https://launchpad.net/ubuntu/+archive/test-rebuild-20200925-groovy/+build/20007847 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-ppc64el-015 4.15.0-118-generic #119-Ubuntu SMP Tue Sep 8 12:20:10 UTC 2020 ppc64le Buildd toolchain package versions: launchpad-buildd_193~468~ubuntu18.04.1 python3-lpbuildd_193~468~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 30 Sep 10:20:47 ntpdate[1893]: adjust time server 10.211.37.1 offset -0.000149 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-20007847 --image-type chroot /home/buildd/filecache-default/fc8631117105b334ecbd8c05d268ae6e4d2edb33 Creating target for build PACKAGEBUILD-20007847 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-20007847 Starting target for build PACKAGEBUILD-20007847 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-20007847 'deb http://ftpmaster.internal/ubuntu groovy main universe' Overriding sources.list in build-PACKAGEBUILD-20007847 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-20007847 Updating target for build PACKAGEBUILD-20007847 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main ppc64el Packages [1334 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main Translation-en [507 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/universe ppc64el Packages [12.7 MB] Get:5 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5260 kB] Fetched 20.0 MB in 4s (5501 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libffi7 libjson-c4 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libffi8ubuntu1 libgssapi-krb5-2 libjson-c5 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libnsl-dev libnsl2 libnss-nis libnss-nisplus libtirpc-common libtirpc-dev libtirpc3 rpcsvc-proto The following packages will be upgraded: apt base-files binutils binutils-common binutils-powerpc64le-linux-gnu bsdutils build-essential ca-certificates coreutils cpp cpp-10 debianutils dpkg dpkg-dev g++ g++-10 gcc gcc-10 gcc-10-base libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap2 libcc1-0 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdpkg-perl libgcc-10-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgmp10 libgnutls30 libgomp1 libip4tc2 libitm1 liblsan0 liblzma5 libmount1 libmpc3 libmpfr6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpng16-16 libquadmath0 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libssl1.1 libstdc++-10-dev libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev mount openssl sensible-utils systemd systemd-sysv systemd-timesyncd util-linux xz-utils zlib1g 83 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. Need to get 66.4 MB of archives. After this operation, 4639 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy/main ppc64el libkrb5support0 ppc64el 1.17-10 [34.7 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main ppc64el libk5crypto3 ppc64el 1.17-10 [102 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main ppc64el libkeyutils1 ppc64el 1.6.1-2ubuntu1 [11.3 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main ppc64el libssl1.1 ppc64el 1.1.1f-1ubuntu4 [1364 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main ppc64el libkrb5-3 ppc64el 1.17-10 [371 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgssapi-krb5-2 ppc64el 1.17-10 [135 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtirpc-common all 1.2.6-1build1 [7472 B] Get:8 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtirpc3 ppc64el 1.2.6-1build1 [89.5 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnsl2 ppc64el 1.3.0-0ubuntu3 [43.9 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnss-nis ppc64el 3.1-0ubuntu4 [28.2 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnss-nisplus ppc64el 1.3-0ubuntu4 [24.9 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main ppc64el libc6 ppc64el 2.32-0ubuntu3 [2678 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main ppc64el libc-dev-bin ppc64el 2.32-0ubuntu3 [31.5 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main ppc64el libc6-dev ppc64el 2.32-0ubuntu3 [2131 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu3 [66.5 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtirpc-dev ppc64el 1.2.6-1build1 [208 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnsl-dev ppc64el 1.3.0-0ubuntu3 [73.4 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main ppc64el libc-bin ppc64el 2.32-0ubuntu3 [629 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main ppc64el linux-libc-dev ppc64el 5.8.0-20.21 [1150 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcc1-0 ppc64el 10.2.0-11ubuntu1 [41.8 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main ppc64el libctf0 ppc64el 2.35.1-1ubuntu1 [53.6 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main ppc64el libctf-nobfd0 ppc64el 2.35.1-1ubuntu1 [54.2 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.35.1-1ubuntu1 [1799 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main ppc64el libbinutils ppc64el 2.35.1-1ubuntu1 [529 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main ppc64el binutils-common ppc64el 2.35.1-1ubuntu1 [212 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main ppc64el binutils ppc64el 2.35.1-1ubuntu1 [3376 B] Get:27 http://ftpmaster.internal/ubuntu groovy/main ppc64el gcc-10-base ppc64el 10.2.0-11ubuntu1 [19.5 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgcc-s1 ppc64el 10.2.0-11ubuntu1 [30.0 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgomp1 ppc64el 10.2.0-11ubuntu1 [108 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main ppc64el libitm1 ppc64el 10.2.0-11ubuntu1 [28.5 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main ppc64el libatomic1 ppc64el 10.2.0-11ubuntu1 [9988 B] Get:32 http://ftpmaster.internal/ubuntu groovy/main ppc64el libasan6 ppc64el 10.2.0-11ubuntu1 [352 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblsan0 ppc64el 10.2.0-11ubuntu1 [155 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtsan0 ppc64el 10.2.0-11ubuntu1 [325 kB] Get:35 http://ftpmaster.internal/ubuntu groovy/main ppc64el libubsan1 ppc64el 10.2.0-11ubuntu1 [148 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main ppc64el libquadmath0 ppc64el 10.2.0-11ubuntu1 [149 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main ppc64el g++-10 ppc64el 10.2.0-11ubuntu1 [8449 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main ppc64el libstdc++-10-dev ppc64el 10.2.0-11ubuntu1 [1788 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgcc-10-dev ppc64el 10.2.0-11ubuntu1 [1244 kB] Get:40 http://ftpmaster.internal/ubuntu groovy/main ppc64el gcc-10 ppc64el 10.2.0-11ubuntu1 [15.1 MB] Get:41 http://ftpmaster.internal/ubuntu groovy/main ppc64el cpp-10 ppc64el 10.2.0-11ubuntu1 [7448 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main ppc64el libstdc++6 ppc64el 10.2.0-11ubuntu1 [541 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main ppc64el zlib1g ppc64el 1:1.2.11.dfsg-2ubuntu2 [62.5 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgmp10 ppc64el 2:6.2.0+dfsg-6ubuntu1 [245 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmpfr6 ppc64el 4.1.0-3 [300 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmpc3 ppc64el 1.2.0~rc1-1 [47.3 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main ppc64el libzstd1 ppc64el 1.4.5+dfsg-4 [324 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main ppc64el base-files ppc64el 11ubuntu13 [60.6 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main ppc64el bsdutils ppc64el 1:2.36-3ubuntu1 [92.0 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main ppc64el libselinux1 ppc64el 3.1-2 [81.8 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main ppc64el coreutils ppc64el 8.32-3ubuntu1 [1411 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main ppc64el debianutils ppc64el 4.11.1 [86.2 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main ppc64el dpkg ppc64el 1.20.5ubuntu2 [1198 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main ppc64el util-linux ppc64el 2.36-3ubuntu1 [1115 kB] Get:55 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblzma5 ppc64el 5.2.4-1ubuntu1 [107 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/main ppc64el libffi8ubuntu1 ppc64el 3.4~20200819gead65ca871-0ubuntu3 [21.6 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main ppc64el libp11-kit0 ppc64el 0.23.21-2build1 [202 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgnutls30 ppc64el 3.6.15-4ubuntu2 [754 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main ppc64el systemd-sysv ppc64el 246.6-1ubuntu1 [10.3 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main ppc64el systemd-timesyncd ppc64el 246.6-1ubuntu1 [28.8 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main ppc64el libapparmor1 ppc64el 3.0.0~beta1-0ubuntu6 [40.5 kB] Get:62 http://ftpmaster.internal/ubuntu groovy/main ppc64el libaudit-common all 1:2.8.5-3ubuntu1 [4076 B] Get:63 http://ftpmaster.internal/ubuntu groovy/main ppc64el libaudit1 ppc64el 1:2.8.5-3ubuntu1 [42.5 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcap2 ppc64el 1:2.43-1 [20.3 kB] Get:65 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjson-c5 ppc64el 0.15-1 [35.5 kB] Get:66 http://ftpmaster.internal/ubuntu groovy/main ppc64el libblkid1 ppc64el 2.36-3ubuntu1 [154 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/main ppc64el libuuid1 ppc64el 2.36-3ubuntu1 [23.3 kB] Get:68 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcryptsetup12 ppc64el 2:2.3.3-1ubuntu6 [227 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/main ppc64el libip4tc2 ppc64el 1.8.5-3ubuntu1 [22.4 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmount1 ppc64el 2.36-3ubuntu1 [169 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpam0g ppc64el 1.3.1-5ubuntu6 [61.5 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main ppc64el mount ppc64el 2.36-3ubuntu1 [128 