https://launchpad.net/ubuntu/+archive/test-rebuild-20201216-hirsute-gcc11/+build/20662121 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-069 4.15.0-134-generic #138-Ubuntu SMP Fri Jan 15 10:57:23 UTC 2021 aarch64 Buildd toolchain package versions: launchpad-buildd_194~476~ubuntu18.04.1 python3-lpbuildd_194~476~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 26 Jan 22:26:19 ntpdate[1622]: adjust time server 10.211.37.1 offset -0.000835 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20662121 --image-type chroot /home/buildd/filecache-default/6663ab897c1b9684e4da3138ea2f806b3d40e7b1 Creating target for build PACKAGEBUILD-20662121 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20662121 Starting target for build PACKAGEBUILD-20662121 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20662121 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu hirsute main' 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute main' 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu hirsute main' 'deb http://ftpmaster.internal/ubuntu hirsute main universe' Overriding sources.list in build-PACKAGEBUILD-20662121 RUN: /usr/share/launchpad-buildd/bin/in-target add-trusted-keys --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20662121 Adding trusted keys to build-PACKAGEBUILD-20662121 Warning: apt-key is deprecated. Manage keyring files in trusted.gpg.d instead (see apt-key(8)). OK Warning: apt-key is deprecated. Manage keyring files in trusted.gpg.d instead (see apt-key(8)). /etc/apt/trusted.gpg -------------------- pub rsa1024 2009-10-22 [SC] 60C3 1780 3A41 BA51 845E 371A 1E93 77A2 BA9E F27F uid [ unknown] Launchpad Toolchain builds /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-cdimage.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 8439 38DF 228D 22F7 B374 2BC0 D94A A3F0 EFE2 1092 uid [ unknown] Ubuntu CD Image Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2018-archive.gpg ------------------------------------------------------ pub rsa4096 2018-09-17 [SC] F6EC B376 2474 EDA9 D21B 7022 8719 20D1 991B C93C uid [ unknown] Ubuntu Archive Automatic Signing Key (2018) RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20662121 Updating target for build PACKAGEBUILD-20662121 Get:1 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu hirsute InRelease [23.8 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute InRelease [269 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute InRelease [17.6 kB] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu hirsute InRelease [17.6 kB] Get:5 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu hirsute/main armhf Packages [15.1 kB] Get:6 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu hirsute/main Translation-en [10.0 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/main armhf Packages [1349 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [513 kB] Get:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf Packages [11.7 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/universe armhf Packages [12.6 MB] Get:11 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main Translation-en [6856 B] Get:12 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu hirsute/main armhf Packages [14.9 kB] Get:13 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu hirsute/main Translation-en [11.0 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5422 kB] Fetched 20.2 MB in 7s (2713 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: gcc-11-base libisl23 libperl5.32 libxxhash0 perl-modules-5.32 The following packages have been kept back: cpp g++ gcc The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-arm-linux-gnueabihf binutils-common bsdutils coreutils cpp-10 dash dpkg dpkg-dev fakeroot g++-10 gcc-10 gcc-10-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libacl1 libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libgcc-10-dev libgcc-s1 libgcrypt20 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgssapi-krb5-2 libidn2-0 libip4tc2 libk5crypto3 libkrb5-3 libkrb5support0 liblz4-1 libmount1 libmpc3 libncurses6 libncursesw6 libnpth0 libp11-kit0 libpcre2-8-0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libssl1.1 libstdc++-10-dev libstdc++6 libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login mount ncurses-base ncurses-bin openssl passwd patch perl perl-base readline-common sensible-utils systemd systemd-sysv systemd-timesyncd sysvinit-utils tar tzdata util-linux 111 upgraded, 5 newly installed, 0 to remove and 3 not upgraded. Need to get 72.4 MB of archives. After this operation, 44.2 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute/main armhf libcrypt-dev armhf 1:4.4.17-1ubuntu1 [113 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf gcc-11-base armhf 11-20210123-1ubuntu1 [19.0 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf libgcc-s1 armhf 11-20210123-1ubuntu1 [36.3 kB] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf libstdc++6 armhf 11-20210123-1ubuntu1 [499 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main armhf libc6-dev armhf 2.32-0ubuntu6 [1582 kB] Get:6 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf libgomp1 armhf 11-20210123-1ubuntu1 [91.0 kB] Get:7 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf libatomic1 armhf 11-20210123-1ubuntu1 [7232 B] Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf libasan6 armhf 11-20210123-1ubuntu1 [2004 kB] Get:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf libubsan1 armhf 11-20210123-1ubuntu1 [807 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main armhf libc-dev-bin armhf 2.32-0ubuntu6 [29.6 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main armhf libcrypt1 armhf 1:4.4.17-1ubuntu1 [86.7 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main armhf linux-libc-dev armhf 5.8.0-36.40+21.04.1 [1108 kB] Get:13 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu hirsute/main armhf libcc1-0 armhf 11-20210123-1ubuntu1 [41.2 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main armhf libtirpc-common all 1.3.1-1 [7452 B] Get:15 http://ftpmaster.internal/ubuntu hirsute/main armhf libk5crypto3 armhf 1.18.3-4 [74.1 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main armhf libgssapi-krb5-2 armhf 1.18.3-4 [107 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main armhf libkrb5-3 armhf 1.18.3-4 [282 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main armhf libkrb5support0 armhf 1.18.3-4 [27.9 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main armhf libssl1.1 armhf 1.1.1f-1ubuntu5 [1079 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main armhf libtirpc-dev armhf 1.3.1-1 [174 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main armhf libtirpc3 armhf 1.3.1-1 [65.6 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute/main armhf libc6 armhf 2.32-0ubuntu6 [2124 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main armhf base-files armhf 11ubuntu16 [60.2 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main armhf bash armhf 5.1-1ubuntu1 [606 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main armhf bsdutils armhf 1:2.36.1-1ubuntu2 [78.6 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main armhf coreutils armhf 8.32-4ubuntu2 [1207 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute/main armhf tar armhf 1.32+dfsg-1 [249 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main armhf dpkg armhf 1.20.7.1ubuntu1 [1212 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main armhf dash armhf 0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1 [78.9 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main armhf grep armhf 3.6-1 [143 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main armhf gzip armhf 1.10-2ubuntu2 [91.4 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main armhf login armhf 1:4.8.1-1ubuntu8 [217 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main armhf libncurses6 armhf 6.2+20201114-2 [79.9 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main armhf libncursesw6 armhf 6.2+20201114-2 [106 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main armhf libtinfo6 armhf 6.2+20201114-2 [74.0 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main armhf ncurses-bin armhf 6.2+20201114-2 [165 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main armhf perl-modules-5.32 all 5.32.0-6 [2754 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main armhf libperl5.32 armhf 5.32.0-6 [3357 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main armhf perl armhf 5.32.0-6 [225 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main armhf perl-base armhf 5.32.0-6 [1423 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute/main armhf libgdbm6 armhf 1.19-2 [24.6 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main armhf libgdbm-compat4 armhf 1.19-2 [5896 B] Get:43 http://ftpmaster.internal/ubuntu hirsute/main armhf util-linux armhf 2.36.1-1ubuntu2 [1005 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main armhf libdebconfclient0 armhf 0.256ubuntu1 [5712 B] Get:45 http://ftpmaster.internal/ubuntu hirsute/main armhf base-passwd armhf 3.5.48 [46.0 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main armhf init-system-helpers all 1.59 [38.2 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main armhf libc-bin armhf 2.32-0ubuntu6 [505 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main armhf ncurses-base all 6.2+20201114-2 [18.4 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main armhf sysvinit-utils armhf 2.96-5ubuntu1 [19.2 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main armhf libxxhash0 armhf 0.8.0-2 [21.8 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main armhf libgcrypt20 armhf 1.8.7-2ubuntu1 [364 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main armhf liblz4-1 armhf 1.9.3-0ubuntu1 [49.4 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main armhf systemd-sysv armhf 247.1-4ubuntu1 [10.3 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main armhf libaudit-common all 1:2.8.5-3ubuntu3 [4048 B] Get:55 http://ftpmaster.internal/ubuntu hirsute/main armhf libcap-ng0 armhf 0.7.9-2.2build1 [9672 B] Get:56 http://ftpmaster.internal/ubuntu hirsute/main armhf libaudit1 armhf 1:2.8.5-3ubuntu3 [36.1 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcre2-8-0 armhf 10.35-2ubuntu1 [169 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute/main armhf