal.model.mgwr.tests.test_gwr.TestGWRPoisson) ... ok test_BS_NN (pysal.model.mgwr.tests.test_gwr.TestGWRPoisson) ... ok test_BS_NN_Offset (pysal.model.mgwr.tests.test_gwr.TestGWRPoisson) ... ok test_GS_F (pysal.model.mgwr.tests.test_gwr.TestGWRPoisson) ... ok test_GS_NN (pysal.model.mgwr.tests.test_gwr.TestGWRPoisson) ... ok test_adapt_bisqaure (pysal.model.mgwr.tests.test_kernels.TestKernels) ... ok test_adapt_exp (pysal.model.mgwr.tests.test_kernels.TestKernels) ... ok test_adapt_gauss (pysal.model.mgwr.tests.test_kernels.TestKernels) ... ok test_fix_biqsquare (pysal.model.mgwr.tests.test_kernels.TestKernels) ... ok test_fix_exp (pysal.model.mgwr.tests.test_kernels.TestKernels) ... ok test_fix_gauss (pysal.model.mgwr.tests.test_kernels.TestKernels) ... ok test_MGWR_AICc (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_golden_adapt_AIC (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_golden_adapt_AICc (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_golden_adapt_BIC (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_golden_adapt_CV (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_golden_fixed_AIC (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_golden_fixed_AICc (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_golden_fixed_BIC (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_golden_fixed_CV (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_interval_adapt_AIC (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_interval_adapt_AICc (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_interval_adapt_BIC (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_interval_adapt_CV (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_interval_fixed_AIC (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_interval_fixed_AICc (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_interval_fixed_BIC (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok test_interval_fixed_CV (pysal.model.mgwr.tests.test_sel_bw.TestSelBW) ... ok testIWLS (pysal.model.spglm.tests.test_glm.TestBinomial) ... ok testIWLS (pysal.model.spglm.tests.test_glm.TestGaussian) ... ok testIWLS (pysal.model.spglm.tests.test_glm.TestPoisson) ... ok testQuasi (pysal.model.spglm.tests.test_glm.TestPoisson) ... ok test_PoissonGLM (pysal.model.spint.tests.test_count_model.TestCountModel) ... ok test_Dispersion (pysal.model.spint.tests.test_dispersion.TestDispersion) ... ok test_Attraction (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_BaseGravity_exp (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_BaseGravity_pow (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_Doubly (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_Gravity (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_Production (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_QuasiPoisson (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_local_Attraction (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_local_Gravity (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_local_Production (pysal.model.spint.tests.test_gravity.TestGravity) ... ok test_dest_focused_A (pysal.model.spint.tests.test_vec_SA.TestVecMoran) ... ok test_dest_focused_B (pysal.model.spint.tests.test_vec_SA.TestVecMoran) ... ok test_origin_focused_A (pysal.model.spint.tests.test_vec_SA.TestVecMoran) ... ok test_origin_focused_B (pysal.model.spint.tests.test_vec_SA.TestVecMoran) ... ok test_akaike (pysal.model.spreg.tests.test_diagnostics.TestAkaike) ... ok test_ar2 (pysal.model.spreg.tests.test_diagnostics.TestAr2) ... ok test_breusch_pagan (pysal.model.spreg.tests.test_diagnostics.TestBreuschPagan) ... ok test_condition_index (pysal.model.spreg.tests.test_diagnostics.TestConditionIndex) ... ok test_constant_check (pysal.model.spreg.tests.test_diagnostics.TestConstantCheck) ... ok test_f_stat (pysal.model.spreg.tests.test_diagnostics.TestFStat) ... ok test_jarque_bera (pysal.model.spreg.tests.test_diagnostics.TestJarqueBera) ... ok test_koenker_bassett (pysal.model.spreg.tests.test_diagnostics.TestKoenkerBassett) ... ok test_log_likelihood (pysal.model.spreg.tests.test_diagnostics.TestLogLikelihood) ... ok test_r2 (pysal.model.spreg.tests.test_diagnostics.TestR2) ... ok test_schwarz (pysal.model.spreg.tests.test_diagnostics.TestSchwarz) ... ok test_se_betas (pysal.model.spreg.tests.test_diagnostics.TestSeBetas) ... ok test_t_stat (pysal.model.spreg.tests.test_diagnostics.TestTStat) ... ok test_vif (pysal.model.spreg.tests.test_diagnostics.TestVif) ... ok test_white (pysal.model.spreg.tests.test_diagnostics.TestWhite) ... ok test_gen_ak (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ... ERROR test_gen_mi (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ... ERROR test_gen_p (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ... ERROR test_sp_ak (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ... ERROR test_sp_mi (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ... ERROR test_sp_p (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ... ERROR test_lm_err (pysal.model.spreg.tests.test_diagnostics_sp.TestLMtests) ... ok test_lm_lag (pysal.model.spreg.tests.test_diagnostics_sp.TestLMtests) ... ok test_lm_sarma (pysal.model.spreg.tests.test_diagnostics_sp.TestLMtests) ... ok test_rlm_err (pysal.model.spreg.tests.test_diagnostics_sp.TestLMtests) ... ok test_rlm_lag (pysal.model.spreg.tests.test_diagnostics_sp.TestLMtests) ... ok test_get_e_i (pysal.model.spreg.tests.test_diagnostics_sp.TestMoranRes) ... ok test_get_m_i (pysal.model.spreg.tests.test_diagnostics_sp.TestMoranRes) ... ok test_get_v_i (pysal.model.spreg.tests.test_diagnostics_sp.TestMoranRes) ... ok test_get_z_i (pysal.model.spreg.tests.test_diagnostics_sp.TestMoranRes) ... ok test_j (pysal.model.spreg.tests.test_diagnostics_sp.TestSpDcache) ... ok test_t (pysal.model.spreg.tests.test_diagnostics_sp.TestSpDcache) ... ok test_trA (pysal.model.spreg.tests.test_diagnostics_sp.TestSpDcache) ... ok test_utwuDs (pysal.model.spreg.tests.test_diagnostics_sp.TestSpDcache) ... ok test_utwyDs (pysal.model.spreg.tests.test_diagnostics_sp.TestSpDcache) ... ok test_wu (pysal.model.spreg.tests.test_diagnostics_sp.TestSpDcache) ... ok Failure: TypeError (No loop matching the specified signature and casting was found for ufunc add) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp.TestBaseGMCombo) ... ok test_model (pysal.model.spreg.tests.test_error_sp.TestBaseGMEndogError) ... ok test_model (pysal.model.spreg.tests.test_error_sp.TestBaseGMError) ... ok test_model (pysal.model.spreg.tests.test_error_sp.TestGMCombo) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp.TestGMEndogError) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp.TestGMError) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_het.TestBaseGMComboHet) ... ok test_model (pysal.model.spreg.tests.test_error_sp_het.TestBaseGMEndogErrorHet) ... ok test_model (pysal.model.spreg.tests.test_error_sp_het.TestBaseGMErrorHet) ... ok test_model (pysal.model.spreg.tests.test_error_sp_het.TestGMComboHet) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_het.TestGMEndogErrorHet) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_het.TestGMErrorHet) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ... ERROR test_model_combo (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ... ERROR test_model_combo_regi_error (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ... ERROR test_model_endog (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ... ERROR test_model_endog_regi_error (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ... ERROR test_model_regi_error (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestBaseGMComboHet) ... ok test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestBaseGMEndogErrorHet) ... ok test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestBaseGMErrorHet) ... ok test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestGMComboHet) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestGMEndogErrorHet) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestGMErrorHet) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom.BaseGM_Combo_Hom_Tester) ... ok test_model (pysal.model.spreg.tests.test_error_sp_hom.BaseGM_Endog_Error_Hom_Tester) ... ok test_model (pysal.model.spreg.tests.test_error_sp_hom.BaseGM_Error_Hom_Tester) ... ok test_model (pysal.model.spreg.tests.test_error_sp_hom.GM_Combo_Hom_Tester) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom.GM_Combo_Hom_Tester) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom.GM_Endog_Error_Hom_Tester) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom.GM_Error_Hom_Tester) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ... ERROR test_model_combo (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ... ERROR test_model_combo_regi_error (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ... ERROR test_model_endog (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ... ERROR test_model_endog_regi_error (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ... ERROR test_model_regi_error (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.BaseGM_Combo_Hom_Tester) ... ok test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.BaseGM_Endog_Error_Hom_Tester) ... ok test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.BaseGM_Error_Hom_Tester) ... ok test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.GM_Combo_Hom_Tester) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.GM_Combo_Hom_Tester) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.GM_Endog_Error_Hom_Tester) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.GM_Error_Hom_Tester) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ... ERROR test_model_combo (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ... ERROR test_model_combo_regi_error (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ... ERROR test_model_endog (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ... ERROR test_model_endog_regi_error (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestBaseGMCombo) ... ok test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestBaseGMEndogError) ... ok test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestBaseGMError) ... ok test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestGMCombo) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestGMEndogError) ... ERROR test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestGMError) ... ERROR test_LU (pysal.model.spreg.tests.test_ml_error.TestMLError) ... ERROR test_dense (pysal.model.spreg.tests.test_ml_error.TestMLError) ... ERROR test_ord (pysal.model.spreg.tests.test_ml_error.TestMLError) ... ERROR test_model1 (pysal.model.spreg.tests.test_ml_error_regimes.TestMLError) ... ERROR test_model2 (pysal.model.spreg.tests.test_ml_error_regimes.TestMLError) ... ERROR test_LU (pysal.model.spreg.tests.test_ml_lag.TestMLError) ... ERROR test_dense (pysal.model.spreg.tests.test_ml_lag.TestMLError) ... ERROR test_ord (pysal.model.spreg.tests.test_ml_lag.TestMLError) ... ERROR test_model1 (pysal.model.spreg.tests.test_ml_lag_regimes.TestMLError) ... ERROR test_model2 (pysal.model.spreg.tests.test_ml_lag_regimes.TestMLError) ... ERROR test_OLS (pysal.model.spreg.tests.test_ols.TestBaseOLS) ... ok test_ols (pysal.model.spreg.tests.test_ols.TestBaseOLS) ... ok test_ols_white1 (pysal.model.spreg.tests.test_ols.TestBaseOLS) ... ok test_ols_white2 (pysal.model.spreg.tests.test_ols.TestBaseOLS) ... ok test_OLS (pysal.model.spreg.tests.test_ols_regimes.TestOLS_regimes) ... ok test_OLS_fixed (pysal.model.spreg.tests.test_ols_regimes.TestOLS_regimes) ... ok test_OLS (pysal.model.spreg.tests.test_ols_sparse.TestBaseOLS) ... ok test_ols (pysal.model.spreg.tests.test_ols_sparse.TestBaseOLS) ... ok test_model (pysal.model.spreg.tests.test_probit.TestBaseProbit) ... ok test_model (pysal.model.spreg.tests.test_probit.TestProbit) ... ERROR test_broadcast (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_fill_diagonal (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_hstack (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_inv (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_isfinite (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_logdet (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_max (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_min (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_multiply (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_spdot (pysal.model.spreg.tests.test_sputils.Test_Sparse_Utils) ... ok test_3SLS (pysal.model.spreg.tests.test_sur.Test_SUR) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:320: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. bigE = np.hstack((bigy[r] - spdot(bigX[r],beta[r])) for r in range(n_eq)) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:294: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. xsigy = np.vstack((sigiXy[t] for t in range(n_eq))) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:295: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. xsigx = np.vstack(((np.hstack(sigiXX[(r,t)] for t in range(n_eq))) for r in range(n_eq))) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:202: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. mat = np.vstack((dicts[t] for t in range(n_dicts))) ok test_3SLS_uneqK (pysal.model.spreg.tests.test_sur.Test_SUR) ... ok test_SUR (pysal.model.spreg.tests.test_sur.Test_SUR) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:341: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. bigYP = np.hstack(spdot(bigX[r],beta[r]) for r in range(n_eq)) ok test_SUR_3eq (pysal.model.spreg.tests.test_sur.Test_SUR) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_sur.py:189: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. Y = np.hstack((bigy[r]) for r in range(n_eq)) ok test_SUR_iter (pysal.model.spreg.tests.test_sur.Test_SUR) ... ok test_sur_regi (pysal.model.spreg.tests.test_sur.Test_SUR) ... ok test_error (pysal.model.spreg.tests.test_sur_error.Test_SUR_error) ... ok test_error_3eq (pysal.model.spreg.tests.test_sur_error.Test_SUR_error) ... ok test_error_vm (pysal.model.spreg.tests.test_sur_error.Test_SUR_error) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:202: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. mat = np.vstack((dicts[t] for t in range(n_dicts))) ok test_error_3eq_gm (pysal.model.spreg.tests.test_sur_error.Test_SUR_error_gm) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:320: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. bigE = np.hstack((bigy[r] - spdot(bigX[r],beta[r])) for r in range(n_eq)) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:294: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. xsigy = np.vstack((sigiXy[t] for t in range(n_eq))) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:295: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. xsigx = np.vstack(((np.hstack(sigiXX[(r,t)] for t in range(n_eq))) for r in range(n_eq))) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:320: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. bigE = np.hstack((bigy[r] - spdot(bigX[r],beta[r])) for r in range(n_eq)) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:202: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. mat = np.vstack((dicts[t] for t in range(n_dicts))) ok test_error_gm (pysal.model.spreg.tests.test_sur_error.Test_SUR_error_gm) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:294: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. xsigy = np.vstack((sigiXy[t] for t in range(n_eq))) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:295: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. xsigx = np.vstack(((np.hstack(sigiXX[(r,t)] for t in range(n_eq))) for r in range(n_eq))) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:320: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. bigE = np.hstack((bigy[r] - spdot(bigX[r],beta[r])) for r in range(n_eq)) /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/sur_utils.py:202: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. mat = np.vstack((dicts[t] for t in range(n_dicts))) ok test_3SLS (pysal.model.spreg.tests.test_sur_lag.Test_SURlagIV) ... ok test_3SLS_3eq (pysal.model.spreg.tests.test_sur_lag.Test_SURlagIV) ... ok test_3SLS_3eq_2or (pysal.model.spreg.tests.test_sur_lag.Test_SURlagIV) ... ok test_3SLS_3eq_end (pysal.model.spreg.tests.test_sur_lag.Test_SURlagIV) ... ok test_basic (pysal.model.spreg.tests.test_twosls.TestBaseTSLS) ... ok test_hac (pysal.model.spreg.tests.test_twosls.TestBaseTSLS) ... ok test_n_k (pysal.model.spreg.tests.test_twosls.TestBaseTSLS) ... ok test_white (pysal.model.spreg.tests.test_twosls.TestBaseTSLS) ... ok test_basic (pysal.model.spreg.tests.test_twosls.TestTSLS) ... ERROR test_hac (pysal.model.spreg.tests.test_twosls.TestTSLS) ... ERROR test_n_k (pysal.model.spreg.tests.test_twosls.TestTSLS) ... ERROR test_names (pysal.model.spreg.tests.test_twosls.TestTSLS) ... ERROR test_spatial (pysal.model.spreg.tests.test_twosls.TestTSLS) ... ERROR test_white (pysal.model.spreg.tests.test_twosls.TestTSLS) ... ERROR test_basic (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ... ERROR test_n_k (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ... ERROR test_names (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ... ERROR test_regi_err (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ... ERROR test_spatial (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ... ERROR test___init__ (pysal.model.spreg.tests.test_twosls_sp.TestBaseGMLag) ... ok test_init_discbd (pysal.model.spreg.tests.test_twosls_sp.TestBaseGMLag) ... ok test_init_hac_ (pysal.model.spreg.tests.test_twosls_sp.TestBaseGMLag) ... ok test_init_white_ (pysal.model.spreg.tests.test_twosls_sp.TestBaseGMLag) ... ok test_lag_q (pysal.model.spreg.tests.test_twosls_sp.TestBaseGMLag) ... ok test_n_k (pysal.model.spreg.tests.test_twosls_sp.TestBaseGMLag) ... ok test___init__ (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ... ERROR test_init_discbd (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ... ERROR test_init_hac_ (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ... ERROR test_init_white_ (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ... ERROR test_lag_q (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ... ERROR test_n_k (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ... ERROR test_names (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ... ERROR test_spatial (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ... ERROR test___init__ (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ... ERROR test_all_regi (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ... ERROR test_all_regi_sig2 (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ... ERROR test_fixed_const (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ... ERROR test_init_discbd (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ... ERROR test_lag_q (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ... ERROR test_names (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ... ERROR test___init__ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestBaseGMLag) ... ok test_init_discbd (pysal.model.spreg.tests.test_twosls_sp_sparse.TestBaseGMLag) ... ok test_init_hac_ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestBaseGMLag) ... ok test_init_white_ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestBaseGMLag) ... ok test_lag_q (pysal.model.spreg.tests.test_twosls_sp_sparse.TestBaseGMLag) ... ok test_n_k (pysal.model.spreg.tests.test_twosls_sp_sparse.TestBaseGMLag) ... ok test___init__ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ... ERROR test_init_discbd (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ... ERROR test_init_hac_ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ... ERROR