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/main ppc64el systemd ppc64el 246.6-1ubuntu1 [4893 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsystemd0 ppc64el 246.6-1ubuntu1 [315 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/main ppc64el libudev1 ppc64el 246.6-1ubuntu1 [82.5 kB] Get:76 http://ftpmaster.internal/ubuntu groovy/main ppc64el libapt-pkg6.0 ppc64el 2.1.10 [927 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/main ppc64el apt ppc64el 2.1.10 [1319 kB] Get:78 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpam-modules-bin ppc64el 1.3.1-5ubuntu6 [43.9 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpam-modules ppc64el 1.3.1-5ubuntu6 [281 kB] Get:80 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdb5.3 ppc64el 5.3.28+dfsg1-0.6ubuntu3 [719 kB] Get:81 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpam-runtime all 1.3.1-5ubuntu6 [37.3 kB] Get:82 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsemanage-common all 3.1-1 [10.2 kB] Get:83 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsemanage1 ppc64el 3.1-1 [97.2 kB] Get:84 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsmartcols1 ppc64el 2.36-3ubuntu1 [110 kB] Get:85 http://ftpmaster.internal/ubuntu groovy/main ppc64el sensible-utils all 0.0.13 [15.1 kB] Get:86 http://ftpmaster.internal/ubuntu groovy/main ppc64el openssl ppc64el 1.1.1f-1ubuntu4 [621 kB] Get:87 http://ftpmaster.internal/ubuntu groovy/main ppc64el ca-certificates all 20200601 [147 kB] Get:88 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsqlite3-0 ppc64el 3.33.0-1 [625 kB] Get:89 http://ftpmaster.internal/ubuntu groovy/main ppc64el xz-utils ppc64el 5.2.4-1ubuntu1 [86.2 kB] Get:90 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgdbm6 ppc64el 1.18.1-5.1 [31.1 kB] Get:91 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpng16-16 ppc64el 1.6.37-3 [212 kB] Get:92 http://ftpmaster.internal/ubuntu groovy/main ppc64el g++ ppc64el 4:10.2.0-1ubuntu1 [1600 B] Get:93 http://ftpmaster.internal/ubuntu groovy/main ppc64el gcc ppc64el 4:10.2.0-1ubuntu1 [5228 B] Get:94 http://ftpmaster.internal/ubuntu groovy/main ppc64el cpp ppc64el 4:10.2.0-1ubuntu1 [27.7 kB] Get:95 http://ftpmaster.internal/ubuntu groovy/main ppc64el dpkg-dev all 1.20.5ubuntu2 [758 kB] Get:96 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdpkg-perl all 1.20.5ubuntu2 [232 kB] Get:97 http://ftpmaster.internal/ubuntu groovy/main ppc64el build-essential ppc64el 12.8ubuntu3 [4640 B] Get:98 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgdbm-compat4 ppc64el 1.18.1-5.1 [6684 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 66.4 MB in 1s (54.6 MB/s) Selecting previously unselected package libkrb5support0:ppc64el. (Reading database ... 12727 files and directories currently installed.) Preparing to unpack .../libkrb5support0_1.17-10_ppc64el.deb ... Unpacking libkrb5support0:ppc64el (1.17-10) ... Setting up libkrb5support0:ppc64el (1.17-10) ... Selecting previously unselected package libk5crypto3:ppc64el. (Reading database ... 12732 files and directories currently installed.) Preparing to unpack .../libk5crypto3_1.17-10_ppc64el.deb ... Unpacking libk5crypto3:ppc64el (1.17-10) ... Setting up libk5crypto3:ppc64el (1.17-10) ... Selecting previously unselected package libkeyutils1:ppc64el. (Reading database ... 12737 files and directories currently installed.) Preparing to unpack .../libkeyutils1_1.6.1-2ubuntu1_ppc64el.deb ... Unpacking libkeyutils1:ppc64el (1.6.1-2ubuntu1) ... Setting up libkeyutils1:ppc64el (1.6.1-2ubuntu1) ... (Reading database ... 12742 files and directories currently installed.) Preparing to unpack .../libssl1.1_1.1.1f-1ubuntu4_ppc64el.deb ... Unpacking libssl1.1:ppc64el (1.1.1f-1ubuntu4) over (1.1.1f-1ubuntu3) ... Setting up libssl1.1:ppc64el (1.1.1f-1ubuntu4) ... Selecting previously unselected package libkrb5-3:ppc64el. (Reading database ... 12742 files and directories currently installed.) Preparing to unpack .../libkrb5-3_1.17-10_ppc64el.deb ... Unpacking libkrb5-3:ppc64el (1.17-10) ... Setting up libkrb5-3:ppc64el (1.17-10) ... Selecting previously unselected package libgssapi-krb5-2:ppc64el. (Reading database ... 12755 files and directories currently installed.) Preparing to unpack .../libgssapi-krb5-2_1.17-10_ppc64el.deb ... Unpacking libgssapi-krb5-2:ppc64el (1.17-10) ... Setting up libgssapi-krb5-2:ppc64el (1.17-10) ... Selecting previously unselected package libtirpc-common. (Reading database ... 12763 files and directories currently installed.) Preparing to unpack .../libtirpc-common_1.2.6-1build1_all.deb ... Unpacking libtirpc-common (1.2.6-1build1) ... Setting up libtirpc-common (1.2.6-1build1) ... Selecting previously unselected package libtirpc3:ppc64el. (Reading database ... 12768 files and directories currently installed.) Preparing to unpack .../libtirpc3_1.2.6-1build1_ppc64el.deb ... Unpacking libtirpc3:ppc64el (1.2.6-1build1) ... Setting up libtirpc3:ppc64el (1.2.6-1build1) ... Selecting previously unselected package libnsl2:ppc64el. (Reading database ... 12773 files and directories currently installed.) Preparing to unpack .../libnsl2_1.3.0-0ubuntu3_ppc64el.deb ... Unpacking libnsl2:ppc64el (1.3.0-0ubuntu3) ... Setting up libnsl2:ppc64el (1.3.0-0ubuntu3) ... (Reading database ... 12778 files and directories currently installed.) Preparing to unpack .../libc6_2.32-0ubuntu3_ppc64el.deb ... Unpacking libc6:ppc64el (2.32-0ubuntu3) over (2.31-0ubuntu10) ... Selecting previously unselected package libnss-nis:ppc64el. Preparing to unpack .../libnss-nis_3.1-0ubuntu4_ppc64el.deb ... Unpacking libnss-nis:ppc64el (3.1-0ubuntu4) ... Selecting previously unselected package libnss-nisplus:ppc64el. Preparing to unpack .../libnss-nisplus_1.3-0ubuntu4_ppc64el.deb ... Unpacking libnss-nisplus:ppc64el (1.3-0ubuntu4) ... Setting up libnss-nis:ppc64el (3.1-0ubuntu4) ... Setting up libnss-nisplus:ppc64el (1.3-0ubuntu4) ... Setting up libc6:ppc64el (2.32-0ubuntu3) ... (Reading database ... 12786 files and directories currently installed.) Preparing to unpack .../0-libc-dev-bin_2.32-0ubuntu3_ppc64el.deb ... Unpacking libc-dev-bin (2.32-0ubuntu3) over (2.31-0ubuntu10) ... Preparing to unpack .../1-libc6-dev_2.32-0ubuntu3_ppc64el.deb ... Unpacking libc6-dev:ppc64el (2.32-0ubuntu3) over (2.31-0ubuntu10) ... Selecting previously unselected package rpcsvc-proto. Preparing to unpack .../2-rpcsvc-proto_1.4.2-0ubuntu3_ppc64el.deb ... Unpacking rpcsvc-proto (1.4.2-0ubuntu3) ... Selecting previously unselected package libtirpc-dev:ppc64el. Preparing to unpack .../3-libtirpc-dev_1.2.6-1build1_ppc64el.deb ... Unpacking libtirpc-dev:ppc64el (1.2.6-1build1) ... Selecting previously unselected package libnsl-dev:ppc64el. Preparing to unpack .../4-libnsl-dev_1.3.0-0ubuntu3_ppc64el.deb ... Unpacking libnsl-dev:ppc64el (1.3.0-0ubuntu3) ... Preparing to unpack .../5-libc-bin_2.32-0ubuntu3_ppc64el.deb ... Unpacking libc-bin (2.32-0ubuntu3) over (2.31-0ubuntu10) ... Setting up libc-bin (2.32-0ubuntu3) ... (Reading database ... 12851 files and directories currently installed.) Preparing to unpack .../0-linux-libc-dev_5.8.0-20.21_ppc64el.deb ... Unpacking linux-libc-dev:ppc64el (5.8.0-20.21) over (5.4.0-42.46) ... Preparing to unpack .../1-libcc1-0_10.2.0-11ubuntu1_ppc64el.deb ... Unpacking libcc1-0:ppc64el (10.2.0-11ubuntu1) over (10.2.0-3ubuntu1) ... Preparing to unpack .../2-libctf0_2.35.1-1ubuntu1_ppc64el.deb ... Unpacking libctf0:ppc64el (2.35.1-1ubuntu1) over (2.35-1ubuntu1) ... Preparing to unpack .../3-libctf-nobfd0_2.35.1-1ubuntu1_ppc64el.deb ... 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Setting up ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 13 added, 14 removed; done. Setting up libgdbm-compat4:ppc64el (1.18.1-5.1) ... Setting up cpp (4:10.2.0-1ubuntu1) ... Setting up libc6-dev:ppc64el (2.32-0ubuntu3) ... Setting up libcryptsetup12:ppc64el (2:2.3.3-1ubuntu6) ... Setting up binutils-powerpc64le-linux-gnu (2.35.1-1ubuntu1) ... Setting up libstdc++-10-dev:ppc64el (10.2.0-11ubuntu1) ... Setting up binutils (2.35.1-1ubuntu1) ... Setting up dpkg-dev (1.20.5ubuntu2) ... Setting up gcc-10 (10.2.0-11ubuntu1) ... Setting up g++-10 (10.2.0-11ubuntu1) ... Setting up gcc (4:10.2.0-1ubuntu1) ... Setting up g++ (4:10.2.0-1ubuntu1) ... Setting up build-essential (12.8ubuntu3) ... Setting up systemd (246.6-1ubuntu1) ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/resolved.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from random generator. Removing obsolete conffile /etc/dhcp/dhclient-enter-hooks.d/resolved ... Setting up systemd-timesyncd (246.6-1ubuntu1) ... Setting up systemd-sysv (246.6-1ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu3) ... Processing triggers for ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20007847 ppc64el groovy -c chroot:build-PACKAGEBUILD-20007847 --arch=ppc64el --dist=groovy --nolog kissplice_2.5.3-2.dsc Initiating build PACKAGEBUILD-20007847 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-118-generic #119-Ubuntu SMP Tue Sep 8 12:20:10 UTC 2020 ppc64le sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-ppc64el-015.buildd +==============================================================================+ | kissplice 2.5.3-2 (ppc64el) Wed, 30 Sep 2020 10:21:18 +0000 | +==============================================================================+ Package: kissplice Version: 2.5.3-2 Source Version: 2.5.3-2 Distribution: groovy Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20007847/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- kissplice_2.5.3-2.