libselinux1 armhf 3.1-2build2 [61.0 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute/main armhf libsemanage-common all 3.1-1build2 [10.0 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main armhf libsemanage1 armhf 3.1-1build2 [75.6 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute/main armhf passwd armhf 1:4.8.1-1ubuntu8 [751 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/main armhf adduser all 3.118ubuntu5 [156 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/main armhf systemd-timesyncd armhf 247.1-4ubuntu1 [27.7 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main armhf libapparmor1 armhf 3.0.0-0ubuntu5 [30.4 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main armhf libblkid1 armhf 2.36.1-1ubuntu2 [117 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main armhf libudev1 armhf 247.1-4ubuntu1 [61.5 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute/main armhf libdevmapper1.02.1 armhf 2:1.02.167-1ubuntu4 [120 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main armhf libuuid1 armhf 2.36.1-1ubuntu2 [20.4 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute/main armhf libcryptsetup12 armhf 2:2.3.4-1ubuntu1 [174 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute/main armhf libidn2-0 armhf 2.3.0-5 [49.6 kB] Get:71 http://ftpmaster.internal/ubuntu hirsute/main armhf libp11-kit0 armhf 0.23.22-1 [170 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main armhf libgnutls30 armhf 3.7.0-5ubuntu1 [860 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute/main armhf libip4tc2 armhf 1.8.5-3ubuntu4 [16.7 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute/main armhf libseccomp2 armhf 2.4.3-1ubuntu6 [32.5 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main armhf mount armhf 2.36.1-1ubuntu2 [113 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute/main armhf systemd armhf 247.1-4ubuntu1 [3806 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main armhf libsystemd0 armhf 247.1-4ubuntu1 [250 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute/main armhf libzstd1 armhf 1.4.8+dfsg-1 [258 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main armhf libapt-pkg6.0 armhf 2.1.18 [819 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main armhf gpgv armhf 2.2.20-1ubuntu2 [172 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main armhf apt armhf 2.1.18 [1275 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main armhf init armhf 1.59 [6164 B] Get:83 http://ftpmaster.internal/ubuntu hirsute/main armhf libacl1 armhf 2.2.53-9 [14.9 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main armhf libattr1 armhf 1:2.4.48-6 [11.7 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main armhf libmount1 armhf 2.36.1-1ubuntu2 [131 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/main armhf libsmartcols1 armhf 2.36.1-1ubuntu2 [82.3 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main armhf g++-10 armhf 10.2.1-6ubuntu1 [7613 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main armhf gcc-10 armhf 10.2.1-6ubuntu1 [13.6 MB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main armhf libstdc++-10-dev armhf 10.2.1-6ubuntu1 [1815 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main armhf libgcc-10-dev armhf 10.2.1-6ubuntu1 [717 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute/main armhf libisl23 armhf 0.23-1 [513 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute/main armhf libmpc3 armhf 1.2.0-1 [36.1 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute/main armhf libctf0 armhf 2.35.50.20210106-1ubuntu2 [82.2 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute/main armhf libctf-nobfd0 armhf 2.35.50.20210106-1ubuntu2 [80.9 kB] Get:95 http://ftpmaster.internal/ubuntu hirsute/main armhf binutils-arm-linux-gnueabihf armhf 2.35.50.20210106-1ubuntu2 [2484 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/main armhf libbinutils armhf 2.35.50.20210106-1ubuntu2 [421 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/main armhf binutils armhf 2.35.50.20210106-1ubuntu2 [3388 B] Get:98 http://ftpmaster.internal/ubuntu hirsute/main armhf binutils-common armhf 2.35.50.20210106-1ubuntu2 [216 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute/main armhf cpp-10 armhf 10.2.1-6ubuntu1 [6637 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/main armhf gcc-10-base armhf 10.2.1-6ubuntu1 [19.7 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/main armhf sensible-utils all 0.0.14 [13.5 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main armhf libcap2 armhf 1:2.44-1 [14.7 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute/main armhf readline-common all 8.1-1 [54.1 kB] Get:104 http://ftpmaster.internal/ubuntu hirsute/main armhf libreadline8 armhf 8.1-1 [115 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/main armhf libsqlite3-0 armhf 3.34.0-1 [504 kB] Get:106 http://ftpmaster.internal/ubuntu hirsute/main armhf openssl armhf 1.1.1f-1ubuntu5 [597 kB] Get:107 http://ftpmaster.internal/ubuntu hirsute/main armhf tzdata all 2020f-1ubuntu2 [294 kB] Get:108 http://ftpmaster.internal/ubuntu hirsute/main armhf dpkg-dev all 1.20.7.1ubuntu1 [934 kB] Get:109 http://ftpmaster.internal/ubuntu hirsute/main armhf libdpkg-perl all 1.20.7.1ubuntu1 [232 kB] Get:110 http://ftpmaster.internal/ubuntu hirsute/main armhf patch armhf 2.7.6-7 [102 kB] Get:111 http://ftpmaster.internal/ubuntu hirsute/main armhf libfakeroot armhf 1.25.3-1.1 [23.2 kB] Get:112 http://ftpmaster.internal/ubuntu hirsute/main armhf fakeroot armhf 1.25.3-1.1 [60.9 kB] Get:113 http://ftpmaster.internal/ubuntu hirsute/main armhf libnpth0 armhf 1.6-3 [6980 B] Get:114 http://ftpmaster.internal/ubuntu hirsute/main armhf gpg armhf 2.2.20-1ubuntu2 [429 kB] Get:115 http://ftpmaster.internal/ubuntu hirsute/main armhf gpgconf armhf 2.2.20-1ubuntu2 [108 kB] Get:116 http://ftpmaster.internal/ubuntu hirsute/main armhf gpg-agent armhf 2.2.20-1ubuntu2 [196 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 72.4 MB in 3s (21.9 MB/s) (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_armhf.deb ... Unpacking libcrypt-dev:armhf (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libc6-dev_2.32-0ubuntu6_armhf.deb ... Unpacking libc6-dev:armhf (2.32-0ubuntu6) over (2.32-0ubuntu3) ... Preparing to unpack .../libc-dev-bin_2.32-0ubuntu6_armhf.deb ... Unpacking libc-dev-bin (2.32-0ubuntu6) over (2.32-0ubuntu3) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_armhf.deb ... Unpacking libcrypt1:armhf (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:armhf (1:4.4.17-1ubuntu1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../0-linux-libc-dev_5.8.0-36.40+21.04.1_armhf.deb ... Unpacking linux-libc-dev:armhf (5.8.0-36.40+21.04.1) over (5.8.0-25.26) ... Preparing to unpack .../1-libtirpc-common_1.3.1-1_all.deb ... Unpacking libtirpc-common (1.3.1-1) over (1.2.6-1build1) ... 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Setting up linux-libc-dev:armhf (5.8.0-36.40+21.04.1) ... Setting up libctf-nobfd0:armhf (2.35.50.20210106-1ubuntu2) ... Setting up libnpth0:armhf (1.6-3) ... Setting up libgomp1:armhf (11-20210123-1ubuntu1) ... Setting up libcap2:armhf (1:2.44-1) ... Setting up libfakeroot:armhf (1.25.3-1.1) ... Setting up libasan6:armhf (11-20210123-1ubuntu1) ... Setting up libkrb5support0:armhf (1.18.3-4) ... Setting up tzdata (2020f-1ubuntu2) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Jan 26 22:27:25 UTC 2021. Universal Time is now: Tue Jan 26 22:27:25 UTC 2021. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.25.3-1.1) ... Setting up gcc-10-base:armhf (10.2.1-6ubuntu1) ... Setting up libncurses6:armhf (6.2+20201114-2) ... Setting up libmpc3:armhf (1.2.0-1) ... Setting up libatomic1:armhf (11-20210123-1ubuntu1) ... Setting up patch (2.7.6-7) ... Setting up libncursesw6:armhf (6.2+20201114-2) ... Setting up libk5crypto3:armhf (1.18.3-4) ... Setting up libubsan1:armhf (11-20210123-1ubuntu1) ... Setting up sensible-utils (0.0.14) ... Setting up libcrypt-dev:armhf (1:4.4.17-1ubuntu1) ... Setting up libkrb5-3:armhf (1.18.3-4) ... Setting up libbinutils:armhf (2.35.50.20210106-1ubuntu2) ... Setting up libisl23:armhf (0.23-1) ... Setting up libc-dev-bin (2.32-0ubuntu6) ... Setting up openssl (1.1.1f-1ubuntu5) ... Setting up readline-common (8.1-1) ... Setting up libcc1-0:armhf (11-20210123-1ubuntu1) ... Setting up cpp-10 (10.2.1-6ubuntu1) ... Setting up libgdbm6:armhf (1.19-2) ... Setting up libctf0:armhf (2.35.50.20210106-1ubuntu2) ... Setting up libgcc-10-dev:armhf (10.2.1-6ubuntu1) ... Setting up libreadline8:armhf (8.1-1) ... Setting up libgssapi-krb5-2:armhf (1.18.3-4) ... Setting up libgdbm-compat4:armhf (1.19-2) ... Setting up libperl5.32:armhf (5.32.0-6) ... Setting up gpgconf (2.2.20-1ubuntu2) ... Setting up binutils-arm-linux-gnueabihf (2.35.50.20210106-1ubuntu2) ... Setting up gpg (2.2.20-1ubuntu2) ... Setting up libtirpc3:armhf (1.3.1-1) ... Setting up gpg-agent (2.2.20-1ubuntu2) ... Setting up binutils (2.35.50.20210106-1ubuntu2) ... Setting up perl (5.32.0-6) ... Setting up libtirpc-dev:armhf (1.3.1-1) ... Setting up gcc-10 (10.2.1-6ubuntu1) ... Setting up libdpkg-perl (1.20.7.1ubuntu1) ... Setting up libc6-dev:armhf (2.32-0ubuntu6) ... Setting up libstdc++-10-dev:armhf (10.2.1-6ubuntu1) ... Setting up g++-10 (10.2.1-6ubuntu1) ... Setting up dpkg-dev (1.20.7.1ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu6) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20662121 armhf hirsute -c chroot:build-PACKAGEBUILD-20662121 --arch=armhf --dist=hirsute --nolog openms_2.5.0+cleaned1-5build1.dsc Initiating build PACKAGEBUILD-20662121 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-134-generic #138-Ubuntu SMP Fri Jan 15 10:57:23 UTC 2021 armv7l sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-arm64-069.buildd +==============================================================================+ | openms 2.5.0+cleaned1-5build1 (armhf) Tue, 26 Jan 2021 22:27:29 +0000 | +==============================================================================+ Package: openms Version: 2.5.0+cleaned1-5build1 Source Version: 2.5.0+cleaned1-5build1 Distribution: hirsute Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20662121/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- openms_2.5.0+cleaned1-5build1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/openms-Iyfu7i/openms-2.5.0+cleaned1' with '<>' I: NOTICE: Log filtering