https://launchpad.net/ubuntu/+archive/test-rebuild-20200925-groovy/+build/20043443 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-032 4.15.0-118-generic #119-Ubuntu SMP Tue Sep 8 12:21:56 UTC 2020 aarch64 Buildd toolchain package versions: launchpad-buildd_193~468~ubuntu18.04.1 python3-lpbuildd_193~468~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 1 Oct 03:18:00 ntpdate[1614]: adjust time server 10.211.37.1 offset -0.000966 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-20043443 --image-type chroot /home/buildd/filecache-default/3ff5711ac2503d035c89289b694a465e92f31811 Creating target for build PACKAGEBUILD-20043443 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-20043443 Starting target for build PACKAGEBUILD-20043443 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-20043443 'deb http://ftpmaster.internal/ubuntu groovy main universe' Overriding sources.list in build-PACKAGEBUILD-20043443 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-20043443 Updating target for build PACKAGEBUILD-20043443 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 Packages [1344 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main Translation-en [507 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/universe arm64 Packages [12.3 MB] Get:5 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5260 kB] Fetched 19.7 MB in 8s (2551 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libffi7 libjson-c4 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libffi8ubuntu1 libgssapi-krb5-2 libjson-c5 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libnsl-dev libnsl2 libnss-nis libnss-nisplus libtirpc-common libtirpc-dev libtirpc3 rpcsvc-proto The following packages will be upgraded: apt base-files binutils binutils-aarch64-linux-gnu binutils-common bsdutils build-essential ca-certificates coreutils cpp cpp-10 debianutils dpkg dpkg-dev g++ g++-10 gcc gcc-10 gcc-10-base libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap2 libcc1-0 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdpkg-perl libgcc-10-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgmp10 libgnutls30 libgomp1 libip4tc2 libitm1 liblsan0 liblzma5 libmount1 libmpc3 libmpfr6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpng16-16 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libssl1.1 libstdc++-10-dev libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev mount openssl sensible-utils systemd systemd-sysv systemd-timesyncd util-linux xz-utils zlib1g 82 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. Need to get 60.9 MB of archives. After this operation, 3470 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy/main arm64 libkrb5support0 arm64 1.17-10 [30.2 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 libk5crypto3 arm64 1.17-10 [80.3 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main arm64 libkeyutils1 arm64 1.6.1-2ubuntu1 [9932 B] Get:4 http://ftpmaster.internal/ubuntu groovy/main arm64 libssl1.1 arm64 1.1.1f-1ubuntu4 [1160 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 libkrb5-3 arm64 1.17-10 [312 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main arm64 libgssapi-krb5-2 arm64 1.17-10 [113 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main arm64 libtirpc-common all 1.2.6-1build1 [7472 B] Get:8 http://ftpmaster.internal/ubuntu groovy/main arm64 libtirpc3 arm64 1.2.6-1build1 [73.5 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main arm64 libnsl2 arm64 1.3.0-0ubuntu3 [37.0 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main arm64 libnss-nis arm64 3.1-0ubuntu4 [23.8 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main arm64 libnss-nisplus arm64 1.3-0ubuntu4 [20.7 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main arm64 libc6 arm64 2.32-0ubuntu3 [2252 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main arm64 libc-dev-bin arm64 2.32-0ubuntu3 [28.7 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main arm64 libc6-dev arm64 2.32-0ubuntu3 [1726 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu3 [59.8 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main arm64 libtirpc-dev arm64 1.2.6-1build1 [185 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main arm64 libnsl-dev arm64 1.3.0-0ubuntu3 [65.6 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main arm64 libc-bin arm64 2.32-0ubuntu3 [504 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main arm64 linux-libc-dev arm64 5.8.0-20.21 [1135 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main arm64 libcc1-0 arm64 10.2.0-11ubuntu1 [37.0 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main arm64 libctf0 arm64 2.35.1-1ubuntu1 [44.0 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main arm64 libctf-nobfd0 arm64 2.35.1-1ubuntu1 [44.8 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils-aarch64-linux-gnu arm64 2.35.1-1ubuntu1 [2026 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main arm64 libbinutils arm64 2.35.1-1ubuntu1 [484 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils-common arm64 2.35.1-1ubuntu1 [212 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils arm64 2.35.1-1ubuntu1 [3356 B] Get:27 http://ftpmaster.internal/ubuntu groovy/main arm64 gcc-10-base arm64 10.2.0-11ubuntu1 [19.5 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main arm64 libgcc-s1 arm64 10.2.0-11ubuntu1 [34.6 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main arm64 libgomp1 arm64 10.2.0-11ubuntu1 [94.1 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main arm64 libitm1 arm64 10.2.0-11ubuntu1 [24.3 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main arm64 libatomic1 arm64 10.2.0-11ubuntu1 [9888 B] Get:32 http://ftpmaster.internal/ubuntu groovy/main arm64 libasan6 arm64 10.2.0-11ubuntu1 [319 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main arm64 liblsan0 arm64 10.2.0-11ubuntu1 [130 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main arm64 libtsan0 arm64 10.2.0-11ubuntu1 [303 kB] Get:35 http://ftpmaster.internal/ubuntu groovy/main arm64 libubsan1 arm64 10.2.0-11ubuntu1 [127 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main arm64 g++-10 arm64 10.2.0-11ubuntu1 [8097 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main arm64 libstdc++-10-dev arm64 10.2.0-11ubuntu1 [1719 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main arm64 libgcc-10-dev arm64 10.2.0-11ubuntu1 [910 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main arm64 gcc-10 arm64 10.2.0-11ubuntu1 [14.6 MB] Get:40 http://ftpmaster.internal/ubuntu groovy/main arm64 cpp-10 arm64 10.2.0-11ubuntu1 [7141 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/main arm64 libstdc++6 arm64 10.2.0-11ubuntu1 [464 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main arm64 zlib1g arm64 1:1.2.11.dfsg-2ubuntu2 [51.1 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main arm64 libgmp10 arm64 2:6.2.0+dfsg-6ubuntu1 [216 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main arm64 libmpfr6 arm64 4.1.0-3 [216 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main arm64 libmpc3 arm64 1.2.0~rc1-1 [42.5 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main arm64 libzstd1 arm64 1.4.5+dfsg-4 [269 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main arm64 base-files arm64 11ubuntu13 [60.4 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main arm64 bsdutils arm64 1:2.36-3ubuntu1 [82.8 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main arm64 libselinux1 arm64 3.1-2 [64.9 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main arm64 coreutils arm64 8.32-3ubuntu1 [1257 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main arm64 debianutils arm64 4.11.1 [85.2 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main arm64 dpkg arm64 1.20.5ubuntu2 [1156 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main arm64 util-linux arm64 2.36-3ubuntu1 [1028 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main arm64 liblzma5 arm64 5.2.4-1ubuntu1 [87.9 kB] Get:55 http://ftpmaster.internal/ubuntu groovy/main arm64 libffi8ubuntu1 arm64 3.4~20200819gead65ca871-0ubuntu3 [17.4 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/main arm64 libp11-kit0 arm64 0.23.21-2build1 [182 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main arm64 libgnutls30 arm64 3.6.15-4ubuntu2 [698 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/main arm64 systemd-sysv arm64 246.6-1ubuntu1 [10.3 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main arm64 systemd-timesyncd arm64 246.6-1ubuntu1 [26.3 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main arm64 libapparmor1 arm64 3.0.0~beta1-0ubuntu6 [35.4 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main arm64 libaudit-common all 1:2.8.5-3ubuntu1 [4076 B] Get:62 http://ftpmaster.internal/ubuntu groovy/main arm64 libaudit1 arm64 1:2.8.5-3ubuntu1 [38.3 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main arm64 libcap2 arm64 1:2.43-1 [17.2 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main arm64 libjson-c5 arm64 0.15-1 [29.9 kB] Get:65 http://ftpmaster.internal/ubuntu groovy/main arm64 libblkid1 arm64 2.36-3ubuntu1 [126 kB] Get:66 http://ftpmaster.internal/ubuntu groovy/main arm64 libuuid1 arm64 2.36-3ubuntu1 [21.2 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/main arm64 libcryptsetup12 arm64 2:2.3.3-1ubuntu6 [176 kB] Get:68 http://ftpmaster.internal/ubuntu groovy/main arm64 libip4tc2 arm64 1.8.5-3ubuntu1 [18.7 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/main arm64 libmount1 arm64 2.36-3ubuntu1 [139 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/main arm64 libpam0g arm64 1.3.1-5ubuntu6 [54.6 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/main arm64 mount arm64 2.36-3ubuntu1 [117 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main arm64 systemd arm64 246.6-1ubuntu1 [3840 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/main arm64 libsystemd0 arm64 246.6-1ubuntu1 [252 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/main arm64 libudev1 arm64 246.6-1ubuntu1 [62.4 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/main arm64 libapt-pkg6.0 arm64 2.1.10 [768 kB] Get:76 http://ftpmaster.internal/ubuntu groovy/main arm64 apt arm64 2.1.10 [1247 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/main arm64 libpam-modules-bin arm64 1.3.1-5ubuntu6 [35.9 kB] Get:78 http://ftpmaster.internal/ubuntu groovy/main arm64 libpam-modules arm64 1.3.1-5ubuntu6 [242 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/main arm64 libdb5.3 arm64 5.3.28+dfsg1-0.6ubuntu3 [620 kB] Get:80 http://ftpmaster.internal/ubuntu groovy/main arm64 libpam-runtime all 1.3.1-5ubuntu6 [37.3 kB] Get:81 http://ftpmaster.internal/ubuntu groovy/main arm64 libsemanage-common all 3.1-1 [10.2 kB] Get:82 http://ftpmaster.internal/ubuntu groovy/main arm64 libsemanage1 arm64 3.1-1 [80.6 kB] Get:83 http://ftpmaster.internal/ubuntu groovy/main arm64 libsmartcols1 arm64 2.36-3ubuntu1 [90.7 kB] Get:84 http://ftpmaster.internal/ubuntu groovy/main arm64 sensible-utils all 0.0.13 [15.1 kB] Get:85 http://ftpmaster.internal/ubuntu groovy/main arm64 openssl arm64 1.1.1f-1ubuntu4 [600 kB] Get:86 http://ftpmaster.internal/ubuntu groovy/main arm64 ca-certificates all 20200601 [147 kB] Get:87 http://ftpmaster.internal/ubuntu groovy/main arm64 libsqlite3-0 arm64 3.33.0-1 [540 kB] Get:88 http://ftpmaster.internal/ubuntu groovy/main arm64 xz-utils arm64 5.2.4-1ubuntu1 [81.2 kB] Get:89 http://ftpmaster.internal/ubuntu groovy/main arm64 libgdbm6 arm64 1.18.1-5.1 [26.6 kB] Get:90 http://ftpmaster.internal/ubuntu groovy/main arm64 libpng16-16 arm64 1.6.37-3 [175 kB] Get:91 http://ftpmaster.internal/ubuntu groovy/main arm64 g++ arm64 4:10.2.0-1ubuntu1 [1592 B] Get:92 http://ftpmaster.internal/ubuntu groovy/main arm64 gcc arm64 4:10.2.0-1ubuntu1 [5228 B] Get:93 http://ftpmaster.internal/ubuntu groovy/main arm64 cpp arm64 4:10.2.0-1ubuntu1 [27.7 kB] Get:94 http://ftpmaster.internal/ubuntu groovy/main arm64 dpkg-dev all 1.20.5ubuntu2 [758 kB] Get:95 http://ftpmaster.internal/ubuntu groovy/main arm64 libdpkg-perl all 1.20.5ubuntu2 [232 kB] Get:96 http://ftpmaster.internal/ubuntu groovy/main arm64 build-essential arm64 12.8ubuntu3 [4636 B] Get:97 http://ftpmaster.internal/ubuntu groovy/main arm64 libgdbm-compat4 arm64 1.18.1-5.1 [6044 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 60.9 MB in 3s (20.3 MB/s) Selecting previously unselected package libkrb5support0:arm64. (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../libkrb5support0_1.17-10_arm64.deb ... Unpacking libkrb5support0:arm64 (1.17-10) ... Setting up libkrb5support0:arm64 (1.17-10) ... Selecting previously unselected package libk5crypto3:arm64. (Reading database ... 12782 files and directories currently installed.) Preparing to unpack .../libk5crypto3_1.17-10_arm64.deb ... Unpacking libk5crypto3:arm64 (1.17-10) ... Setting up libk5crypto3:arm64 (1.17-10) ... Selecting previously unselected package libkeyutils1:arm64. (Reading database ... 12787 files and directories currently installed.) Preparing to unpack .../libkeyutils1_1.6.1-2ubuntu1_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.1-2ubuntu1) ... Setting up libkeyutils1:arm64 (1.6.1-2ubuntu1) ... (Reading database ... 12792 files and directories currently installed.) Preparing to unpack .../libssl1.1_1.1.1f-1ubuntu4_arm64.deb ... 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RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20043443 arm64 groovy -c chroot:build-PACKAGEBUILD-20043443 --arch=arm64 --dist=groovy --nolog 'pysph_1.0~b0~20191115.gite3d5e10-2.dsc' Initiating build PACKAGEBUILD-20043443 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-118-generic #119-Ubuntu SMP Tue Sep 8 12:21:56 UTC 2020 aarch64 sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-arm64-032.buildd +==============================================================================+ | pysph 1.0~b0~20191115.gite3d5e10-2 (arm64) Thu, 01 Oct 2020 03:19:42 +0000 | +==============================================================================+ Package: pysph Version: 1.0~b0~20191115.gite3d5e10-2 Source Version: 1.0~b0~20191115.gite3d5e10-2 Distribution: groovy Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20043443/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- pysph_1.0~b0~20191115.gite3d5e10-2.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/pysph-nShcpA/pysph-1.0~b0~20191115.gite3d5e10' with '<>' I: NOTICE: Log filtering will replace 'build/pysph-nShcpA' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-6y3gxM/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-6y3gxM/apt_archive ./ InRelease Get:2 copy:/<>/resolver-6y3gxM/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-6y3gxM/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-6y3gxM/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-6y3gxM/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (25.2 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi7 libjson-c4 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-6y3gxM/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (36.9 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13027 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: cython3, debhelper-compat (= 12), dh-python, libjs-mathjax, libtrilinos-zoltan-dev, mpi-default-dev, python3-all-dev, python3-beaker, python3-compyle, python3-cyarray, python3-h5py, python3-mako (>= 1.1.0), python3-nose, python3-mpi4py, python3-numpy, python3-pytest, python3-pytest-runner, python3-pytools, python3-setuptools, python3-sphinx, python3-sphinx-rtd-theme, python3-stl, python3-traits, python3-pyzoltan Filtered Build-Depends: cython3, debhelper-compat (= 12), dh-python, libjs-mathjax, libtrilinos-zoltan-dev, mpi-default-dev, python3-all-dev, python3-beaker, python3-compyle, python3-cyarray, python3-h5py, python3-mako (>= 1.1.0), python3-nose, python3-mpi4py, python3-numpy, python3-pytest, python3-pytest-runner, python3-pytools, python3-setuptools, python3-sphinx, python3-sphinx-rtd-theme, python3-stl, python3-traits, python3-pyzoltan dpkg-deb: building package 'sbuild-build-depends-pysph-dummy' in '/<>/resolver-6y3gxM/apt_archive/sbuild-build-depends-pysph-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-pysph-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-6y3gxM/apt_archive ./ InRelease Get:2 copy:/<>/resolver-6y3gxM/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-6y3gxM/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-6y3gxM/apt_archive ./ Sources [644 B] Get:5 copy:/<>/resolver-6y3gxM/apt_archive ./ Packages [726 B] Fetched 2333 B in 0s (37.4 kB/s) Reading package lists... Reading package lists... Install pysph build dependencies (apt-based resolver) ----------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi7 libjson-c4 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cpp-9 cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-font-awesome fonts-lato fonts-mathjax gcc-9 gcc-9-base gettext gettext-base gfortran-9 groff-base ibverbs-providers intltool-debian libaec0 libarchive-zip-perl libasan5 libblas3 libbsd0 libcbor0.6 libcroco3 libdebhelper-perl libedit2 libelf1 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libexpat1-dev libfido2-1 libfile-stripnondeterminism-perl libgcc-9-dev libgfortran-9-dev libgfortran5 libglib2.0-0 libhdf5-103-1 libhdf5-hl-100 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu67 libjs-jquery libjs-mathjax libjs-sphinxdoc libjs-underscore liblapack3 libltdl-dev libltdl7 liblzf1 libmagic-mgc libmagic1 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpmix2 libptscotch-6.0 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libscotch-6.0 libsigsegv2 libsub-override-perl libsz2 libtool libtrilinos-zoltan-dev libtrilinos-zoltan12 libuchardet0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db mime-support mpi-default-bin mpi-default-dev node-jquery ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client po-debconf python-babel-localedata python3 python3-alabaster python3-all python3-all-dev python3-appdirs python3-atomicwrites python3-attr