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/kissplice-zvxOiZ/kissplice-2.5.3' with '<>' I: NOTICE: Log filtering will replace 'build/kissplice-zvxOiZ' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-Ba6IeO/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-Ba6IeO/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Ba6IeO/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-Ba6IeO/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Ba6IeO/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-Ba6IeO/apt_archive ./ Packages [436 B] Fetched 1742 B in 0s (115 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi7 libjson-c4 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-Ba6IeO/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12979 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any-amd64 any-arm64 any-mips64 any-mips64el any-ia64 any-ppc64 any-ppc64el any-sparc64) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), dh-python, cmake, python3-dev, libpython3-stdlib, zlib1g-dev Filtered Build-Depends: debhelper-compat (= 12), dh-python, cmake, python3-dev, libpython3-stdlib, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-kissplice-dummy' in '/<>/resolver-Ba6IeO/apt_archive/sbuild-build-depends-kissplice-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-kissplice-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-Ba6IeO/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Ba6IeO/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-Ba6IeO/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Ba6IeO/apt_archive ./ Sources [528 B] Get:5 copy:/<>/resolver-Ba6IeO/apt_archive ./ Packages [612 B] Fetched 2103 B in 0s (131 kB/s) Reading package lists... Reading package lists... Install kissplice build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi7 libjson-c4 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasn1-8-heimdal libbrotli1 libcroco3 libcurl4 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libglib2.0-0 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libicu67 libjsoncpp1 libkrb5-26-heimdal libldap-2.4-2 libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libuv1 libwind0-heimdal libxml2 m4 man-db mime-support po-debconf python3 python3-dev python3-distutils python3-lib2to3 python3-minimal python3.8 python3.8-dev python3.8-minimal zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.8-venv python3.8-doc binfmt-support Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasn1-8-heimdal libbrotli1 libcroco3 libcurl4 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libglib2.0-0 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libicu67 libjsoncpp1 libkrb5-26-heimdal libldap-2.4-2 libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libuv1 libwind0-heimdal libxml2 m4 man-db mime-support po-debconf python3 python3-dev python3-distutils python3-lib2to3 python3-minimal python3.8 python3.8-dev python3.8-minimal sbuild-build-depends-kissplice-dummy zlib1g-dev 0 upgraded, 76 newly installed, 0 to remove and 0 not upgraded. Need to get 37.4 MB of archives. After this operation, 172 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Ba6IeO/apt_archive ./ sbuild-build-depends-kissplice-dummy 0.invalid.0 [900 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpython3.8-minimal ppc64el 3.8.6-1 [712 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main ppc64el libexpat1 ppc64el 2.2.9-1build1 [77.6 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main ppc64el python3.8-minimal ppc64el 3.8.6-1 [1755 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main ppc64el python3-minimal ppc64el 3.8.2-0ubuntu2 [23.6 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main ppc64el mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpython3.8-stdlib ppc64el 3.8.6-1 [1727 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main ppc64el python3.8 ppc64el 3.8.6-1 [376 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpython3-stdlib ppc64el 3.8.2-0ubuntu2 [7068 B] Get:10 http://ftpmaster.internal/ubuntu groovy/main ppc64el python3 ppc64el 3.8.2-0ubuntu2 [47.6 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main ppc64el bsdextrautils ppc64el 2.36-3ubuntu1 [83.7 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main ppc64el libuchardet0 ppc64el 0.0.7-1 [71.0 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main ppc64el groff-base ppc64el 1.22.4-5 [922 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpipeline1 ppc64el 1.5.3-1 [29.6 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main ppc64el man-db ppc64el 2.9.3-2 [1148 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmagic-mgc ppc64el 1:5.38-5 [218 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmagic1 ppc64el 1:5.38-5 [93.2 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main ppc64el file ppc64el 1:5.38-5 [24.2 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main ppc64el libelf1 ppc64el 0.181-1 [52.0 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglib2.0-0 ppc64el 2.66.0-2 [1405 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main ppc64el libicu67 ppc64el 67.1-4 [8812 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxml2 ppc64el 2.9.10+dfsg-5build1 [656 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main ppc64el gettext-base ppc64el 0.19.8.1-10build1 [52.5 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpsl5 ppc64el 0.21.0-1.1 [53.3 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main ppc64el libuv1 ppc64el 1.38.0-2ubuntu2 [89.1 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsigsegv2 ppc64el 2.12-2build1 [14.4 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main ppc64el m4 ppc64el 1.4.18-4 [210 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main ppc64el autoconf all 2.69-11.1 [321 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main ppc64el autotools-dev all 20180224.1 [39.6 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main ppc64el automake all 1:1.16.2-4ubuntu1 [548 kB] 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ppc64el libhx509-5-heimdal ppc64el 7.7.0+dfsg-2 [120 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/main ppc64el libkrb5-26-heimdal ppc64el 7.7.0+dfsg-2 [234 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main ppc64el libheimntlm0-heimdal ppc64el 7.7.0+dfsg-2 [17.4 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgssapi3-heimdal ppc64el 7.7.0+dfsg-2 [105 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsasl2-modules-db ppc64el 2.1.27+dfsg-2 [16.9 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsasl2-2 ppc64el 2.1.27+dfsg-2 [60.2 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main ppc64el libldap-2.4-2 ppc64el 2.4.53+dfsg-1ubuntu1 [178 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnghttp2-14 ppc64el 1.41.0-3 [78.1 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2build2 [59.2 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main ppc64el libssh-4 ppc64el 0.9.4-1ubuntu3 [195 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcurl4 ppc64el 7.68.0-1ubuntu4 [255 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjsoncpp1 ppc64el 1.7.4-3.1ubuntu2 [81.4 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main ppc64el librhash0 ppc64el 1.4.0-1 [120 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main ppc64el cmake ppc64el 3.16.3-3ubuntu2 [3676 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtool all 2.4.6-14 [161 kB] Get:55 http://ftpmaster.internal/ubuntu groovy/main ppc64el dh-autoreconf all 19 [16.1 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdebhelper-perl all 13.2.1ubuntu1 [63.6 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-override-perl all 0.09-2 [9532 B] Get:59 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main ppc64el dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:61 http://ftpmaster.internal/ubuntu groovy/main ppc64el dwz ppc64el 0.13-5 [136 kB] Get:62 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcroco3 ppc64el 0.6.13-1 [92.1 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main ppc64el gettext ppc64el 0.19.8.1-10build1 [959 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main ppc64el intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:65 http://ftpmaster.internal/ubuntu groovy/main ppc64el po-debconf all 1.0.21 [233 kB] Get:66 http://ftpmaster.internal/ubuntu groovy/main ppc64el debhelper all 13.2.1ubuntu1 [879 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/main ppc64el python3-lib2to3 all 3.8.5-1 [75.6 kB] Get:68 http://ftpmaster.internal/ubuntu groovy/main ppc64el python3-distutils all 3.8.5-1 [141 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/universe ppc64el dh-python all 4.20200925 [92.2 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/main ppc64el libexpat1-dev ppc64el 2.2.9-1build1 [121 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpython3.8 ppc64el 3.8.6-1 [1692 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpython3.8-dev ppc64el 3.8.6-1 [3980 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpython3-dev ppc64el 3.8.2-0ubuntu2 [7232 B] Get:74 http://ftpmaster.internal/ubuntu groovy/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-2ubuntu2 [166 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/main ppc64el python3.8-dev ppc64el 3.8.6-1 [515 kB] Get:76 http://ftpmaster.internal/ubuntu groovy/main ppc64el python3-dev ppc64el 3.8.2-0ubuntu2 [1216 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 37.4 MB in 1s (58.7 MB/s) Selecting previously unselected package libpython3.8-minimal:ppc64el. (Reading database ... 12979 files and directories currently installed.) Preparing to unpack .../libpython3.8-minimal_3.8.6-1_ppc64el.deb ... Unpacking libpython3.8-minimal:ppc64el (3.8.6-1) ... Selecting previously unselected package libexpat1:ppc64el. Preparing to unpack .../libexpat1_2.2.9-1build1_ppc64el.deb ... Unpacking libexpat1:ppc64el (2.2.9-1build1) ... Selecting previously unselected package python3.8-minimal. Preparing to unpack .../python3.8-minimal_3.8.6-1_ppc64el.deb ... Unpacking python3.8-minimal (3.8.6-1) ... Setting up libpython3.8-minimal:ppc64el (3.8.6-1) ... Setting up libexpat1:ppc64el (2.2.9-1build1) ... Setting up python3.8-minimal (3.8.