will replace 'build/openms-Iyfu7i' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-tBvpVo/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-tBvpVo/apt_archive ./ InRelease Get:2 copy:/<>/resolver-tBvpVo/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-tBvpVo/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-tBvpVo/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-tBvpVo/apt_archive ./ Packages [433 B] Fetched 1739 B in 0s (43.3 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 3 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-tBvpVo/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (48.4 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14723 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev (>= 1.67.0), libboost-iostreams-dev (>= 1.67.0), libboost-date-time-dev (>= 1.67.0), libboost-math-dev (>= 1.67.0), libsqlite3-dev, seqan-dev (>= 1.4.2), libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended Filtered Build-Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev (>= 1.67.0), libboost-iostreams-dev (>= 1.67.0), libboost-date-time-dev (>= 1.67.0), libboost-math-dev (>= 1.67.0), libsqlite3-dev, seqan-dev (>= 1.4.2), libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended dpkg-deb: building package 'sbuild-build-depends-openms-dummy' in '/<>/resolver-tBvpVo/apt_archive/sbuild-build-depends-openms-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-openms-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-tBvpVo/apt_archive ./ InRelease Get:2 copy:/<>/resolver-tBvpVo/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-tBvpVo/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-tBvpVo/apt_archive ./ Sources [804 B] Get:5 copy:/<>/resolver-tBvpVo/apt_archive ./ Packages [886 B] Fetched 2653 B in 0s (45.6 kB/s) Reading package lists... Reading package lists... Install openms build dependencies (apt-based resolver) ------------------------------------------------------ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data coinor-libcbc-dev coinor-libcbc3 coinor-libcgl-dev coinor-libcgl1 coinor-libclp-dev coinor-libclp1 coinor-libcoinutils-dev coinor-libcoinutils3v5 coinor-libosi-dev coinor-libosi1v5 cppcheck debhelper dh-autoreconf dh-exec dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern fonts-urw-base35 gettext gettext-base ghostscript graphviz groff-base hdf5-helpers hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common imagemagick-6.q16 intltool-debian libaec-dev libaec0 libamd2 libapache-pom-java libarchive-zip-perl libarchive13 libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3 libboost-date-time-dev libboost-date-time1.74-dev libboost-date-time1.74.0 libboost-dev libboost-iostreams-dev libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-math-dev libboost-math1.74-dev libboost-math1.74.0 libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev libboost-serialization1.74.0 libboost1.74-dev libbrotli1 libbsd0 libbtf1 libbz2-dev libcairo2 libcamd2 libccolamd2 libcdt5 libcgraph6 libcholmod3 libclang-cpp11 libclang1-11 libcolamd2 libcommons-logging-java libcommons-parent-java libcups2 libcurl3-gnutls libcurl4 libcxsparse3 libdatrie1 libdbus-1-3 libdebhelper-perl libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-dev libegl-mesa0 libegl1 libeigen3-dev libelf1 libevdev2 libexpat1 libfftw3-double3 libfile-stripnondeterminism-perl libfontbox-java libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgbm1 libgd3 libgfortran5 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libgles-dev libgles1 libgles2 libglib2.0-0 libglpk-dev libglpk40 libglvnd0 libglx-dev libglx-mesa0 libglx0 libgmp-dev libgmpxx4ldbl libgraphblas3 libgraphite2-3 libgs9 libgs9-common libgssapi3-heimdal libgts-0.7-5 libgudev-1.0-0 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu67 libidn11 libijs-0.35 libinput-bin libinput10 libjbig0 libjbig2dec0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjsoncpp24 libklu1 libkpathsea6 libkrb5-26-heimdal liblab-gamut1 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldl2 libllvm11 liblqr-1-0 libltdl7 libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmd4c0 libmetis5 libmime-charset-perl libmongoose2 libmpdec3 libmtdev1 libnghttp2-14 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpcre2-16-0 libpdfbox-java libpipeline1 libpixman-1-0 libpsl5 libptexenc1 libpthread-stubs0-dev libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5opengl5 libqt5opengl5-dev libqt5printsupport5 libqt5sql5 libqt5svg5 libqt5svg5-dev libqt5test5 libqt5widgets5 libqt5xml5 librbio2 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsliplu1 libsm6 libsombok3 libspqr2 libsqlite3-dev libssh-4 libsub-override-perl libsuitesparse-dev libsuitesparseconfig5 libsvm-dev libsvm3 libsynctex2 libsz2 libteckit0 libtexlua53 libtexluajit2 libthai-data libthai0 libtiff5 libtinyxml2-8 libtool libuchardet0 libumfpack5 libunicode-linebreak-perl libuv1 libvulkan-dev libvulkan1 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpmux3 libwildmagic-common libwildmagic-dev libwildmagic5 libwind0-heimdal libx11-6 libx11-data libx11-dev libx11-xcb1 libxapian30 libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes3 libxi6 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxmu6 libxpm4 libxrender1 libxshmfence1 libxt6 libxxf86vm1 libz3-4 libzzip-0-13 lmodern m4 mailcap man-db media-types mime-support pkg-config po-debconf poppler-data preview-latex-style python3 python3-minimal python3-pkg-resources python3-pygments python3.9 python3.9-minimal qt5-qmake qt5-qmake-bin qtbase5-dev qtbase5-dev-tools qtchooser seqan-dev shared-mime-info t1utils tex-common tex-gyre texlive-base texlive-binaries texlive-extra-utils texlive-font-utils texlive-fonts-extra texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-luatex texlive-pictures texlive-plain-generic ucf x11-common x11proto-core-dev x11proto-dev x11proto-xext-dev xdg-utils xfonts-encodings xfonts-utils xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build cppcheck-gui clang clang-tidy dh-make doxygen-latex doxygen-doc doxygen-gui fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre gettext-doc libasprintf-dev libgettextpo-dev ghostscript-x gsfonts graphviz-doc groff imagemagick-doc autotrace cups-bsd | lpr | lprng curl enscript ffmpeg gimp gnuplot grads hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils transfig ufraw-batch lrzip liblapack-doc libboost-doc libboost1.74-doc libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev libboost-context1.74-dev libboost-contract1.74-dev libboost-coroutine1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev libboost-filesystem1.74-dev libboost-graph1.74-dev libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev libboost-program-options1.74-dev libboost-python1.74-dev libboost-random1.74-dev libboost-stacktrace1.74-dev libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev libavalon-framework-java libcommons-logging-java-doc libexcalibur-logkit-java liblog4j1.2-java cups-common libeigen3-doc libfftw3-bin libfftw3-dev libgd-tools libiodbc2-dev default-libmysqlclient-dev gmp-doc libgmp10-doc libmpfr-dev libhdf5-doc icu-doc liblcms2-utils libmagickcore-6.q16-6-extra libencode-hanextra-perl libpod2-base-perl qt5-image-formats-plugins qtwayland5 lm-sensors sqlite3-doc libtool-doc gfortran | fortran95-compiler gcj-jdk libx11-doc xapian-tools libxcb-doc libxerces-c-doc libxext-doc m4-doc apparmor less www-browser libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum python3-doc python3-tk python3-venv python3-setuptools python-pygments-doc ttf-bitstream-vera python3.9-venv python3.9-doc binfmt-support firebird-dev libpq-dev unixodbc-dev perl-tk xpdf | pdf-viewer xzdec chktex default-jre-headless dvidvi dvipng fragmaster lacheck latexdiff latexmk purifyeps xindy lcdf-typetools psutils cm-super texlive-fonts-extra-doc texlive-fonts-recommended-doc texlive-latex-base-doc icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex Recommended packages: curl | wget | lynx fonts-liberation libmagickcore-6.q16-6-extra netpbm bzip2-doc dbus libarchive-cpio-perl libglib2.0-data xdg-user-dirs fonts-droid-fallback libgts-bin javascript-common libldap-common gsfonts publicsuffix qttranslations5-l10n qt5-gtk-platformtheme libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase libsasl2-modules libltdl-dev mesa-vulkan-drivers | vulkan-icd libwacom-bin libmail-sendmail-perl fonts-texgyre dvisvgm libfile-homedir-perl liblog-log4perl-perl libyaml-tiny-perl ruby | ruby-interpreter ps2eps fonts-adf-accanthis fonts-adf-berenis fonts-adf-gillius fonts-adf-universalis fonts-cabin fonts-cantarell fonts-comfortaa fonts-croscore fonts-crosextra-caladea fonts-crosextra-carlito fonts-dejavu-extra fonts-ebgaramond fonts-ebgaramond-extra fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-go fonts-junicode fonts-lato fonts-linuxlibertine fonts-lobstertwo fonts-noto-color-emoji fonts-noto-core fonts-noto-mono fonts-oflb-asana-math fonts-open-sans fonts-roboto-unhinted fonts-sil-charis fonts-sil-gentium fonts-sil-gentium-basic fonts-sil-gentiumplus fonts-sil-gentiumplus-compact fonts-stix texlive-fonts-extra-links tipa tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data coinor-libcbc-dev coinor-libcbc3 coinor-libcgl-dev coinor-libcgl1 coinor-libclp-dev coinor-libclp1 coinor-libcoinutils-dev coinor-libcoinutils3v5 coinor-libosi-dev coinor-libosi1v5 cppcheck debhelper dh-autoreconf dh-exec dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern fonts-urw-base35 gettext gettext-base ghostscript graphviz groff-base hdf5-helpers hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common imagemagick-6.q16 intltool-debian libaec-dev libaec0 libamd2 libapache-pom-java libarchive-zip-perl libarchive13 libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3 libboost-date-time-dev libboost-date-time1.74-dev libboost-date-time1.74.0 libboost-dev libboost-iostreams-dev libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-math-dev libboost-math1.74-dev libboost-math1.74.0 libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev libboost-serialization1.74.0 libboost1.74-dev libbrotli1 libbsd0 libbtf1 libbz2-dev libcairo2 libcamd2 libccolamd2 libcdt5 libcgraph6 libcholmod3 libclang-cpp11 libclang1-11 libcolamd2 libcommons-logging-java libcommons-parent-java libcups2 libcurl3-gnutls libcurl4 libcxsparse3 libdatrie1 libdbus-1-3 