python3-babel python3-beaker python3-certifi python3-chardet python3-compyle python3-cyarray python3-decorator python3-dev python3-distutils python3-docutils python3-h5py python3-h5py-serial python3-idna python3-imagesize python3-importlib-metadata python3-jinja2 python3-lib2to3 python3-mako python3-markupsafe python3-minimal python3-more-itertools python3-mpi4py python3-nose python3-numpy python3-packaging python3-pkg-resources python3-pluggy python3-py python3-pygments python3-pyparsing python3-pytest python3-pytest-runner python3-python-utils python3-pytools python3-pyzoltan python3-requests python3-roman python3-setuptools python3-six python3-sphinx python3-sphinx-rtd-theme python3-stl python3-traits python3-tz python3-urllib3 python3-wcwidth python3-zipp python3.8 python3.8-dev python3.8-minimal sgml-base sphinx-common sphinx-rtd-theme-common trilinos-dev xml-core zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc gcc-9-locales cython-doc dh-make gcc-9-doc gettext-doc libasprintf-dev libgettextpo-dev gfortran-9-doc libcoarrays-dev groff fonts-mathjax-extras fonts-stix libjs-mathjax-doc libtool-doc openmpi-doc pciutils gcj-jdk trilinos-doc m4-doc apparmor less www-browser opencl-icd gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl python3-doc python3-tk python3-venv python-attr-doc python3-sqlalchemy python3-pycryptopp | python3-crypto python3-pylibmc | python3-memcache python3-pymongo python3-redis python3-pycuda python3-pyopencl docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-h5py-doc python-jinja2-doc python-mako-doc python-nose-doc gfortran python-numpy-doc python3-numpy-dbg subversion python-pygments-doc ttf-bitstream-vera python-pyparsing-doc python3-cryptography python3-openssl python3-socks python-requests-doc python-setuptools-doc dvipng fonts-freefont-otf imagemagick-6.q16 latexmk python3-stemmer sphinx-doc texlive-fonts-recommended texlive-latex-extra texlive-plain-generic python3.8-venv python3.8-doc binfmt-support sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libcoarrays-openmpi-dev xauth libmail-sendmail-perl libpaper-utils python3-pil The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cpp-9 cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-font-awesome fonts-lato fonts-mathjax gcc-9 gcc-9-base gettext gettext-base gfortran-9 groff-base ibverbs-providers intltool-debian libaec0 libarchive-zip-perl libasan5 libblas3 libbsd0 libcbor0.6 libcroco3 libdebhelper-perl libedit2 libelf1 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libexpat1-dev libfido2-1 libfile-stripnondeterminism-perl libgcc-9-dev libgfortran-9-dev libgfortran5 libglib2.0-0 libhdf5-103-1 libhdf5-hl-100 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu67 libjs-jquery libjs-mathjax libjs-sphinxdoc libjs-underscore liblapack3 libltdl-dev libltdl7 liblzf1 libmagic-mgc libmagic1 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpmix2 libptscotch-6.0 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libscotch-6.0 libsigsegv2 libsub-override-perl libsz2 libtool libtrilinos-zoltan-dev libtrilinos-zoltan12 libuchardet0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db mime-support mpi-default-bin mpi-default-dev node-jquery ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client po-debconf python-babel-localedata python3 python3-alabaster python3-all python3-all-dev python3-appdirs python3-atomicwrites python3-attr python3-babel python3-beaker python3-certifi python3-chardet python3-compyle python3-cyarray python3-decorator python3-dev python3-distutils python3-docutils python3-h5py python3-h5py-serial python3-idna python3-imagesize python3-importlib-metadata python3-jinja2 python3-lib2to3 python3-mako python3-markupsafe python3-minimal python3-more-itertools python3-mpi4py python3-nose python3-numpy python3-packaging python3-pkg-resources python3-pluggy python3-py python3-pygments python3-pyparsing python3-pytest python3-pytest-runner python3-python-utils python3-pytools python3-pyzoltan python3-requests python3-roman python3-setuptools python3-six python3-sphinx python3-sphinx-rtd-theme python3-stl python3-traits python3-tz python3-urllib3 python3-wcwidth python3-zipp python3.8 python3.8-dev python3.8-minimal sbuild-build-depends-pysph-dummy sgml-base sphinx-common sphinx-rtd-theme-common trilinos-dev xml-core zlib1g-dev 0 upgraded, 178 newly installed, 0 to remove and 0 not upgraded. Need to get 87.7 MB of archives. After this operation, 396 MB of additional disk space will be used. Get:1 copy:/<>/resolver-6y3gxM/apt_archive ./ sbuild-build-depends-pysph-dummy 0.invalid.0 [1020 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 libpython3.8-minimal arm64 3.8.6-1 [712 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main arm64 libexpat1 arm64 2.2.9-1build1 [61.3 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main arm64 python3.8-minimal arm64 3.8.6-1 [1752 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-minimal arm64 3.8.2-0ubuntu2 [23.6 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main arm64 mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main arm64 libpython3.8-stdlib arm64 3.8.6-1 [1709 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main arm64 python3.8 arm64 3.8.6-1 [376 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main arm64 libpython3-stdlib arm64 3.8.2-0ubuntu2 [7068 B] Get:10 http://ftpmaster.internal/ubuntu groovy/main arm64 python3 arm64 3.8.2-0ubuntu2 [47.6 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main arm64 bsdextrautils arm64 2.36-3ubuntu1 [74.2 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main arm64 libuchardet0 arm64 0.0.7-1 [68.0 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main arm64 groff-base arm64 1.22.4-5 [797 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main arm64 libpipeline1 arm64 1.5.3-1 [26.1 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main arm64 man-db arm64 2.9.3-2 [1100 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main arm64 fonts-lato all 2.0-2 [2698 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main arm64 sgml-base all 1.30 [12.5 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main arm64 libmagic-mgc arm64 1:5.38-5 [218 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main arm64 libmagic1 arm64 1:5.38-5 [71.6 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main arm64 file arm64 1:5.38-5 [23.3 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main arm64 libbsd0 arm64 0.10.0-1 [43.7 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main arm64 libelf1 arm64 0.181-1 [43.4 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main arm64 libglib2.0-0 arm64 2.66.0-2 [1219 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main arm64 libicu67 arm64 67.1-4 [8461 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main arm64 libxml2 arm64 2.9.10+dfsg-5build1 [559 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-pkg-resources all 49.3.1-2 [130 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main arm64 gettext-base arm64 0.19.8.1-10build1 [48.2 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main arm64 libcbor0.6 arm64 0.6.0-0ubuntu3 [20.7 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main arm64 libedit2 arm64 3.1-20191231-1 [82.7 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main arm64 libfido2-1 arm64 1.4.0-2 [46.7 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main arm64 libnuma1 arm64 2.0.12-1build1 [20.6 kB] Get:32 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autotools-dev all 20180224.1 [39.6 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main arm64 automake all 1:1.16.2-4ubuntu1 [548 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main arm64 autopoint all 0.19.8.1-10build1 [412 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/universe arm64 gcc-9-base arm64 9.3.0-18ubuntu1 [19.1 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/universe arm64 cpp-9 arm64 9.3.0-18ubuntu1 [5972 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/universe arm64 cython3 arm64 0.29.21-1ubuntu1 [1219 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/universe arm64 libasan5 arm64 9.3.0-18ubuntu1 [365 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/universe arm64 libgcc-9-dev arm64 9.3.0-18ubuntu1 [911 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/universe arm64 gcc-9 arm64 9.3.0-18ubuntu1 [6707 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main arm64 libtool all 2.4.6-14 [161 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main arm64 dh-autoreconf all 19 [16.1 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main arm64 libdebhelper-perl all 13.2.1ubuntu1 [63.6 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:55 http://ftpmaster.internal/ubuntu groovy/main arm64 libsub-override-perl all 0.09-2 [9532 B] Get:56 http://ftpmaster.internal/ubuntu groovy/main arm64 libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main arm64 dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:58 http://ftpmaster.internal/ubuntu groovy/main arm64 dwz arm64 0.13-5 [134 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main arm64 libcroco3 arm64 0.6.13-1 [77.1 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main arm64 gettext arm64 0.19.8.1-10build1 [850 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main arm64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:62 http://ftpmaster.internal/ubuntu groovy/main arm64 po-debconf all 1.0.21 [233 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main arm64 debhelper all 13.2.1ubuntu1 [879 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-lib2to3 all 3.8.5-1 [75.6 kB] Get:65 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-distutils all 3.8.5-1 [141 kB] Get:66 http://ftpmaster.internal/ubuntu groovy/universe arm64 dh-python all 4.20200925 [92.2 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/main arm64 xml-core all 0.18+nmu1 [21.6 kB] Get:68 http://ftpmaster.internal/ubuntu groovy/main arm64 docutils-common all 0.16+dfsg-3 [116 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-2 [514 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/main arm64 libgfortran5 arm64 10.2.0-11ubuntu1 [345 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/universe arm64 libgfortran-9-dev arm64 9.3.0-18ubuntu1 [389 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/universe arm64 gfortran-9 arm64 9.3.0-18ubuntu1 [6375 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/main arm64 libnl-3-200 arm64 3.4.0-1 [51.5 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/main arm64 libnl-route-3-200 arm64 3.4.0-1 [138 kB] Get:76 http://ftpmaster.internal/ubuntu groovy/main arm64 libibverbs1 arm64 31.0-1 [53.3 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/main arm64 ibverbs-providers arm64 31.0-1 [219 kB] Get:78 http://ftpmaster.internal/ubuntu groovy/universe arm64 libaec0 arm64 1.0.4-1 [18.7 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/main arm64 libblas3 arm64 3.9.0-3ubuntu1 [89.3 kB] Get:80 http://ftpmaster.internal/ubuntu groovy/main arm64 libevent-2.1-7 arm64 2.1.12-stable-1 [126 kB] Get:81 http://ftpmaster.internal/ubuntu groovy/main arm64 libevent-core-2.1-7 arm64 2.1.12-stable-1 [82.8 kB] Get:82 http://ftpmaster.internal/ubuntu groovy/main arm64 libevent-extra-2.1-7 arm64 2.1.12-stable-1 [54.0 kB] Get:83 http://ftpmaster.internal/ubuntu groovy/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-1 [7292 B] Get:84 http://ftpmaster.internal/ubuntu groovy/main arm64 libevent-openssl-2.1-7 arm64 2.1.12-stable-1 [13.1 kB] Get:85 http://ftpmaster.internal/ubuntu groovy/main arm64 libevent-dev arm64 2.1.12-stable-1 [259 kB] Get:86 http://ftpmaster.internal/ubuntu groovy/main arm64 libexpat1-dev arm64 2.2.9-1build1 [103 kB] Get:87 http://ftpmaster.internal/ubuntu groovy/universe arm64 libsz2 arm64 1.0.4-1 [5100 B] Get:88 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhdf5-103-1 arm64 1.10.6+repack-2 [1002 kB] Get:89 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhdf5-hl-100 arm64 1.10.6+repack-2 [50.5 kB] Get:90 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhwloc15 arm64 2.2.0+dfsg-3 [116 kB] Get:91 http://ftpmaster.internal/ubuntu groovy/main arm64 node-jquery all 3.5.1+dfsg-4 [309 kB] Get:92 http://ftpmaster.internal/ubuntu groovy/main arm64 libjs-jquery all 3.5.1+dfsg-4 [2308 B] Get:93 http://ftpmaster.internal/ubuntu groovy/main arm64 libjs-underscore all 1.9.1~dfsg-1 [98.6 kB] Get:94 http://ftpmaster.internal/ubuntu groovy/main arm64 libjs-sphinxdoc all 3.2.1-1 [122 kB] Get:95 http://ftpmaster.internal/ubuntu groovy/main arm64 liblapack3 arm64 3.9.0-3ubuntu1 [1528 kB] Get:96 http://ftpmaster.internal/ubuntu groovy/main arm64 libltdl7 arm64 2.4.6-14 [37.5 kB] Get:97 http://ftpmaster.internal/ubuntu groovy/main arm64 libltdl-dev arm64 2.4.6-14 [162 kB] Get:98 http://ftpmaster.internal/ubuntu groovy/universe arm64 liblzf1 arm64 3.6-2 [7032 B] Get:99 http://ftpmaster.internal/ubuntu groovy/main arm64 libnl-3-dev arm64 3.4.0-1 [93.7 kB] Get:100 http://ftpmaster.internal/ubuntu groovy/main arm64 libnl-route-3-dev arm64 3.4.0-1 [166 kB] Get:101 http://ftpmaster.internal/ubuntu groovy/main arm64 libpciaccess0 arm64 0.16-1 [17.3 kB] Get:102 http://ftpmaster.internal/ubuntu groovy/main arm64 libxnvctrl0 arm64 440.82-0ubuntu1 [10.7 kB] Get:103 http://ftpmaster.internal/ubuntu groovy/main arm64 ocl-icd-libopencl1 arm64 2.2.11-1ubuntu1 [29.2 kB] Get:104 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhwloc-plugins arm64 2.2.0+dfsg-3 [14.1 kB] Get:105 http://ftpmaster.internal/ubuntu groovy/universe arm64 libpmix2 arm64 3.1.5-1 [404 kB] Get:106 http://ftpmaster.internal/ubuntu groovy/universe arm64 libopenmpi3 arm64 4.0.3-6ubuntu2 [1814 kB] Get:107 http://ftpmaster.internal/ubuntu groovy/universe arm64 libptscotch-6.0 arm64 6.0.9-1 [596 kB] Get:108 http://ftpmaster.internal/ubuntu groovy/main arm64 libpython3.8 arm64 3.8.6-1 [1480 kB] Get:109 http://ftpmaster.internal/ubuntu groovy/main arm64 libpython3.8-dev arm64 3.8.6-1 [3349 kB] Get:110 http://ftpmaster.internal/ubuntu groovy/main arm64 libpython3-dev arm64 3.8.2-0ubuntu2 [7236 B] Get:111 http://ftpmaster.internal/ubuntu groovy/main arm64 libpython3-all-dev arm64 3.8.2-0ubuntu2 [1116 B] Get:112 http://ftpmaster.internal/ubuntu groovy/universe arm64 libscotch-6.0 arm64 6.0.9-1 [361 kB] Get:113 http://ftpmaster.internal/ubuntu groovy/universe arm64 openmpi-common all 4.0.3-6ubuntu2 [151 kB] Get:114 http://ftpmaster.internal/ubuntu groovy/universe arm64 openmpi-bin arm64 4.0.3-6ubuntu2 [66.6 kB] Get:115 http://ftpmaster.internal/ubuntu groovy/main arm64 python-babel-localedata all 2.8.0+dfsg.1-4 [4985 kB] Get:116 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-all arm64 3.8.2-0ubuntu2 [1104 B] Get:117 http://ftpmaster.internal/ubuntu groovy/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2ubuntu2 [154 kB] Get:118 http://ftpmaster.internal/ubuntu groovy/main arm64 python3.8-dev arm64 3.8.6-1 [515 kB] Get:119 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-dev arm64 3.8.2-0ubuntu2 [1212 B] Get:120 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-all-dev arm64 3.8.2-0ubuntu2 [1112 B] Get:121 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-appdirs all 1.4.4-1 [11.0 kB] Get:122 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-atomicwrites all 1.4.0-1 [10.2 kB] Get:123 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-attr all 19.3.0-5 [33.8 kB] Get:124 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-tz all 2020.1-2 [31.6 kB] Get:125 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-babel all 2.8.0+dfsg.1-4 [84.9 kB] Get:126 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-beaker all 1.10.0-3 [40.3 kB] Get:127 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-certifi all 2020.4.5.1-1 [151 kB] Get:128 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-chardet all 3.0.4-7 [80.2 kB] Get:129 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-markupsafe arm64 1.1.1-1 [13.9 kB] Get:130 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-mako all 1.1.2+ds1-1 [59.3 kB] Get:131 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-numpy arm64 1:1.18.4-1ubuntu1 [3303 kB] Get:132 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] Get:133 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-six all 1.15.0-1 [12.0 kB] Get:134 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-pytools all 2019.1.1-2 [38.1 kB] Get:135 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-compyle all 0.6-1 [76.7 kB] Get:136 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-cyarray arm64 1.1-2build1 [99.4 kB] Get:137 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-roman all 2.0.0-5 [8928 B] Get:138 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-docutils all 0.16+dfsg-3 [369 kB] Get:139 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-h5py-serial arm64 2.10.0-9 [613 kB] Get:140 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-h5py all 2.10.0-9 [4816 B] Get:141 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-idna all 2.10-1 [35.2 kB] Get:142 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-imagesize all 1.2.0-2 [5868 B] Get:143 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-more-itertools all 4.2.0-3 [39.8 kB] Get:144 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-zipp all 1.0.0-3 [5440 B] Get:145 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-importlib-metadata all 1.6.0-2 [10.3 kB] Get:146 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-jinja2 all 2.11.2-1 [99.8 kB] Get:147 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-nose all 1.3.7-7 [116 kB] Get:148 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-pyparsing all 2.4.7-1 [61.4 kB] Get:149 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-packaging all 20.4-1 [27.4 kB] Get:150 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-pluggy all 0.13.0-5 [18.6 kB] Get:151 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-py all 1.9.0-1 [71.9 kB] Get:152 