https://launchpad.net/ubuntu/+archive/test-rebuild-20200728-groovy/+build/19682171 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-006 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:17:51 UTC 2020 aarch64 Buildd toolchain package versions: launchpad-buildd_188 python-lpbuildd_188 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 2 Aug 21:28:56 ntpdate[1906]: adjust time server 10.211.37.1 offset 0.021428 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19682171 --image-type chroot /home/buildd/filecache-default/3ff5711ac2503d035c89289b694a465e92f31811 Creating target for build PACKAGEBUILD-19682171 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19682171 Starting target for build PACKAGEBUILD-19682171 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19682171 'deb http://ftpmaster.internal/ubuntu groovy main universe' Overriding sources.list in build-PACKAGEBUILD-19682171 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19682171 Updating target for build PACKAGEBUILD-19682171 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 Packages [944 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main Translation-en [510 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/universe arm64 Packages [8662 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5251 kB] Fetched 15.6 MB in 6s (2717 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: base-files bsdutils build-essential ca-certificates libblkid1 libmount1 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libuuid1 mount util-linux 13 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1947 kB of archives. After this operation, 10.2 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy/main arm64 base-files arm64 11ubuntu10 [60.2 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 bsdutils arm64 1:2.35.2-9ubuntu1 [82.4 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main arm64 libselinux1 arm64 3.1-2 [64.9 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main arm64 util-linux arm64 2.35.2-9ubuntu1 [1008 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 mount arm64 2.35.2-9ubuntu1 [115 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main arm64 libblkid1 arm64 2.35.2-9ubuntu1 [126 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main arm64 libmount1 arm64 2.35.2-9ubuntu1 [137 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main arm64 libsemanage-common all 3.1-1 [10.2 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main arm64 libsemanage1 arm64 3.1-1 [80.6 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main arm64 libsmartcols1 arm64 2.35.2-9ubuntu1 [89.8 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main arm64 libuuid1 arm64 2.35.2-9ubuntu1 [21.4 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main arm64 ca-certificates all 20200601 [147 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main arm64 build-essential arm64 12.8ubuntu3 [4636 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 1947 kB in 0s (22.2 MB/s) (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu10_arm64.deb ... Unpacking base-files (11ubuntu10) over (11ubuntu9) ... Setting up base-files (11ubuntu10) ... Installing new version of config file /etc/update-motd.d/50-motd-news ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.35.2-9ubuntu1_arm64.deb ... Unpacking bsdutils (1:2.35.2-9ubuntu1) over (1:2.35.2-7ubuntu3) ... Setting up bsdutils (1:2.35.2-9ubuntu1) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../libselinux1_3.1-2_arm64.deb ... Unpacking libselinux1:arm64 (3.1-2) over (3.0-1build2) ... Setting up libselinux1:arm64 (3.1-2) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../util-linux_2.35.2-9ubuntu1_arm64.deb ... Unpacking util-linux (2.35.2-9ubuntu1) over (2.35.2-7ubuntu3) ... Setting up util-linux (2.35.2-9ubuntu1) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../mount_2.35.2-9ubuntu1_arm64.deb ... Unpacking mount (2.35.2-9ubuntu1) over (2.35.2-7ubuntu3) ... Preparing to unpack .../libblkid1_2.35.2-9ubuntu1_arm64.deb ... Unpacking libblkid1:arm64 (2.35.2-9ubuntu1) over (2.35.2-7ubuntu3) ... Setting up libblkid1:arm64 (2.35.2-9ubuntu1) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../libmount1_2.35.2-9ubuntu1_arm64.deb ... Unpacking libmount1:arm64 (2.35.2-9ubuntu1) over (2.35.2-7ubuntu3) ... Setting up libmount1:arm64 (2.35.2-9ubuntu1) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.1-1_all.deb ... Unpacking libsemanage-common (3.1-1) over (3.0-1build2) ... Setting up libsemanage-common (3.1-1) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../libsemanage1_3.1-1_arm64.deb ... Unpacking libsemanage1:arm64 (3.1-1) over (3.0-1build2) ... Setting up libsemanage1:arm64 (3.1-1) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.35.2-9ubuntu1_arm64.deb ... Unpacking libsmartcols1:arm64 (2.35.2-9ubuntu1) over (2.35.2-7ubuntu3) ... Setting up libsmartcols1:arm64 (2.35.2-9ubuntu1) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../libuuid1_2.35.2-9ubuntu1_arm64.deb ... Unpacking libuuid1:arm64 (2.35.2-9ubuntu1) over (2.35.2-7ubuntu3) ... Setting up libuuid1:arm64 (2.35.2-9ubuntu1) ... (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../ca-certificates_20200601_all.deb ... Unpacking ca-certificates (20200601) over (20190110ubuntu2) ... Preparing to unpack .../build-essential_12.8ubuntu3_arm64.deb ... Unpacking build-essential (12.8ubuntu3) over (12.8ubuntu1) ... Setting up ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 13 added, 14 removed; done. Setting up mount (2.35.2-9ubuntu1) ... Setting up build-essential (12.8ubuntu3) ... Processing triggers for systemd (245.6-3ubuntu3) ... Processing triggers for libc-bin (2.31-0ubuntu10) ... Processing triggers for ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19682171 arm64 groovy -c chroot:build-PACKAGEBUILD-19682171 --arch=arm64 --dist=groovy --nolog kalign_3.2.3-3.dsc Initiating build PACKAGEBUILD-19682171 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:17:51 UTC 2020 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-006.buildd +==============================================================================+ | kalign 1:3.2.3-3 (arm64) 02 Aug 2020 21:29 | +==============================================================================+ Package: kalign Version: 1:3.2.3-3 Source Version: 1:3.2.3-3 Distribution: groovy Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/kalign-yXHXnG/kalign-3.2.3' with '<>' I: NOTICE: Log filtering will replace 'build/kalign-yXHXnG' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19682171/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- kalign_3.2.3-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-Y3I9Nj/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-Y3I9Nj/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Y3I9Nj/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Y3I9Nj/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Y3I9Nj/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-Y3I9Nj/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (100 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-Y3I9Nj/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (70.1 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12776 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 12), libsimde-dev Filtered Build-Depends: debhelper-compat (= 12), libsimde-dev dpkg-deb: building package 'sbuild-build-depends-kalign-dummy' in '/<>/resolver-F765Ba/apt_archive/sbuild-build-depends-kalign-dummy.deb'. Ign:1 copy:/<>/resolver-F765Ba/apt_archive ./ InRelease Get:2 copy:/<>/resolver-F765Ba/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-F765Ba/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-F765Ba/apt_archive ./ Sources [220 B] Get:5 copy:/<>/resolver-F765Ba/apt_archive ./ Packages [537 B] Fetched 2876 B in 0s (73.0 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install kalign build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu66 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsimde-dev libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu66 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsimde-dev libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-kalign-dummy 0 upgraded, 34 newly installed, 0 to remove and 0 not upgraded. Need to get 16.8 MB of archives. After this operation, 67.4 MB of additional disk space will be used. Get:1 copy:/<>/resolver-F765Ba/apt_archive ./ sbuild-build-depends-kalign-dummy 0.invalid.0 [868 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 bsdextrautils arm64 2.35.2-9ubuntu1 [73.8 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main arm64 libuchardet0 arm64 0.0.7-1 [68.0 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main arm64 groff-base arm64 1.22.4-5 [797 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 libpipeline1 arm64 1.5.2-2build1 [26.1 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main arm64 man-db arm64 2.9.3-2 [1100 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main arm64 libmagic-mgc arm64 1:5.38-5 [218 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main