libdebhelper-perl libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-dev libegl-mesa0 libegl1 libeigen3-dev libelf1 libevdev2 libexpat1 libfftw3-double3 libfile-stripnondeterminism-perl libfontbox-java libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgbm1 libgd3 libgfortran5 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libgles-dev libgles1 libgles2 libglib2.0-0 libglpk-dev libglpk40 libglvnd0 libglx-dev libglx-mesa0 libglx0 libgmp-dev libgmpxx4ldbl libgraphblas3 libgraphite2-3 libgs9 libgs9-common libgssapi3-heimdal libgts-0.7-5 libgudev-1.0-0 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu67 libidn11 libijs-0.35 libinput-bin libinput10 libjbig0 libjbig2dec0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjsoncpp24 libklu1 libkpathsea6 libkrb5-26-heimdal liblab-gamut1 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldl2 libllvm11 liblqr-1-0 libltdl7 libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmd4c0 libmetis5 libmime-charset-perl libmongoose2 libmpdec3 libmtdev1 libnghttp2-14 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpcre2-16-0 libpdfbox-java libpipeline1 libpixman-1-0 libpsl5 libptexenc1 libpthread-stubs0-dev libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5opengl5 libqt5opengl5-dev libqt5printsupport5 libqt5sql5 libqt5svg5 libqt5svg5-dev libqt5test5 libqt5widgets5 libqt5xml5 librbio2 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsliplu1 libsm6 libsombok3 libspqr2 libsqlite3-dev libssh-4 libsub-override-perl libsuitesparse-dev libsuitesparseconfig5 libsvm-dev libsvm3 libsynctex2 libsz2 libteckit0 libtexlua53 libtexluajit2 libthai-data libthai0 libtiff5 libtinyxml2-8 libtool libuchardet0 libumfpack5 libunicode-linebreak-perl libuv1 libvulkan-dev libvulkan1 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpmux3 libwildmagic-common libwildmagic-dev libwildmagic5 libwind0-heimdal libx11-6 libx11-data libx11-dev libx11-xcb1 libxapian30 libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes3 libxi6 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxmu6 libxpm4 libxrender1 libxshmfence1 libxt6 libxxf86vm1 libz3-4 libzzip-0-13 lmodern m4 mailcap man-db media-types mime-support pkg-config po-debconf poppler-data preview-latex-style python3 python3-minimal python3-pkg-resources python3-pygments python3.9 python3.9-minimal qt5-qmake qt5-qmake-bin qtbase5-dev qtbase5-dev-tools qtchooser sbuild-build-depends-openms-dummy seqan-dev shared-mime-info t1utils tex-common tex-gyre texlive-base texlive-binaries texlive-extra-utils texlive-font-utils texlive-fonts-extra texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-luatex texlive-pictures texlive-plain-generic ucf x11-common x11proto-core-dev x11proto-dev x11proto-xext-dev xdg-utils xfonts-encodings xfonts-utils xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 367 newly installed, 0 to remove and 3 not upgraded. Need to get 849 MB of archives. After this operation, 2847 MB of additional disk space will be used. 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hirsute/main armhf libxcb-xkb1 armhf 1.14-2.1 [26.1 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/main armhf xkb-data all 2.29-2 [349 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main armhf libxkbcommon0 armhf 1.0.3-2 [87.4 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute/main armhf libxkbcommon-x11-0 armhf 1.0.3-2 [11.9 kB] Get:104 http://ftpmaster.internal/ubuntu hirsute/main armhf libxrender1 armhf 1:0.9.10-1 [15.6 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/universe armhf libqt5gui5 armhf 5.15.2+dfsg-2 [2573 kB] Get:106 http://ftpmaster.internal/ubuntu hirsute/universe armhf libqt5widgets5 armhf 5.15.2+dfsg-2 [2047 kB] Get:107 http://ftpmaster.internal/ubuntu hirsute/universe armhf libqt5svg5 armhf 5.15.2-2 [114 kB] Get:108 http://ftpmaster.internal/ubuntu hirsute/universe armhf libqt5svg5-dev armhf 5.15.2-2 [11.0 kB] Get:109 http://ftpmaster.internal/ubuntu hirsute/main armhf poppler-data all 0.4.10-1 [1601 kB] Get:110 http://ftpmaster.internal/ubuntu hirsute/universe armhf tex-common all 6.15 [33.0 kB] Get:111 http://ftpmaster.internal/ubuntu hirsute/main armhf libmagic-mgc armhf 1:5.39-3 [228 kB] Get:112 http://ftpmaster.internal/ubuntu hirsute/main armhf libmagic1 armhf 1:5.39-3 [71.7 kB] Get:113 http://ftpmaster.internal/ubuntu hirsute/main armhf file armhf 1:5.39-3 [22.7 kB] Get:114 http://ftpmaster.internal/ubuntu hirsute/main armhf libelf1 armhf 0.182-3 [39.7 kB] Get:115 http://ftpmaster.internal/ubuntu hirsute/main armhf libfribidi0 armhf 1.0.8-2 [21.8 kB] Get:116 http://ftpmaster.internal/ubuntu hirsute/main armhf python3-pkg-resources all 51.1.0-1 [143 kB] Get:117 http://ftpmaster.internal/ubuntu hirsute/main armhf gettext-base armhf 0.21-3ubuntu2 [36.2 kB] Get:118 http://ftpmaster.internal/ubuntu hirsute/main armhf libedit2 armhf 3.1-20191231-2 [72.5 kB] Get:119 http://ftpmaster.internal/ubuntu hirsute/main armhf libpsl5 armhf 0.21.0-1.1ubuntu1 [51.1 kB] Get:120 http://ftpmaster.internal/ubuntu hirsute/main armhf libuv1 armhf 1.40.0-1 [68.7 kB] Get:121 http://ftpmaster.internal/ubuntu hirsute/main armhf libsigsegv2 armhf 2.12-3 [13.1 kB] Get:122 http://ftpmaster.internal/ubuntu hirsute/main armhf m4 armhf 1.4.18-5 [187 kB] Get:123 http://ftpmaster.internal/ubuntu hirsute/main armhf autoconf all 2.69-14 [293 kB] Get:124 http://ftpmaster.internal/ubuntu hirsute/main armhf autotools-dev all 20180224.1+nmu1 [39.4 kB] Get:125 http://ftpmaster.internal/ubuntu hirsute/main armhf automake all 1:1.16.3-2ubuntu1 [552 kB] Get:126 http://ftpmaster.internal/ubuntu hirsute/main armhf autopoint all 0.21-3ubuntu2 [422 kB] Get:127 http://ftpmaster.internal/ubuntu hirsute/main armhf cmake-data all 3.18.4-1ubuntu3 [1705 kB] Get:128 http://ftpmaster.internal/ubuntu hirsute/main armhf libarchive13 armhf 3.4.3-2 [294 kB] Get:129 http://ftpmaster.internal/ubuntu hirsute/main armhf libroken18-heimdal armhf 7.7.0+dfsg-2 [34.5 kB] Get:130 http://ftpmaster.internal/ubuntu hirsute/main armhf libasn1-8-heimdal armhf 7.7.0+dfsg-2 [140 kB] Get:131 http://ftpmaster.internal/ubuntu hirsute/main armhf libheimbase1-heimdal armhf 7.7.0+dfsg-2 [24.3 kB] Get:132 http://ftpmaster.internal/ubuntu hirsute/main armhf libhcrypto4-heimdal armhf 7.7.0+dfsg-2 [78.5 kB] Get:133 http://ftpmaster.internal/ubuntu hirsute/main armhf libwind0-heimdal armhf 7.7.0+dfsg-2 [47.2 kB] Get:134 http://ftpmaster.internal/ubuntu hirsute/main armhf libhx509-5-heimdal armhf 7.7.0+dfsg-2 [88.8 kB] Get:135 http://ftpmaster.internal/ubuntu hirsute/main armhf libkrb5-26-heimdal armhf 7.7.0+dfsg-2 [170 kB] Get:136 http://ftpmaster.internal/ubuntu hirsute/main armhf libheimntlm0-heimdal armhf 7.7.0+dfsg-2 [13.2 kB] Get:137 http://ftpmaster.internal/ubuntu hirsute/main armhf libgssapi3-heimdal armhf 7.7.0+dfsg-2 [79.9 kB] Get:138 http://ftpmaster.internal/ubuntu hirsute/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2ubuntu1 [13.2 kB] Get:139 http://ftpmaster.internal/ubuntu hirsute/main armhf libsasl2-2 armhf 2.1.27+dfsg-2ubuntu1 [42.4 kB] Get:140 http://ftpmaster.internal/ubuntu hirsute/main armhf libldap-2.4-2 armhf 2.4.56+dfsg-1ubuntu1 [134 kB] Get:141 http://ftpmaster.internal/ubuntu hirsute/main armhf libnghttp2-14 armhf 1.42.0-1 [60.7 kB] Get:142 http://ftpmaster.internal/ubuntu hirsute/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build2 [48.9 kB] Get:143 http://ftpmaster.internal/ubuntu hirsute/main armhf libssh-4 armhf 0.9.5-1 [147 kB] Get:144 http://ftpmaster.internal/ubuntu hirsute/main armhf libcurl4 armhf 7.72.0-1ubuntu1 [207 kB] Get:145 http://ftpmaster.internal/ubuntu hirsute/main armhf libjsoncpp24 armhf 1.9.4-4 [65.1 kB] Get:146 http://ftpmaster.internal/ubuntu hirsute/main armhf librhash0 armhf 1.4.1-1 [134 kB] Get:147 http://ftpmaster.internal/ubuntu hirsute/main armhf cmake armhf 3.18.4-1ubuntu3 [3515 kB] Get:148 http://ftpmaster.internal/ubuntu hirsute/universe armhf libtinyxml2-8 armhf 8.0.0+dfsg-2 [23.7 kB] Get:149 http://ftpmaster.internal/ubuntu hirsute/universe armhf libz3-4 armhf 4.8.9-1ubuntu1 [5788 kB] Get:150 http://ftpmaster.internal/ubuntu hirsute/main armhf python3-pygments all 2.7.1+dfsg-1 [639 kB] Get:151 http://ftpmaster.internal/ubuntu hirsute/universe armhf cppcheck armhf 2.3-1 [1547 kB] Get:152 http://ftpmaster.internal/ubuntu hirsute/main armhf libtool all 2.4.6-15 [161 kB] Get:153 http://ftpmaster.internal/ubuntu hirsute/main armhf dh-autoreconf all 19 [16.1 kB] Get:154 http://ftpmaster.internal/ubuntu hirsute/main armhf libdebhelper-perl all 13.3.1ubuntu1 [62.2 kB] Get:155 http://ftpmaster.internal/ubuntu hirsute/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] Get:156 http://ftpmaster.internal/ubuntu hirsute/main armhf libsub-override-perl all 0.09-2 [9532 B] Get:157 http://ftpmaster.internal/ubuntu hirsute/main armhf libfile-stripnondeterminism-perl all 1.10.0-1 [17.0 kB] Get:158 http://ftpmaster.internal/ubuntu hirsute/main armhf dh-strip-nondeterminism all 1.10.0-1 [5228 B] Get:159 http://ftpmaster.internal/ubuntu hirsute/main armhf dwz armhf 0.13+20210118-1 [178 kB] Get:160 http://ftpmaster.internal/ubuntu hirsute/main armhf gettext armhf 0.21-3ubuntu2 [756 kB] Get:161 http://ftpmaster.internal/ubuntu hirsute/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:162 http://ftpmaster.internal/ubuntu hirsute/main armhf po-debconf all 1.0.21+nmu1 [233 kB] Get:163 http://ftpmaster.internal/ubuntu hirsute/main armhf debhelper all 13.3.1ubuntu1 [882 kB] Get:164 http://ftpmaster.internal/ubuntu hirsute/main armhf libllvm11 armhf 1:11.0.1-2 [15.4 MB] Get:165 http://ftpmaster.internal/ubuntu hirsute/universe armhf libclang-cpp11 armhf 1:11.0.1-2 [8125 kB] Get:166 http://ftpmaster.internal/ubuntu hirsute/universe armhf libclang1-11 armhf 1:11.0.1-2 [4536 kB] Get:167 http://ftpmaster.internal/ubuntu hirsute/universe armhf libxapian30 armhf 1.4.18-1 [562 kB] Get:168 http://ftpmaster.internal/ubuntu hirsute/universe armhf doxygen armhf 1.8.20-6 [3465 kB] Get:169 http://ftpmaster.internal/ubuntu hirsute/universe armhf fonts-lmodern all 2.004.5-6.1 [4532 kB] Get:170 http://ftpmaster.internal/ubuntu hirsute/main armhf libgs9-common all 9.53.3~dfsg-6 [688 kB] Get:171 http://ftpmaster.internal/ubuntu hirsute/main armhf libavahi-common-data armhf 0.8-3ubuntu2 [25.2 kB] Get:172 http://ftpmaster.internal/ubuntu hirsute/main armhf libavahi-common3 armhf 0.8-3ubuntu2 [18.6 kB] Get:173 