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-pygments all 2.3.1+dfsg-4 [581 kB] Get:153 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-wcwidth all 0.1.9+dfsg1-2 [17.7 kB] Get:154 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-pytest all 4.6.11-1 [178 kB] Get:155 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-setuptools all 49.3.1-2 [453 kB] Get:156 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-pytest-runner all 2.11.1-1.2 [7524 B] Get:157 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-python-utils arm64 2.3.0-2 [11.5 kB] Get:158 http://ftpmaster.internal/ubuntu groovy/universe arm64 mpi-default-bin arm64 1.13 [2968 B] Get:159 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-mpi4py arm64 3.0.3-6 [350 kB] Get:160 http://ftpmaster.internal/ubuntu groovy/universe arm64 libtrilinos-zoltan12 arm64 12.14.1-4build1 [323 kB] Get:161 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-pyzoltan arm64 1.0.1-2 [119 kB] Get:162 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-urllib3 all 1.25.9-1 [88.8 kB] Get:163 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-requests all 2.23.0+dfsg-2 [50.9 kB] Get:164 http://ftpmaster.internal/ubuntu groovy/main arm64 sphinx-common all 3.2.1-1 [574 kB] Get:165 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-alabaster all 0.7.8-1.1 [18.6 kB] Get:166 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-sphinx all 3.2.1-1 [534 kB] Get:167 http://ftpmaster.internal/ubuntu groovy/main arm64 sphinx-rtd-theme-common all 0.5.0+dfsg-1ubuntu1 [991 kB] Get:168 http://ftpmaster.internal/ubuntu groovy/main arm64 python3-sphinx-rtd-theme all 0.5.0+dfsg-1ubuntu1 [15.1 kB] Get:169 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-stl arm64 2.9.0-1build3 [39.3 kB] Get:170 http://ftpmaster.internal/ubuntu groovy/universe arm64 python3-traits arm64 5.2.0-2build1 [229 kB] Get:171 http://ftpmaster.internal/ubuntu groovy/main arm64 libnuma-dev arm64 2.0.12-1build1 [33.3 kB] Get:172 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhwloc-dev arm64 2.2.0+dfsg-3 [191 kB] Get:173 http://ftpmaster.internal/ubuntu groovy/main arm64 libibverbs-dev arm64 31.0-1 [532 kB] Get:174 http://ftpmaster.internal/ubuntu groovy/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] Get:175 http://ftpmaster.internal/ubuntu groovy/universe arm64 libopenmpi-dev arm64 4.0.3-6ubuntu2 [813 kB] Get:176 http://ftpmaster.internal/ubuntu groovy/universe arm64 trilinos-dev arm64 12.14.1-4build1 [12.4 kB] Get:177 http://ftpmaster.internal/ubuntu groovy/universe arm64 libtrilinos-zoltan-dev arm64 12.14.1-4build1 [31.6 kB] Get:178 http://ftpmaster.internal/ubuntu groovy/universe arm64 mpi-default-dev arm64 1.13 [3748 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 87.7 MB in 5s (18.4 MB/s) Selecting previously unselected package libpython3.8-minimal:arm64. 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No schema files found: doing nothing. Setting up libdebhelper-perl (13.2.1ubuntu1) ... Setting up libmagic1:arm64 (1:5.38-5) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-5) ... Setting up libcbor0.6:arm64 (0.6.0-0ubuntu3) ... Setting up libaec0:arm64 (1.0.4-1) ... Setting up python-babel-localedata (2.8.0+dfsg.1-4) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:arm64 (3.9.0-3ubuntu1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.2.9-1build1) ... Setting up libx11-data (2:1.6.10-3) ... Setting up liblzf1:arm64 (3.6-2) ... Setting up libsigsegv2:arm64 (2.12-2build1) ... Setting up libhwloc15:arm64 (2.2.0+dfsg-3) ... Setting up libevent-core-2.1-7:arm64 (2.1.12-stable-1) ... Setting up libevent-2.1-7:arm64 (2.1.12-stable-1) ... Setting up autopoint (0.19.8.1-10build1) ... 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Setting up libpython3-stdlib:arm64 (3.8.2-0ubuntu2) ... Setting up libjs-underscore (1.9.1~dfsg-1) ... Setting up gcc-9-base:arm64 (9.3.0-18ubuntu1) ... Setting up libevent-pthreads-2.1-7:arm64 (2.1.12-stable-1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libxdmcp6:arm64 (1:1.1.3-0ubuntu1) ... Setting up libevent-extra-2.1-7:arm64 (2.1.12-stable-1) ... Setting up liblapack3:arm64 (3.9.0-3ubuntu1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb1:arm64 (1.14-2) ... Setting up libtool (2.4.6-14) ... Setting up libedit2:arm64 (3.1-20191231-1) ... Setting up libevent-openssl-2.1-7:arm64 (2.1.12-stable-1) ... Setting up m4 (1.4.18-4) ... Setting up python3 (3.8.2-0ubuntu2) ... Setting up python3-markupsafe (1.1.1-1) ... Setting up python3-tz (2020.1-2) ... Setting up python3-atomicwrites (1.4.0-1) ... 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Setting up ibverbs-providers:arm64 (31.0-1) ... Setting up python3-babel (2.8.0+dfsg.1-4) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-python-utils (2.3.0-2) ... Setting up openssh-client (1:8.3p1-1) ... Setting up python3-alabaster (0.7.8-1.1) ... Setting up libxext6:arm64 (2:1.3.4-0ubuntu1) ... Setting up python3-all (3.8.2-0ubuntu2) ... Setting up python3-zipp (1.0.0-3) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3-nose (1.3.7-7) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxnvctrl0:arm64 (440.82-0ubuntu1) ... Setting up libgcc-9-dev:arm64 (9.3.0-18ubuntu1) ... Setting up libnl-route-3-dev:arm64 (3.4.0-1) ... Setting up libltdl-dev:arm64 (2.4.6-14) ... Setting up python3-pygments (2.3.1+dfsg-4) ... Setting up python3-packaging (20.4-1) ... Setting up python3-chardet (3.0.4-7) ... Setting up libpython3.8-dev:arm64 (3.8.6-1) ... Setting up python3-requests (2.23.0+dfsg-2) ... Setting up python3-numpy (1:1.18.4-1ubuntu1) ... Setting up libjs-sphinxdoc (3.2.1-1) ... Setting up python3.8-dev (3.8.6-1) ... Setting up python3-pytest-runner (2.11.1-1.2) ... Setting up libhwloc-dev:arm64 (2.2.0+dfsg-3) ... Setting up gcc-9 (9.3.0-18ubuntu1) ... Setting up libpython3-dev:arm64 (3.8.2-0ubuntu2) ... Setting up python3-importlib-metadata (1.6.0-2) ... Setting up python3-stl (2.9.0-1build3) ... Setting up po-debconf (1.0.21) ... Setting up libgfortran-9-dev:arm64 (9.3.0-18ubuntu1) ... Setting up python3-h5py-serial (2.10.0-9) ... Setting up libibverbs-dev:arm64 (31.0-1) ... Setting up libhwloc-plugins:arm64 (2.2.0+dfsg-3) ... Setting up python3-cyarray (1.1-2build1) ... Setting up libpython3-all-dev:arm64 (3.8.2-0ubuntu2) ... Setting up sphinx-common (3.2.1-1) ... Setting up python3-dev (3.8.2-0ubuntu2) ... Setting up python3-h5py (2.10.0-9) ... Setting up python3-pytools (2019.1.1-2) ... Setting up python3-pluggy (0.13.0-5) ... Setting up python3-all-dev (3.8.2-0ubuntu2) ... Setting up gfortran-9 (9.3.0-18ubuntu1) ... Setting up libpmix2:arm64 (3.1.5-1) ... Setting up python3-pytest (4.6.11-1) ... Setting up libopenmpi3:arm64 (4.0.3-6ubuntu2) ... Setting up python3-compyle (0.6-1) ... /usr/lib/python3/dist-packages/compyle/parallel.py:880: SyntaxWarning: "is" with a literal. Did you mean "=="? if func_type is 'input': /usr/lib/python3/dist-packages/compyle/parallel.py:984: SyntaxWarning: "is" with a literal. Did you mean "=="? if func_type is 'input': /usr/lib/python3/dist-packages/compyle/parallel.py:1084: SyntaxWarning: "is" with a literal. Did you mean "=="? return_type = 'void' if func_type is 'output' else self.type Setting up libptscotch-6.0:arm64 (6.0.9-1) ... Setting up openmpi-bin (4.0.3-6ubuntu2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libtrilinos-zoltan12:arm64 (12.14.1-4build1) ... Setting up mpi-default-bin (1.13) ... Setting up python3-mpi4py (3.0.3-6) ... Setting up libtrilinos-zoltan-dev:arm64 (12.14.1-4build1) ... Setting up libopenmpi-dev:arm64 (4.0.3-6ubuntu2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up python3-pyzoltan (1.0.1-2) ... Setting up mpi-default-dev (1.13) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.2.1ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu3) ... Processing triggers for sgml-base (1.30) ... Setting up docutils-common (0.16+dfsg-3) ... Processing triggers for sgml-base (1.30) ... Setting up python3-docutils (0.16+dfsg-3) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python3-sphinx (3.2.1-1) ... Setting up python3-sphinx-rtd-theme (0.5.0+dfsg-1ubuntu1) ... Setting up sbuild-build-depends-pysph-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-118-generic arm64 (aarch64) Toolchain package versions: binutils_2.35.1-1ubuntu1 dpkg-dev_1.20.5ubuntu2 g++-10_10.2.0-11ubuntu1 gcc-10_10.2.0-11ubuntu1 gcc-9_9.3.0-18ubuntu1 libc6-dev_2.32-0ubuntu3 libstdc++-10-dev_10.2.0-11ubuntu1 libstdc++6_10.2.0-11ubuntu1 linux-libc-dev_5.8.0-20.21 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.10 autoconf_2.69-11.1 automake_1:1.16.2-4ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu13 base-passwd_3.5.47 bash_5.0-6ubuntu2 binutils_2.35.1-1ubuntu1 binutils-aarch64-linux-gnu_2.35.1-1ubuntu1 binutils-common_2.35.1-1ubuntu1 bsdextrautils_2.36-3ubuntu1 bsdutils_1:2.36-3ubuntu1 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 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libhwloc-dev_2.2.0+dfsg-3 libhwloc-plugins_2.2.0+dfsg-3 libhwloc15_2.2.0+dfsg-3 libibverbs-dev_31.0-1 libibverbs1_31.0-1 libicu67_67.1-4 libidn2-0_2.3.0-1 libip4tc2_1.8.5-3ubuntu1 libisl22_0.22.1-1 libitm1_10.2.0-11ubuntu1 libjs-jquery_3.5.1+dfsg-4 libjs-mathjax_2.7.9+dfsg-1 libjs-sphinxdoc_3.2.1-1 libjs-underscore_1.9.1~dfsg-1 libjson-c4_0.13.1+dfsg-9 libjson-c5_0.15-1 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-3_1.17-10 libkrb5support0_1.17-10 liblapack3_3.9.0-3ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.2.0-11ubuntu1 libltdl-dev_2.4.6-14 libltdl7_2.4.6-14 liblz4-1_1.9.2-2 liblzf1_3.6-2 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3ubuntu1 libmpc3_1.2.0~rc1-1 libmpfr6_4.1.0-3 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle8_3.6-2 libnl-3-200_3.4.0-1 libnl-3-dev_3.4.0-1 libnl-route-3-200_3.4.0-1 libnl-route-3-dev_3.4.0-1 libnpth0_1.6-2 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libnuma-dev_2.0.12-1build1 libnuma1_2.0.12-1build1 libopenmpi-dev_4.0.3-6ubuntu2 libopenmpi3_4.0.3-6ubuntu2 libp11-kit0_0.23.21-2build1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpciaccess0_0.16-1 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libpmix2_3.1.5-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5ubuntu1 libptscotch-6.0_6.0.9-1 libpython3-all-dev_3.8.2-0ubuntu2 libpython3-dev_3.8.2-0ubuntu2 libpython3-stdlib_3.8.2-0ubuntu2 libpython3.8_3.8.6-1 libpython3.8-dev_3.8.6-1 libpython3.8-minimal_3.8.6-1 libpython3.8-stdlib_3.8.6-1 libreadline8_8.0-4 libscotch-6.0_6.0.9-1 libseccomp2_2.4.3-1ubuntu4 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsmartcols1_2.36-3ubuntu1 libsqlite3-0_3.33.0-1 libss2_1.45.6-1ubuntu1 libssl1.1_1.1.1f-1ubuntu4 libstdc++-10-dev_10.2.0-11ubuntu1 libstdc++6_10.2.0-11ubuntu1 libsub-override-perl_0.09-2 libsystemd0_246.6-1ubuntu1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtirpc-common_1.2.6-1build1 libtirpc-dev_1.2.6-1build1 libtirpc3_1.2.6-1build1 libtool_2.4.6-14 libtrilinos-zoltan-dev_12.14.1-4build1 libtrilinos-zoltan12_12.14.1-4build1 libtsan0_10.2.0-11ubuntu1 libubsan1_10.2.0-11ubuntu1 libuchardet0_0.0.7-1 libudev1_246.6-1ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36-3ubuntu1 libx11-6_2:1.6.10-3 libx11-data_2:1.6.10-3 libxau6_1:1.0.9-0ubuntu1 libxcb1_1.14-2 libxdmcp6_1:1.1.3-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxml2_2.9.10+dfsg-5build1 libxnvctrl0_440.82-0ubuntu1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.0-20.21 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu6 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mime-support_3.64ubuntu1 mount_2.36-3ubuntu1 mpi-default-bin_1.13 mpi-default-dev_1.13 ncurses-base_6.2-1 ncurses-bin_6.2-1 node-jquery_3.5.1+dfsg-4 ocl-icd-libopencl1_2.2.11-1ubuntu1 openmpi-bin_4.0.3-6ubuntu2 openmpi-common_4.0.3-6ubuntu2 openssh-client_1:8.3p1-1 openssl_1.1.1f-1ubuntu4 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu6 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4build1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu1 python-babel-localedata_2.8.0+dfsg.1-4 python3_3.8.2-0ubuntu2 python3-alabaster_0.7.8-1.1 python3-all_3.8.2-0ubuntu2 python3-all-dev_3.8.2-0ubuntu2 python3-appdirs_1.4.4-1 python3-atomicwrites_1.4.0-1 python3-attr_19.3.0-5 python3-babel_2.8.0+dfsg.1-4 python3-beaker_1.10.0-3 python3-certifi_2020.4.5.1-1 python3-chardet_3.0.4-7 python3-compyle_0.6-1 python3-cyarray_1.1-2build1 python3-decorator_4.4.2-0ubuntu1 python3-dev_3.8.2-0ubuntu2 python3-distutils_3.8.5-1 python3-docutils_0.16+dfsg-3 python3-h5py_2.10.0-9 python3-h5py-serial_2.10.0-9 python3-idna_2.10-1 python3-imagesize_1.2.0-2 python3-importlib-metadata_1.6.0-2 python3-jinja2_2.11.2-1 python3-lib2to3_3.8.5-1 python3-mako_1.1.2+ds1-1 python3-markupsafe_1.1.1-1 python3-minimal_3.8.2-0ubuntu2 python3-more-itertools_4.2.0-3 python3-mpi4py_3.0.3-6 python3-nose_1.3.7-7 python3-numpy_1:1.18.4-1ubuntu1 python3-packaging_20.4-1 python3-pkg-resources_49.3.1-2 python3-pluggy_0.13.0-5 python3-py_1.9.0-1 python3-pygments_2.3.1+dfsg-4 python3-pyparsing_2.4.7-1 python3-pytest_4.6.11-1 python3-pytest-runner_2.11.1-1.2 python3-python-utils_2.3.0-2 python3-pytools_2019.1.1-2 python3-pyzoltan_1.0.1-2 python3-requests_2.23.0+dfsg-2 python3-roman_2.0.0-5 python3-setuptools_49.3.1-2 python3-six_1.15.0-1 python3-sphinx_3.2.1-1 python3-sphinx-rtd-theme_0.5.0+dfsg-1ubuntu1 python3-stl_2.9.0-1build3 python3-traits_5.2.0-2build1 python3-tz_2020.1-2 python3-urllib3_1.25.9-1 python3-wcwidth_0.1.9+dfsg1-2 python3-zipp_1.0.0-3 python3.8_3.8.6-1 python3.8-dev_3.8.6-1 python3.8-minimal_3.8.6-1 readline-common_8.0-4 rpcsvc-proto_1.4.2-0ubuntu3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pysph-dummy_0.invalid.0 sed_4.7-1build1 sensible-utils_0.0.13 sgml-base_1.30 sphinx-common_3.2.1-1 sphinx-rtd-theme-common_0.5.0+dfsg-1ubuntu1 systemd_246.6-1ubuntu1 systemd-sysv_246.6-1ubuntu1 systemd-timesyncd_246.6-1ubuntu1 sysvinit-utils_2.96-3ubuntu1 tar_1.30+dfsg-7 trilinos-dev_12.14.1-4build1 tzdata_2020a-0ubuntu1 ubuntu-keyring_2020.06.17.1 util-linux_2.36-3ubuntu1 xml-core_0.18+nmu1 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu2 zlib1g-dev_1:1.2.11.dfsg-2ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sun Apr 19 18:38:27 2020 UTC gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pysph_1.0~b0~20191115.gite3d5e10-2.dsc dpkg-source: info: extracting pysph in /<> dpkg-source: info: unpacking pysph_1.0~b0~20191115.gite3d5e10.orig.tar.gz dpkg-source: info: unpacking pysph_1.0~b0~20191115.gite3d5e10-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Use-local-mathjax.patch dpkg-source: info: applying 0002-autodoc_mock_imports.patch dpkg-source: info: applying 0003-Use-Python-3-in-Makefile.patch dpkg-source: info: applying 0004-Fix-nprocs.patch dpkg-source: info: applying 0005-Spelling.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20043443 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20043443 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20043443 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package pysph dpkg-buildpackage: info: source version 1.0~b0~20191115.gite3d5e10-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean I: pybuild base:217: python3.8 setup.py clean ---------------------------------------------------------------------- Using OpenMP. ---------------------------------------------------------------------- running clean removing '/<>/.pybuild/cpython3_3.8/build' (and everything under it) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/tmpzy2qh4r7/check_omp.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3.8/distutils/extension.py:131: UserWarning: Unknown Extension options: 'cython_compile_time_env' warnings.warn(msg) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.8' does not exist -- can't clean it /usr/bin/make clean make[2]: Entering directory '/<>' python3 setup.py clean ---------------------------------------------------------------------- Using OpenMP. ---------------------------------------------------------------------- running clean /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/tmpwwwblzv0/check_omp.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3.8/distutils/extension.py:131: UserWarning: Unknown Extension options: 'cython_compile_time_env' warnings.warn(msg) for dir in /<>/pysph/base /<>/pysph/sph /<>/pysph/sph/solid_mech /<>/pysph/parallel; do rm -f $dir/*.c; done for dir in /<>/pysph/base /<>/pysph/sph /<>/pysph/sph/solid_mech /<>/pysph/parallel; do rm -f $dir/*.cpp; done make[2]: Leaving directory '/<>' /usr/bin/make -C docs clean make[2]: Entering directory '/<>/docs' rm -rf build/* make[2]: Leaving directory '/<>/docs' rm -f -r PySPH.egg-info rm -f pysph/base/gpu_helper_functions rm -f pysph/base/stratified_sfc_gpu_nnps rm -f pysph/base/z_order_gpu_nnps rm -f pysph/tools/geometry_stl.cpp find . -name '*.pyc' -delete rm -f -r .pytest_cache make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:217: python3.8 setup.py config ---------------------------------------------------------------------- Using OpenMP. ---------------------------------------------------------------------- ---------------------------------------------------------------------- Using Zoltan from: /usr/include/trilinos /usr/lib ---------------------------------------------------------------------- Warning: passing language='c++' to cythonize() is deprecated. Instead, put "# distutils: language=c++" in your .pyx or .pxd file(s) Compiling pysph/base/particle_array.pyx because it changed. Compiling pysph/base/point.pyx because it changed. Compiling pysph/base/nnps_base.pyx because it changed. Compiling pysph/base/linked_list_nnps.pyx because it changed. Compiling pysph/base/box_sort_nnps.pyx because it changed. Compiling pysph/base/spatial_hash_nnps.pyx because it changed. Compiling pysph/base/cell_indexing_nnps.pyx because it changed. Compiling pysph/base/z_order_nnps.pyx because it changed. Compiling pysph/base/stratified_hash_nnps.pyx because it changed. Compiling pysph/base/stratified_sfc_nnps.pyx because it changed. Compiling pysph/base/octree.pyx because it changed. Compiling pysph/base/octree_nnps.pyx because it changed. Compiling pysph/base/c_kernels.pyx because it changed. Compiling pysph/base/linalg3.pyx because it changed. Compiling pysph/tools/geometry_stl.pyx because it changed. Compiling pysph/parallel/parallel_manager.pyx because it changed. [ 1/16] Cythonizing pysph/base/box_sort_nnps.pyx [ 2/16] Cythonizing pysph/base/c_kernels.pyx [ 3/16] Cythonizing pysph/base/cell_indexing_nnps.pyx [ 4/16] Cythonizing pysph/base/linalg3.pyx [ 5/16] Cythonizing pysph/base/linked_list_nnps.pyx [ 6/16] Cythonizing pysph/base/nnps_base.pyx [ 7/16] Cythonizing pysph/base/octree.pyx [ 8/16] Cythonizing pysph/base/octree_nnps.pyx [ 9/16] Cythonizing pysph/base/particle_array.pyx [10/16] Cythonizing pysph/base/point.pyx [11/16] Cythonizing pysph/base/spatial_hash_nnps.pyx [12/16] Cythonizing pysph/base/stratified_hash_nnps.pyx [13/16] Cythonizing pysph/base/stratified_sfc_nnps.pyx [14/16] Cythonizing pysph/base/z_order_nnps.pyx [15/16] Cythonizing pysph/parallel/parallel_manager.pyx [16/16] Cythonizing pysph/tools/geometry_stl.pyx running config /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/tmpj8qir_ty/check_omp.