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13270 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.8.2-0ubuntu2_ppc64el.deb ... Unpacking python3-minimal (3.8.2-0ubuntu2) ... Selecting previously unselected package mime-support. 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Setting up bsdextrautils (2.36-3ubuntu1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:ppc64el (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:ppc64el (2.66.0-2) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.2.1ubuntu1) ... Setting up libbrotli1:ppc64el (1.0.9-2) ... Setting up libnghttp2-14:ppc64el (1.41.0-3) ... Setting up libmagic1:ppc64el (1:5.38-5) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-5) ... Setting up libsasl2-modules-db:ppc64el (2.1.27+dfsg-2) ... Setting up autotools-dev (20180224.1) ... Setting up libuv1:ppc64el (1.38.0-2ubuntu2) ... Setting up libexpat1-dev:ppc64el (2.2.9-1build1) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2build2) ... Setting up libsigsegv2:ppc64el (2.12-2build1) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libsasl2-2:ppc64el (2.1.27+dfsg-2) ... Setting up libssh-4:ppc64el (0.9.4-1ubuntu3) ... Setting up libroken18-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-2ubuntu2) ... Setting up librhash0:ppc64el (1.4.0-1) ... Setting up libuchardet0:ppc64el (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up cmake-data (3.16.3-3ubuntu2) ... Setting up libpython3.8-stdlib:ppc64el (3.8.6-1) ... Setting up python3.8 (3.8.6-1) ... Setting up libelf1:ppc64el (0.181-1) ... Setting up libxml2:ppc64el (2.9.10+dfsg-5build1) ... Setting up libjsoncpp1:ppc64el (1.7.4-3.1ubuntu2) ... Setting up libpython3-stdlib:ppc64el (3.8.2-0ubuntu2) ... Setting up libheimbase1-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libtool (2.4.6-14) ... Setting up libarchive13:ppc64el (3.4.3-2) ... Setting up libasn1-8-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up m4 (1.4.18-4) ... Setting up python3 (3.8.2-0ubuntu2) ... Setting up libhcrypto4-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libwind0-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libpython3.8:ppc64el (3.8.6-1) ... Setting up libcroco3:ppc64el (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up python3-lib2to3 (3.8.5-1) ... Setting up automake (1:1.16.2-4ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3-distutils (3.8.5-1) ... Setting up dh-python (4.20200925) ... Setting up gettext (0.19.8.1-10build1) ... Setting up libhx509-5-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython3.8-dev:ppc64el (3.8.6-1) ... Setting up python3.8-dev (3.8.6-1) ... Setting up libkrb5-26-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libpython3-dev:ppc64el (3.8.2-0ubuntu2) ... Setting up po-debconf (1.0.21) ... Setting up libheimntlm0-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libgssapi3-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up python3-dev (3.8.2-0ubuntu2) ... Setting up libldap-2.4-2:ppc64el (2.4.53+dfsg-1ubuntu1) ... Setting up libcurl4:ppc64el (7.68.0-1ubuntu4) ... Setting up cmake (3.16.3-3ubuntu2) ... Setting up debhelper (13.2.1ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-kissplice-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-118-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.35.1-1ubuntu1 dpkg-dev_1.20.5ubuntu2 g++-10_10.2.0-11ubuntu1 gcc-10_10.2.0-11ubuntu1 libc6-dev_2.32-0ubuntu3 libstdc++-10-dev_10.2.0-11ubuntu1 libstdc++6_10.2.0-11ubuntu1 linux-libc-dev_5.8.0-20.21 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.10 autoconf_2.69-11.1 automake_1:1.16.2-4ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu13 base-passwd_3.5.47 bash_5.0-6ubuntu2 binutils_2.35.1-1ubuntu1 binutils-common_2.35.1-1ubuntu1 binutils-powerpc64le-linux-gnu_2.35.1-1ubuntu1 bsdextrautils_2.36-3ubuntu1 bsdutils_1:2.36-3ubuntu1 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 cmake_3.16.3-3ubuntu2 cmake-data_3.16.3-3ubuntu2 coreutils_8.32-3ubuntu1 cpp_4:10.2.0-1ubuntu1 cpp-10_10.2.0-11ubuntu1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1ubuntu1 debianutils_4.11.1 dh-autoreconf_19 dh-python_4.20200925 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3build1 dpkg_1.20.5ubuntu2 dpkg-dev_1.20.5ubuntu2 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.24-1 file_1:5.38-5 findutils_4.7.0-1ubuntu1 g++_4:10.2.0-1ubuntu1 g++-10_10.2.0-11ubuntu1 gcc_4:10.2.0-1ubuntu1 gcc-10_10.2.0-11ubuntu1 gcc-10-base_10.2.0-11ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 init_1.58 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_3.0.0~beta1-0ubuntu6 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.0-11ubuntu1 libasn1-8-heimdal_7.7.0+dfsg-2 libassuan0_2.5.3-7.1 libatomic1_10.2.0-11ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3ubuntu1 libaudit1_1:2.8.5-3ubuntu1 libbinutils_2.35.1-1ubuntu1 libblkid1_2.36-3ubuntu1 libbrotli1_1.0.9-2 libbz2-1.0_1.0.8-4ubuntu2 libc-bin_2.32-0ubuntu3 libc-dev-bin_2.32-0ubuntu3 libc6_2.32-0ubuntu3 libc6-dev_2.32-0ubuntu3 libcap-ng0_0.7.9-2.2 libcap2_1:2.43-1 libcc1-0_10.2.0-11ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1ubuntu1 libcrypt1_1:4.4.16-1ubuntu1 libcryptsetup12_2:2.3.3-1ubuntu6 libctf-nobfd0_2.35.1-1ubuntu1 libctf0_2.35.1-1ubuntu1 libcurl4_7.68.0-1ubuntu4 libdb5.3_5.3.28+dfsg1-0.6ubuntu3 libdebconfclient0_0.252ubuntu1 libdebhelper-perl_13.2.1ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu3 libdpkg-perl_1.20.5ubuntu2 libelf1_0.181-1 libexpat1_2.2.9-1build1 libexpat1-dev_2.2.9-1build1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.24-1 libffi7_3.3-4 libffi8ubuntu1_3.4~20200819gead65ca871-0ubuntu3 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-11ubuntu1 libgcc-s1_10.2.0-11ubuntu1 libgcrypt20_1.8.5-5ubuntu2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.0-2 libgmp10_2:6.2.0+dfsg-6ubuntu1 libgnutls30_3.6.15-4ubuntu2 libgomp1_10.2.0-11ubuntu1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libgssapi3-heimdal_7.7.0+dfsg-2 libhcrypto4-heimdal_7.7.0+dfsg-2 libheimbase1-heimdal_7.7.0+dfsg-2 libheimntlm0-heimdal_7.7.0+dfsg-2 libhogweed6_3.6-2 libhx509-5-heimdal_7.7.0+dfsg-2 libicu67_67.1-4 libidn2-0_2.3.0-1 libip4tc2_1.8.5-3ubuntu1 libisl22_0.22.1-1 libitm1_10.2.0-11ubuntu1 libjson-c4_0.13.1+dfsg-9 libjson-c5_0.15-1 libjsoncpp1_1.7.4-3.1ubuntu2 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-26-heimdal_7.7.0+dfsg-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 libldap-2.4-2_2.4.53+dfsg-1ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.2.0-11ubuntu1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3ubuntu1 libmpc3_1.2.0~rc1-1 libmpfr6_4.1.0-3 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-3 libnpth0_1.6-2 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libp11-kit0_0.23.21-2build1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5ubuntu1 libpsl5_0.21.0-1.1 libpython3-dev_3.8.2-0ubuntu2 libpython3-stdlib_3.8.2-0ubuntu2 libpython3.8_3.8.6-1 libpython3.8-dev_3.8.6-1 libpython3.8-minimal_3.8.6-1 libpython3.8-stdlib_3.8.6-1 libquadmath0_10.2.0-11ubuntu1 libreadline8_8.0-4 librhash0_1.4.0-1 libroken18-heimdal_7.7.0+dfsg-2 librtmp1_2.4+20151223.gitfa8646d.1-2build2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1ubuntu4 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsmartcols1_2.36-3ubuntu1 libsqlite3-0_3.33.0-1 libss2_1.45.6-1ubuntu1 libssh-4_0.9.4-1ubuntu3 libssl1.1_1.1.1f-1ubuntu4 libstdc++-10-dev_10.2.0-11ubuntu1 libstdc++6_10.2.0-11ubuntu1 libsub-override-perl_0.09-2 libsystemd0_246.6-1ubuntu1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtirpc-common_1.2.6-1build1 libtirpc-dev_1.2.6-1build1 libtirpc3_1.2.6-1build1 libtool_2.4.6-14 libtsan0_10.2.0-11ubuntu1 libubsan1_10.2.0-11ubuntu1 libuchardet0_0.0.7-1 libudev1_246.6-1ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36-3ubuntu1 libuv1_1.38.0-2ubuntu2 libwind0-heimdal_7.7.0+dfsg-2 libxml2_2.9.10+dfsg-5build1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.0-20.21 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu6 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mime-support_3.64ubuntu1 mount_2.36-3ubuntu1 ncurses-base_6.2-1 ncurses-bin_6.2-1 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+------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Jun 25 18:35:53 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kissplice_2.5.3-2.dsc dpkg-source: info: extracting kissplice in /<> dpkg-source: info: unpacking kissplice_2.5.3.orig.tar.gz dpkg-source: info: unpacking kissplice_2.5.3-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-bcalm-install.patch dpkg-source: info: applying tests-2to3.patch dpkg-source: info: applying spelling.