http://ftpmaster.internal/ubuntu hirsute/main armhf libavahi-client3 armhf 0.8-3ubuntu2 [22.0 kB] Get:174 http://ftpmaster.internal/ubuntu hirsute/main armhf libcups2 armhf 2.3.3op1-5ubuntu1 [201 kB] Get:175 http://ftpmaster.internal/ubuntu hirsute/main armhf libidn11 armhf 1.33-3 [43.1 kB] Get:176 http://ftpmaster.internal/ubuntu hirsute/main armhf libijs-0.35 armhf 0.35-15 [14.0 kB] Get:177 http://ftpmaster.internal/ubuntu hirsute/main armhf libjbig2dec0 armhf 0.19-1 [53.8 kB] Get:178 http://ftpmaster.internal/ubuntu hirsute/main armhf libpaper1 armhf 1.1.28 [12.1 kB] Get:179 http://ftpmaster.internal/ubuntu hirsute/main armhf libgs9 armhf 9.53.3~dfsg-6 [1851 kB] Get:180 http://ftpmaster.internal/ubuntu hirsute/main armhf ghostscript armhf 9.53.3~dfsg-6 [48.7 kB] Get:181 http://ftpmaster.internal/ubuntu hirsute/universe armhf libcdt5 armhf 2.42.2-4build2 [17.6 kB] Get:182 http://ftpmaster.internal/ubuntu hirsute/universe armhf libcgraph6 armhf 2.42.2-4build2 [34.8 kB] Get:183 http://ftpmaster.internal/ubuntu hirsute/main armhf libxpm4 armhf 1:3.5.12-1 [29.0 kB] Get:184 http://ftpmaster.internal/ubuntu hirsute/main armhf libgd3 armhf 2.3.0-2 [99.7 kB] Get:185 http://ftpmaster.internal/ubuntu hirsute/universe armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [132 kB] Get:186 http://ftpmaster.internal/ubuntu hirsute/main armhf libpixman-1-0 armhf 0.40.0-1 [159 kB] Get:187 http://ftpmaster.internal/ubuntu hirsute/main armhf libcairo2 armhf 1.16.0-5 [509 kB] Get:188 http://ftpmaster.internal/ubuntu hirsute/main armhf libthai-data all 0.1.28-3 [134 kB] Get:189 http://ftpmaster.internal/ubuntu hirsute/main armhf libdatrie1 armhf 0.2.12-3 [15.2 kB] Get:190 http://ftpmaster.internal/ubuntu hirsute/main armhf libthai0 armhf 0.1.28-3 [14.7 kB] Get:191 http://ftpmaster.internal/ubuntu hirsute/main armhf libpango-1.0-0 armhf 1.46.2-3 [150 kB] Get:192 http://ftpmaster.internal/ubuntu hirsute/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [30.3 kB] Get:193 http://ftpmaster.internal/ubuntu hirsute/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [21.1 kB] Get:194 http://ftpmaster.internal/ubuntu hirsute/universe armhf libpathplan4 armhf 2.42.2-4build2 [19.7 kB] Get:195 http://ftpmaster.internal/ubuntu hirsute/universe armhf libgvc6 armhf 2.42.2-4build2 [552 kB] Get:196 http://ftpmaster.internal/ubuntu hirsute/universe armhf libgvpr2 armhf 2.42.2-4build2 [142 kB] Get:197 http://ftpmaster.internal/ubuntu hirsute/universe armhf liblab-gamut1 armhf 2.42.2-4build2 [178 kB] Get:198 http://ftpmaster.internal/ubuntu hirsute/main armhf libxt6 armhf 1:1.2.0-1 [133 kB] Get:199 http://ftpmaster.internal/ubuntu hirsute/main armhf libxmu6 armhf 2:1.1.3-0ubuntu1 [38.3 kB] Get:200 http://ftpmaster.internal/ubuntu hirsute/main armhf libxaw7 armhf 2:1.0.13-1.1 [140 kB] Get:201 http://ftpmaster.internal/ubuntu hirsute/universe armhf graphviz armhf 2.42.2-4build2 [478 kB] Get:202 http://ftpmaster.internal/ubuntu hirsute/universe armhf hdf5-helpers armhf 1.10.6+repack-2 [13.7 kB] Get:203 http://ftpmaster.internal/ubuntu hirsute/main armhf hicolor-icon-theme all 0.17-2 [9976 B] Get:204 http://ftpmaster.internal/ubuntu hirsute/main armhf icu-devtools armhf 67.1-5 [169 kB] Get:205 http://ftpmaster.internal/ubuntu hirsute/universe armhf imagemagick-6.q16 armhf 8:6.9.10.23+dfsg-2.1ubuntu15 [427 kB] Get:206 http://ftpmaster.internal/ubuntu hirsute/universe armhf imagemagick armhf 8:6.9.10.23+dfsg-2.1ubuntu15 [14.4 kB] Get:207 http://ftpmaster.internal/ubuntu hirsute/universe armhf libaec0 armhf 1.0.4-1 [19.4 kB] Get:208 http://ftpmaster.internal/ubuntu hirsute/main armhf libsuitesparseconfig5 armhf 1:5.8.1+dfsg-2 [9588 B] Get:209 http://ftpmaster.internal/ubuntu hirsute/main armhf libamd2 armhf 1:5.8.1+dfsg-2 [13.9 kB] Get:210 http://ftpmaster.internal/ubuntu hirsute/universe armhf libapache-pom-java all 18-1 [4720 B] Get:211 http://ftpmaster.internal/ubuntu hirsute/main armhf libblas3 armhf 3.9.0-3ubuntu1 [97.8 kB] Get:212 http://ftpmaster.internal/ubuntu hirsute/main armhf libblas-dev armhf 3.9.0-3ubuntu1 [104 kB] Get:213 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost1.74-dev armhf 1.74.0-3ubuntu2 [9508 kB] Get:214 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-date-time1.74.0 armhf 1.74.0-3ubuntu2 [215 kB] Get:215 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-serialization1.74.0 armhf 1.74.0-3ubuntu2 [294 kB] Get:216 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-serialization1.74-dev armhf 1.74.0-3ubuntu2 [364 kB] Get:217 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-date-time1.74-dev armhf 1.74.0-3ubuntu2 [221 kB] Get:218 http://ftpmaster.internal/ubuntu hirsute/universe armhf libboost-date-time-dev armhf 1.74.0.3ubuntu2 [3168 B] Get:219 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-dev armhf 1.74.0.3ubuntu2 [3376 B] Get:220 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-regex1.74.0 armhf 1.74.0-3ubuntu2 [432 kB] Get:221 http://ftpmaster.internal/ubuntu hirsute/main armhf libicu-dev armhf 67.1-5 [9331 kB] Get:222 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-regex1.74-dev armhf 1.74.0-3ubuntu2 [543 kB] Get:223 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-iostreams1.74.0 armhf 1.74.0-3ubuntu2 [233 kB] Get:224 http://ftpmaster.internal/ubuntu hirsute/universe armhf libboost-iostreams1.74-dev armhf 1.74.0-3ubuntu2 [242 kB] Get:225 http://ftpmaster.internal/ubuntu hirsute/universe armhf libboost-iostreams-dev armhf 1.74.0.3ubuntu2 [3152 B] Get:226 http://ftpmaster.internal/ubuntu hirsute/universe armhf libboost-math1.74.0 armhf 1.74.0-3ubuntu2 [323 kB] Get:227 http://ftpmaster.internal/ubuntu hirsute/universe armhf libboost-math1.74-dev armhf 1.74.0-3ubuntu2 [381 kB] Get:228 http://ftpmaster.internal/ubuntu hirsute/universe armhf libboost-math-dev armhf 1.74.0.3ubuntu2 [3364 B] Get:229 http://ftpmaster.internal/ubuntu hirsute/main armhf libbtf1 armhf 1:5.8.1+dfsg-2 [10.1 kB] Get:230 http://ftpmaster.internal/ubuntu hirsute/main armhf libbz2-dev armhf 1.0.8-4ubuntu2 [29.3 kB] Get:231 http://ftpmaster.internal/ubuntu hirsute/main armhf libcamd2 armhf 1:5.8.1+dfsg-2 [14.3 kB] Get:232 http://ftpmaster.internal/ubuntu hirsute/main armhf libccolamd2 armhf 1:5.8.1+dfsg-2 [15.4 kB] Get:233 http://ftpmaster.internal/ubuntu hirsute/main armhf libcolamd2 armhf 1:5.8.1+dfsg-2 [12.1 kB] Get:234 http://ftpmaster.internal/ubuntu hirsute/main armhf liblapack3 armhf 3.9.0-3ubuntu1 [1637 kB] Get:235 http://ftpmaster.internal/ubuntu hirsute/main armhf libmetis5 armhf 5.1.0.dfsg-7 [132 kB] Get:236 http://ftpmaster.internal/ubuntu hirsute/main armhf libcholmod3 armhf 1:5.8.1+dfsg-2 [205 kB] Get:237 http://ftpmaster.internal/ubuntu hirsute/universe armhf libcommons-parent-java all 43-1 [10.8 kB] Get:238 http://ftpmaster.internal/ubuntu hirsute/universe armhf libcommons-logging-java all 1.2-2 [60.3 kB] Get:239 http://ftpmaster.internal/ubuntu hirsute/main armhf libcurl3-gnutls armhf 7.72.0-1ubuntu1 [204 kB] Get:240 http://ftpmaster.internal/ubuntu hirsute/main armhf libcxsparse3 armhf 1:5.8.1+dfsg-2 [36.6 kB] Get:241 http://ftpmaster.internal/ubuntu hirsute/main armhf libdrm-amdgpu1 armhf 2.4.103-2 [16.8 kB] Get:242 http://ftpmaster.internal/ubuntu hirsute/main armhf libdrm-nouveau2 armhf 2.4.103-2 [14.2 kB] Get:243 http://ftpmaster.internal/ubuntu hirsute/main armhf libdrm-radeon1 armhf 2.4.103-2 [17.3 kB] Get:244 http://ftpmaster.internal/ubuntu hirsute/main armhf libxcb-glx0 armhf 1.14-2.1 [20.4 kB] Get:245 http://ftpmaster.internal/ubuntu hirsute/main armhf libxdamage1 armhf 1:1.1.5-2 [6232 B] Get:246 http://ftpmaster.internal/ubuntu hirsute/main armhf libxfixes3 armhf 1:5.0.3-2 [9340 B] Get:247 http://ftpmaster.internal/ubuntu hirsute/main armhf libxxf86vm1 armhf 1:1.1.4-1build1 [9364 B] Get:248 http://ftpmaster.internal/ubuntu hirsute/main armhf libsensors-config all 1:3.6.0-2ubuntu1 [6092 B] Get:249 http://ftpmaster.internal/ubuntu hirsute/main armhf libsensors5 armhf 1:3.6.0-2ubuntu1 [24.3 kB] Get:250 http://ftpmaster.internal/ubuntu hirsute/main armhf libvulkan1 armhf 1.2.162.0-1 [81.5 kB] Get:251 http://ftpmaster.internal/ubuntu hirsute/main armhf libgl1-mesa-dri armhf 20.3.2-1 [5991 kB] Get:252 http://ftpmaster.internal/ubuntu hirsute/main armhf libglx-mesa0 armhf 20.3.2-1 [121 kB] Get:253 http://ftpmaster.internal/ubuntu hirsute/main armhf libglx0 armhf 1.3.2-1 [30.3 kB] Get:254 http://ftpmaster.internal/ubuntu hirsute/main armhf libgl1 armhf 1.3.2-1 [86.0 kB] Get:255 http://ftpmaster.internal/ubuntu hirsute/main armhf xorg-sgml-doctools all 1:1.11-1.1 [10.9 kB] Get:256 http://ftpmaster.internal/ubuntu hirsute/main armhf x11proto-dev all 2020.1-1 [594 kB] Get:257 http://ftpmaster.internal/ubuntu hirsute/main armhf x11proto-core-dev all 2020.1-1 [2620 B] Get:258 http://ftpmaster.internal/ubuntu hirsute/main armhf libxau-dev armhf 1:1.0.9-0ubuntu1 [8952 B] Get:259 http://ftpmaster.internal/ubuntu hirsute/main armhf libxdmcp-dev armhf 1:1.1.3-0ubuntu1 [24.0 kB] Get:260 http://ftpmaster.internal/ubuntu hirsute/main armhf xtrans-dev all 1.4.0-1 [68.9 kB] Get:261 http://ftpmaster.internal/ubuntu hirsute/main armhf libpthread-stubs0-dev armhf 0.4-1 [5384 B] Get:262 http://ftpmaster.internal/ubuntu hirsute/main armhf libxcb1-dev armhf 1.14-2.1 [79.3 kB] Get:263 http://ftpmaster.internal/ubuntu hirsute/main armhf libx11-dev armhf 2:1.7.0-2 [589 kB] Get:264 http://ftpmaster.internal/ubuntu hirsute/main armhf libglx-dev armhf 1.3.2-1 [14.0 kB] Get:265 http://ftpmaster.internal/ubuntu hirsute/main armhf libgl-dev armhf 1.3.2-1 [97.8 kB] Get:266 http://ftpmaster.internal/ubuntu hirsute/main armhf libegl-dev armhf 1.3.2-1 [17.2 kB] Get:267 http://ftpmaster.internal/ubuntu hirsute/main armhf libfontenc1 armhf 1:1.1.4-1 [11.6 kB] Get:268 http://ftpmaster.internal/ubuntu hirsute/main armhf libgles1 armhf 1.3.2-1 [10.3 kB] Get:269 http://ftpmaster.internal/ubuntu hirsute/main armhf libgles-dev armhf 1.3.2-1 [47.9 kB] Get:270 http://ftpmaster.internal/ubuntu hirsute/universe armhf libglpk40 armhf 5.0-1 [296 kB] Get:271 http://ftpmaster.internal/ubuntu hirsute/main armhf libgmpxx4ldbl armhf 2:6.2.0+dfsg-6ubuntu1 [8028 B] Get:272 http://ftpmaster.internal/ubuntu hirsute/main armhf libgmp-dev armhf 2:6.2.0+dfsg-6ubuntu1 [265 kB] Get:273 http://ftpmaster.internal/ubuntu hirsute/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2ubuntu4 [149 kB] Get:274 http://ftpmaster.internal/ubuntu hirsute/main armhf