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/box_sort_nnps.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/c_kernels.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/cell_indexing_nnps.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/linalg3.pxd tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/linked_list_nnps.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared warning: pysph/base/linked_list_nnps.pyx:308:12: Unreachable code warning: pysph/base/linked_list_nnps.pyx:338:12: Unreachable code /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/nnps_base.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/octree.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/octree_nnps.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/particle_array.pxd tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/point.pxd tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/spatial_hash_nnps.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/stratified_hash_nnps.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/stratified_sfc_nnps.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared warning: pysph/base/stratified_sfc_nnps.pxd:22:27: Declarations should not be declared inline. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/base/z_order_nnps.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared warning: pysph/base/z_order_nnps.pxd:13:27: Declarations should not be declared inline. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/parallel/parallel_manager.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: pysph/base/nnps_base.pxd:25:13: 'INT_MAX' redeclared warning: pysph/parallel/parallel_manager.pyx:30:13: 'INT_MAX' redeclared /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/pysph/tools/geometry_stl.pyx tree = Parsing.p_module(s, pxd, full_module_name) debian/rules override_dh_auto_build make[1]: Entering directory '/<>' I: pybuild base:217: echo '/<>/.pybuild/cpython3_3.8/build' dh_auto_build I: pybuild base:217: /usr/bin/python3 setup.py build ---------------------------------------------------------------------- Using OpenMP. ---------------------------------------------------------------------- ---------------------------------------------------------------------- Using Zoltan from: /usr/include/trilinos /usr/lib ---------------------------------------------------------------------- Warning: passing language='c++' to cythonize() is deprecated. Instead, put "# distutils: language=c++" in your .pyx or .pxd file(s) running build running build_py creating /<>/.pybuild/cpython3_3.8/build/pysph copying pysph/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph creating /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/rigid_body.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/acceleration_eval.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/integrator_cython_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/iisph.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/surface_tension.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/equation.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/scheme.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/integrator.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/boundary_equations.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/sph_compiler.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/integrator_gpu_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/acceleration_eval_gpu_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/integrator_step.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/acceleration_nnps_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/basic_equations.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/acceleration_eval_cython_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph creating /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/application.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/tools.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/controller.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/solver.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/vtk_output.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/output.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/solver_interfaces.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/utils.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver copying pysph/solver/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver creating /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/fortranfile.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/gmsh.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/geometry.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/pysph_to_vtk.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/mayavi_viewer.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/run_parallel_script.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/ndspmhd.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/pprocess.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/cull.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/binder.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/uniform_distribution.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/sphysics.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/geometry_utils.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/ipy_viewer.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/cli.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/sph_evaluator.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/tools/interpolator.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools creating /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/trivial_inlet_outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/lattice_cylinders.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/db_exp_data.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/poiseuille.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/cube.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/periodic_cylinders.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/ghia_cavity_data.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/dam_break_3d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/dam_break_2d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/rayleigh_taylor.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/_db_geometry.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/two_blocks.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/hydrostatic_tank.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/cavity.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/taylor_green.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/couette.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/elliptical_drop_no_scheme.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/elliptical_drop_simple.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/elliptical_drop.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/run.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples copying pysph/examples/flow_past_cylinder_2d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples creating /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/gpu_helper_kernels.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/kernels.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/gpu_nnps_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/z_order_gpu_nnps_kernels.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/reduce_array.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/nnps.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/utils.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/gpu_nnps.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/device_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/gpu_domain_manager.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base creating /<>/.pybuild/cpython3_3.8/build/pysph/parallel copying pysph/parallel/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/misc copying pysph/sph/misc/advection.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/misc copying pysph/sph/misc/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/misc creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/solid_mech copying pysph/sph/solid_mech/hvi.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/solid_mech copying pysph/sph/solid_mech/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/solid_mech copying pysph/sph/solid_mech/basic.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/solid_mech creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/kernel_correction.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/crksph.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/parshikov.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/linalg.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/transport_velocity.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/density_correction.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/basic.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/edac.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/pcisph.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/gtvf.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/shift.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/viscosity.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc copying pysph/sph/wc/zhanghuadams.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/wc creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_multi_group_integrator.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_integrator_cython_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_integrator.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_linalg.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_equations.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_acceleration_eval.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_riemann_solver.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_scheme.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_acceleration_eval_cython_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_integrator_step.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests copying pysph/sph/tests/test_kernel_corrections.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/tests creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/isph copying pysph/sph/isph/sisph.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/isph copying pysph/sph/isph/isph.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/isph copying pysph/sph/isph/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/isph copying pysph/sph/isph/wall_normal.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/isph creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc copying pysph/sph/bc/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc copying pysph/sph/bc/inlet_outlet_manager.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc copying pysph/sph/bc/interpolate.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/gas_dynamics copying pysph/sph/gas_dynamics/riemann_solver.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/gas_dynamics copying pysph/sph/gas_dynamics/gsph.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/gas_dynamics copying pysph/sph/gas_dynamics/boundary_equations.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/gas_dynamics copying pysph/sph/gas_dynamics/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/gas_dynamics copying pysph/sph/gas_dynamics/basic.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/gas_dynamics creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/donothing copying pysph/sph/bc/donothing/outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/donothing copying pysph/sph/bc/donothing/simple_inlet_outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/donothing copying pysph/sph/bc/donothing/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/donothing copying pysph/sph/bc/donothing/inlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/donothing creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/tests copying pysph/sph/bc/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/tests copying pysph/sph/bc/tests/test_simple_inlet_outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/tests creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mod_donothing copying pysph/sph/bc/mod_donothing/outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mod_donothing copying pysph/sph/bc/mod_donothing/simple_inlet_outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mod_donothing copying pysph/sph/bc/mod_donothing/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mod_donothing copying pysph/sph/bc/mod_donothing/inlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mod_donothing creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/hybrid copying pysph/sph/bc/hybrid/outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/hybrid copying pysph/sph/bc/hybrid/simple_inlet_outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/hybrid copying pysph/sph/bc/hybrid/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/hybrid copying pysph/sph/bc/hybrid/inlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/hybrid creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/characteristic copying pysph/sph/bc/characteristic/outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/characteristic copying pysph/sph/bc/characteristic/simple_inlet_outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/characteristic copying pysph/sph/bc/characteristic/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/characteristic copying pysph/sph/bc/characteristic/inlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/characteristic creating /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mirror copying pysph/sph/bc/mirror/outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mirror copying pysph/sph/bc/mirror/simple_inlet_outlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mirror copying pysph/sph/bc/mirror/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mirror copying pysph/sph/bc/mirror/inlet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc/mirror creating /<>/.pybuild/cpython3_3.8/build/pysph/solver/tests copying pysph/solver/tests/test_application.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver/tests copying pysph/solver/tests/test_solver.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver/tests copying pysph/solver/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver/tests copying pysph/solver/tests/test_solver_utils.py -> /<>/.pybuild/cpython3_3.8/build/pysph/solver/tests creating /<>/.pybuild/cpython3_3.8/build/pysph/tools/tests copying pysph/tools/tests/test_geometry.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools/tests copying pysph/tools/tests/test_interpolator.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools/tests copying pysph/tools/tests/test_geometry_stl.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools/tests copying pysph/tools/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools/tests copying pysph/tools/tests/test_sph_evaluator.py -> /<>/.pybuild/cpython3_3.8/build/pysph/tools/tests creating /<>/.pybuild/cpython3_3.8/build/pysph/examples/solid_mech copying pysph/examples/solid_mech/impact.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/solid_mech copying pysph/examples/solid_mech/oscillating_plate.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/solid_mech copying pysph/examples/solid_mech/rings.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/solid_mech copying pysph/examples/solid_mech/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/solid_mech copying pysph/examples/solid_mech/impact3d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/solid_mech copying pysph/examples/solid_mech/taylor_bar.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/solid_mech creating /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/cubes_colliding_in_tank.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/simple.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/solid_body_floating_in_tank.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/bouncing_cubes.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/dam_break3D_sph.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/bouncing_cube.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/three_spheres_in_fluid.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/sphere_in_vessel_akinci.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/three_cubes_in_vessel_3d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/rigid_body/ten_spheres_in_vessel_2d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body creating /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/beach_geometry.