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20007847 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20007847 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20007847 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package kissplice dpkg-buildpackage: info: source version 2.5.3-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean --with python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -rf bcalm/README.md tests/functional_tests/__pycache__/ tests/integration_tests/__pycache__/ make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch --with python3 dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DCMAKE_INSTALL_LIBEXECDIR=lib/ cd obj-powerpc64le-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/powerpc64le-linux-gnu -DCMAKE_INSTALL_LIBEXECDIR=lib/ .. -- The CXX compiler identification is GNU 10.2.0 -- The C compiler identification is GNU 10.2.0 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Found ZLIB: /usr/lib/powerpc64le-linux-gnu/libz.so (found version "1.2.11") -- gatb-core is here '/<>/bcalm/gatb-core/gatb-core' -- CppUnit NOT FOUND -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed -- Check size of __uint128_t -- Check size of __uint128_t - done -- Options: -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-format -Wno-unknown-pragmas -Wno-invalid-offsetof -- OPTIMIZED KMER SIZES INTERVALS ARE 32 64 96 128 <-- max supported kmer size without recompilation -- SOVERSION: 10.2.1 -- SOVERSION_TOOLS: 10.0.4 -- SOVERSION_CXX: 13.0.0 -- SOVERSION_F: 10.0.4 -- SOVERSION_HL: 10.1.1 -- SOVERSION_HL_CXX: 11.1.0 -- SOVERSION_HL_F: 10.0.3 -- Check for STD namespace -- Check for STD namespace - found -- Looking for ceil in m; -- Looking for ceil in m; - found -- Looking for dlopen in dl;m -- Looking for dlopen in dl;m - found -- Looking for WSAStartup in ws2_32;m;dl -- Looking for WSAStartup in ws2_32;m;dl - not found -- Looking for gethostbyname in wsock32;m;dl -- Looking for gethostbyname in wsock32;m;dl - not found -- Looking for gethostname in ucb;m;dl -- Looking for gethostname in ucb;m;dl - not found -- Check if the system is big endian -- Searching 16 bit integer -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Performing Other Test STDC_HEADERS - Success CMake Warning (dev) at /usr/share/cmake-3.16/Modules/CheckIncludeFiles.cmake:120 (message): Policy CMP0075 is not set: Include file check macros honor CMAKE_REQUIRED_LIBRARIES. Run "cmake --help-policy CMP0075" for policy details. Use the cmake_policy command to set the policy and suppress this warning. CMAKE_REQUIRED_LIBRARIES is set to: m;dl For compatibility with CMake 3.11 and below this check is ignoring it. Call Stack (most recent call first): bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:192 (CHECK_INCLUDE_FILES) bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:201 (CHECK_INCLUDE_FILE_CONCAT) bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/ConfigureChecks.cmake:5 (include) bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:383 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Looking for include file sys/resource.h -- Looking for include file sys/resource.h - found -- Looking for include files sys/resource.h, sys/time.h -- Looking for include files sys/resource.h, sys/time.h - found -- Looking for 3 include files sys/resource.h, ..., unistd.h -- Looking for 3 include files sys/resource.h, ..., unistd.h - found -- Looking for 4 include files sys/resource.h, ..., sys/ioctl.h -- Looking for 4 include files sys/resource.h, ..., sys/ioctl.h - found -- Looking for 5 include files sys/resource.h, ..., sys/stat.h -- Looking for 5 include files sys/resource.h, ..., sys/stat.h - found -- Looking for 6 include files sys/resource.h, ..., sys/socket.h -- Looking for 6 include files sys/resource.h, ..., sys/socket.h - found -- Looking for 7 include files sys/resource.h, ..., sys/types.h -- Looking for 7 include files sys/resource.h, ..., sys/types.h - found -- Looking for 8 include files sys/resource.h, ..., stddef.h -- Looking for 8 include files sys/resource.h, ..., stddef.h - found -- Looking for 9 include files sys/resource.h, ..., setjmp.h -- Looking for 9 include files sys/resource.h, ..., setjmp.h - found -- Looking for 10 include files sys/resource.h, ..., features.h -- Looking for 10 include files sys/resource.h, ..., features.h - found -- Looking for 11 include files sys/resource.h, ..., dirent.h -- Looking for 11 include files sys/resource.h, ..., dirent.h - found -- Looking for 12 include files sys/resource.h, ..., stdint.h -- Looking for 12 include files sys/resource.h, ..., stdint.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for 13 include files sys/resource.h, ..., mach/mach_time.h -- Looking for 13 include files sys/resource.h, ..., mach/mach_time.h - not found -- Looking for 13 include files sys/resource.h, ..., io.h -- Looking for 13 include files sys/resource.h, ..., io.h - not found -- Looking for 13 include files sys/resource.h, ..., winsock2.h -- Looking for 13 include files sys/resource.h, ..., winsock2.h - not found -- Looking for 13 include files sys/resource.h, ..., sys/timeb.h -- Looking for 13 include files sys/resource.h, ..., sys/timeb.h - found -- Looking for 14 include files sys/resource.h, ..., globus/common.h -- Looking for 14 include files sys/resource.h, ..., globus/common.h - not found -- Looking for 14 include files sys/resource.h, ..., pdb.h -- Looking for 14 include files sys/resource.h, ..., pdb.h - not found -- Looking for 14 include files sys/resource.h, ..., pthread.h -- Looking for 14 include files sys/resource.h, ..., pthread.h - found -- Looking for 15 include files sys/resource.h, ..., srbclient.h -- Looking for 15 include files sys/resource.h, ..., srbclient.h - not found -- Looking for 15 include files sys/resource.h, ..., string.h -- Looking for 15 include files sys/resource.h, ..., string.h - found -- Looking for 16 include files sys/resource.h, ..., strings.h -- Looking for 16 include files sys/resource.h, ..., strings.h - found -- Looking for 17 include files sys/resource.h, ..., stdlib.h -- Looking for 17 include files sys/resource.h, ..., stdlib.h - found -- Looking for 18 include files sys/resource.h, ..., memory.h -- Looking for 18 include files sys/resource.h, ..., memory.h - found -- Looking for 19 include files sys/resource.h, ..., dlfcn.h -- Looking for 19 include files sys/resource.h, ..., dlfcn.h - found -- Looking for 20 include files sys/resource.h, ..., inttypes.h -- Looking for 20 include files sys/resource.h, ..., inttypes.h - found -- Looking for 21 include files sys/resource.h, ..., netinet/in.h -- Looking for 21 include files sys/resource.h, ..., netinet/in.h - found -- Performing TEST_LFS_WORKS... yes -- Performing Other Test HAVE_OFF64_T - Success -- Looking for lseek64 -- Looking for lseek64 - found -- Looking for fseeko64 -- Looking for fseeko64 - found -- Looking for ftello64 -- Looking for ftello64 - found -- Looking for ftruncate64 -- Looking for ftruncate64 - found -- Looking for fseeko -- Looking for fseeko - found -- Looking for ftello -- Looking for ftello - found -- Performing Other Test HAVE_STAT64_STRUCT - Success -- Looking for fstat64 -- Looking for fstat64 - found -- Looking for stat64 -- Looking for stat64 - found -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of unsigned -- Check size of unsigned - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of __int64 -- Check size of __int64 - failed -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Check size of long double -- Check size of long double - done -- Check size of int8_t -- Check size of int8_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of int_least8_t -- Check size of int_least8_t - done -- Check size of uint_least8_t -- Check size of uint_least8_t - done -- Check size of int_fast8_t -- Check size of int_fast8_t - done -- Check size of uint_fast8_t -- Check size of uint_fast8_t - done -- Check size of int16_t -- Check size of int16_t - done -- Check size of uint16_t -- Check size of uint16_t - done -- Check size of int_least16_t -- Check size of int_least16_t - done -- Check size of uint_least16_t -- Check size of uint_least16_t - done -- Check size of int_fast16_t -- Check size of int_fast16_t - done -- Check size of uint_fast16_t -- Check size of uint_fast16_t - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of int_least32_t -- Check size of int_least32_t - done -- Check size of uint_least32_t -- Check size of uint_least32_t - done -- Check size of int_fast32_t -- Check size of int_fast32_t - done -- Check size of uint_fast32_t -- Check size of uint_fast32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Check size of int_least64_t -- Check size of int_least64_t - done -- Check size of uint_least64_t -- Check size of uint_least64_t - done -- Check size of int_fast64_t -- Check size of int_fast64_t - done -- Check size of uint_fast64_t -- Check size of uint_fast64_t - done -- Check size of size_t -- Check size of size_t - done -- Check size of ssize_t -- Check size of ssize_t - done -- Check size of ptrdiff_t -- Check size of ptrdiff_t - done -- Check size of off_t -- Check size of off_t - done -- Check size of off64_t -- Check size of off64_t - done -- Looking for 22 include files sys/resource.h, ..., stdbool.h -- Looking for 22 include files sys/resource.h, ..., stdbool.h - found -- Check size of _Bool -- Check size of _Bool - done -- Performing Other Test DEV_T_IS_SCALAR - Success -- Looking for CLOCK_MONOTONIC -- Looking for CLOCK_MONOTONIC - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Performing Other Test HAVE_TM_GMTOFF - Success -- Performing Other Test HAVE___TM_GMTOFF - Failed -- Performing Other Test HAVE_STRUCT_TIMEZONE - Success -- Performing Other Test GETTIMEOFDAY_GIVES_TZ - Success -- Performing Other Test TIME_WITH_SYS_TIME - Success -- Performing Other Test HAVE_TM_ZONE - Failed -- Performing Other Test HAVE_STRUCT_TM_TM_ZONE - Failed -- Performing Other Test HAVE_TIMEZONE - Success -- Performing Other Test HAVE_STAT_ST_BLOCKS - Success -- Looking for ioctl -- Looking for ioctl - found -- Performing Other Test HAVE_STRUCT_VIDEOCONFIG - Failed -- Performing Other Test HAVE_STRUCT_TEXT_INFO - Failed -- Looking for _getvideoconfig -- Looking for _getvideoconfig - not found -- Looking for gettextinfo -- Looking for gettextinfo - not found -- Looking for _scrsize -- Looking for _scrsize - not found -- Looking for GetConsoleScreenBufferInfo -- Looking for GetConsoleScreenBufferInfo - not found -- Looking for TIOCGWINSZ -- Looking for TIOCGWINSZ - found -- Looking for TIOCGETD -- Looking for TIOCGETD - found -- Looking for getpwuid -- Looking for getpwuid - found -- Looking for alarm -- Looking for alarm - found -- Looking for fork -- Looking for fork - found -- Looking for frexpf -- Looking for frexpf - found -- Looking for frexpl -- Looking for frexpl - found -- Looking for gethostname -- Looking for gethostname - found -- Looking for getrusage -- Looking for getrusage - found -- Looking for lstat -- Looking for lstat - found -- Looking for rand_r -- Looking for rand_r - found -- Looking for random -- Looking for random - found -- Looking for setsysinfo -- Looking for setsysinfo - not found -- Looking for signal -- Looking for signal - found -- Looking for longjmp -- Looking for longjmp - found -- Looking for setjmp -- Looking for setjmp - found -- Looking for siglongjmp -- Looking for siglongjmp - found -- Looking for sigsetjmp -- Looking for sigsetjmp - not found -- Looking for sigprocmask -- Looking for sigprocmask - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for srandom -- Looking for srandom - found -- Looking for strdup -- Looking for strdup - found -- Looking for symlink -- Looking for symlink - found -- Looking for system -- Looking for system - found -- Looking for tmpfile -- Looking for tmpfile - found -- Looking for asprintf -- Looking for asprintf - found -- Looking for vasprintf -- Looking for vasprintf - found -- Looking for waitpid -- Looking for waitpid - found -- Looking for vsnprintf -- Looking for vsnprintf - found -- Performing Other Test VSNPRINTF_WORKS - Success -- Looking for sigsetjmp -- Looking for sigsetjmp - found -- Performing Other Test HAVE_ATTRIBUTE - Success -- Performing Other Test HAVE_C99_FUNC - Success -- Performing Other Test HAVE_FUNCTION - Success -- Performing Other Test HAVE_C99_DESIGNATED_INITIALIZER - Success -- Performing Other Test SYSTEM_SCOPE_THREADS - Success -- Performing Other Test HAVE_SOCKLEN_T - Success -- Performing Other Test CXX_HAVE_OFFSETOF - Success -- Performing CXX Test OLD_HEADER_FILENAME - Failed -- Performing CXX Test H5_NO_NAMESPACE - Failed -- Performing CXX Test H5_NO_STD - Failed -- Performing CXX Test BOOL_NOTDEFINED - Failed -- Performing CXX Test NO_STATIC_CAST - Failed -- Performing Other Test HAVE_INLINE - Success -- Performing Other Test HAVE___INLINE__ - Success -- Performing Other Test HAVE___INLINE - Success -- Checking for appropriate format for 64 bit long: -- Checking for appropriate format for 64 bit long: found "l" -- Looking for difftime -- Looking for difftime - found -- Looking for clock_gettime -- Looking for clock_gettime - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for clock_gettime in posix4 -- Looking for clock_gettime in posix4 - not found -- Performing Other Test HAVE_DIRECT - Success -- Checking IF your system converts long double to (unsigned) long values with special algorithm... no -- Checking IF your system can convert (unsigned) long to long double values with special algorithm... no -- Checking IF correctly converting long double to (unsigned) long long values... yes -- Checking IF correctly converting (unsigned) long long to long double values... yes -- Checking IF alignment restrictions are strictly enforced... yes -- Could NOT find ZLIB (missing: ZLIB_DIR) -- Filter ZLIB is ON CMake Warning (dev) at bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:668 (set): implicitly converting 'INTEGER' to 'STRING' type. This warning is for project developers. Use -Wno-dev to suppress it. DYNAMIC BINARIES for gatb-h5dump -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /<>/obj-powerpc64le-linux-gnu make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-powerpc64le-linux-gnu && make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-powerpc64le-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-powerpc64le-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-powerpc64le-linux-gnu/CMakeFiles /<>/obj-powerpc64le-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-powerpc64le-linux-gnu' make -f bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5detect.dir/build.make bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5detect.dir/depend make -f bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5make_libsettings.dir/build.make bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5make_libsettings.dir/depend make -f bcalm/ext/gatb-core/thirdparty/CMakeFiles/hdf5_postbuild.dir/build.make bcalm/ext/gatb-core/thirdparty/CMakeFiles/hdf5_postbuild.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/src /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5detect.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bcalm/gatb-core/gatb-core/thirdparty /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/CMakeFiles/hdf5_postbuild.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/src /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5make_libsettings.dir/DependInfo.cmake --color= make -f bcalm/ext/gatb-core/thirdparty/CMakeFiles/thirdparty_copy.dir/build.make bcalm/ext/gatb-core/thirdparty/CMakeFiles/thirdparty_copy.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bcalm/gatb-core/gatb-core/thirdparty /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/CMakeFiles/thirdparty_copy.dir/DependInfo.cmake --color= Scanning dependencies of target hdf5_postbuild Scanning dependencies of target thirdparty_copy make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f bcalm/ext/gatb-core/thirdparty/CMakeFiles/hdf5_postbuild.dir/build.make bcalm/ext/gatb-core/thirdparty/CMakeFiles/hdf5_postbuild.dir/build make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f bcalm/ext/gatb-core/thirdparty/CMakeFiles/thirdparty_copy.dir/build.make bcalm/ext/gatb-core/thirdparty/CMakeFiles/thirdparty_copy.dir/build Scanning dependencies of target H5make_libsettings make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5make_libsettings.dir/build.make bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5make_libsettings.dir/build Scanning dependencies of target H5detect make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/json make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5detect.dir/build.make bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5detect.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/BooPHF cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5ACpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Building C object bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5make_libsettings.dir/H5make_libsettings.c.o cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/src && /usr/bin/cc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5 -I/<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src -I/<>/obj-powerpc64le-linux-gnu/lib/kissplice -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c99 -fstdarg-opt -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -fmessage-length=0 -fPIE -w -o CMakeFiles/H5make_libsettings.dir/H5make_libsettings.c.o -c /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5make_libsettings.c [ 0%] Building C object bcalm/ext/gatb-core/thirdparty/hdf5/src/CMakeFiles/H5detect.dir/H5detect.c.o cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/src && /usr/bin/cc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5 -I/<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src -I/<>/obj-powerpc64le-linux-gnu/lib/kissplice -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c99 -fstdarg-opt -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -fmessage-length=0 -fPIE -w -o CMakeFiles/H5detect.dir/H5detect.c.o -c /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5detect.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/BooPHF/BooPHF.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/BooPHF/ cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5ACprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/json/json.hpp /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/json/ cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5ACpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Apkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Built target thirdparty_copy cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Aprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/thirdparty/kissreads/src /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/DependInfo.cmake --color= cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Apublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 Scanning dependencies of target ks_kissreadsSplice make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2pkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/commons.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/commons.c.o -c /<>/thirdparty/kissreads/src/commons.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2private.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2public.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Bpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Bprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Bpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5CSprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Linking C executable ../../../../../../lib/kissplice/H5make_libsettings cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/H5make_libsettings.dir/link.txt --verbose=1 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Cpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 /usr/bin/cc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c99 -fstdarg-opt -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -fmessage-length=0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/H5make_libsettings.dir/H5make_libsettings.c.o -o ../../../../../../lib/kissplice/H5make_libsettings cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Cprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Cpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Built target H5make_libsettings make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/thirdparty/kissreads/src /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/DependInfo.cmake --color= cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 Scanning dependencies of target ks_kissreadsSNPS cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Edefin.