libgraphblas3 armhf 1:5.8.1+dfsg-2 [4505 kB] Get:275 http://ftpmaster.internal/ubuntu hirsute/main armhf libklu1 armhf 1:5.8.1+dfsg-2 [35.5 kB] Get:276 http://ftpmaster.internal/ubuntu hirsute/main armhf libldl2 armhf 1:5.8.1+dfsg-2 [9900 B] Get:277 http://ftpmaster.internal/ubuntu hirsute/main armhf libmongoose2 armhf 1:5.8.1+dfsg-2 [27.4 kB] Get:278 http://ftpmaster.internal/ubuntu hirsute/main armhf libumfpack5 armhf 1:5.8.1+dfsg-2 [116 kB] Get:279 http://ftpmaster.internal/ubuntu hirsute/main armhf librbio2 armhf 1:5.8.1+dfsg-2 [16.6 kB] Get:280 http://ftpmaster.internal/ubuntu hirsute/main armhf libspqr2 armhf 1:5.8.1+dfsg-2 [53.4 kB] Get:281 http://ftpmaster.internal/ubuntu hirsute/main armhf libsliplu1 armhf 1:5.8.1+dfsg-2 [33.3 kB] Get:282 http://ftpmaster.internal/ubuntu hirsute/main armhf liblapack-dev armhf 3.9.0-3ubuntu1 [1705 kB] Get:283 http://ftpmaster.internal/ubuntu hirsute/main armhf libsuitesparse-dev armhf 1:5.8.1+dfsg-2 [4799 kB] Get:284 http://ftpmaster.internal/ubuntu hirsute/universe armhf libglpk-dev armhf 5.0-1 [367 kB] Get:285 http://ftpmaster.internal/ubuntu hirsute/universe armhf libsz2 armhf 1.0.4-1 [5048 B] Get:286 http://ftpmaster.internal/ubuntu hirsute/universe armhf libhdf5-103-1 armhf 1.10.6+repack-2 [1191 kB] Get:287 http://ftpmaster.internal/ubuntu hirsute/universe armhf libhdf5-cpp-103-1 armhf 1.10.6+repack-2 [103 kB] Get:288 http://ftpmaster.internal/ubuntu hirsute/universe armhf libhdf5-fortran-102 armhf 1.10.6+repack-2 [64.7 kB] Get:289 http://ftpmaster.internal/ubuntu hirsute/universe armhf libhdf5-hl-100 armhf 1.10.6+repack-2 [51.3 kB] Get:290 http://ftpmaster.internal/ubuntu hirsute/universe armhf libhdf5-hl-fortran-100 armhf 1.10.6+repack-2 [22.2 kB] Get:291 http://ftpmaster.internal/ubuntu hirsute/universe armhf libhdf5-hl-cpp-100 armhf 1.10.6+repack-2 [9696 B] Get:292 http://ftpmaster.internal/ubuntu hirsute/main armhf libjpeg-turbo8-dev armhf 2.0.3-0ubuntu2 [203 kB] Get:293 http://ftpmaster.internal/ubuntu hirsute/main armhf libjpeg8-dev armhf 8c-2ubuntu8 [1554 B] Get:294 http://ftpmaster.internal/ubuntu hirsute/main armhf libjpeg-dev 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[25.0 kB] Get:332 http://ftpmaster.internal/ubuntu hirsute/universe armhf libzzip-0-13 armhf 0.13.62-3.2ubuntu1 [22.1 kB] Get:333 http://ftpmaster.internal/ubuntu hirsute/main armhf xfonts-encodings all 1:1.0.5-0ubuntu1 [573 kB] Get:334 http://ftpmaster.internal/ubuntu hirsute/main armhf xfonts-utils armhf 1:7.7+6 [83.0 kB] Get:335 http://ftpmaster.internal/ubuntu hirsute/universe armhf lmodern all 2.004.5-6.1 [9471 kB] Get:336 http://ftpmaster.internal/ubuntu hirsute/main armhf pkg-config armhf 0.29.2-1ubuntu1 [43.4 kB] Get:337 http://ftpmaster.internal/ubuntu hirsute/universe armhf preview-latex-style all 11.91-2ubuntu2 [184 kB] Get:338 http://ftpmaster.internal/ubuntu hirsute/main armhf t1utils armhf 1.41-4 [48.4 kB] Get:339 http://ftpmaster.internal/ubuntu hirsute/universe armhf tex-gyre all 20180621-3.1 [6209 kB] Get:340 http://ftpmaster.internal/ubuntu hirsute/universe armhf texlive-binaries armhf 2020.20200327.54578-6 [7838 kB] Get:341 http://ftpmaster.internal/ubuntu 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configuration, since apt-utils is not installed Fetched 849 MB in 44s (19.1 MB/s) Selecting previously unselected package libpython3.9-minimal:armhf. 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Setting up libboost1.74-dev:armhf (1.74.0-3ubuntu2) ... Setting up bsdextrautils (2.36.1-1ubuntu2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hdf5-helpers (1.10.6+repack-2) ... Setting up hicolor-icon-theme (0.17-2) ... Setting up libicu67:armhf (67.1-5) ... Setting up libdatrie1:armhf (0.2.12-3) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libtexlua53:armhf (2020.20200327.54578-6) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:armhf (2.66.4-1) ... No schema files found: doing nothing. Setting up libboost-iostreams1.74.0:armhf (1.74.0-3ubuntu2) ... Setting up libglvnd0:armhf (1.3.2-1) ... Setting up libijs-0.35:armhf (0.35-15) ... Setting up libtexluajit2:armhf (2020.20200327.54578-6) ... Setting up libdebhelper-perl (13.3.1ubuntu1) ... Setting up libbrotli1:armhf (1.0.9-2build2) ... Setting up libfontbox-java (1:1.8.16-2) ... Setting up liblab-gamut1:armhf (2.42.2-4build2) ... Setting up x11-common (1:7.7+19ubuntu15) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libsensors-config (1:3.6.0-2ubuntu1) ... Setting up libldl2:armhf (1:5.8.1+dfsg-2) ... Setting up libnghttp2-14:armhf (1.42.0-1) ... Setting up libmagic1:armhf (1:5.39-3) ... Setting up gettext-base (0.21-3ubuntu2) ... Setting up xkb-data (2.29-2) ... Setting up libmetis5:armhf (5.1.0.dfsg-7) ... Setting up libzzip-0-13:armhf (0.13.62-3.2ubuntu1) ... Setting up file (1:5.39-3) ... Setting up fonts-urw-base35 (20200910-1) ... Setting up libpthread-stubs0-dev:armhf (0.4-1) ... Setting up libjbig0:armhf (2.1-3.1build1) ... Setting up libpcre2-16-0:armhf (10.35-2ubuntu1) ... Setting up libbtf1:armhf (1:5.8.1+dfsg-2) ... Setting up libaec0:armhf (1.0.4-1) ... Setting up poppler-data (0.4.10-1) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-2ubuntu1) ... Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4) ... Setting up xtrans-dev (1.4.0-1) ... Setting up libfontenc1:armhf (1:1.1.4-1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libz3-4:armhf (4.8.9-1ubuntu1) ... Setting up libblas3:armhf (3.9.0-3ubuntu1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libgmpxx4ldbl:armhf (2:6.2.0+dfsg-6ubuntu1) ... Setting up libuv1:armhf (1.40.0-1) ... Setting up libgles2:armhf (1.3.2-1) ... Setting up qt5-qmake-bin (5.15.2+dfsg-2) ... Setting up libsqlite3-dev:armhf (3.34.0-1) ... Setting up libfreetype6:armhf (2.10.4+dfsg-1) ... Setting up libx11-data (2:1.7.0-2) ... Setting up libjbig2dec0:armhf (0.19-1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2build2) ... Setting up libtinyxml2-8:armhf (8.0.0+dfsg-2) ... Setting up libidn11:armhf (1.33-3) ... Setting up libteckit0:armhf (2.5.8+ds2-5ubuntu2) ... Setting up libpathplan4:armhf (2.42.2-4build2) ... Setting up libapache-pom-java (18-1) ... Setting up libavahi-common-data:armhf (0.8-3ubuntu2) ... Setting up libgles1:armhf (1.3.2-1) ... Setting up libdbus-1-3:armhf (1.12.20-1ubuntu1) ... Setting up libsigsegv2:armhf (2.12-3) ... Setting up xfonts-encodings (1:1.0.5-0ubuntu1) ... Setting up libfribidi0:armhf (1.0.8-2) ... Setting up libboost-regex1.74.0:armhf (1.74.0-3ubuntu2) ... Setting up t1utils (1.41-4) ... Setting up autopoint (0.21-3ubuntu2) ... Setting up libwebp6:armhf (0.6.1-2) ... Setting up icu-devtools (67.1-5) ... Setting up pkg-config (0.29.2-1ubuntu1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up ucf (3.0043) ... Setting up libsensors5:armhf (1:3.6.0-2ubuntu1) ... Setting up libjpeg-turbo8:armhf (2.0.3-0ubuntu2) ... Setting up libltdl7:armhf (2.4.6-15) ... Setting up libfftw3-double3:armhf (3.3.8-2ubuntu6) ... Setting up libglapi-mesa:armhf (20.3.2-1) ... Setting up libkpathsea6:armhf (2020.20200327.54578-6) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-2ubuntu1) ... Setting up libssh-4:armhf (0.9.5-1) ... Setting up libgfortran5:armhf (11-20210123-1ubuntu1) ... Setting up libmtdev1:armhf (1.1.6-1) ... Setting up libvulkan1:armhf (1.2.162.0-1) ... Setting up libroken18-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libjsoncpp24:armhf (1.9.4-4) ... Setting up libboost-math1.74.0:armhf (1.74.0-3ubuntu2) ... Setting up libboost-serialization1.74.0:armhf (1.74.0-3ubuntu2) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2ubuntu4) ... Setting up liblqr-1-0:armhf (0.4.2-2.1) ... Setting up libxshmfence1:armhf (1.3-1) ... Setting up libmime-charset-perl (1.012.2-1) ... Setting up librhash0:armhf (1.4.1-1) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libmpdec3:armhf (2.5.1~rc1-2) ... Setting up libmd4c0:armhf (0.4.7-1) ... Setting up fonts-lmodern (2.004.5-6.1) ... Setting up libopenjp2-7:armhf (2.3.1-1ubuntu5) ... Setting up libsub-override-perl (0.09-2) ... Setting up libharfbuzz0b:armhf (2.6.7-1ubuntu1) ... Setting up libthai-data (0.1.28-3) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up libwildmagic-common (5.17+cleaned1-5ubuntu1) ... Setting up libcxsparse3:armhf (1:5.8.1+dfsg-2) ... Setting up cmake-data (3.18.4-1ubuntu3) ... Setting up libcdt5:armhf (2.42.2-4build2) ... Setting up libcgraph6:armhf (2.42.2-4build2) ... Setting up libboost-dev:armhf (1.74.0.3ubuntu2) ... Setting up libboost-math1.74-dev:armhf (1.74.0-3ubuntu2) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up libboost-date-time1.74.0:armhf (1.74.0-3ubuntu2) ... Setting up libwebpmux3:armhf (0.6.1-2) ... Setting up libbsd0:armhf (0.10.0-1) ... Setting up libdrm-common (2.4.103-2) ... Setting up mailcap (3.68ubuntu1) ... Setting up libelf1:armhf (0.182-3) ... Setting up libevdev2:armhf (1.10.1+dfsg-1) ... Setting up libicu-dev:armhf (67.1-5) ... Setting up libxml2:armhf (2.9.10+dfsg-6.3build1) ... Setting up xdg-utils (1.1.3-2ubuntu2) ... Setting up seqan-dev (1.4.2+dfsg-4) ... Setting up libsuitesparseconfig5:armhf (1:5.8.1+dfsg-2) ... Setting up libgudev-1.0-0:armhf (1:234-1) ... Setting up qtchooser (66-2build1) ... Setting up libblas-dev:armhf (3.9.0-3ubuntu1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up libsz2:armhf (1.0.4-1) ... Setting up libsvm3:armhf (3.24+ds-6) ... Setting up librbio2:armhf (1:5.8.1+dfsg-2) ... Setting up libsynctex2:armhf (2020.20200327.54578-6) ... Setting up libpython3.9-stdlib:armhf (3.9.1-3) ... Setting up libpython3-stdlib:armhf (3.9.0-3ubuntu1) ... Setting up libheimbase1-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libwacom-common (1.7-1) ... Setting up libbz2-dev:armhf (1.0.8-4ubuntu2) ... Setting up libxkbcommon0:armhf (1.0.3-2) ... Setting up libwayland-client0:armhf (1.18.0-2~exp1.1) ... Setting up libjpeg8:armhf (8c-2ubuntu8) ... Setting up libgs9-common (9.53.3~dfsg-6) ... Setting up x11proto-dev (2020.1-1) ... Setting up libfile-stripnondeterminism-perl (1.10.0-1) ... Setting up libamd2:armhf (1:5.8.1+dfsg-2) ... Setting up libpaper1:armhf (1.1.28) ... Creating config file /etc/papersize with new version Setting up libice6:armhf (2:1.0.10-1) ... Setting up libjpeg-turbo8-dev:armhf (2.0.3-0ubuntu2) ... Setting up libxdmcp6:armhf (1:1.1.3-0ubuntu1) ... Setting up liblapack3:armhf (3.9.0-3ubuntu1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libvulkan-dev:armhf (1.2.162.0-1) ... Setting up libxcb1:armhf (1.14-2.1) ... Setting up gettext (0.21-3ubuntu2) ... Setting up libgmp-dev:armhf (2:6.2.0+dfsg-6ubuntu1) ... Setting up libxcb-xfixes0:armhf (1.14-2.1) ... Setting up libpdfbox-java (1:1.8.16-2) ... Setting up mime-support (3.66) ... Setting up libxau-dev:armhf (1:1.0.9-0ubuntu1) ... Setting up libcolamd2:armhf (1:5.8.1+dfsg-2) ... Setting up qt5-qmake:armhf (5.15.2+dfsg-2) ... Setting up libxcb-xinput0:armhf (1.14-2.1) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:armhf (3.4.3-2) ... Setting up libxcb-render0:armhf (1.14-2.1) ... Setting up fontconfig-config (2.13.1-4.2ubuntu2) ... Setting up libboost-math-dev:armhf (1.74.0.3ubuntu2) ... Setting up libxcb-glx0:armhf (1.14-2.1) ... Setting up libasn1-8-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libedit2:armhf (3.1-20191231-2) ... Setting up libcommons-parent-java (43-1) ... Setting up libxcb-keysyms1:armhf (0.4.0-1build1) ... Setting up libaec-dev:armhf (1.0.4-1) ... Setting up libxcb-shape0:armhf (1.14-2.1) ... Setting up libavahi-common3:armhf (0.8-3ubuntu2) ... Setting up libcommons-logging-java (1.2-2) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-render-util0:armhf (0.3.9-1build1) ... Setting up libxcb-shm0:armhf (1.14-2.1) ... Setting up libxcb-icccm4:armhf (0.4.1-1.1) ... Setting up libpaper-utils (1.1.28) ... Setting up xfonts-utils (1:7.7+6) ... Setting up libhcrypto4-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libxcb-util1:armhf (0.4.0-1) ... Setting up libxcb-xkb1:armhf (1.14-2.1) ... Setting up libxcb-image0:armhf (0.4.0-1build1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libsliplu1:armhf (1:5.8.1+dfsg-2) ... Setting up libxcb-present0:armhf (1.14-2.1) ... Setting up tex-common (6.15) ... update-language: texlive-base not installed and configured, doing nothing! Setting up coinor-libcoinutils3v5 (2.11.4+repack1-1) ... Setting up libthai0:armhf (0.1.28-3) ... Setting up libcamd2:armhf (1:5.8.1+dfsg-2) ... Setting up libmongoose2:armhf (1:5.8.1+dfsg-2) ... Setting up libxdmcp-dev:armhf (1:1.1.3-0ubuntu1) ... Setting up libwind0-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libxcb-xinerama0:armhf (1.14-2.1) ... Setting up libllvm11:armhf (1:11.0.1-2) ... Setting up libptexenc1:armhf (2020.20200327.54578-6) ... Setting up libglpk40:armhf (5.0-1) ... Setting up libxcb-sync1:armhf (1.14-2.1) ... Setting up x11proto-core-dev (2020.1-1) ... Setting up shared-mime-info (2.0-1) ... Setting up libxkbcommon-x11-0:armhf (1.0.3-2) ... Setting up libsvm-dev:armhf (3.24+ds-6) ... Setting up liblapack-dev:armhf (3.9.0-3ubuntu1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libeigen3-dev (3.3.9-2) ... Setting up libclang1-11 (1:11.0.1-2) ... Setting up coinor-libcoinutils-dev (2.11.4+repack1-1) ... Setting up libqt5core5a:armhf (5.15.2+dfsg-2) ... Setting up coinor-libosi1v5 (0.108.6+repack1-1) ... Setting up autoconf (2.69-14) ... Setting up libboost-serialization1.74-dev:armhf (1.74.0-3ubuntu2) ... Setting up libxcb-dri2-0:armhf (1.14-2.1) ... Setting up dh-strip-nondeterminism (1.10.0-1) ... Setting up libgvpr2:armhf (2.42.2-4build2) ... Setting up x11proto-xext-dev (2020.1-1) ... Setting up libdrm2:armhf (2.4.103-2) ... Setting up libhdf5-103-1:armhf (1.10.6+repack-2) ... Setting up dwz (0.13+20210118-1) ... Setting up libboost-regex1.74-dev:armhf (1.74.0-3ubuntu2) ... Setting up groff-base (1.22.4-5) ... Setting up libklu1:armhf (1:5.8.1+dfsg-2) ... Setting up libqt5dbus5:armhf (5.15.2+dfsg-2) ... Setting up libccolamd2:armhf (1:5.8.1+dfsg-2) ... Setting up libxcb-randr0:armhf (1.14-2.1) ... Setting up lmodern (2.004.5-6.1) ... Setting up libhdf5-cpp-103-1:armhf (1.10.6+repack-2) ... Setting up libx11-6:armhf (2:1.7.0-2) ... Setting up libtiff5:armhf (4.1.0+git201212-1ubuntu1) ... Setting up libfontconfig1:armhf (2.13.1-4.2ubuntu2) ... Setting up libjpeg8-dev:armhf (8c-2ubuntu8) ... Setting up libqt5test5:armhf (5.15.2+dfsg-2) ... Setting up libwacom2:armhf (1.7-1) ... Setting up libsm6:armhf (2:1.2.3-1) ... Setting up libqt5concurrent5:armhf (5.15.2+dfsg-2) ... Setting up tex-gyre (20180621-3.1) ... Setting up libavahi-client3:armhf (0.8-3ubuntu2) ... Setting up libcholmod3:armhf (1:5.8.1+dfsg-2) ... Setting up python3.9 (3.9.1-3) ... Setting up libdrm-amdgpu1:armhf (2.4.103-2) ... Setting up libhdf5-hl-100:armhf (1.10.6+repack-2) ... Setting up automake (1:1.16.3-2ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:armhf (1.14-2.1) ... Setting up libspqr2:armhf (1:5.8.1+dfsg-2) ... Setting up libx11-xcb1:armhf (2:1.7.0-2) ... Setting up fontconfig (2.13.1-4.2ubuntu2) ... Regenerating fonts cache... done. Setting up libdrm-nouveau2:armhf (2.4.103-2) ... Setting up libxdamage1:armhf (1:1.1.5-2) ... Setting up libxcb1-dev:armhf (1.14-2.1) ... Setting up libxpm4:armhf (1:3.5.12-1) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libgbm1:armhf (20.3.2-1) ... Setting up libsombok3:armhf (2.4.0-2) ... Setting up libdrm-radeon1:armhf (2.4.103-2) ... Setting up libhx509-5-heimdal:armhf (7.7.0+dfsg-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up preview-latex-style (11.91-2ubuntu2) ... Setting up coinor-libosi-dev (0.108.6+repack1-1) ... Setting up libpango-1.0-0:armhf (1.46.2-3) ... Setting up libgl1-mesa-dri:armhf (20.3.2-1) ... Setting up libjpeg-dev:armhf (8c-2ubuntu8) ... Setting up libx11-dev:armhf (2:1.7.0-2) ... Setting up libxext6:armhf (2:1.3.4-0ubuntu1) ... Setting up python3 (3.9.0-3ubuntu1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libcairo2:armhf (1.16.0-5) ... Setting up libqt5network5:armhf (5.15.2+dfsg-2) ... Setting up libxxf86vm1:armhf (1:1.1.4-1build1) ... Setting up libinput-bin (1.16.4-1ubuntu2) ... Setting up libclang-cpp11 (1:11.0.1-2) ... Setting up libqt5sql5:armhf (5.15.2+dfsg-2) ... Setting up libboost-iostreams1.74-dev:armhf (1.74.0-3ubuntu2) ... Setting up libboost-date-time1.74-dev:armhf (1.74.0-3ubuntu2) ... Setting up qtbase5-dev-tools (5.15.2+dfsg-2) ... Setting up libmagickcore-6.q16-6:armhf (8:6.9.10.23+dfsg-2.1ubuntu15) ... Setting up libqt5xml5:armhf (5.15.2+dfsg-2) ... Setting up libegl-mesa0:armhf (20.3.2-1) ... Setting up libhdf5-hl-cpp-100:armhf (1.10.6+repack-2) ... Setting up doxygen (1.8.20-6) ... Setting up libumfpack5:armhf (1:5.8.1+dfsg-2) ... Setting up libxfixes3:armhf (1:5.0.3-2) ... Setting up coinor-libclp1 (1.17.5+repack1-1) ... Setting up libunicode-linebreak-perl (0.0.20190101-1build2) ... Setting up libgd3:armhf (2.3.0-2) ... Setting up coinor-libclp-dev (1.17.5+repack1-1) ... Setting up libhdf5-fortran-102:armhf (1.10.6+repack-2) ... Setting up libboost-date-time-dev:armhf (1.74.0.3ubuntu2) ... Setting up libxt6:armhf (1:1.2.0-1) ... Setting up libxext-dev:armhf (2:1.3.4-0ubuntu1) ... Setting up libcups2:armhf (2.3.3op1-5ubuntu1) ... Setting up libegl1:armhf (1.3.2-1) ... Setting up libhdf5-hl-fortran-100:armhf (1.10.6+repack-2) ... Setting up libmagickwand-6.q16-6:armhf (8:6.9.10.23+dfsg-2.1ubuntu15) ... Setting up coinor-libcgl1 (0.60.3+repack1-2) ... Setting up libpangoft2-1.0-0:armhf (1.46.2-3) ... Setting up libpangocairo-1.0-0:armhf (1.46.2-3) ... Setting up libkrb5-26-heimdal:armhf (7.7.0+dfsg-2) ... Setting up coinor-libcgl-dev (0.60.3+repack1-2) ... Setting up python3-pkg-resources (51.1.0-1) ... Setting up libinput10:armhf (1.16.4-1ubuntu2) ... Setting up coinor-libcbc3:armhf (2.10.5+ds1-3) ... Setting up libxmu6:armhf (2:1.1.3-0ubuntu1) ... Setting up libglx-mesa0:armhf (20.3.2-1) ... Setting up libgs9:armhf (9.53.3~dfsg-6) ... Setting up libxi6:armhf (2:1.7.10-1) ... Setting up libglx0:armhf (1.3.2-1) ... Setting up libsuitesparse-dev:armhf (1:5.8.1+dfsg-2) ... Setting up libqt5gui5:armhf (5.15.2+dfsg-2) ... Setting up libqt5widgets5:armhf (5.15.2+dfsg-2) ... Setting up libxaw7:armhf (2:1.0.13-1.1) ... Setting up libboost-iostreams-dev:armhf (1.74.0.3ubuntu2) ... Setting up ghostscript (9.53.3~dfsg-6) ... Setting up libheimntlm0-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libqt5printsupport5:armhf (5.15.2+dfsg-2) ... Setting up python3-pygments (2.7.1+dfsg-1) ... Setting up libgl1:armhf (1.3.2-1) ... Setting up libgssapi3-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libglpk-dev:armhf (5.0-1) ... Setting up libhdf5-dev (1.10.6+repack-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libgvc6 (2.42.2-4build2) ... Setting up cppcheck (2.3-1) ... Setting up imagemagick-6.q16 (8:6.9.10.23+dfsg-2.1ubuntu15) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up libqt5opengl5:armhf (5.15.2+dfsg-2) ... Setting up texlive-binaries (2020.20200327.54578-6) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libglx-dev:armhf (1.3.2-1) ... Setting up coinor-libcbc-dev:armhf (2.10.5+ds1-3) ... Setting up texlive-base (2020.20200925-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libgl-dev:armhf (1.3.2-1) ... Setting up graphviz (2.42.2-4build2) ... Setting up libegl-dev:armhf (1.3.2-1) ... Setting up texlive-luatex (2020.20200925-1) ... Setting up libqt5svg5:armhf (5.15.2-2) ... Setting up texlive-plain-generic (2020.20200925-1) ... Setting up libwildmagic5:armhf (5.17+cleaned1-5ubuntu1) ... Setting up libldap-2.4-2:armhf (2.4.56+dfsg-1ubuntu1) ... Setting up libcurl3-gnutls:armhf (7.72.0-1ubuntu1) ... Setting up texlive-font-utils (2020.20200925-1) ... Setting up libqt5svg5-dev:armhf (5.15.2-2) ... Setting up texlive-latex-base (2020.20200925-1) ... Setting up texlive-extra-utils (2020.20200925-1) ... Setting up texlive-fonts-extra (2020.20200925-1) ... Setting up texlive-latex-recommended (2020.20200925-1) ... Setting up texlive-pictures (2020.20200925-1) ... Setting up imagemagick (8:6.9.10.23+dfsg-2.1ubuntu15) ... Setting up texlive-fonts-recommended (2020.20200925-1) ... Setting up libcurl4:armhf (7.72.0-1ubuntu1) ... Setting up libgles-dev:armhf (1.3.2-1) ... Setting up libxerces-c3.2:armhf (3.2.3+debian-3) ... Setting up libwildmagic-dev:armhf (5.17+cleaned1-5ubuntu1) ... Setting up texlive-latex-extra (2020.20200925-1) ... Setting up libxerces-c-dev:armhf (3.2.3+debian-3) ... Setting up qtbase5-dev:armhf (5.15.2+dfsg-2) ... Setting up cmake (3.18.4-1ubuntu3) ... Setting up libqt5opengl5-dev:armhf (5.15.2+dfsg-2) ... Setting up debhelper (13.3.1ubuntu1) ... Setting up dh-exec (0.23.2) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-openms-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu6) ... Processing triggers for tex-common (6.15) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-134-generic arm64 (armv7l) Toolchain package versions: binutils_2.35.50.20210106-1ubuntu2 dpkg-dev_1.20.7.1ubuntu1 g++-10_10.2.1-6ubuntu1 gcc-10_10.2.1-6ubuntu1 libc6-dev_2.32-0ubuntu6 libstdc++-10-dev_10.2.1-6ubuntu1 libstdc++6_11-20210123-1ubuntu1 linux-libc-dev_5.8.0-36.40+21.04.1 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1build1 apt_2.1.18 autoconf_2.69-14 automake_1:1.16.3-2ubuntu1 autopoint_0.21-3ubuntu2 autotools-dev_20180224.1+nmu1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.1-1ubuntu1 binutils_2.35.50.20210106-1ubuntu2 binutils-arm-linux-gnueabihf_2.35.50.20210106-1ubuntu2 binutils-common_2.35.50.20210106-1ubuntu2 bsdextrautils_2.36.1-1ubuntu2 bsdutils_1:2.36.1-1ubuntu2 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 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libltdl7_2.4.6-15 liblz4-1_1.9.3-0ubuntu1 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmagickcore-6.q16-6_8:6.9.10.23+dfsg-2.1ubuntu15 libmagickwand-6.q16-6_8:6.9.10.23+dfsg-2.1ubuntu15 libmd4c0_0.4.7-1 libmetis5_5.1.0.dfsg-7 libmime-charset-perl_1.012.2-1 libmongoose2_1:5.8.1+dfsg-2 libmount1_2.36.1-1ubuntu2 libmpc3_1.2.0-1 libmpdec3_2.5.1~rc1-2 libmpfr6_4.1.0-3 libmtdev1_1.1.6-1 libncurses6_6.2+20201114-2 libncursesw6_6.2+20201114-2 libnettle8_3.6-2 libnghttp2-14_1.42.