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/case7.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/case1.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/case4.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/case3.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/case2.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/case6.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/case5.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/dam_break.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/dambreak_sphysics.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/periodic_rigidbody.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/case8.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics creating /<>/.pybuild/cpython3_3.8/build/pysph/examples/tests copying pysph/examples/tests/test_riemann_solver.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/tests copying pysph/examples/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/tests copying pysph/examples/tests/test_examples.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/tests creating /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/sedov.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/riemann_solver.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/robert.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/noh.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/wallshock.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/riemann_2d_config.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/riemann_2d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/blastwave.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/shocktube_setup.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/acoustic_wave.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/hydrostatic_box.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/accuracy_test_2d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/wc_blastwave.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/sjogreen.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/kelvin_helmholtz_instability.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/cheng_shu_1d.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/shocktube.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/examples/gas_dynamics/sod_shocktube.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics creating /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/equilibrium_rod_hex.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/square_droplet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/khi_sy11.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/circular_droplet.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/interface_instability.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/khi_tvf.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/capillary_wave.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/oscillating_rod.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension copying pysph/examples/surface_tension/equilibrium_rod.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/surface_tension creating /<>/.pybuild/cpython3_3.8/build/pysph/examples/spheric copying pysph/examples/spheric/moving_square.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/spheric copying pysph/examples/spheric/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/spheric creating /<>/.pybuild/cpython3_3.8/build/pysph/base/tree copying pysph/base/tree/tree.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tree copying pysph/base/tree/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tree copying pysph/base/tree/helpers.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tree copying pysph/base/tree/point_tree.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tree creating /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_linalg3.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_reduce_array.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_utils.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_periodic_nnps.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_kernel.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_domain_manager.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_octree.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_nnps.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_neighbor_cache.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_device_helper.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests copying pysph/base/tests/test_particle_array.py -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tests creating /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/test_parallel.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/test_openmp.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/example_test_case.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/test_parallel_run.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/reduce_array.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/simple_reduction.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/lb_exchange.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/remote_exchange.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/cavity.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/summation_density.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/check_dump_load.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests copying pysph/parallel/tests/elliptical_drop.py -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel/tests running egg_info creating PySPH.egg-info writing PySPH.egg-info/PKG-INFO writing dependency_links to PySPH.egg-info/dependency_links.txt writing entry points to PySPH.egg-info/entry_points.txt writing requirements to PySPH.egg-info/requires.txt writing top-level names to PySPH.egg-info/top_level.txt writing manifest file 'PySPH.egg-info/SOURCES.txt' reading manifest file 'PySPH.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/tmpeu13z4kh/check_omp.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: no files found matching '*.bat' warning: no files found matching '*.sh' warning: no files found matching '*.toml' warning: no files found matching '*.txt.gz' under directory 'pysph' writing manifest file 'PySPH.egg-info/SOURCES.txt' copying pysph/sph/acceleration_eval_cython.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/acceleration_eval_gpu.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/sph/integrator_cython.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/sph copying pysph/tools/geometry_stl.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/tools copying pysph/base/box_sort_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/box_sort_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/c_kernels.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/c_kernels.pyx.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/cell_indexing_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/cell_indexing_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/gpu_helper_functions.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/gpu_nnps_base.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/gpu_nnps_base.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/linalg3.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/linalg3.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/linked_list_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/linked_list_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/nnps_base.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/nnps_base.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/octree.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/octree.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/octree_gpu_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/octree_gpu_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/octree_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/octree_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/particle_array.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/particle_array.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/point.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/point.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/spatial_hash.h -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/spatial_hash_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/spatial_hash_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/stratified_hash_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/stratified_hash_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/stratified_sfc_gpu_nnps.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/stratified_sfc_gpu_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/stratified_sfc_gpu_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/stratified_sfc_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/stratified_sfc_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/z_order.h -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/z_order_gpu_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/z_order_gpu_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/z_order_nnps.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/base/z_order_nnps.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/base copying pysph/parallel/parallel_manager.pxd -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel copying pysph/parallel/parallel_manager.pyx -> /<>/.pybuild/cpython3_3.8/build/pysph/parallel copying pysph/sph/bc/interpolate.py.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/sph/bc copying pysph/examples/rigid_body/sph.vtk.gz -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/rigid_body copying pysph/examples/sphysics/INDAT.gz -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/sphysics/IPART.gz -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/sphysics copying pysph/examples/gas_dynamics/ndspmhd-sedov-initial-conditions.npz -> /<>/.pybuild/cpython3_3.8/build/pysph/examples/gas_dynamics copying pysph/base/tree/point_tree.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tree copying pysph/base/tree/tree.mako -> /<>/.pybuild/cpython3_3.8/build/pysph/base/tree running build_ext building 'pysph.base.particle_array' extension creating build creating build/temp.linux-arm64-3.8 creating build/temp.linux-arm64-3.8/pysph creating build/temp.linux-arm64-3.8/pysph/base aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/particle_array.cpp -o build/temp.linux-arm64-3.8/pysph/base/particle_array.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/particle_array.cpp:645: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/particle_array.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/particle_array.cpython-38-aarch64-linux-gnu.so building 'pysph.base.point' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/point.cpp -o build/temp.linux-arm64-3.8/pysph/base/point.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/point.cpp:645: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/point.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/point.cpython-38-aarch64-linux-gnu.so building 'pysph.base.nnps_base' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/nnps_base.cpp -o build/temp.linux-arm64-3.8/pysph/base/nnps_base.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/nnps_base.cpp:655: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/nnps_base.cpp: In function ‘int __pyx_pf_5pysph_4base_9nnps_base_13NeighborCache___init__(__pyx_obj_5pysph_4base_9nnps_base_NeighborCache*, __pyx_obj_5pysph_4base_9nnps_base_NNPS*, int, int)’: pysph/base/nnps_base.cpp:21498:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 21498 | for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_6; __pyx_t_7+=1) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/nnps_base.cpp:21583:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 21583 | for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_8; __pyx_t_7+=1) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/nnps_base.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9nnps_base_13NeighborCache_update(__pyx_obj_5pysph_4base_9nnps_base_NeighborCache*, int)’: pysph/base/nnps_base.cpp:22494:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 22494 | for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_7; __pyx_t_8+=1) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/nnps_base.cpp:22543:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 22543 | for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_9; __pyx_t_8+=1) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/nnps_base.cpp: In function ‘void __pyx_f_5pysph_4base_9nnps_base_4NNPS__sort_neighbors(__pyx_obj_5pysph_4base_9nnps_base_NNPS*, unsigned int*, size_t, unsigned int*)’: pysph/base/nnps_base.cpp:28615:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28615 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/nnps_base.cpp:28646:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28646 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/nnps_base.cpp:28699:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28699 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/nnps_base.cpp:28757:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28757 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ~~~~~~~~~~^~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/nnps_base.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/nnps_base.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.linked_list_nnps' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/linked_list_nnps.cpp -o build/temp.linux-arm64-3.8/pysph/base/linked_list_nnps.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/linked_list_nnps.cpp:671: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/linked_list_nnps.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/linked_list_nnps.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.box_sort_nnps' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/box_sort_nnps.cpp -o build/temp.linux-arm64-3.8/pysph/base/box_sort_nnps.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/box_sort_nnps.cpp:672: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/box_sort_nnps.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_13box_sort_nnps_15DictBoxSortNNPS_get_nearest_particles_no_cache(__pyx_obj_5pysph_4base_13box_sort_nnps_DictBoxSortNNPS*, int, int, size_t, __pyx_obj_7cyarray_6carray_UIntArray*, int, int)’: pysph/base/box_sort_nnps.cpp:5843:43: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 5843 | for (__pyx_t_19 = 0; __pyx_t_19 < __pyx_t_18; __pyx_t_19+=1) { | ~~~~~~~~~~~^~~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/box_sort_nnps.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/box_sort_nnps.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.spatial_hash_nnps' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipysph/base -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/spatial_hash_nnps.cpp -o build/temp.linux-arm64-3.8/pysph/base/spatial_hash_nnps.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/spatial_hash_nnps.cpp:660: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/spatial_hash_nnps.cpp: In function ‘void __pyx_f_5pysph_4base_17spatial_hash_nnps_15SpatialHashNNPS_find_nearest_neighbors(__pyx_obj_5pysph_4base_17spatial_hash_nnps_SpatialHashNNPS*, size_t, __pyx_obj_7cyarray_6carray_UIntArray*)’: pysph/base/spatial_hash_nnps.cpp:4562:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 4562 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/spatial_hash_nnps.cpp:4627:35: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 4627 | for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_6; __pyx_v_j++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/spatial_hash_nnps.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_17spatial_hash_nnps_15SpatialHashNNPS__bin(__pyx_obj_5pysph_4base_17spatial_hash_nnps_SpatialHashNNPS*, int, __pyx_obj_7cyarray_6carray_UIntArray*, int)’: pysph/base/spatial_hash_nnps.cpp:5293:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 5293 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_6; __pyx_v_i++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/spatial_hash_nnps.cpp: In function ‘void __pyx_f_5pysph_4base_17spatial_hash_nnps_23ExtendedSpatialHashNNPS_find_nearest_neighbors(__pyx_obj_5pysph_4base_17spatial_hash_nnps_ExtendedSpatialHashNNPS*, size_t, __pyx_obj_7cyarray_6carray_UIntArray*)’: pysph/base/spatial_hash_nnps.cpp:7061:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 7061 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/spatial_hash_nnps.cpp:7126:35: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 7126 | for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_6; __pyx_v_j++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/spatial_hash_nnps.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_17spatial_hash_nnps_23ExtendedSpatialHashNNPS__bin(__pyx_obj_5pysph_4base_17spatial_hash_nnps_ExtendedSpatialHashNNPS*, int, __pyx_obj_7cyarray_6carray_UIntArray*, int)’: pysph/base/spatial_hash_nnps.cpp:8304:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 8304 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_6; __pyx_v_i++) { | ~~~~~~~~~~^~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/spatial_hash_nnps.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/spatial_hash_nnps.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.cell_indexing_nnps' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/cell_indexing_nnps.cpp -o build/temp.linux-arm64-3.8/pysph/base/cell_indexing_nnps.