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o -c /<>/thirdparty/kissreads/src/commons.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Einit.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Epkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Eprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Epubgen.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Epublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Eterm.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDcore.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDdirect.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDfamily.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDlog.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmpi.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmpio.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmulti.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDsec2.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/extension_algorithm.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/extension_algorithm.c.o -c /<>/thirdparty/kissreads/src/extension_algorithm.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDstdio.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDwindows.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FLprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FOprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 /<>/thirdparty/kissreads/src/extension_algorithm.c: In function ‘feed_coherent_positions’: /<>/thirdparty/kissreads/src/extension_algorithm.c:157:26: note: the layout of aggregates containing vectors with 1-byte alignment has changed in GCC 5 157 | whereReadMaps[4] = overlap_AB; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/extension_algorithm.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/extension_algorithm.c.o -c /<>/thirdparty/kissreads/src/extension_algorithm.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HLpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HLprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HLpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HPprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ipkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Iprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/interface_libchash.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/interface_libchash.c.o -c /<>/thirdparty/kissreads/src/interface_libchash.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ipublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Lpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Lprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Lpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MFpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MFprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MMprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MMpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MPpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MPprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Opkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Opublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5PLextern.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/interface_libchash.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/interface_libchash.c.o -c /<>/thirdparty/kissreads/src/interface_libchash.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5PLprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 0%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/libchash.c.o cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5PLpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/libchash.c.o -c /<>/thirdparty/kissreads/src/libchash.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ppkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Pprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ppublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5RCprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5RSprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Rpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Rprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Rpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SLprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5STprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Spkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Sprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Spublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5TSprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 [ 1%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/libchash.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/libchash.c.o -c /<>/thirdparty/kissreads/src/libchash.c cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5VMprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5WBprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Zpkg.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Zprivate.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Zpublic.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5api_adpt.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5overflow.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5private.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5public.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5version.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5win32defs.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/hdf5.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/H5pubconf.h /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/include/None/hdf5 make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' [ 1%] Built target hdf5_postbuild make -f modules/CMakeFiles/ks_clean_duplicates.dir/build.make modules/CMakeFiles/ks_clean_duplicates.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/modules /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/modules /<>/obj-powerpc64le-linux-gnu/modules/CMakeFiles/ks_clean_duplicates.dir/DependInfo.cmake --color= Scanning dependencies of target ks_clean_duplicates make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f modules/CMakeFiles/ks_clean_duplicates.dir/build.make modules/CMakeFiles/ks_clean_duplicates.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' [ 2%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/CleanDuplicates.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/CleanDuplicates.cpp.o -c /<>/modules/CleanDuplicates.cpp [ 3%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/outputs.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/outputs.c.o -c /<>/thirdparty/kissreads/src/outputs.c [ 3%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/outputs.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/outputs.c.o -c /<>/thirdparty/kissreads/src/outputs.c [ 3%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/coherent_algorithm.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/coherent_algorithm.c.o -c /<>/thirdparty/kissreads/src/coherent_algorithm.c [ 3%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/coherent_algorithm.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/coherent_algorithm.c.o -c /<>/thirdparty/kissreads/src/coherent_algorithm.c [ 3%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/couple.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/couple.c.o -c /<>/thirdparty/kissreads/src/couple.c [ 3%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/couple.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/couple.c.o -c /<>/thirdparty/kissreads/src/couple.c [ 3%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/fragment_index.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/fragment_index.c.o -c /<>/thirdparty/kissreads/src/fragment_index.c [ 3%] Linking C executable ../../../../../../lib/kissplice/H5detect cd /<>/obj-powerpc64le-linux-gnu/bcalm/ext/gatb-core/thirdparty/hdf5/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/H5detect.dir/link.txt --verbose=1 [ 4%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/fragment_index.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/fragment_index.c.o -c /<>/thirdparty/kissreads/src/fragment_index.c /usr/bin/cc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c99 -fstdarg-opt -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -fmessage-length=0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/H5detect.dir/H5detect.c.o -o ../../../../../../lib/kissplice/H5detect make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' [ 4%] Built target H5detect make -f modules/CMakeFiles/ks_bubble_enumeration.dir/build.make modules/CMakeFiles/ks_bubble_enumeration.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/modules /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/modules /<>/obj-powerpc64le-linux-gnu/modules/CMakeFiles/ks_bubble_enumeration.dir/DependInfo.cmake --color= Scanning dependencies of target ks_bubble_enumeration make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f modules/CMakeFiles/ks_bubble_enumeration.dir/build.make modules/CMakeFiles/ks_bubble_enumeration.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' [ 4%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/BubbleEnumeration.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/BubbleEnumeration.cpp.o -c /<>/modules/BubbleEnumeration.cpp [ 5%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/kissReads.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/kissReads.c.o -c /<>/thirdparty/kissreads/src/kissReads.c [ 5%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/kissReads.