arm64 libmagic1 arm64 1:5.38-5 [71.6 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main arm64 file arm64 1:5.38-5 [23.3 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main arm64 libelf1 arm64 0.180-0ubuntu1 [43.6 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main arm64 libglib2.0-0 arm64 2.64.4-1 [1198 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main arm64 libicu66 arm64 66.1-2ubuntu3 [8357 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main arm64 libxml2 arm64 2.9.10+dfsg-5 [572 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main arm64 gettext-base arm64 0.19.8.1-10build1 [48.2 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main arm64 libsigsegv2 arm64 2.12-2build1 [13.7 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main arm64 m4 arm64 1.4.18-4 [194 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main arm64 autoconf all 2.69-11.1 [321 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main arm64 autotools-dev all 20180224.1 [39.6 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main arm64 automake all 1:1.16.2-3ubuntu1 [548 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main arm64 autopoint all 0.19.8.1-10build1 [412 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main arm64 libtool all 2.4.6-14 [161 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main arm64 dh-autoreconf all 19 [16.1 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main arm64 libdebhelper-perl all 13.2ubuntu1 [64.2 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main arm64 libsub-override-perl all 0.09-2 [9532 B] Get:26 http://ftpmaster.internal/ubuntu groovy/main arm64 libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main arm64 dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:28 http://ftpmaster.internal/ubuntu groovy/main arm64 dwz arm64 0.13-5 [134 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main arm64 libcroco3 arm64 0.6.13-1 [77.1 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main arm64 gettext arm64 0.19.8.1-10build1 [850 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main arm64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main arm64 po-debconf all 1.0.21 [233 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main arm64 debhelper all 13.2ubuntu1 [878 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/universe arm64 libsimde-dev all 0.0.0.git.20200424-1 [87.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 16.8 MB in 1s (30.8 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 12776 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.35.2-9ubuntu1_arm64.deb ... Unpacking bsdextrautils (2.35.2-9ubuntu1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../01-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_arm64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../03-libpipeline1_1.5.2-2build1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.2-2build1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_arm64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../05-libmagic-mgc_1%3a5.38-5_arm64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../06-libmagic1_1%3a5.38-5_arm64.deb ... Unpacking libmagic1:arm64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../07-file_1%3a5.38-5_arm64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../08-libelf1_0.180-0ubuntu1_arm64.deb ... Unpacking libelf1:arm64 (0.180-0ubuntu1) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../09-libglib2.0-0_2.64.4-1_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.64.4-1) ... Selecting previously unselected package libicu66:arm64. Preparing to unpack .../10-libicu66_66.1-2ubuntu3_arm64.deb ... Unpacking libicu66:arm64 (66.1-2ubuntu3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../11-libxml2_2.9.10+dfsg-5_arm64.deb ... Unpacking libxml2:arm64 (2.9.10+dfsg-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../12-gettext-base_0.19.8.1-10build1_arm64.deb ... Unpacking gettext-base (0.19.8.1-10build1) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../13-libsigsegv2_2.12-2build1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.12-2build1) ... Selecting previously unselected package m4. Preparing to unpack .../14-m4_1.4.18-4_arm64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../15-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../16-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../17-automake_1%3a1.16.2-3ubuntu1_all.deb ... Unpacking automake (1:1.16.2-3ubuntu1) ... Selecting previously unselected package autopoint. 