test_init_white_ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ... ERROR test_lag_q (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ... ERROR test_n_k (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ... ERROR test_names (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ... ERROR test_spatial (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ... ERROR test_basic (pysal.model.spreg.tests.test_twosls_sparse.TestBaseTSLS) ... ok test_hac (pysal.model.spreg.tests.test_twosls_sparse.TestBaseTSLS) ... ok test_n_k (pysal.model.spreg.tests.test_twosls_sparse.TestBaseTSLS) ... ok test_white (pysal.model.spreg.tests.test_twosls_sparse.TestBaseTSLS) ... ok test_basic (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ... ERROR test_hac (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ... ERROR test_n_k (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ... ERROR test_names (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ... ERROR test_spatial (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ... ERROR test_white (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ... ERROR test_argument_parsing (pysal.model.spvcm.both_levels.tests.test_generic.Test_Generic) ... SKIP test_covariance_assignment (pysal.model.spvcm.both_levels.tests.test_generic.Test_Generic) ... SKIP test_membership_delta_mismatch (pysal.model.spvcm.both_levels.tests.test_generic.Test_Generic) ... ok test_missing_membership (pysal.model.spvcm.both_levels.tests.test_generic.Test_Generic) ... ok test_mvcm (pysal.model.spvcm.both_levels.tests.test_generic.Test_Generic) ... SKIP test_trace (pysal.model.spvcm.both_levels.tests.test_generic.Test_Generic) ... ok test_weights_mismatch (pysal.model.spvcm.both_levels.tests.test_generic.Test_Generic) ... ok test_argument_parsing (pysal.model.spvcm.both_levels.tests.test_mvcm.Test_MVCM) ... SKIP test_covariance_assignment (pysal.model.spvcm.both_levels.tests.test_mvcm.Test_MVCM) ... SKIP test_trace (pysal.model.spvcm.both_levels.tests.test_mvcm.Test_MVCM) ... ok test_argument_parsing (pysal.model.spvcm.both_levels.tests.test_sese.Test_SESE) ... SKIP test_covariance_assignment (pysal.model.spvcm.both_levels.tests.test_sese.Test_SESE) ... SKIP test_trace (pysal.model.spvcm.both_levels.tests.test_sese.Test_SESE) ... ok test_argument_parsing (pysal.model.spvcm.both_levels.tests.test_sesma.Test_SESMA) ... SKIP test_covariance_assignment (pysal.model.spvcm.both_levels.tests.test_sesma.Test_SESMA) ... SKIP test_trace (pysal.model.spvcm.both_levels.tests.test_sesma.Test_SESMA) ... ok test_argument_parsing (pysal.model.spvcm.both_levels.tests.test_smase.Test_SMASE) ... SKIP test_covariance_assignment (pysal.model.spvcm.both_levels.tests.test_smase.Test_SMASE) ... SKIP test_trace (pysal.model.spvcm.both_levels.tests.test_smase.Test_SMASE) ... ok test_argument_parsing (pysal.model.spvcm.both_levels.tests.test_smasma.Test_SMASMA) ... SKIP test_covariance_assignment (pysal.model.spvcm.both_levels.tests.test_smasma.Test_SMASMA) ... SKIP test_trace (pysal.model.spvcm.both_levels.tests.test_smasma.Test_SMASMA) ... ok test_argument_parsing (pysal.model.spvcm.lower_level.tests.test_lower_se.Test_Lower_SE) ... SKIP test_covariance_assignment (pysal.model.spvcm.lower_level.tests.test_lower_se.Test_Lower_SE) ... SKIP test_trace (pysal.model.spvcm.lower_level.tests.test_lower_se.Test_Lower_SE) ... ok test_argument_parsing (pysal.model.spvcm.lower_level.tests.test_lower_sma.Test_Lower_SMA) ... SKIP test_covariance_assignment (pysal.model.spvcm.lower_level.tests.test_lower_sma.Test_Lower_SMA) ... SKIP test_trace (pysal.model.spvcm.lower_level.tests.test_lower_sma.Test_Lower_SMA) ... ok test_argument_parsing (pysal.model.spvcm.upper_level.tests.test_upper_se.Test_Upper_SE) ... SKIP test_covariance_assignment (pysal.model.spvcm.upper_level.tests.test_upper_se.Test_Upper_SE) ... SKIP test_trace (pysal.model.spvcm.upper_level.tests.test_upper_se.Test_Upper_SE) ... ok test_argument_parsing (pysal.model.spvcm.upper_level.tests.test_upper_sma.Test_Upper_SMA) ... SKIP test_covariance_assignment (pysal.model.spvcm.upper_level.tests.test_upper_sma.Test_Upper_SMA) ... SKIP test_trace (pysal.model.spvcm.upper_level.tests.test_upper_sma.Test_Upper_SMA) ... ok test_values (pysal.model.spvcm.tests.test_diagnostics.Test_Effective_Size) ... /usr/lib/python3/dist-packages/statsmodels/tsa/ar_model.py:691: FutureWarning: statsmodels.tsa.AR has been deprecated in favor of statsmodels.tsa.AutoReg and statsmodels.tsa.SARIMAX. AutoReg adds the ability to specify exogenous variables, include time trends, and add seasonal dummies. The AutoReg API differs from AR since the model is treated as immutable, and so the entire specification including the lag length must be specified when creating the model. This change is too substantial to incorporate into the existing AR api. The function ar_select_order performs lag length selection for AutoReg models. AutoReg only estimates parameters using conditional MLE (OLS). Use SARIMAX to estimate ARX and related models using full MLE via the Kalman Filter. To silence this warning and continue using AR until it is removed, use: import warnings warnings.filterwarnings('ignore', 'statsmodels.tsa.ar_model.AR', FutureWarning) warnings.warn(AR_DEPRECATION_WARN, FutureWarning) ok test_values (pysal.model.spvcm.tests.test_diagnostics.Test_Gekewe) ... ok test_values (pysal.model.spvcm.tests.test_diagnostics.Test_HPD_Interval) ... ok test_method_values (pysal.model.spvcm.tests.test_diagnostics.Test_MCMCSE) ... /<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spvcm/diagnostics.py:633: FutureWarning: Currently, 'apply' passes the values as ndarrays to the applied function. In the future, this will change to passing it as Series objects. You need to specify 'raw=True' to keep the current behaviour, and you can pass 'raw=False' to silence this warning y = _pd.Series(x).rolling(chunk_size).apply(lambda vec: _np.mean(transform(vec))) ok test_varying_scale (pysal.model.spvcm.tests.test_diagnostics.Test_MCMCSE) ... ok test_coef_recovery (pysal.model.spvcm.tests.test_diagnostics.Test_PSRF) ... ok test_options (pysal.model.spvcm.tests.test_diagnostics.Test_PSRF) ... ok test_from_csv (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_from_df (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_from_pymc3 (pysal.model.spvcm.tests.test_trace.Test_Trace) ... SKIP test_multi_roundtrips (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_ordering (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_plot (pysal.model.spvcm.tests.test_trace.Test_Trace) ... SKIP test_single_roundtrips (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_slicing (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_to_csv (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_to_df (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_validate_names (pysal.model.spvcm.tests.test_trace.Test_Trace) ... ok test_bin (pysal.viz.mapclassify.tests.test_mapclassify.TestBin) ... ok test_bin1d (pysal.viz.mapclassify.tests.test_mapclassify.TestBin1d) ... ok test_bin_c (pysal.viz.mapclassify.tests.test_mapclassify.TestBinC) ... ok test_Box_Plot (pysal.viz.mapclassify.tests.test_mapclassify.TestBoxPlot) ... ok test_Equal_Interval (pysal.viz.mapclassify.tests.test_mapclassify.TestEqualInterval) ... ok test_find_bin (pysal.viz.mapclassify.tests.test_mapclassify.TestFindBin) ... ok test_Fisher_Jenks (pysal.viz.mapclassify.tests.test_mapclassify.TestFisherJenks) ... ok test_gadf (pysal.viz.mapclassify.tests.test_mapclassify.TestGadf) ... ok test_HeadTail_Breaks (pysal.viz.mapclassify.tests.test_mapclassify.TestHeadTailBreaks) ... ok test_Jenks_Caspall (pysal.viz.mapclassify.tests.test_mapclassify.TestJenksCaspall) ... ok test_Jenks_Caspall_Forced (pysal.viz.mapclassify.tests.test_mapclassify.TestJenksCaspallForced) ... ok test_Jenks_Caspall_Sampled (pysal.viz.mapclassify.tests.test_mapclassify.TestJenksCaspallSampled) ... ok test_K_classifiers (pysal.viz.mapclassify.tests.test_mapclassify.TestKClassifiers) ... ok test_apply (pysal.viz.mapclassify.tests.test_mapclassify.TestMake) ... ok test_make (pysal.viz.mapclassify.tests.test_mapclassify.TestMake) ... ok test_Map_Classifier (pysal.viz.mapclassify.tests.test_mapclassify.TestMapClassifier) ... ok test___repr__ (pysal.viz.mapclassify.tests.test_mapclassify.TestMapClassifier) ... ok test___str__ (pysal.viz.mapclassify.tests.test_mapclassify.TestMapClassifier) ... ok test_get_adcm (pysal.viz.mapclassify.tests.test_mapclassify.TestMapClassifier) ... ok test_get_gadf (pysal.viz.mapclassify.tests.test_mapclassify.TestMapClassifier) ... ok test_get_tss (pysal.viz.mapclassify.tests.test_mapclassify.TestMapClassifier) ... ok test_Max_P_Classifier (pysal.viz.mapclassify.tests.test_mapclassify.TestMaxPClassifier) ... ok test_Maximum_Breaks (pysal.viz.mapclassify.tests.test_mapclassify.TestMaximumBreaks) ... ok test_Natural_Breaks (pysal.viz.mapclassify.tests.test_mapclassify.TestNaturalBreaks) ... ok test_Natural_Breaks_randomData (pysal.viz.mapclassify.tests.test_mapclassify.TestNaturalBreaks) ... ok test_Natural_Breaks_stability (pysal.viz.mapclassify.tests.test_mapclassify.TestNaturalBreaks) ... ok test_natural_breaks (pysal.viz.mapclassify.tests.test_mapclassify.TestNaturalBreaks) ... ok test_Percentiles (pysal.viz.mapclassify.tests.test_mapclassify.TestPercentiles) ... ok test_quantile (pysal.viz.mapclassify.tests.test_mapclassify.TestQuantile) ... ok test_quantile_k (pysal.viz.mapclassify.tests.test_mapclassify.TestQuantile) ... ok test_quantile_k4 (pysal.viz.mapclassify.tests.test_mapclassify.TestQuantile) ... ok test_Quantiles (pysal.viz.mapclassify.tests.test_mapclassify.TestQuantiles) ... ok test_Std_Mean (pysal.viz.mapclassify.tests.test_mapclassify.TestStdMean) ... ok test_update (pysal.viz.mapclassify.tests.test_mapclassify.TestUpdate) ... ok test_User_Defined (pysal.viz.mapclassify.tests.test_mapclassify.TestUserDefined) ... ok ====================================================================== ERROR: test_network_f (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 168, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_network_g (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 168, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_network_k (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 168, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_add_point_pattern (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 71, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_all_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 71, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_count_per_edge (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 71, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_count_per_graph_edge (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 71, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_nearest_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 71, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_simulate_normal_observations (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 71, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_simulate_poisson_observations (pysal.explore.spaghetti.tests.test_network_api_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_gdf.py", line 71, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_network_f (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 153, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_network_g (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 153, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_network_k (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 153, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_add_point_pattern (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 60, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_all_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 60, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_count_per_edge (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 60, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_count_per_graph_edge (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 60, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_nearest_neighbor_distances (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 60, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_simulate_normal_observations (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 60, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_simulate_poisson_observations (pysal.explore.spaghetti.tests.test_network_api_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_api_from_shp.py", line 60, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_network_f (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 170, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_network_g (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 170, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_network_k (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 170, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_add_point_pattern (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 73, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_all_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 73, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_count_per_edge (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 73, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_count_per_graph_edge (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 73, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_nearest_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 73, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_simulate_normal_observations (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 73, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_simulate_poisson_observations (pysal.explore.spaghetti.tests.test_network_from_gdf.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_gdf.py", line 73, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Got coordinate system fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_network_f (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 157, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_network_g (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 157, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_network_k (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkAnalysis) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 157, in setUp self.ntw.snapobservations(in_data, pt_str, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_add_point_pattern (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 62, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_all_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 62, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_count_per_edge (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 62, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_count_per_graph_edge (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 62, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_nearest_neighbor_distances (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 62, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_simulate_normal_observations (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 62, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_simulate_poisson_observations (pysal.explore.spaghetti.tests.test_network_from_shp.TestNetworkPointPattern) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/tests/test_network_from_shp.py", line 62, in setUp self.ntw.snapobservations(in_data, obs, attribute=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 510, in snapobservations self._snap_to_edge(self.pointpatterns[name]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/network.py", line 610, in _snap_to_edge snapped = util.snap_points_on_segments(points, segments) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/explore/spaghetti/util.py", line 343, in snap_points_on_segments rt.insert(segment, r) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_alpha_shapes (pysal.lib.cg.tests.test_ashapes.Test_Alpha_Shapes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/test_ashapes.py", line 24, in setUp self.a05 = geopandas.read_file(os.path.join(this_directory, 'data/alpha_05.shp')).geometry.item() File "/usr/lib/python3/dist-packages/pandas/core/base.py", line 740, in item return self.values.item() AttributeError: 'GeometryArray' object has no attribute 'item' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Layer has no coordinate system fiona.ogrext: DEBUG: Projection not found (cogr_crs was NULL) fiona.ogrext: DEBUG: Layer has no coordinate system fiona.ogrext: DEBUG: Projection not found (cogr_crs was NULL) fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Layer has no coordinate system fiona.ogrext: DEBUG: Projection not found (cogr_crs was NULL) fiona.ogrext: DEBUG: Layer has no coordinate system fiona.ogrext: DEBUG: Projection not found (cogr_crs was NULL) fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_auto (pysal.lib.cg.tests.test_ashapes.Test_Alpha_Shapes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/test_ashapes.py", line 24, in setUp self.a05 = geopandas.read_file(os.path.join(this_directory, 'data/alpha_05.shp')).geometry.item() File "/usr/lib/python3/dist-packages/pandas/core/base.py", line 740, in item return self.values.item() AttributeError: 'GeometryArray' object has no attribute 'item' -------------------- >> begin captured logging << -------------------- fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Layer has no coordinate system fiona.ogrext: DEBUG: Projection not found (cogr_crs was NULL) fiona.ogrext: DEBUG: Layer has no coordinate system fiona.ogrext: DEBUG: Projection not found (cogr_crs was NULL) fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: fiona.env: DEBUG: Entering env context: fiona.env: DEBUG: Starting outermost env fiona.env: DEBUG: No GDAL environment exists fiona.env: DEBUG: New GDAL environment created fiona._env: DEBUG: Logging error handler pushed. fiona._env: DEBUG: All drivers registered. fiona._env: DEBUG: GDAL data files are available at built-in paths fiona._env: DEBUG: PROJ data files are available at built-in paths fiona._env: DEBUG: Started GDALEnv . fiona.env: DEBUG: Updated existing with options {} fiona.env: DEBUG: Entered env context: fiona.ogrext: DEBUG: Layer has no coordinate system fiona.ogrext: DEBUG: Projection not found (cogr_crs was NULL) fiona.ogrext: DEBUG: Layer has no coordinate system fiona.ogrext: DEBUG: Projection not found (cogr_crs was NULL) fiona.ogrext: DEBUG: Index: 0 fiona.collection: DEBUG: Flushed buffer fiona.collection: DEBUG: Stopped session fiona.env: DEBUG: Exiting env context: fiona.env: DEBUG: Cleared existing options fiona._env: DEBUG: Stopping GDALEnv . fiona._env: DEBUG: Error handler popped. fiona._env: DEBUG: Stopped GDALEnv . fiona.env: DEBUG: Exiting outermost env fiona.env: DEBUG: Exited env context: --------------------- >> end captured logging << --------------------- ====================================================================== ERROR: test_rtree (pysal.lib.cg.tests.test_rtree.Pyrtree_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/test_rtree.py", line 27, in test_rtree t.insert(object, self.objects[object]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_rtree (pysal.lib.cg.tests.test_rtree.Pyrtree_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/tests/test_rtree.py", line 27, in test_rtree t.insert(object, self.objects[object]) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 200, in insert self.cursor.insert(o, orect) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 417, in insert self._balance() File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/cg/rtree.py", line 451, in _balance t = time.clock() AttributeError: module 'time' has no attribute 'clock' ====================================================================== ERROR: test_gen_ak (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_diagnostics_sp.py", line 106, in setUp reg = TSLS(y, X, yd, q=q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_gen_mi (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_diagnostics_sp.py", line 106, in setUp reg = TSLS(y, X, yd, q=q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_gen_p (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_diagnostics_sp.py", line 106, in setUp reg = TSLS(y, X, yd, q=q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_sp_ak (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_diagnostics_sp.py", line 106, in setUp reg = TSLS(y, X, yd, q=q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_sp_mi (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_diagnostics_sp.py", line 106, in setUp reg = TSLS(y, X, yd, q=q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_sp_p (pysal.model.spreg.tests.test_diagnostics_sp.TestAKTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_diagnostics_sp.py", line 106, in setUp reg = TSLS(y, X, yd, q=q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: Failure: TypeError (No loop matching the specified signature and casting was found for ufunc add) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python3/dist-packages/nose/failure.py", line 39, in runTest raise self.exc_val.with_traceback(self.tb) File "/usr/lib/python3/dist-packages/nose/loader.py", line 416, in loadTestsFromName module = self.importer.importFromPath( File "/usr/lib/python3/dist-packages/nose/importer.py", line 47, in importFromPath return self.importFromDir(dir_path, fqname) File "/usr/lib/python3/dist-packages/nose/importer.py", line 94, in importFromDir mod = load_module(part_fqname, fh, filename, desc) File "/usr/lib/python3.8/imp.py", line 234, in load_module return load_source(name, filename, file) File "/usr/lib/python3.8/imp.py", line 171, in load_source module = _load(spec) File "", line 702, in _load File "", line 671, in _load_unlocked File "", line 783, in exec_module File "", line 219, in _call_with_frames_removed File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_diagnostics_tsls.py", line 25, in reg = TSLS(y, X, yd, q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp.TestGMCombo) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp.py", line 270, in test_model reg = SP.GM_Combo(self.y, self.X, w=self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp.py", line 1016, in __init__ SUMMARY.GM_Combo(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 507, in GM_Combo beta_diag_lag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp.TestGMEndogError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp.py", line 171, in test_model reg = SP.GM_Endog_Error(self.y, self.X, self.yd, self.q, self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp.py", line 623, in __init__ SUMMARY.GM_Endog_Error(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 323, in GM_Endog_Error beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp.TestGMError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp.py", line 64, in test_model reg = SP.GM_Error(self.y, self.X, self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp.py", line 294, in __init__ SUMMARY.GM_Error(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 289, in GM_Error beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_het.TestGMComboHet) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het.py", line 342, in test_model reg = HET.GM_Combo_Het(self.y, self.X, w=self.w, step1c=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het.py", line 1192, in __init__ SUMMARY.GM_Combo_Het(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 584, in GM_Combo_Het beta_diag_lag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_het.TestGMEndogErrorHet) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het.py", line 206, in test_model reg = HET.GM_Endog_Error_Het(self.y, self.X, self.yd, self.q, self.w, step1c=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het.py", line 762, in __init__ SUMMARY.GM_Endog_Error_Het(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 469, in GM_Endog_Error_Het beta_diag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_het.TestGMErrorHet) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het.py", line 74, in test_model reg = HET.GM_Error_Het(self.y, self.X, self.w, step1c=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het.py", line 348, in __init__ SUMMARY.GM_Error_Het(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 433, in GM_Error_Het beta_diag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_regimes.py", line 47, in test_model reg = SP.GM_Error_Het_Regimes(self.y, self.X, self.regimes, self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 371, in __init__ SUMMARY.GM_Error_Het(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 433, in GM_Error_Het beta_diag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_combo (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_regimes.py", line 214, in test_model_combo reg = SP.GM_Combo_Het_Regimes(self.y, self.X2, self.regimes, self.yd, self.q, w=self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 1388, in __init__ SUMMARY.GM_Combo_Het(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 584, in GM_Combo_Het beta_diag_lag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_combo_regi_error (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_regimes.py", line 268, in test_model_combo_regi_error reg = SP.GM_Combo_Het_Regimes(self.y, self.X2, self.regimes, self.yd, self.q, w=self.w, regime_lag_sep=True, regime_err_sep=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 1372, in __init__ GM_Endog_Error_Het_Regimes.__init__(self, y=y, x=x, yend=yend, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 798, in __init__ self._endog_error_regimes_multi(y, x, regimes, w, yend, q, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 967, in _endog_error_regimes_multi SUMMARY.GM_Combo_Het_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 602, in GM_Combo_Het_multi beta_diag_lag(mreg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_endog (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_regimes.py", line 128, in test_model_endog reg = SP.GM_Endog_Error_Het_Regimes(self.y, self.X2, self.yd, self.q, self.regimes, self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 881, in __init__ SUMMARY.GM_Endog_Error_Het(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 469, in GM_Endog_Error_Het beta_diag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_endog_regi_error (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_regimes.py", line 177, in test_model_endog_regi_error reg = SP.GM_Endog_Error_Het_Regimes(self.y, self.X2, self.yd, self.q, self.regimes, self.w, regime_err_sep=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 798, in __init__ self._endog_error_regimes_multi(y, x, regimes, w, yend, q, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 970, in _endog_error_regimes_multi SUMMARY.GM_Endog_Error_Het_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 487, in GM_Endog_Error_Het_multi beta_diag(mreg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_regi_error (pysal.model.spreg.tests.test_error_sp_het_regimes.TestGM_Error_Het_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_regimes.py", line 92, in test_model_regi_error reg = SP.GM_Error_Het_Regimes(self.y, self.X, self.regimes, self.w, regime_err_sep=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 313, in __init__ self._error_regimes_multi(y, x, regimes, w, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het_regimes.py", line 443, in _error_regimes_multi SUMMARY.GM_Error_Het_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 450, in GM_Error_Het_multi beta_diag(mreg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestGMComboHet) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_sparse.py", line 349, in test_model reg = HET.GM_Combo_Het(self.y, self.X, w=self.w, step1c=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het.py", line 1192, in __init__ SUMMARY.GM_Combo_Het(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 584, in GM_Combo_Het beta_diag_lag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestGMEndogErrorHet) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_sparse.py", line 211, in test_model reg = HET.GM_Endog_Error_Het(self.y, self.X, self.yd, self.q, self.w, step1c=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het.py", line 762, in __init__ SUMMARY.GM_Endog_Error_Het(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 469, in GM_Endog_Error_Het beta_diag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_het_sparse.TestGMErrorHet) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_het_sparse.py", line 77, in test_model reg = HET.GM_Error_Het(self.y, self.X, self.w, step1c=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_het.py", line 348, in __init__ SUMMARY.GM_Error_Het(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 433, in GM_Error_Het beta_diag(reg, 'het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom.GM_Combo_Hom_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom.py", line 264, in test_model reg = HOM.GM_Combo_Hom(self.y, self.X, w=self.w, A1='hom_sc') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom.py", line 1197, in __init__ SUMMARY.GM_Combo_Hom(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 545, in GM_Combo_Hom beta_diag_lag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom.GM_Combo_Hom_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom.py", line 264, in test_model reg = HOM.GM_Combo_Hom(self.y, self.X, w=self.w, A1='hom_sc') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom.py", line 