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/kissReads.c.o -c /<>/thirdparty/kissreads/src/kissReads.c [ 5%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/list.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/list.c.o -c /<>/thirdparty/kissreads/src/list.c [ 5%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/list.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/list.c.o -c /<>/thirdparty/kissreads/src/list.c In file included from /<>/modules/BubbleEnumeration.cpp:61: /<>/modules/BubbleEnumeration.h:124:1: warning: ‘typedef’ was ignored in this declaration 124 | typedef struct Path { | ^~~~~~~ [ 5%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/tree.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/tree.c.o -c /<>/thirdparty/kissreads/src/tree.c [ 5%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/<>/thirdparty/kissreads/include -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o -c /<>/thirdparty/kissreads/src/tree.c /<>/thirdparty/kissreads/src/tree.c: In function ‘tree_create_tree’: /<>/thirdparty/kissreads/src/tree.c:74:6: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 74 | tree tree_create_tree (char * fragment){ | ^~~~~~~~~~~~~~~~ /<>/thirdparty/kissreads/src/tree.c: In function ‘tree_create_tree’: /<>/thirdparty/kissreads/src/tree.c:74:6: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 74 | tree tree_create_tree (char * fragment){ | ^~~~~~~~~~~~~~~~ [ 5%] Linking C executable ../../../lib/kissplice/ks_kissreadsSplice cd /<>/obj-powerpc64le-linux-gnu/thirdparty/kissreads/src && 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CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:59: multiple definition of `size_seeds'; CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:59: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:58: multiple definition of `kmer_size'; CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:58: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:57: multiple definition of `only_print'; CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:57: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:56: multiple definition of `quality'; CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:56: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:55: multiple definition of `silent'; CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:55: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:54: multiple definition of `standard_fasta'; CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:54: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:53: multiple definition of `nuc'; CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:53: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:52: multiple definition of `comp'; CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o:./obj-powerpc64le-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:52: first defined here cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/CycleCompression.cpp.o -c /<>/modules/CycleCompression.cpp collect2: error: ld returned 1 exit status make[3]: *** [thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build.make:238: lib/kissplice/ks_kissreadsSNPS] Error 1 make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make[2]: *** [CMakeFiles/Makefile2:1583: thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/all] Error 2 [ 7%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/NGraph.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/NGraph.cpp.o -c /<>/modules/NGraph.cpp In file included from /usr/include/c++/10/algorithm:62, from /<>/modules/CEdge.h:63, from /<>/modules/LabelledCEdge.h:69, from /<>/modules/BubbleEnumeration.cpp:58: /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/10/bits/stl_algo.h:1839:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ [ 7%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/CGraph.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/CGraph.cpp.o -c /<>/modules/CGraph.cpp In file included from /usr/include/c++/10/algorithm:62, from /<>/modules/CGraph.h:62, from /<>/modules/CGraph.cpp:62: /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/10/bits/stl_algo.h:1839:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ [ 7%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/CEdge.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/CEdge.cpp.o -c /<>/modules/CEdge.cpp [ 7%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/LabelledCEdge.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/LabelledCEdge.cpp.o -c /<>/modules/LabelledCEdge.cpp [ 8%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/NNode.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/NNode.cpp.o -c /<>/modules/NNode.cpp [ 8%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/NEdge.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/NEdge.cpp.o -c /<>/modules/NEdge.cpp [ 8%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/Utils.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/Utils.cpp.o -c /<>/modules/Utils.cpp [ 8%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/CycleCompression.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/CycleCompression.cpp.o -c /<>/modules/CycleCompression.cpp [ 8%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/NGraph.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/NGraph.cpp.o -c /<>/modules/NGraph.cpp [ 8%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/CGraph.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/CGraph.cpp.o -c /<>/modules/CGraph.cpp In file included from /<>/modules/NGraph.cpp:74: /<>/modules/NGraph.h: In member function ‘void NGraph::compress_all_bubbles(int*, FILE*, int, bool)’: /<>/modules/NGraph.h:104:7: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 104 | class NGraph | ^~~~~~ In file included from /usr/include/c++/10/algorithm:62, from /<>/modules/CGraph.h:62, from /<>/modules/CGraph.cpp:62: /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/10/bits/stl_algo.h:1839:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ [ 8%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/CEdge.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/CEdge.cpp.o -c /<>/modules/CEdge.cpp [ 9%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/LabelledCEdge.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/LabelledCEdge.cpp.o -c /<>/modules/LabelledCEdge.cpp [ 9%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/NNode.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/NNode.cpp.o -c /<>/modules/NNode.cpp [ 9%] Linking CXX executable ../lib/kissplice/ks_bubble_enumeration cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_bubble_enumeration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_bubble_enumeration.dir/BubbleEnumeration.cpp.o CMakeFiles/ks_bubble_enumeration.dir/CycleCompression.cpp.o CMakeFiles/ks_bubble_enumeration.dir/NGraph.cpp.o CMakeFiles/ks_bubble_enumeration.dir/CGraph.cpp.o CMakeFiles/ks_bubble_enumeration.dir/CEdge.cpp.o CMakeFiles/ks_bubble_enumeration.dir/LabelledCEdge.cpp.o CMakeFiles/ks_bubble_enumeration.dir/NNode.cpp.o CMakeFiles/ks_bubble_enumeration.dir/NEdge.cpp.o CMakeFiles/ks_bubble_enumeration.dir/Utils.cpp.o -o ../lib/kissplice/ks_bubble_enumeration [ 9%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/NEdge.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/NEdge.cpp.o -c /<>/modules/NEdge.cpp make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' [ 9%] Built target ks_bubble_enumeration [ 9%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/Utils.cpp.o cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/c++ -I/<>/modules -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/Utils.cpp.o -c /<>/modules/Utils.cpp In file included from /<>/modules/NGraph.cpp:74: /<>/modules/NGraph.h: In member function ‘void NGraph::compress_all_bubbles(int*, FILE*, int, bool)’: /<>/modules/NGraph.h:104:7: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 104 | class NGraph | ^~~~~~ [ 10%] Linking CXX executable ../lib/kissplice/ks_clean_duplicates cd /<>/obj-powerpc64le-linux-gnu/modules && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_clean_duplicates.dir/link.txt --verbose=1 /usr/bin/c++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_clean_duplicates.dir/CleanDuplicates.cpp.o CMakeFiles/ks_clean_duplicates.dir/CycleCompression.cpp.o CMakeFiles/ks_clean_duplicates.dir/NGraph.cpp.o CMakeFiles/ks_clean_duplicates.dir/CGraph.cpp.o CMakeFiles/ks_clean_duplicates.dir/CEdge.cpp.o CMakeFiles/ks_clean_duplicates.dir/LabelledCEdge.cpp.o CMakeFiles/ks_clean_duplicates.dir/NNode.cpp.o CMakeFiles/ks_clean_duplicates.dir/NEdge.cpp.o CMakeFiles/ks_clean_duplicates.dir/Utils.cpp.o -o ../lib/kissplice/ks_clean_duplicates make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' [ 10%] Built target ks_clean_duplicates make[2]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make[1]: *** [Makefile:166: all] Error 2 make[1]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' dh_auto_build: error: cd obj-powerpc64le-linux-gnu && make -j4 "INSTALL=install --strip-program=true" returned exit code 2 make: *** [debian/rules:36: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2020-09-30T10:22:10Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build Type: any Build-Space: n/a Build-Time: 36 Distribution: groovy Fail-Stage: build Host Architecture: ppc64el Install-Time: 15 Job: kissplice_2.5.3-2.dsc Machine Architecture: ppc64el Package: kissplice Package-Time: 52 Source-Version: 2.5.3-2 Space: n/a Status: attempted Version: 2.5.3-2 -------------------------------------------------------------------------------- Finished at 2020-09-30T10:22:10Z Build needed 00:00:52, no disk space E: Build failure (dpkg-buildpackage died) RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-20007847 Scanning for processes to kill in build PACKAGEBUILD-20007847