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/cell_indexing_nnps.cpp:670: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/cell_indexing_nnps.cpp: In function ‘void __pyx_f_5pysph_4base_18cell_indexing_nnps_16CellIndexingNNPS_find_nearest_neighbors(__pyx_obj_5pysph_4base_18cell_indexing_nnps_CellIndexingNNPS*, size_t, __pyx_obj_7cyarray_6carray_UIntArray*)’: pysph/base/cell_indexing_nnps.cpp:4668:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_5pysph_4base_18cell_indexing_nnps_u_int’ {aka ‘unsigned int’} [-Wsign-compare] 4668 | for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_7; __pyx_v_j++) { | ~~~~~~~~~~^~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/cell_indexing_nnps.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/cell_indexing_nnps.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.z_order_nnps' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipysph/base -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/z_order_nnps.cpp -o build/temp.linux-arm64-3.8/pysph/base/z_order_nnps.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/z_order_nnps.cpp:672: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/z_order_nnps.cpp: In function ‘void __pyx_f_5pysph_4base_12z_order_nnps_10ZOrderNNPS_find_nearest_neighbors(__pyx_obj_5pysph_4base_12z_order_nnps_ZOrderNNPS*, size_t, __pyx_obj_7cyarray_6carray_UIntArray*)’: pysph/base/z_order_nnps.cpp:4651:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 4651 | for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_7; __pyx_v_j++) { | ~~~~~~~~~~^~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/z_order_nnps.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/z_order_nnps.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.stratified_hash_nnps' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipysph/base -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/stratified_hash_nnps.cpp -o build/temp.linux-arm64-3.8/pysph/base/stratified_hash_nnps.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/stratified_hash_nnps.cpp:660: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/stratified_hash_nnps.cpp: In function ‘void __pyx_f_5pysph_4base_20stratified_hash_nnps_18StratifiedHashNNPS_find_nearest_neighbors(__pyx_obj_5pysph_4base_20stratified_hash_nnps_StratifiedHashNNPS*, size_t, __pyx_obj_7cyarray_6carray_UIntArray*)’: pysph/base/stratified_hash_nnps.cpp:5107:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 5107 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/stratified_hash_nnps.cpp:5198:35: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 5198 | for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_5; __pyx_v_j++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/stratified_hash_nnps.cpp:5263:37: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 5263 | for (__pyx_v_k = 0; __pyx_v_k < __pyx_t_7; __pyx_v_k++) { | ~~~~~~~~~~^~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/stratified_hash_nnps.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/stratified_hash_nnps.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.stratified_sfc_nnps' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipysph/base -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/stratified_sfc_nnps.cpp -o build/temp.linux-arm64-3.8/pysph/base/stratified_sfc_nnps.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/stratified_sfc_nnps.cpp:675: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/stratified_sfc_nnps.cpp: In function ‘void __pyx_f_5pysph_4base_19stratified_sfc_nnps_17StratifiedSFCNNPS_find_nearest_neighbors(__pyx_obj_5pysph_4base_19stratified_sfc_nnps_StratifiedSFCNNPS*, size_t, __pyx_obj_7cyarray_6carray_UIntArray*)’: pysph/base/stratified_sfc_nnps.cpp:5188:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 5188 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/stratified_sfc_nnps.cpp:5279:35: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 5279 | for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_5; __pyx_v_j++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/stratified_sfc_nnps.cpp:5356:37: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 5356 | for (__pyx_v_k = 0; __pyx_v_k < __pyx_t_9; __pyx_v_k++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/stratified_sfc_nnps.cpp: In function ‘int __pyx_f_5pysph_4base_19stratified_sfc_nnps_17StratifiedSFCNNPS_get_number_of_particles(__pyx_obj_5pysph_4base_19stratified_sfc_nnps_StratifiedSFCNNPS*, int, int, int)’: pysph/base/stratified_sfc_nnps.cpp:5674:85: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 5674 | __pyx_t_9 = ((((__pyx_v_current_keys[__pyx_v_i]) >> __pyx_v_self->max_num_bits) != __pyx_v_level) != 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/stratified_sfc_nnps.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/stratified_sfc_nnps.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.octree' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/octree.cpp -o build/temp.linux-arm64-3.8/pysph/base/octree.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/octree.cpp:653: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/octree.cpp: In function ‘int __pyx_f_5pysph_4base_6octree_6Octree__c_build_tree(__pyx_obj_5pysph_4base_6octree_Octree*, __pyx_obj_5pysph_4base_9nnps_base_NNPSParticleArrayWrapper*, std::vector*, double*, double, __pyx_t_5pysph_4base_6octree_cOctreeNode*, int)’: pysph/base/octree.cpp:6952:41: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 6952 | __pyx_t_3 = ((__pyx_v_indices->size() < __pyx_v_self->leaf_max_particles) != 0); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/octree.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_6octree_6Octree_get_leaf_cells(__pyx_obj_5pysph_4base_6octree_Octree*, int)’: pysph/base/octree.cpp:8640:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<__pyx_t_5pysph_4base_6octree_cOctreeNode*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8640 | for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_6; __pyx_t_7+=1) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/octree.cpp:8658:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<__pyx_t_5pysph_4base_6octree_cOctreeNode*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8658 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_5; __pyx_v_i++) { | ~~~~~~~~~~^~~~~~~~~~~ pysph/base/octree.cpp: In function ‘int __pyx_f_5pysph_4base_6octree_16CompressedOctree__c_build_tree(__pyx_obj_5pysph_4base_6octree_CompressedOctree*, __pyx_obj_5pysph_4base_9nnps_base_NNPSParticleArrayWrapper*, std::vector*, double*, double, __pyx_t_5pysph_4base_6octree_cOctreeNode*, int)’: pysph/base/octree.cpp:10081:41: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 10081 | __pyx_t_3 = ((__pyx_v_indices->size() < __pyx_v_self->__pyx_base.leaf_max_particles) != 0); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/octree.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/octree.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.octree_nnps' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/octree_nnps.cpp -o build/temp.linux-arm64-3.8/pysph/base/octree_nnps.o -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/octree_nnps.cpp:655: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/base/octree_nnps.cpp: In function ‘void __pyx_f_5pysph_4base_11octree_nnps_10OctreeNNPS__get_neighbors(__pyx_obj_5pysph_4base_11octree_nnps_OctreeNNPS*, double, double, double, double, double*, double*, double*, double*, __pyx_obj_7cyarray_6carray_UIntArray*, __pyx_t_5pysph_4base_6octree_cOctreeNode*)’: pysph/base/octree_nnps.cpp:4517:35: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5pysph_4base_11octree_nnps_u_int’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 4517 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { | ~~~~~~~~~~^~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/octree_nnps.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/octree_nnps.cpython-38-aarch64-linux-gnu.so -fopenmp building 'pysph.base.c_kernels' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/c_kernels.cpp -o build/temp.linux-arm64-3.8/pysph/base/c_kernels.o pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_11CubicSpline_dwdq(__pyx_obj_5pysph_4base_9c_kernels_CubicSpline*, double, double)’: pysph/base/c_kernels.cpp:3937:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 3937 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_11CubicSpline_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_CubicSpline*, double*, double, double)’: pysph/base/c_kernels.cpp:5029:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 5029 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_11CubicSpline_kernel(__pyx_obj_5pysph_4base_9c_kernels_CubicSpline*, double*, double, double)’: pysph/base/c_kernels.cpp:5516:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 5516 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_15WendlandQuintic_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuintic*, double, double)’: pysph/base/c_kernels.cpp:8266:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 8266 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_15WendlandQuintic_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuintic*, double*, double, double)’: pysph/base/c_kernels.cpp:9316:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9316 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_15WendlandQuintic_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuintic*, double*, double, double)’: pysph/base/c_kernels.cpp:9770:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9770 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_8Gaussian_dwdq(__pyx_obj_5pysph_4base_9c_kernels_Gaussian*, double, double)’: pysph/base/c_kernels.cpp:12510:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 12510 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_8Gaussian_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_Gaussian*, double*, double, double)’: pysph/base/c_kernels.cpp:13550:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 13550 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_8Gaussian_kernel(__pyx_obj_5pysph_4base_9c_kernels_Gaussian*, double*, double, double)’: pysph/base/c_kernels.cpp:13976:17: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 13976 | __pyx_v_val = (exp(((-__pyx_v_q) * __pyx_v_q)) * __pyx_v_fac); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13QuinticSpline_dwdq(__pyx_obj_5pysph_4base_9c_kernels_QuinticSpline*, double, double)’: pysph/base/c_kernels.cpp:16866:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 16866 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13QuinticSpline_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_QuinticSpline*, double*, double, double)’: pysph/base/c_kernels.cpp:18070:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 18070 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13QuinticSpline_kernel(__pyx_obj_5pysph_4base_9c_kernels_QuinticSpline*, double*, double, double)’: pysph/base/c_kernels.cpp:18633:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 18633 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13SuperGaussian_dwdq(__pyx_obj_5pysph_4base_9c_kernels_SuperGaussian*, double, double)’: pysph/base/c_kernels.cpp:21383:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 21383 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13SuperGaussian_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_SuperGaussian*, double*, double, double)’: pysph/base/c_kernels.cpp:22497:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 22497 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * __pyx_v_val); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13SuperGaussian_kernel(__pyx_obj_5pysph_4base_9c_kernels_SuperGaussian*, double*, double, double)’: pysph/base/c_kernels.cpp:22933:17: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 22933 | __pyx_v_val = ((exp((-__pyx_v_q2)) * ((1.0 + (__pyx_v_self->dim * 0.5)) - __pyx_v_q2)) * __pyx_v_fac); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC4_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4*, double, double)’: pysph/base/c_kernels.cpp:25701:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 25701 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC4_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4*, double*, double, double)’: pysph/base/c_kernels.cpp:26751:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 26751 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC4_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4*, double*, double, double)’: pysph/base/c_kernels.cpp:27205:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 27205 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC6_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6*, double, double)’: pysph/base/c_kernels.cpp:29955:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 29955 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC6_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6*, double*, double, double)’: pysph/base/c_kernels.cpp:31005:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 31005 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC6_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6*, double*, double, double)’: pysph/base/c_kernels.cpp:31459:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 31459 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC2_1D_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1D*, double, double)’: pysph/base/c_kernels.cpp:34209:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 34209 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC2_1D_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1D*, double*, double, double)’: pysph/base/c_kernels.cpp:35259:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 35259 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC2_1D_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1D*, double*, double, double)’: pysph/base/c_kernels.cpp:35713:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 35713 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC4_1D_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4_1D*, double, double)’: pysph/base/c_kernels.cpp:38463:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 38463 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC4_1D_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4_1D*, double*, double, double)’: pysph/base/c_kernels.cpp:39513:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 39513 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC4_1D_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4_1D*, double*, double, double)’: pysph/base/c_kernels.cpp:39967:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 39967 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC6_1D_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1D*, double, double)’: pysph/base/c_kernels.cpp:42717:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 42717 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC6_1D_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1D*, double*, double, double)’: pysph/base/c_kernels.cpp:43767:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 43767 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC6_1D_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1D*, double*, double, double)’: pysph/base/c_kernels.cpp:44221:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 44221 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC2_1D_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1D*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:34209:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 34209 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:34034:10: note: ‘__pyx_v_fac’ was declared here 34034 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_15WendlandQuintic_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuintic*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:8266:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 8266 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:8091:10: note: ‘__pyx_v_fac’ was declared here 8091 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_8Gaussian_gradient(__pyx_obj_5pysph_4base_9c_kernels_Gaussian*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:12510:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 12510 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:12345:10: note: ‘__pyx_v_fac’ was declared here 12345 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_11CubicSpline_gradient(__pyx_obj_5pysph_4base_9c_kernels_CubicSpline*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:3937:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 3937 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:3716:10: note: ‘__pyx_v_fac’ was declared here 3716 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC4_1D_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4_1D*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:38463:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 38463 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:38288:10: note: ‘__pyx_v_fac’ was declared here 38288 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_13SuperGaussian_gradient(__pyx_obj_5pysph_4base_9c_kernels_SuperGaussian*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:21383:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 21383 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:21208:10: note: ‘__pyx_v_fac’ was declared here 21208 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC4_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:25701:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 25701 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:25526:10: note: ‘__pyx_v_fac’ was declared here 25526 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC6_1D_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1D*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:42717:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 42717 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:42542:10: note: ‘__pyx_v_fac’ was declared here 42542 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC6_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:29955:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 29955 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:29780:10: note: ‘__pyx_v_fac’ was declared here 29780 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘void __pyx_f_5pysph_4base_9c_kernels_13QuinticSpline_gradient(__pyx_obj_5pysph_4base_9c_kernels_QuinticSpline*, double*, double, double, double*)’: pysph/base/c_kernels.cpp:16866:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 16866 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:16569:10: note: ‘__pyx_v_fac’ was declared here 16569 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13SuperGaussian_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_SuperGaussian*, double, double, int)’: pysph/base/c_kernels.cpp:21383:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 21383 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:21208:10: note: ‘__pyx_v_fac’ was declared here 21208 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC6_1D_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1D*, double, double, int)’: pysph/base/c_kernels.cpp:42717:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 42717 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:42542:10: note: ‘__pyx_v_fac’ was declared here 42542 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC6_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6*, double, double, int)’: pysph/base/c_kernels.cpp:29955:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 29955 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:29780:10: note: ‘__pyx_v_fac’ was declared here 29780 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13QuinticSpline_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_QuinticSpline*, double, double, int)’: pysph/base/c_kernels.cpp:16866:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 16866 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:16569:10: note: ‘__pyx_v_fac’ was declared here 16569 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC2_1D_py_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1D*, __Pyx_memviewslice, double, double, __Pyx_memviewslice, int)’: pysph/base/c_kernels.cpp:34209:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 34209 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:34034:10: note: ‘__pyx_v_fac’ was declared here 34034 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_15WendlandQuintic_py_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuintic*, __Pyx_memviewslice, double, double, __Pyx_memviewslice, int)’: pysph/base/c_kernels.cpp:8266:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 8266 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:8091:10: note: ‘__pyx_v_fac’ was declared here 8091 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC6_1D_py_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1D*, __Pyx_memviewslice, double, double, __Pyx_memviewslice, int)’: pysph/base/c_kernels.cpp:42717:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 42717 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:42542:10: note: ‘__pyx_v_fac’ was declared here 42542 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC6_py_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6*, __Pyx_memviewslice, double, double, __Pyx_memviewslice, int)’: pysph/base/c_kernels.cpp:29955:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 29955 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:29780:10: note: ‘__pyx_v_fac’ was declared here 29780 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_13QuinticSpline_py_gradient(__pyx_obj_5pysph_4base_9c_kernels_QuinticSpline*, __Pyx_memviewslice, double, double, __Pyx_memviewslice, int)’: pysph/base/c_kernels.cpp:16866:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 16866 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:16569:10: note: ‘__pyx_v_fac’ was declared here 16569 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_8Gaussian_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_Gaussian*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:13976:17: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 13976 | __pyx_v_val = (exp(((-__pyx_v_q) * __pyx_v_q)) * __pyx_v_fac); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:13848:10: note: ‘__pyx_v_fac’ was declared here 13848 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_27WendlandQuinticC2_1DWrapper_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1DWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:34209:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 34209 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:34034:10: note: ‘__pyx_v_fac’ was declared here 34034 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_22WendlandQuinticWrapper_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:8266:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 8266 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:8091:10: note: ‘__pyx_v_fac’ was declared here 8091 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC2_1D_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1D*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:35713:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 35713 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:35557:10: note: ‘__pyx_v_fac’ was declared here 35557 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_15WendlandQuintic_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuintic*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:9770:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9770 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:9614:10: note: ‘__pyx_v_fac’ was declared here 9614 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13SuperGaussian_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_SuperGaussian*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:22933:17: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 22933 | __pyx_v_val = ((exp((-__pyx_v_q2)) * ((1.0 + (__pyx_v_self->dim * 0.5)) - __pyx_v_q2)) * __pyx_v_fac); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:22795:10: note: ‘__pyx_v_fac’ was declared here 22795 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_11CubicSpline_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_CubicSpline*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:5516:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 5516 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:5327:10: note: ‘__pyx_v_fac’ was declared here 5327 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC4_1D_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4_1D*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:39967:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 39967 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:39811:10: note: ‘__pyx_v_fac’ was declared here 39811 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_8Gaussian_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_Gaussian*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:13550:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 13550 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:13386:10: note: ‘__pyx_v_fac’ was declared here 13386 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC4_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:27205:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 27205 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:27049:10: note: ‘__pyx_v_fac’ was declared here 27049 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_27WendlandQuinticC6_1DWrapper_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1DWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:42717:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 42717 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:42542:10: note: ‘__pyx_v_fac’ was declared here 42542 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_24WendlandQuinticC6Wrapper_gradient(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6Wrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:29955:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 29955 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:29780:10: note: ‘__pyx_v_fac’ was declared here 29780 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_15GaussianWrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_GaussianWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:13976:17: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 13976 | __pyx_v_val = (exp(((-__pyx_v_q) * __pyx_v_q)) * __pyx_v_fac); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:13848:10: note: ‘__pyx_v_fac’ was declared here 13848 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC2_1D_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1D*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:35259:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 35259 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:35085:10: note: ‘__pyx_v_fac’ was declared here 35085 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_27WendlandQuinticC2_1DWrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1DWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:35713:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 35713 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:35557:10: note: ‘__pyx_v_fac’ was declared here 35557 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_22WendlandQuinticWrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:9770:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9770 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:9614:10: note: ‘__pyx_v_fac’ was declared here 9614 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC6_1D_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1D*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:44221:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 44221 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:44065:10: note: ‘__pyx_v_fac’ was declared here 44065 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_15WendlandQuintic_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuintic*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:9316:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9316 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:9142:10: note: ‘__pyx_v_fac’ was declared here 9142 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC6_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:31459:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 31459 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:31303:10: note: ‘__pyx_v_fac’ was declared here 31303 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13SuperGaussian_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_SuperGaussian*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:22497:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 22497 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * __pyx_v_val); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:22311:10: note: ‘__pyx_v_fac’ was declared here 22311 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20SuperGaussianWrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_SuperGaussianWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:22933:17: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 22933 | __pyx_v_val = ((exp((-__pyx_v_q2)) * ((1.0 + (__pyx_v_self->dim * 0.5)) - __pyx_v_q2)) * __pyx_v_fac); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:22795:10: note: ‘__pyx_v_fac’ was declared here 22795 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_18CubicSplineWrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_CubicSplineWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:5516:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 5516 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:5327:10: note: ‘__pyx_v_fac’ was declared here 5327 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_27WendlandQuinticC4_1DWrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4_1DWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:39967:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 39967 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:39811:10: note: ‘__pyx_v_fac’ was declared here 39811 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_24WendlandQuinticC4Wrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4Wrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:27205:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 27205 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:27049:10: note: ‘__pyx_v_fac’ was declared here 27049 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_11CubicSpline_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_CubicSpline*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:5029:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 5029 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:4813:10: note: ‘__pyx_v_fac’ was declared here 4813 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC4_1D_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4_1D*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:39513:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 39513 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:39339:10: note: ‘__pyx_v_fac’ was declared here 39339 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_27WendlandQuinticC6_1DWrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1DWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:44221:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 44221 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:44065:10: note: ‘__pyx_v_fac’ was declared here 44065 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_24WendlandQuinticC6Wrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6Wrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:31459:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 31459 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:31303:10: note: ‘__pyx_v_fac’ was declared here 31303 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC4_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:26751:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 26751 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:26577:10: note: ‘__pyx_v_fac’ was declared here 26577 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘PyObject* __pyx_f_5pysph_4base_9c_kernels_20QuinticSplineWrapper_gradient(__pyx_obj_5pysph_4base_9c_kernels_QuinticSplineWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:16866:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 16866 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:16569:10: note: ‘__pyx_v_fac’ was declared here 16569 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC6_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:31005:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 31005 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:30831:10: note: ‘__pyx_v_fac’ was declared here 30831 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC6_1D_py_gradient_h(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC6_1D*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:43767:16: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 43767 | __pyx_r = (((-__pyx_v_fac) * __pyx_v_h1) * ((__pyx_v_dw * __pyx_v_q) + (__pyx_v_w * __pyx_v_self->dim))); | ~^~~~~~~~~~~~~ pysph/base/c_kernels.cpp:43593:10: note: ‘__pyx_v_fac’ was declared here 43593 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_13QuinticSpline_py_kernel(__pyx_obj_5pysph_4base_9c_kernels_QuinticSpline*, __Pyx_memviewslice, double, double, int)’: pysph/base/c_kernels.cpp:18633:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 18633 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:18368:10: note: ‘__pyx_v_fac’ was declared here 18368 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20QuinticSplineWrapper_kernel(__pyx_obj_5pysph_4base_9c_kernels_QuinticSplineWrapper*, double, double, double, double, double, double, double, int)’: pysph/base/c_kernels.cpp:18633:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 18633 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:18368:10: note: ‘__pyx_v_fac’ was declared here 18368 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC2_1D_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC2_1D*, double, double, int)’: pysph/base/c_kernels.cpp:34209:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 34209 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:34034:10: note: ‘__pyx_v_fac’ was declared here 34034 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_15WendlandQuintic_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuintic*, double, double, int)’: pysph/base/c_kernels.cpp:8266:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 8266 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:8091:10: note: ‘__pyx_v_fac’ was declared here 8091 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_8Gaussian_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_Gaussian*, double, double, int)’: pysph/base/c_kernels.cpp:12510:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 12510 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:12345:10: note: ‘__pyx_v_fac’ was declared here 12345 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_11CubicSpline_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_CubicSpline*, double, double, int)’: pysph/base/c_kernels.cpp:3937:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 3937 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:3716:10: note: ‘__pyx_v_fac’ was declared here 3716 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_20WendlandQuinticC4_1D_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4_1D*, double, double, int)’: pysph/base/c_kernels.cpp:38463:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 38463 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:38288:10: note: ‘__pyx_v_fac’ was declared here 38288 | double __pyx_v_fac; | ^~~~~~~~~~~ pysph/base/c_kernels.cpp: In function ‘double __pyx_f_5pysph_4base_9c_kernels_17WendlandQuinticC4_py_dwdq(__pyx_obj_5pysph_4base_9c_kernels_WendlandQuinticC4*, double, double, int)’: pysph/base/c_kernels.cpp:25701:11: warning: ‘__pyx_v_fac’ may be used uninitialized in this function [-Wmaybe-uninitialized] 25701 | __pyx_r = (__pyx_v_val * __pyx_v_fac); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pysph/base/c_kernels.cpp:25526:10: note: ‘__pyx_v_fac’ was declared here 25526 | double __pyx_v_fac; | ^~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/c_kernels.