1197, in __init__ SUMMARY.GM_Combo_Hom(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 545, in GM_Combo_Hom beta_diag_lag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom.GM_Endog_Error_Hom_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom.py", line 162, in test_model reg = HOM.GM_Endog_Error_Hom(self.y, self.X, self.yd, self.q, self.w, A1='hom_sc') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom.py", line 768, in __init__ SUMMARY.GM_Endog_Error_Hom(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 395, in GM_Endog_Error_Hom beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom.GM_Error_Hom_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom.py", line 57, in test_model reg = HOM.GM_Error_Hom(self.y, self.X, self.w, A1='hom_sc') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom.py", line 358, in __init__ SUMMARY.GM_Error_Hom(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 359, in GM_Error_Hom beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_regimes.py", line 46, in test_model reg = SP.GM_Error_Hom_Regimes(self.y, self.X, self.regimes, self.w, A1='het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 385, in __init__ SUMMARY.GM_Error_Hom(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 359, in GM_Error_Hom beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_combo (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_regimes.py", line 214, in test_model_combo reg = SP.GM_Combo_Hom_Regimes(self.y, self.X2, self.regimes, self.yd, self.q, w=self.w, A1='het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 1403, in __init__ SUMMARY.GM_Combo_Hom(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 545, in GM_Combo_Hom beta_diag_lag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_combo_regi_error (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_regimes.py", line 270, in test_model_combo_regi_error reg = SP.GM_Combo_Hom_Regimes(self.y, self.X2, self.regimes, self.yd, self.q, w=self.w, regime_lag_sep=True, regime_err_sep=True, A1='het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 1388, in __init__ GM_Endog_Error_Hom_Regimes.__init__(self, y=y, x=x, yend=yend, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 816, in __init__ self._endog_error_regimes_multi(y, x, regimes, w, yend, q, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 980, in _endog_error_regimes_multi SUMMARY.GM_Combo_Hom_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 563, in GM_Combo_Hom_multi beta_diag_lag(mreg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_endog (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_regimes.py", line 126, in test_model_endog reg = SP.GM_Endog_Error_Hom_Regimes(self.y, self.X2, self.yd, self.q, self.regimes, self.w, A1='het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 894, in __init__ SUMMARY.GM_Endog_Error_Hom(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 395, in GM_Endog_Error_Hom beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_endog_regi_error (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_regimes.py", line 177, in test_model_endog_regi_error reg = SP.GM_Endog_Error_Hom_Regimes(self.y, self.X2, self.yd, self.q, self.regimes, self.w, regime_err_sep=True, A1='het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 816, in __init__ self._endog_error_regimes_multi(y, x, regimes, w, yend, q, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 983, in _endog_error_regimes_multi SUMMARY.GM_Endog_Error_Hom_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 413, in GM_Endog_Error_Hom_multi beta_diag(mreg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_regi_error (pysal.model.spreg.tests.test_error_sp_hom_regimes.TestGM_Error_Hom_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_regimes.py", line 92, in test_model_regi_error model = SP.GM_Error_Hom_Regimes(self.y_a, self.x_a, self.regi_a, w=self.w_a, regime_err_sep=True, A1='het') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 329, in __init__ self._error_regimes_multi(y, x, regimes, w, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom_regimes.py", line 457, in _error_regimes_multi SUMMARY.GM_Error_Hom_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 377, in GM_Error_Hom_multi beta_diag(mreg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.GM_Combo_Hom_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_sparse.py", line 269, in test_model reg = HOM.GM_Combo_Hom(self.y, self.X, w=self.w, A1='hom_sc') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom.py", line 1197, in __init__ SUMMARY.GM_Combo_Hom(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 545, in GM_Combo_Hom beta_diag_lag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.GM_Combo_Hom_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_sparse.py", line 269, in test_model reg = HOM.GM_Combo_Hom(self.y, self.X, w=self.w, A1='hom_sc') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom.py", line 1197, in __init__ SUMMARY.GM_Combo_Hom(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 545, in GM_Combo_Hom beta_diag_lag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.GM_Endog_Error_Hom_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_sparse.py", line 166, in test_model reg = HOM.GM_Endog_Error_Hom(self.y, self.X, self.yd, self.q, self.w, A1='hom_sc') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom.py", line 768, in __init__ SUMMARY.GM_Endog_Error_Hom(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 395, in GM_Endog_Error_Hom beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_hom_sparse.GM_Error_Hom_Tester) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_hom_sparse.py", line 59, in test_model reg = HOM.GM_Error_Hom(self.y, self.X, self.w, A1='hom_sc') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_hom.py", line 358, in __init__ SUMMARY.GM_Error_Hom(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 359, in GM_Error_Hom beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_regimes.py", line 47, in test_model reg = SP.GM_Error_Regimes(self.y, self.X, self.regimes, self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_regimes.py", line 332, in __init__ SUMMARY.GM_Error(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 289, in GM_Error beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_combo (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_regimes.py", line 218, in test_model_combo reg = SP.GM_Combo_Regimes(self.y, self.X1, self.regimes, self.yd, self.q, w=self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_regimes.py", line 1259, in __init__ SUMMARY.GM_Combo(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 507, in GM_Combo beta_diag_lag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_combo_regi_error (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_regimes.py", line 274, in test_model_combo_regi_error reg = SP.GM_Combo_Regimes(self.y, self.X1, self.regimes, self.yd, self.q, w=self.w, regime_lag_sep=True, regime_err_sep=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_regimes.py", line 1246, in __init__ GM_Endog_Error_Regimes.__init__(self, y=y, x=x, yend=yend, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_regimes.py", line 728, in __init__ self._endog_error_regimes_multi(y, x, regimes, w, yend, q, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_regimes.py", line 862, in _endog_error_regimes_multi SUMMARY.GM_Combo_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 525, in GM_Combo_multi beta_diag_lag(mreg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_endog (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_regimes.py", line 128, in test_model_endog reg = SP.GM_Endog_Error_Regimes(self.y, self.X1, self.yd, self.q, self.regimes, self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_regimes.py", line 777, in __init__ SUMMARY.GM_Endog_Error(reg=self, w=w, vm=vm, regimes=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 323, in GM_Endog_Error beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model_endog_regi_error (pysal.model.spreg.tests.test_error_sp_regimes.TestGM_Error_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_regimes.py", line 182, in test_model_endog_regi_error reg = SP.GM_Endog_Error_Regimes(self.y, self.X1, self.yd, self.q, self.regimes, self.w, regime_err_sep=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_regimes.py", line 728, in __init__ self._endog_error_regimes_multi(y, x, regimes, w, yend, q, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp_regimes.py", line 865, in _endog_error_regimes_multi SUMMARY.GM_Endog_Error_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 340, in GM_Endog_Error_multi beta_diag(mreg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestGMCombo) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_sparse.py", line 278, in test_model reg = SP.GM_Combo(self.y, self.X, w=self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp.py", line 1016, in __init__ SUMMARY.GM_Combo(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 507, in GM_Combo beta_diag_lag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestGMEndogError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_sparse.py", line 175, in test_model reg = SP.GM_Endog_Error(self.y, self.X, self.yd, self.q, self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp.py", line 623, in __init__ SUMMARY.GM_Endog_Error(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 323, in GM_Endog_Error beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_error_sp_sparse.TestGMError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_error_sp_sparse.py", line 67, in test_model reg = SP.GM_Error(self.y, self.X, self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/error_sp.py", line 294, in __init__ SUMMARY.GM_Error(reg=self, w=w, vm=vm) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 289, in GM_Error beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_LU (pysal.model.spreg.tests.test_ml_error.