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Preparing to unpack .../30-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../31-debhelper_13.2ubuntu1_all.deb ... Unpacking debhelper (13.2ubuntu1) ... Selecting previously unselected package libsimde-dev. Preparing to unpack .../32-libsimde-dev_0.0.0.git.20200424-1_all.deb ... Unpacking libsimde-dev (0.0.0.git.20200424-1) ... Selecting previously unselected package sbuild-build-depends-kalign-dummy. Preparing to unpack .../33-sbuild-build-depends-kalign-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-kalign-dummy (0.invalid.0) ... Setting up libpipeline1:arm64 (1.5.2-2build1) ... Setting up libsimde-dev (0.0.0.git.20200424-1) ... Setting up bsdextrautils (2.35.2-9ubuntu1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libmagic-mgc (1:5.38-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:arm64 (2.64.4-1) ... No schema files found: doing nothing. Setting up libicu66:arm64 (66.1-2ubuntu3) ... Setting up libdebhelper-perl (13.2ubuntu1) ... Setting up libmagic1:arm64 (1:5.38-5) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-5) ... Setting up autotools-dev (20180224.1) ... Setting up libsigsegv2:arm64 (2.12-2build1) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:arm64 (0.180-0ubuntu1) ... Setting up libxml2:arm64 (2.9.10+dfsg-5) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up libcroco3:arm64 (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up automake (1:1.16.2-3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10build1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.2ubuntu1) ... Setting up sbuild-build-depends-kalign-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-0ubuntu10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-177-generic arm64 (aarch64) Toolchain package versions: binutils_2.35-1ubuntu1 dpkg-dev_1.19.7ubuntu4 g++-10_10.2.0-3ubuntu1 gcc-10_10.2.0-3ubuntu1 libc6-dev_2.31-0ubuntu10 libstdc++-10-dev_10.2.0-3ubuntu1 libstdc++6_10.2.0-3ubuntu1 linux-libc-dev_5.4.0-42.46 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.7 autoconf_2.69-11.1 automake_1:1.16.2-3ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu10 base-passwd_3.5.47 bash_5.0-6ubuntu2 binutils_2.35-1ubuntu1 binutils-aarch64-linux-gnu_2.35-1ubuntu1 binutils-common_2.35-1ubuntu1 bsdextrautils_2.35.2-9ubuntu1 bsdutils_1:2.35.2-9ubuntu1 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 coreutils_8.30-3ubuntu3 cpp_4:10.1.0-1ubuntu1 cpp-10_10.2.0-3ubuntu1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2ubuntu1 debianutils_4.11 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3build1 dpkg_1.19.7ubuntu4 dpkg-dev_1.19.7ubuntu4 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.24-1 file_1:5.38-5 findutils_4.7.0-1ubuntu1 g++_4:10.1.0-1ubuntu1 g++-10_10.2.0-3ubuntu1 gcc_4:10.1.0-1ubuntu1 gcc-10_10.2.0-3ubuntu1 gcc-10-base_10.2.0-3ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 init_1.58 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_2.13.3-7ubuntu6 libapt-pkg6.0_2.1.7 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.0-3ubuntu1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-3ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu6 libaudit1_1:2.8.5-2ubuntu6 libbinutils_2.35-1ubuntu1 libblkid1_2.35.2-9ubuntu1 libbz2-1.0_1.0.8-4ubuntu2 libc-bin_2.31-0ubuntu10 libc-dev-bin_2.31-0ubuntu10 libc6_2.31-0ubuntu10 libc6-dev_2.31-0ubuntu10 libcap-ng0_0.7.9-2.2 libcap2_1:2.36-1 libcc1-0_10.2.0-3ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1ubuntu1 libcrypt1_1:4.4.16-1ubuntu1 libcryptsetup12_2:2.3.3-1ubuntu3 libctf-nobfd0_2.35-1ubuntu1 libctf0_2.35-1ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu2 libdebconfclient0_0.252ubuntu1 libdebhelper-perl_13.2ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu3 libdpkg-perl_1.19.7ubuntu4 libelf1_0.180-0ubuntu1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.24-1 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-3ubuntu1 libgcc-s1_10.2.0-3ubuntu1 libgcrypt20_1.8.5-5ubuntu2 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.13-4ubuntu4 libgomp1_10.2.0-3ubuntu1 libgpg-error0_1.38-2 libhogweed6_3.6-2 libicu66_66.1-2ubuntu3 libidn2-0_2.3.0-1 libip4tc2_1.8.4-3ubuntu2 libisl22_0.22.1-1 libitm1_10.2.0-3ubuntu1 libjson-c4_0.13.1+dfsg-9 libkmod2_27+20200310-2ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.2.0-3ubuntu1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.2-9ubuntu1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1build1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle8_3.6-2 