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/c_kernels.cpython-38-aarch64-linux-gnu.so building 'pysph.base.linalg3' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/base/linalg3.cpp -o build/temp.linux-arm64-3.8/pysph/base/linalg3.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/base/linalg3.cpp:646: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/base/linalg3.o -o /<>/.pybuild/cpython3_3.8/build/pysph/base/linalg3.cpython-38-aarch64-linux-gnu.so building 'pysph.tools.geometry_stl' extension creating build/temp.linux-arm64-3.8/pysph/tools aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/include/python3.8 -c pysph/tools/geometry_stl.cpp -o build/temp.linux-arm64-3.8/pysph/tools/geometry_stl.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/tools/geometry_stl.cpp:645: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/tools/geometry_stl.o -o /<>/.pybuild/cpython3_3.8/build/pysph/tools/geometry_stl.cpython-38-aarch64-linux-gnu.so building 'pysph.parallel.parallel_manager' extension creating build/temp.linux-arm64-3.8/pysph/parallel aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/local/include/ -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/trilinos -I/usr/lib/python3/dist-packages/pyzoltan/czoltan -I/usr/include/python3.8 -c pysph/parallel/parallel_manager.cpp -o build/temp.linux-arm64-3.8/pysph/parallel/parallel_manager.o -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -pthread In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from pysph/parallel/parallel_manager.cpp:675: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pysph/parallel/parallel_manager.cpp: In function ‘PyObject* __pyx_f_5pysph_8parallel_16parallel_manager_15ParallelManager_get_nearest_particles(__pyx_obj_5pysph_8parallel_16parallel_manager_ParallelManager*, int, int, size_t, __pyx_obj_7cyarray_6carray_UIntArray*, int)’: pysph/parallel/parallel_manager.cpp:17901:43: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 17901 | for (__pyx_t_18 = 0; __pyx_t_18 < __pyx_t_17; __pyx_t_18+=1) { | ~~~~~~~~~~~^~~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/pysph/parallel/parallel_manager.o -ltrilinos_zoltan -lmpi -o /<>/.pybuild/cpython3_3.8/build/pysph/parallel/parallel_manager.cpython-38-aarch64-linux-gnu.so -pthread -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi env PYTHONPATH=/<>/.pybuild/cpython3_3.8/build \ python3 -m sphinx -M html /<>/docs/source /<>/docs/build -N Running Sphinx v3.2.1 making output directory... done WARNING: html_static_path entry '_static' does not exist loading intersphinx inventory from https://cyarray.readthedocs.io/en/latest/objects.inv... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://cyarray.readthedocs.io/en/latest/objects.inv' not fetchable due to : HTTPSConnectionPool(host='cyarray.readthedocs.io', port=443): Max retries exceeded with url: /en/latest/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) building [mo]: targets for 0 po files that are out of date building [html]: targets for 28 source files that are out of date updating environment: [new config] 28 added, 0 changed, 0 removed reading sources... [ 3%] contribution/how_to_write_docs reading sources... [ 7%] design/equations reading sources... [ 10%] design/overview reading sources... [ 14%] design/solver_interfaces reading sources... [ 17%] design/working_with_particles reading sources... [ 21%] examples/index reading sources... [ 25%] examples/sphere_in_vessel reading sources... [ 28%] examples/taylor_green reading sources... [ 32%] index reading sources... [ 35%] installation reading sources... [ 39%] overview reading sources... [ 42%] reference/application reading sources... [ 46%] reference/controller reading sources... [ 50%] reference/equations reading sources... [ 53%] reference/index reading sources... [ 57%] reference/integrator reading sources... [ 60%] reference/kernels reading sources... [ 64%] reference/nnps reading sources... [ 67%] reference/parallel_manager reading sources... [ 71%] reference/particle_array reading sources... [ 75%] reference/scheme reading sources... [ 78%] reference/solver reading sources... [ 82%] reference/solver_interfaces reading sources... [ 85%] reference/tools reading sources... [ 89%] starcluster/overview reading sources... [ 92%] tutorial/circular_patch reading sources... [ 96%] tutorial/circular_patch_simple reading sources... [100%] using_pysph /<>/docs/source/installation.rst:423: WARNING: Duplicate explicit target name: "miniconda". /<>/docs/source/installation.rst:778: WARNING: Title level inconsistent: Issues with the pip cache -------------------------- /<>/docs/source/installation.rst:7: WARNING: Duplicate target name, cannot be used as a unique reference: "miniconda". /<>/docs/source/installation.rst:295: WARNING: Unknown target name: "conda". /<>/docs/source/installation.rst:407: WARNING: Duplicate target name, cannot be used as a unique reference: "miniconda". WARNING: autodoc: failed to import module 'application' from module 'pysph.solver'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'controller' from module 'pysph.solver'; the following exception was raised: No module named 'pysph.base.particle_array' /<>/pysph/sph/basic_equations.py:docstring of pysph.sph.basic_equations.XSPHCorrectionForLeapFrog:13: WARNING: Duplicate explicit target name: "monaghan1992". /<>/pysph/sph/wc/basic.py:docstring of pysph.sph.wc.basic.MomentumEquation:32: WARNING: Duplicate explicit target name: "monaghan1992". /<>/pysph/sph/wc/basic.py:docstring of pysph.sph.wc.basic.MomentumEquationDeltaSPH:18: WARNING: Duplicate explicit target name: "marrone2011". /<>/pysph/sph/wc/basic.py:docstring of pysph.sph.wc.basic.TaitEOS:14: WARNING: Duplicate explicit target name: "monaghan2005". /<>/pysph/sph/wc/viscosity.py:docstring of pysph.sph.wc.viscosity.LaminarViscosityDeltaSPH:4: WARNING: Bullet list ends without a blank line; unexpected unindent. WARNING: autodoc: failed to import module 'gtvf' from module 'pysph.sph.wc'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'crksph' from module 'pysph.sph.wc'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'pcisph' from module 'pysph.sph.wc'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'basic' from module 'pysph.sph.solid_mech'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'basic' from module 'pysph.sph.gas_dynamics'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'surface_tension' from module 'pysph.sph'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'iisph' from module 'pysph.sph'; the following exception was raised: No module named 'pysph.base.particle_array' /<>/pysph/sph/basic_equations.py:docstring of pysph.sph.basic_equations.XSPHCorrectionForLeapFrog:13: WARNING: duplicate citation Monaghan1992, other instance in /<>/docs/source/reference/equations.rst /<>/pysph/sph/wc/basic.py:docstring of pysph.sph.wc.basic.MomentumEquation:32: WARNING: duplicate citation Monaghan1992, other instance in /<>/docs/source/reference/equations.rst /<>/pysph/sph/wc/basic.py:docstring of pysph.sph.wc.basic.MomentumEquationDeltaSPH:18: WARNING: duplicate citation Marrone2011, other instance in /<>/docs/source/reference/equations.rst /<>/pysph/sph/wc/basic.py:docstring of pysph.sph.wc.basic.TaitEOS:14: WARNING: duplicate citation Monaghan2005, other instance in /<>/docs/source/reference/equations.rst /<>/pysph/sph/integrator.py:docstring of pysph.sph.integrator.EPECIntegrator:26: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/pysph/base/kernels.py:docstring of pysph.base.kernels.CubicSpline:21: WARNING: duplicate citation Monaghan1992, other instance in /<>/docs/source/reference/equations.rst WARNING: autodoc: failed to import module 'nnps' from module 'pysph.base'; the following exception was raised: No module named 'pysph.base.nnps_base' WARNING: autodoc: failed to import module 'nnps_base' from module 'pysph.base'; the following exception was raised: No module named 'pysph.base.nnps_base' WARNING: autodoc: failed to import module 'linked_list_nnps' from module 'pysph.base'; the following exception was raised: No module named 'pysph.base.linked_list_nnps' WARNING: autodoc: failed to import module 'box_sort_nnps' from module 'pysph.base'; the following exception was raised: No module named 'pysph.base.box_sort_nnps' WARNING: autodoc: failed to import module 'spatial_hash_nnps' from module 'pysph.base'; the following exception was raised: No module named 'pysph.base.spatial_hash_nnps' WARNING: autodoc: failed to import module 'parallel_manager' from module 'pysph.parallel'; the following exception was raised: No module named 'pysph.parallel.parallel_manager' WARNING: autodoc: failed to import module 'particle_array' from module 'pysph.base'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'utils' from module 'pysph.base'; the following exception was raised: No module named 'pysph.base.particle_array' /<>/pysph/sph/scheme.py:docstring of pysph.sph.scheme.WCSPHScheme:44: WARNING: duplicate citation Hughes2010, other instance in /<>/docs/source/reference/equations.rst /<>/pysph/sph/scheme.py:docstring of pysph.sph.scheme.WCSPHScheme:48: WARNING: duplicate citation Marrone2011, other instance in /<>/docs/source/reference/equations.rst /<>/pysph/sph/scheme.py:docstring of pysph.sph.scheme.WCSPHScheme:52: WARNING: duplicate citation Cherfils2012, other instance in /<>/docs/source/reference/equations.rst WARNING: autodoc: failed to import module 'solver' from module 'pysph.solver'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'inlet_outlet_manager' from module 'pysph.sph.bc'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import function 'utils.dump' from module 'pysph.solver'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import function 'utils.get_files' from module 'pysph.solver'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import function 'utils.load' from module 'pysph.solver'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import function 'utils.load_and_concatenate' from module 'pysph.solver'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'interpolator' from module 'pysph.tools'; the following exception was raised: No module named 'pysph.base.particle_array' WARNING: autodoc: failed to import module 'sph_evaluator' from module 'pysph.tools'; the following exception was raised: No module named 'pysph.base.nnps_base' WARNING: autodoc: failed to import module 'mayavi_viewer' from module 'pysph.tools'; the following exception was raised: No module named 'traitsui' WARNING: autodoc: failed to import function 'geometry_stl.get_stl_surface' from module 'pysph.tools'; the following exception was raised: No module named 'pysph.tools.geometry_stl' looking for now-outdated files... none found pickling environment... done checking consistency... /<>/docs/source/design/working_with_particles.rst: WARNING: document isn't included in any toctree /<>/docs/source/reference/scheme.rst:48: WARNING: Citation [Marrone2011] is not referenced. /<>/docs/source/reference/scheme.rst:52: WARNING: Citation [Cherfils2012] is not referenced. /<>/docs/source/reference/equations.rst:8: WARNING: Citation [Cole1948] is not referenced. /<>/docs/source/reference/equations.rst:11: WARNING: Citation [Batchelor2002] is not referenced. /<>/docs/source/reference/scheme.rst:44: WARNING: Citation [Hughes2010] is not referenced. /<>/docs/source/reference/equations.rst:7: WARNING: Citation [Ferrari2009] is not referenced. /<>/docs/source/reference/equations.rst:10: WARNING: Citation [Adami2013] is not referenced. /<>/docs/source/reference/equations.rst:9: WARNING: Citation [BonetLok1999] is not referenced. done preparing documents... done writing output... [ 3%] contribution/how_to_write_docs writing output... [ 7%] design/equations writing output... [ 10%] design/overview writing output... [ 14%] design/solver_interfaces writing output... [ 17%] design/working_with_particles writing output... [ 21%] examples/index writing output... [ 25%] examples/sphere_in_vessel writing output... [ 28%] examples/taylor_green writing output... [ 32%] index writing output... [ 35%] installation writing output... [ 39%] overview writing output... [ 42%] reference/application writing output... [ 46%] reference/controller writing output... [ 50%] reference/equations writing output... [ 53%] reference/index writing output... [ 57%] reference/integrator writing output... [ 60%] reference/kernels writing output... [ 64%] reference/nnps writing output... [ 67%] reference/parallel_manager writing output... [ 71%] reference/particle_array writing output... [ 75%] reference/scheme writing output... [ 78%] reference/solver writing output... [ 82%] reference/solver_interfaces writing output... [ 85%] reference/tools writing output... [ 89%] starcluster/overview writing output... [ 92%] tutorial/circular_patch writing output... [ 96%] tutorial/circular_patch_simple writing output... [100%] using_pysph /<>/docs/source/installation.rst:65: WARNING: undefined label: pip-cache-issues (if the link has no caption the label must precede a section header) /<>/docs/source/installation.rst:187: WARNING: undefined label: pip-cache-issues (if the link has no caption the label must precede a section header) /<>/docs/source/installation.rst:315: WARNING: undefined label: pip-cache-issues (if the link has no caption the label must precede a section header) generating indices... genindex py-modindexdone highlighting module code... [ 5%] pysph.base.kernels highlighting module code... [ 10%] pysph.base.reduce_array highlighting module code... [ 15%] pysph.solver.solver_interfaces highlighting module code... [ 21%] pysph.solver.tools highlighting module code... [ 26%] pysph.sph.basic_equations highlighting module code... [ 31%] pysph.sph.boundary_equations highlighting module code... [ 36%] pysph.sph.equation highlighting module code... [ 42%] pysph.sph.integrator highlighting module code... [ 47%] pysph.sph.integrator_step highlighting module code... [ 52%] pysph.sph.misc.advection highlighting module code... [ 57%] pysph.sph.rigid_body highlighting module code... [ 63%] pysph.sph.scheme highlighting module code... [ 68%] pysph.sph.solid_mech.hvi highlighting module code... [ 73%] pysph.sph.wc.basic highlighting module code... [ 78%] pysph.sph.wc.density_correction highlighting module code... [ 84%] pysph.sph.wc.kernel_correction highlighting module code... [ 89%] pysph.sph.wc.transport_velocity highlighting module code... [ 94%] pysph.sph.wc.viscosity highlighting module code... [100%] pysph.tools.gmsh writing additional pages... searchdone copying images... [ 8%] design/../../Images/dam-break-schematic.png copying images... [ 16%] design/images/controller.png copying images... [ 25%] design/images/html_client.png copying images... [ 33%] design/images/particle-array.png copying images... [ 41%] ../Images/pysph_viewer.png copying images... [ 50%] ../Images/ldc-streamlines.png copying images... [ 58%] ../Images/rings-collision.png copying images... [ 66%] ../Images/db3d.png copying images... [ 75%] tutorial/../../Images/pysph-examples-common-steps.png copying images... [ 83%] tutorial/../../Images/pysph_viewer.png copying images... [ 91%] ../Images/local-remote-particles.png copying images... [100%] ../Images/periodic-domain-ghost-particle-tags.png copying static files... ... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 60 warnings. The HTML pages are in docs/build/html. find /<>/docs/build/html -type f -print0 | xargs --no-run-if-empty -0 sed -i 's/https:\/\/www.youtube.com//g' make[1]: Leaving directory '/<>' dh_auto_test -a -O--buildsystem=pybuild I: pybuild base:217: cd '/<>/.pybuild/cpython3_3.8/build'; python3.8 -m pytest -k 'not test_sph_evaluator and not TestInterpolator' ============================= test session starts ============================== platform linux -- Python 3.8.6, pytest-4.6.11, py-1.9.0, pluggy-0.13.0 rootdir: /<>, inifile: tox.ini collected 889 items / 90 deselected / 799 selected pysph/base/tests/test_device_helper.py .ss.ss.ss.ss.ss.ss.ss.ss.ss.ss.ss [ 4%] .ss.ss.ss.ss.ss.ss.sss [ 6%] pysph/base/tests/test_domain_manager.py sss......... [ 8%] pysph/base/tests/test_kernel.py ........................................ [ 13%] ................................................................. [ 21%] pysph/base/tests/test_linalg3.py ....... [ 22%] pysph/base/tests/test_neighbor_cache.py .... [ 22%] pysph/base/tests/test_nnps.py .......ssssssssss......................... [ 28%] ...Segmentation fault (core dumped) E: pybuild pybuild:352: test: plugin distutils failed with: exit code=139: cd '/<>/.pybuild/cpython3_3.8/build'; python3.8 -m pytest -k 'not test_sph_evaluator and not TestInterpolator' dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.8 returned exit code 13 make: *** [debian/rules:11: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2020-10-01T03:36:51Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: n/a Build-Time: 878 Distribution: groovy Fail-Stage: build Host Architecture: arm64 Install-Time: 146 Job: pysph_1.0~b0~20191115.gite3d5e10-2.dsc Machine Architecture: arm64 Package: pysph Package-Time: 1029 Source-Version: 1.0~b0~20191115.gite3d5e10-2 Space: n/a Status: attempted Version: 1.0~b0~20191115.gite3d5e10-2 -------------------------------------------------------------------------------- Finished at 2020-10-01T03:36:51Z Build needed 00:17:09, no disk space E: Build failure (dpkg-buildpackage died) RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-20043443 Scanning for processes to kill in build PACKAGEBUILD-20043443