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_error.py", line 76, in test_LU self._estimate_and_compare(method='LU', RTOL=RTOL*10) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_error.py", line 25, in _estimate_and_compare reg = ML_Error(self.y,self.x,w=self.w,name_y=self.y_name,name_x=self.x_names,\ File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_error.py", line 466, in __init__ SUMMARY.ML_Error(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 243, in ML_Error beta_diag(reg, robust=None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_dense (pysal.model.spreg.tests.test_ml_error.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_error.py", line 73, in test_dense self._estimate_and_compare(method='FULL') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_error.py", line 25, in _estimate_and_compare reg = ML_Error(self.y,self.x,w=self.w,name_y=self.y_name,name_x=self.x_names,\ File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_error.py", line 466, in __init__ SUMMARY.ML_Error(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 243, in ML_Error beta_diag(reg, robust=None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_ord (pysal.model.spreg.tests.test_ml_error.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_error.py", line 79, in test_ord reg = ML_Error(self.y, self.x, w=self.w, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_error.py", line 466, in __init__ SUMMARY.ML_Error(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 243, in ML_Error beta_diag(reg, robust=None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model1 (pysal.model.spreg.tests.test_ml_error_regimes.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_error_regimes.py", line 43, in test_model1 reg = ML_Error_Regimes(self.y,self.x,self.regimes,w=self.w,name_y=self.y_name,name_x=self.x_names,\ File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_error_regimes.py", line 324, in __init__ SUMMARY.ML_Error( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 243, in ML_Error beta_diag(reg, robust=None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model2 (pysal.model.spreg.tests.test_ml_error_regimes.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_error_regimes.py", line 98, in test_model2 reg = ML_Error_Regimes(self.y,self.x,self.regimes,w=self.w,name_y=self.y_name,name_x=self.x_names,\ File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_error_regimes.py", line 300, in __init__ self._error_regimes_multi(y, x, regimes, w, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_error_regimes.py", line 397, in _error_regimes_multi SUMMARY.ML_Error_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 265, in ML_Error_multi beta_diag(mreg, robust=None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_LU (pysal.model.spreg.tests.test_ml_lag.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_lag.py", line 118, in test_LU self._estimate_and_compare(method='LU') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_lag.py", line 26, in _estimate_and_compare reg = ML_Lag(self.y, self.x, w=self.w, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_lag.py", line 563, in __init__ SUMMARY.ML_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 197, in ML_Lag beta_diag_lag(reg, robust=None, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_dense (pysal.model.spreg.tests.test_ml_lag.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_lag.py", line 70, in test_dense self._estimate_and_compare(method='FULL') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_lag.py", line 26, in _estimate_and_compare reg = ML_Lag(self.y, self.x, w=self.w, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_lag.py", line 563, in __init__ SUMMARY.ML_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 197, in ML_Lag beta_diag_lag(reg, robust=None, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_ord (pysal.model.spreg.tests.test_ml_lag.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_lag.py", line 73, in test_ord reg = ML_Lag(self.y, self.x, w=self.w, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_lag.py", line 563, in __init__ SUMMARY.ML_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 197, in ML_Lag beta_diag_lag(reg, robust=None, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model1 (pysal.model.spreg.tests.test_ml_lag_regimes.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_lag_regimes.py", line 29, in test_model1 reg = ML_Lag_Regimes(self.y,self.x,self.regimes,w=self.w,name_y=self.y_name,name_x=self.x_names,\ File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_lag_regimes.py", line 354, in __init__ SUMMARY.ML_Lag( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 197, in ML_Lag beta_diag_lag(reg, robust=None, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model2 (pysal.model.spreg.tests.test_ml_lag_regimes.TestMLError) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_ml_lag_regimes.py", line 85, in test_model2 reg = ML_Lag_Regimes(self.y,self.x,self.regimes,w=self.w,name_y=self.y_name,name_x=self.x_names,\ File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_lag_regimes.py", line 331, in __init__ self.ML_Lag_Regimes_Multi(y, x, w_i, w, regi_ids, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/ml_lag_regimes.py", line 430, in ML_Lag_Regimes_Multi SUMMARY.ML_Lag_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 219, in ML_Lag_multi beta_diag_lag(mreg, robust=None, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_model (pysal.model.spreg.tests.test_probit.TestProbit) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_probit.py", line 72, in test_model reg = PB.Probit(self.y, self.X, w=self.w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/probit.py", line 818, in __init__ SUMMARY.Probit(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 623, in Probit beta_diag(reg, None) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_basic (pysal.model.spreg.tests.test_twosls.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls.py", line 122, in test_basic reg = TSLS(self.y, self.X, self.yd, self.q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_hac (pysal.model.spreg.tests.test_twosls.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls.py", line 204, in test_hac reg = TSLS(self.y, self.X, self.yd, self.q, robust='hac', gwk=gwk) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_n_k (pysal.model.spreg.tests.test_twosls.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls.py", line 184, in test_n_k reg = TSLS(self.y, self.X, self.yd, self.q, sig2n_k=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_names (pysal.model.spreg.tests.test_twosls.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls.py", line 235, in test_names reg = TSLS(self.y, self.X, self.yd, self.q, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_spatial (pysal.model.spreg.tests.test_twosls.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls.py", line 215, in test_spatial reg = TSLS(self.y, self.X, self.yd, self.q, spat_diag=True, w=w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_white (pysal.model.spreg.tests.test_twosls.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls.py", line 193, in test_white reg = TSLS(self.y, self.X, self.yd, self.q, robust='white') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_basic (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_regimes.py", line 26, in test_basic reg = TSLS_Regimes(self.y, self.x, self.yd, self.q, self.regimes, regime_err_sep=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_regimes.py", line 331, in __init__ SUMMARY.TSLS( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_n_k (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_regimes.py", line 153, in test_n_k reg = TSLS_Regimes(self.y, self.x, self.yd, self.q, self.regimes, sig2n_k=True, regime_err_sep=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_regimes.py", line 331, in __init__ SUMMARY.TSLS( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_names (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_regimes.py", line 202, in test_names reg = TSLS_Regimes(self.y, self.x, self.yd, self.q, self.regimes, regime_err_sep=False, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_regimes.py", line 331, in __init__ SUMMARY.TSLS( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_regi_err (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_regimes.py", line 240, in test_regi_err model = TSLS_Regimes(y, x1, regimes=regi, q=q, yend=x2, regime_err_sep=True, sig2n_k=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_regimes.py", line 308, in __init__ self._tsls_regimes_multi(x, yend, q, w, regi_ids, cores, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_regimes.py", line 412, in _tsls_regimes_multi SUMMARY.TSLS_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 122, in TSLS_multi beta_diag(mreg, mreg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_spatial (pysal.model.spreg.tests.test_twosls_regimes.