libnpth0_1.6-2 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu5 libpam-modules-bin_1.3.1-5ubuntu5 libpam-runtime_1.3.1-5ubuntu5 libpam0g_1.3.1-5ubuntu5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2build1 libpng16-16_1.6.37-2 libprocps8_2:3.3.16-5ubuntu1 libreadline8_8.0-4 libseccomp2_2.4.3-1ubuntu4 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsimde-dev_0.0.0.git.20200424-1 libsmartcols1_2.35.2-9ubuntu1 libsqlite3-0_3.32.3-1 libss2_1.45.6-1ubuntu1 libssl1.1_1.1.1f-1ubuntu3 libstdc++-10-dev_10.2.0-3ubuntu1 libstdc++6_10.2.0-3ubuntu1 libsub-override-perl_0.09-2 libsystemd0_245.6-3ubuntu3 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.2.0-3ubuntu1 libubsan1_10.2.0-3ubuntu1 libuchardet0_0.0.7-1 libudev1_245.6-3ubuntu3 libunistring2_0.9.10-4 libuuid1_2.35.2-9ubuntu1 libxml2_2.9.10+dfsg-5 libzstd1_1.4.5+dfsg-3 linux-libc-dev_5.4.0-42.46 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu6 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.35.2-9ubuntu1 ncurses-base_6.2-1 ncurses-bin_6.2-1 openssl_1.1.1f-1ubuntu3 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu6 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4build1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu1 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-kalign-dummy_0.invalid.0 sed_4.7-1build1 sensible-utils_0.0.12+nmu1 systemd_245.6-3ubuntu3 systemd-sysv_245.6-3ubuntu3 systemd-timesyncd_245.6-3ubuntu3 sysvinit-utils_2.96-3ubuntu1 tar_1.30+dfsg-7 tzdata_2020a-0ubuntu1 ubuntu-keyring_2020.06.17.1 util-linux_2.35.2-9ubuntu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Apr 20 17:14:17 2020 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kalign_3.2.3-3.dsc dpkg-source: info: extracting kalign in kalign-3.2.3 dpkg-source: info: unpacking kalign_3.2.3.orig.tar.gz dpkg-source: info: unpacking kalign_3.2.3-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying simde dpkg-source: info: applying no-native-build dpkg-source: info: applying hardening Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19682171 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19682171 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19682171 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package kalign dpkg-buildpackage: info: source version 1:3.2.3-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' configure.ac:6: installing './compile' configure.ac:15: installing './config.guess' configure.ac:15: installing './config.sub' configure.ac:7: installing './install-sh' configure.ac:7: installing './missing' src/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' dh_auto_configure -a ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of gcc... none checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking whether make supports nested variables... (cached) yes checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether C compiler accepts -D_FORTIFY_SOURCE=2... yes checking whether C compiler accepts -ffunction-sections... yes checking whether C compiler accepts -fdata-sections... yes checking whether C compiler accepts --gc-sections... no checking for OpenMP flag of C compiler... -fopenmp checking for gawk... (cached) mawk checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking for _Generic... yes checking for sqrt in -lm... yes checking for main in -lpthread... yes checking for library containing clock_gettime... none required checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking mach/mach.h usability... no checking mach/mach.h presence... no checking for mach/mach.h... no checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for inline... inline checking for size_t... yes checking for ssize_t... yes checking for int8_t... yes checking for int32_t... yes checking for int64_t... yes checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strnlen... yes checking for error_at_line... yes checking for gettimeofday... yes checking for pow... yes checking for realpath... yes checking for sqrt... yes checking for strstr... yes checking for memset... yes checking for clock_gettime... yes checking for gethrtime... no checking for gettimeofday... (cached) yes checking for valgrind... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating dev/Makefile config.status: creating src/config.h config.status: executing depfiles commands config.status: executing libtool commands configure: --------------------------------------------------------- configure: Configuration complete - kalign-3.2.3 configure: configure: General Information: configure: Version: 3.2.3 configure: Configured on: configure: Configured by: buildd configure: Host system: aarch64-unknown-linux-gnu configure: Uname information: configure: Installation point: /usr configure: SIMD flags: configure: --------------------------------------------------------- debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j4 make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' make all-am make[4]: Entering directory '/<>/src' gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o tldevel.o tldevel.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o esl_stopwatch.o esl_stopwatch.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o time_and_score_aln.o time_and_score_aln.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o parameters.o parameters.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o alphabet.o alphabet.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o rwalign.o rwalign.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o misc.o misc.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o run_kalign.o run_kalign.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o rng.o rng.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o aln_data.o aln_data.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o alignment_parameters.o alignment_parameters.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o pick_anchor.o pick_anchor.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o bisectingKmeans.o bisectingKmeans.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o sequence_distance.o sequence_distance.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o euclidean_dist.o euclidean_dist.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o alignment.o alignment.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o weave_alignment.o weave_alignment.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -c -o bpm.o bpm.c /bin/bash ../libtool --tag=CC --mode=link gcc -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -Wl,--gc-sections -Wl,--as-needed -Wno-undef -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o timescorealn tldevel.o esl_stopwatch.o time_and_score_aln.o parameters.o alphabet.o rwalign.o misc.o -lpthread -lm libtool: link: gcc -fopenmp -O3 -std=gnu11 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_FORTIFY_SOURCE=2 -ffunction-sections -fdata-sections -Wl,--gc-sections -Wl,--as-needed -Wno-undef -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o timescorealn tldevel.o esl_stopwatch.o time_and_score_aln.o parameters.o alphabet.o rwalign.o misc.o -lpthread -lm -fopenmp /usr/bin/ld: esl_stopwatch.o:./src/tldevel.h:567: multiple definition of `logsum_lookup'; tldevel.o:./src/tldevel.h:567: first defined here /usr/bin/ld: time_and_score_aln.o:./src/tldevel.h:567: multiple definition of `logsum_lookup'; tldevel.o:./src/tldevel.h:567: first defined here /usr/bin/ld: parameters.o:./src/tldevel.h:567: multiple definition of `logsum_lookup'; tldevel.o:./src/tldevel.h:567: first defined here /usr/bin/ld: alphabet.o:./src/tldevel.h:567: multiple definition of `logsum_lookup'; tldevel.o:./src/tldevel.h:567: first defined here /usr/bin/ld: rwalign.o:./src/tldevel.h:567: multiple definition of `logsum_lookup'; tldevel.o:./src/tldevel.h:567: first defined here /usr/bin/ld: misc.o:./src/tldevel.h:567: multiple definition of `logsum_lookup'; tldevel.o:./src/tldevel.h:567: first defined here collect2: error: ld returned 1 exit status make[4]: *** [Makefile:854: timescorealn] Error 1 make[4]: *** Waiting for unfinished jobs.... make[4]: Leaving directory '/<>/src' make[3]: *** [Makefile:717: all] Error 2 make[3]: Leaving directory '/<>/src' make[2]: *** [Makefile:411: all-recursive] Error 1 make[2]: Leaving directory '/<>' dh_auto_build: error: make -j4 returned exit code 2 make[1]: *** [debian/rules:45: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:13: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20200802-2130 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 8728 Build-Time: 41 Distribution: groovy Fail-Stage: build Host Architecture: arm64 Install-Time: 17 Job: kalign_3.2.3-3.dsc Machine Architecture: arm64 Package: kalign Package-Time: 60 Source-Version: 1:3.2.3-3 Space: 8728 Status: attempted Version: 1:3.2.3-3 -------------------------------------------------------------------------------- Finished at 20200802-2130 Build needed 00:01:00, 8728k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19682171 Scanning for processes to kill in build PACKAGEBUILD-19682171