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_regimes.py", line 172, in test_spatial reg = TSLS_Regimes(self.y, self.x, self.yd, self.q, self.regimes, spat_diag=True, w=w, regime_err_sep=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_regimes.py", line 331, in __init__ SUMMARY.TSLS( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test___init__ (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp.py", line 181, in test___init__ reg = GM_Lag(self.y, self.X, w=self.w, w_lags=2) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_init_discbd (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp.py", line 279, in test_init_discbd reg = GM_Lag(self.y, X, w=self.w, yend=yd, q=q, w_lags=2) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_init_hac_ (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp.py", line 265, in test_init_hac_ base_gm_lag = GM_Lag(self.y, self.X, w=self.w, w_lags=2, robust='hac', gwk=gwk) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_init_white_ (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp.py", line 252, in test_init_white_ base_gm_lag = GM_Lag(self.y, self.X, w=self.w, w_lags=2, robust='white') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_lag_q (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp.py", line 307, in test_lag_q reg = GM_Lag(self.y, X, w=self.w, yend=yd, q=q, w_lags=2, lag_q=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_n_k (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp.py", line 291, in test_n_k reg = GM_Lag(self.y, self.X, w=self.w, w_lags=2, sig2n_k=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_names (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp.py", line 349, in test_names reg = GM_Lag(self.y, X, yd, q, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_spatial (pysal.model.spreg.tests.test_twosls_sp.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp.py", line 322, in test_spatial reg = GM_Lag(self.y, X, yd, q, spat_diag=True, w=w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test___init__ (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_regimes.py", line 25, in test___init__ reg = GM_Lag_Regimes(self.y, self.X, self.regimes, w=self.w, sig2n_k=True, regime_lag_sep=False, regime_err_sep=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp_regimes.py", line 501, in __init__ SUMMARY.GM_Lag( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_all_regi (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_regimes.py", line 190, in test_all_regi reg = GM_Lag_Regimes(self.y, X, self.regimes, yend=yd, q=q, w=self.w, regime_lag_sep=False, regime_err_sep=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp_regimes.py", line 501, in __init__ SUMMARY.GM_Lag( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_all_regi_sig2 (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_regimes.py", line 231, in test_all_regi_sig2 model = GM_Lag_Regimes(y, x1, regi, q=q, yend=x2, w=w, regime_lag_sep=True, regime_err_sep=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp_regimes.py", line 474, in __init__ self.GM_Lag_Regimes_Multi(y, x, w_i, w, regi_ids, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp_regimes.py", line 604, in GM_Lag_Regimes_Multi SUMMARY.GM_Lag_multi( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 169, in GM_Lag_multi beta_diag_lag(mreg, mreg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_fixed_const (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_regimes.py", line 290, in test_fixed_const reg = GM_Lag_Regimes(self.y, X, self.regimes, yend=yd, q=q, w=self.w, constant_regi='one', regime_lag_sep=False, regime_err_sep=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp_regimes.py", line 501, in __init__ SUMMARY.GM_Lag( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_init_discbd (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_regimes.py", line 124, in test_init_discbd reg = GM_Lag_Regimes(self.y, X, self.regimes, yend=yd, q=q, lag_q=False, w=self.w, sig2n_k=True, regime_lag_sep=False, regime_err_sep=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp_regimes.py", line 501, in __init__ SUMMARY.GM_Lag( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_lag_q (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_regimes.py", line 165, in test_lag_q reg = GM_Lag_Regimes(self.y, X, self.regimes, yend=yd, q=q, w=self.w, sig2n_k=True, regime_lag_sep=False, regime_err_sep=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp_regimes.py", line 501, in __init__ SUMMARY.GM_Lag( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_names (pysal.model.spreg.tests.test_twosls_sp_regimes.TestGMLag_Regimes) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_regimes.py", line 331, in test_names reg = GM_Lag_Regimes(self.y, x, self.regimes, yend=yd, q=q, w=self.w, name_y=y_var, name_x=x_var, name_yend=yd_var, name_q=q_var, name_regimes=r_var, name_ds='columbus', name_w='columbus.gal', regime_lag_sep=False, regime_err_sep=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp_regimes.py", line 501, in __init__ SUMMARY.GM_Lag( File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test___init__ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_sparse.py", line 184, in test___init__ reg = GM_Lag(self.y, self.X, w=self.w, w_lags=2) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_init_discbd (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_sparse.py", line 285, in test_init_discbd reg = GM_Lag(self.y, X, w=self.w, yend=yd, q=q, w_lags=2) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_init_hac_ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_sparse.py", line 270, in test_init_hac_ base_gm_lag = GM_Lag(self.y, self.X, w=self.w, w_lags=2, robust='hac', gwk=gwk) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_init_white_ (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_sparse.py", line 256, in test_init_white_ base_gm_lag = GM_Lag(self.y, self.X, w=self.w, w_lags=2, robust='white') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_lag_q (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_sparse.py", line 315, in test_lag_q reg = GM_Lag(self.y, X, w=self.w, yend=yd, q=q, w_lags=2, lag_q=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_n_k (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_sparse.py", line 298, in test_n_k reg = GM_Lag(self.y, self.X, w=self.w, w_lags=2, sig2n_k=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_names (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_sparse.py", line 359, in test_names reg = GM_Lag(self.y, X, yd, q, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_spatial (pysal.model.spreg.tests.test_twosls_sp_sparse.TestGMLag) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sp_sparse.py", line 331, in test_spatial reg = GM_Lag(self.y, X, yd, q, spat_diag=True, w=w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls_sp.py", line 493, in __init__ SUMMARY.GM_Lag(reg=self, w=w, vm=vm, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 150, in GM_Lag beta_diag_lag(reg, reg.robust, error=False) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 725, in beta_diag_lag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_basic (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sparse.py", line 124, in test_basic reg = TSLS(self.y, self.X, self.yd, self.q) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_hac (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sparse.py", line 206, in test_hac reg = TSLS(self.y, self.X, self.yd, self.q, robust='hac', gwk=gwk) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_n_k (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sparse.py", line 186, in test_n_k reg = TSLS(self.y, self.X, self.yd, self.q, sig2n_k=True) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_names (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sparse.py", line 237, in test_names reg = TSLS(self.y, self.X, self.yd, self.q, File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_spatial (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sparse.py", line 217, in test_spatial reg = TSLS(self.y, self.X, self.yd, self.q, spat_diag=True, w=w) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== ERROR: test_white (pysal.model.spreg.tests.test_twosls_sparse.TestTSLS) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/tests/test_twosls_sparse.py", line 195, in test_white reg = TSLS(self.y, self.X, self.yd, self.q, robust='white') File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/twosls.py", line 458, in __init__ SUMMARY.TSLS(reg=self, vm=vm, w=w, spat_diag=spat_diag) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 104, in TSLS beta_diag(reg, reg.robust) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/summary_output.py", line 714, in beta_diag reg.pr2 = diagnostics_tsls.pr2_aspatial(reg) File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/model/spreg/diagnostics_tsls.py", line 217, in pr2_aspatial pr = pearsonr(y, predy)[0] File "/usr/lib/python3/dist-packages/scipy/stats/stats.py", line 3410, in pearsonr xmean = x.mean(dtype=dtype) File "/usr/lib/python3/dist-packages/numpy/core/_methods.py", line 151, in _mean ret = umr_sum(arr, axis, dtype, out, keepdims) TypeError: No loop matching the specified signature and casting was found for ufunc add ====================================================================== FAIL: test_filter (pysal.lib.weights.tests.test_adjlist.Test_Adjlist) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/.pybuild/cpython3_3.8_pysal/build/pysal/lib/weights/tests/test_adjlist.py", line 38, in test_filter assert set(alist.focal.unique().tolist()) == set(list(range(4))) AssertionError ---------------------------------------------------------------------- Ran 1055 tests in 999.784s FAILED (SKIP=69, errors=139, failures=1) E: pybuild pybuild:341: test: plugin distutils failed with: exit code=1: cd /<>/.pybuild/cpython3_3.8_pysal/build; python3.8 -m nose -v --verbose dh_auto_test: error: pybuild --test -i python{version} -p 3.8 returned exit code 13 make[1]: *** [debian/rules:19: override_dh_auto_test] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:12: build] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20200407-1637 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 165640 Build-Time: 1013 Distribution: focal Fail-Stage: build Host Architecture: amd64 Install-Time: 102 Job: pysal_2.0.0-1.dsc Machine Architecture: amd64 Package: pysal Package-Time: 1118 Source-Version: 2.0.0-1 Space: 165640 Status: attempted Version: 2.0.0-1 -------------------------------------------------------------------------------- Finished at 20200407-1637 Build needed 00:18:38, 165640k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18962812 Scanning for processes to kill in build PACKAGEBUILD-18962812