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libopenjp2-7_2.3.1-1ubuntu5 libp11-kit0_0.23.22-1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpango-1.0-0_1.46.2-3 libpangocairo-1.0-0_1.46.2-3 libpangoft2-1.0-0_1.46.2-3 libpaper-utils_1.1.28 libpaper1_1.1.28 libpathplan4_2.42.2-4build2 libpcre2-16-0_10.35-2ubuntu1 libpcre2-8-0_10.35-2ubuntu1 libpcre3_2:8.39-13 libpdfbox-java_1:1.8.16-2 libperl5.30_5.30.3-4 libperl5.32_5.32.0-6 libpipeline1_1.5.3-1 libpixman-1-0_0.40.0-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5ubuntu2 libpsl5_0.21.0-1.1ubuntu1 libptexenc1_2020.20200327.54578-6 libpthread-stubs0-dev_0.4-1 libpython3-stdlib_3.9.0-3ubuntu1 libpython3.9-minimal_3.9.1-3 libpython3.9-stdlib_3.9.1-3 libqt5concurrent5_5.15.2+dfsg-2 libqt5core5a_5.15.2+dfsg-2 libqt5dbus5_5.15.2+dfsg-2 libqt5gui5_5.15.2+dfsg-2 libqt5network5_5.15.2+dfsg-2 libqt5opengl5_5.15.2+dfsg-2 libqt5opengl5-dev_5.15.2+dfsg-2 libqt5printsupport5_5.15.2+dfsg-2 libqt5sql5_5.15.2+dfsg-2 libqt5svg5_5.15.2-2 libqt5svg5-dev_5.15.2-2 libqt5test5_5.15.2+dfsg-2 libqt5widgets5_5.15.2+dfsg-2 libqt5xml5_5.15.2+dfsg-2 librbio2_1:5.8.1+dfsg-2 libreadline8_8.1-1 librhash0_1.4.1-1 libroken18-heimdal_7.7.0+dfsg-2 librtmp1_2.4+20151223.gitfa8646d.1-2build2 libsasl2-2_2.1.27+dfsg-2ubuntu1 libsasl2-modules-db_2.1.27+dfsg-2ubuntu1 libseccomp2_2.4.3-1ubuntu6 libselinux1_3.1-2build2 libsemanage-common_3.1-1build2 libsemanage1_3.1-1build2 libsensors-config_1:3.6.0-2ubuntu1 libsensors5_1:3.6.0-2ubuntu1 libsepol1_3.1-1 libsigsegv2_2.12-3 libsliplu1_1:5.8.1+dfsg-2 libsm6_2:1.2.3-1 libsmartcols1_2.36.1-1ubuntu2 libsombok3_2.4.0-2 libspqr2_1:5.8.1+dfsg-2 libsqlite3-0_3.34.0-1 libsqlite3-dev_3.34.0-1 libss2_1.45.6-1ubuntu1 libssh-4_0.9.5-1 libssl1.1_1.1.1f-1ubuntu5 libstdc++-10-dev_10.2.1-6ubuntu1 libstdc++6_11-20210123-1ubuntu1 libsub-override-perl_0.09-2 libsuitesparse-dev_1:5.8.1+dfsg-2 libsuitesparseconfig5_1:5.8.1+dfsg-2 libsvm-dev_3.24+ds-6 libsvm3_3.24+ds-6 libsynctex2_2020.20200327.54578-6 libsystemd0_247.1-4ubuntu1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libteckit0_2.5.8+ds2-5ubuntu2 libtexlua53_2020.20200327.54578-6 libtexluajit2_2020.20200327.54578-6 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git201212-1ubuntu1 libtinfo6_6.2+20201114-2 libtinyxml2-8_8.0.0+dfsg-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libubsan1_11-20210123-1ubuntu1 libuchardet0_0.0.7-1 libudev1_247.1-4ubuntu1 libumfpack5_1:5.8.1+dfsg-2 libunicode-linebreak-perl_0.0.20190101-1build2 libunistring2_0.9.10-4 libuuid1_2.36.1-1ubuntu2 libuv1_1.40.0-1 libvulkan-dev_1.2.162.0-1 libvulkan1_1.2.162.0-1 libwacom-common_1.7-1 libwacom2_1.7-1 libwayland-client0_1.18.0-2~exp1.1 libwayland-server0_1.18.0-2~exp1.1 libwebp6_0.6.1-2 libwebpmux3_0.6.1-2 libwildmagic-common_5.17+cleaned1-5ubuntu1 libwildmagic-dev_5.17+cleaned1-5ubuntu1 libwildmagic5_5.17+cleaned1-5ubuntu1 libwind0-heimdal_7.7.0+dfsg-2 libx11-6_2:1.7.0-2 libx11-data_2:1.7.0-2 libx11-dev_2:1.7.0-2 libx11-xcb1_2:1.7.0-2 libxapian30_1.4.18-1 libxau-dev_1:1.0.9-0ubuntu1 libxau6_1:1.0.9-0ubuntu1 libxaw7_2:1.0.13-1.1 libxcb-dri2-0_1.14-2.1 libxcb-dri3-0_1.14-2.1 libxcb-glx0_1.14-2.1 libxcb-icccm4_0.4.1-1.1 libxcb-image0_0.4.0-1build1 libxcb-keysyms1_0.4.0-1build1 libxcb-present0_1.14-2.1 libxcb-randr0_1.14-2.1 libxcb-render-util0_0.3.9-1build1 libxcb-render0_1.14-2.1 libxcb-shape0_1.14-2.1 libxcb-shm0_1.14-2.1 libxcb-sync1_1.14-2.1 libxcb-util1_0.4.0-1 libxcb-xfixes0_1.14-2.1 libxcb-xinerama0_1.14-2.1 libxcb-xinput0_1.14-2.1 libxcb-xkb1_1.14-2.1 libxcb1_1.14-2.1 libxcb1-dev_1.14-2.1 libxdamage1_1:1.1.5-2 libxdmcp-dev_1:1.1.3-0ubuntu1 libxdmcp6_1:1.1.3-0ubuntu1 libxerces-c-dev_3.2.3+debian-3 libxerces-c3.2_3.2.3+debian-3 libxext-dev_2:1.3.4-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxfixes3_1:5.0.3-2 libxi6_2:1.7.10-1 libxkbcommon-x11-0_1.0.3-2 libxkbcommon0_1.0.3-2 libxml2_2.9.10+dfsg-6.3build1 libxmu6_2:1.1.3-0ubuntu1 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxt6_1:1.2.0-1 libxxf86vm1_1:1.1.4-1build1 libxxhash0_0.8.0-2 libz3-4_4.8.9-1ubuntu1 libzstd1_1.4.8+dfsg-1 libzzip-0-13_0.13.62-3.2ubuntu1 linux-libc-dev_5.8.0-36.40+21.04.1 lmodern_2.004.5-6.1 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu8 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-5 mailcap_3.68ubuntu1 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_4.0.0 mime-support_3.66 mount_2.36.1-1ubuntu2 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 openssl_1.1.1f-1ubuntu5 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu8 patch_2.7.6-7 perl_5.32.0-6 perl-base_5.32.0-6 perl-modules-5.30_5.30.3-4 perl-modules-5.32_5.32.0-6 pinentry-curses_1.1.0-4build1 pkg-config_0.29.2-1ubuntu1 pkgbinarymangler_146 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3 poppler-data_0.4.10-1 preview-latex-style_11.91-2ubuntu2 procps_2:3.3.16-5ubuntu2 python3_3.9.0-3ubuntu1 python3-minimal_3.9.0-3ubuntu1 python3-pkg-resources_51.1.0-1 python3-pygments_2.7.1+dfsg-1 python3.9_3.9.1-3 python3.9-minimal_3.9.1-3 qt5-qmake_5.15.2+dfsg-2 qt5-qmake-bin_5.15.2+dfsg-2 qtbase5-dev_5.15.2+dfsg-2 qtbase5-dev-tools_5.15.2+dfsg-2 qtchooser_66-2build1 readline-common_8.1-1 rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-openms-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.14 seqan-dev_1.4.2+dfsg-4 shared-mime-info_2.0-1 systemd_247.1-4ubuntu1 systemd-sysv_247.1-4ubuntu1 systemd-timesyncd_247.1-4ubuntu1 sysvinit-utils_2.96-5ubuntu1 t1utils_1.41-4 tar_1.32+dfsg-1 tex-common_6.15 tex-gyre_20180621-3.1 texlive-base_2020.20200925-1 texlive-binaries_2020.20200327.54578-6 texlive-extra-utils_2020.20200925-1 texlive-font-utils_2020.20200925-1 texlive-fonts-extra_2020.20200925-1 texlive-fonts-recommended_2020.20200925-1 texlive-latex-base_2020.20200925-1 texlive-latex-extra_2020.20200925-1 texlive-latex-recommended_2020.20200925-1 texlive-luatex_2020.20200925-1 texlive-pictures_2020.20200925-1 texlive-plain-generic_2020.20200925-1 tzdata_2020f-1ubuntu2 ubuntu-keyring_2020.06.17.1 ucf_3.0043 util-linux_2.36.1-1ubuntu2 x11-common_1:7.7+19ubuntu15 x11proto-core-dev_2020.1-1 x11proto-dev_2020.1-1 x11proto-xext-dev_2020.1-1 xdg-utils_1.1.3-2ubuntu2 xfonts-encodings_1:1.0.5-0ubuntu1 xfonts-utils_1:7.7+6 xkb-data_2.29-2 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Jul 28 19:22:32 2020 UTC gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D gpgv: issuer "steve.langasek@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./openms_2.5.0+cleaned1-5build1.dsc dpkg-source: info: extracting openms in /<>/openms-2.5.0+cleaned1 dpkg-source: info: unpacking openms_2.5.0+cleaned1.orig.tar.gz dpkg-source: info: unpacking openms_2.5.0+cleaned1-5build1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying sonameAndNameLinkSkipCmakeBuildSystem.patch dpkg-source: info: applying installDirsSettingsCmakeBuildSystem.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20662121 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20662121 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20662121 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package openms dpkg-buildpackage: info: source version 2.5.0+cleaned1-5build1 dpkg-buildpackage: info: source distribution groovy dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_auto_clean -O--buildsystem=cmake -O--no-parallel dh_autoreconf_clean -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_clean make[1]: Entering directory '/<>/openms-2.5.0+cleaned1' entering the override_dh_clean target # Remove the generated xpm icon files: rm -f debian/TOPPAS.xpm rm -f debian/TOPPView.xpm # Remove the generated topp.1 man page: rm -f debian/topp.1 dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libopenms2.5.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars debian/files rm -fr -- debian/libopenms2.5.0/ debian/tmp/ debian/libopenms-dev/ debian/topp/ debian/openms-common/ debian/openms-doc/ debian/openms/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/<>/openms-2.5.0+cleaned1' debian/rules build-arch dh build-arch --buildsystem=cmake --no-parallel dh_testdir -a -O--buildsystem=cmake -O--no-parallel dh_update_autotools_config -a -O--buildsystem=cmake -O--no-parallel dh_autoreconf -a -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/openms-2.5.0+cleaned1' dh_auto_configure -- \ -DDEBIAN_BUILD=ON \ -DHAS_XSERVER=OFF \ -DCMAKE_FIND_LIBRARY_SUFFIXES=".so" \ -DCMAKE_SKIP_RPATH=ON \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DOPENMS_CONTRIB_LIBS="/usr/lib;/usr/lib/arm-linux-gnueabihf" \ -DCMAKE_BUILD_TYPE=release \ -DBOOST_USE_STATIC=OFF \ -DENABLE_STYLE_TESTING=OFF \ -DENABLE_TOPP_TESTING=OFF \ -DENABLE_CLASS_TESTING=OFF \ -DENABLE_PIPELINE_TESTING=OFF \ -DENABLE_TUTORIALS=ON install -d obj-arm-linux-gnueabihf cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DDEBIAN_BUILD=ON -DHAS_XSERVER=OFF -DCMAKE_FIND_LIBRARY_SUFFIXES=.so -DCMAKE_SKIP_RPATH=ON -DCMAKE_INSTALL_PREFIX=/usr -DOPENMS_CONTRIB_LIBS=/usr/lib\;/usr/lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=release -DBOOST_USE_STATIC=OFF -DENABLE_STYLE_TESTING=OFF -DENABLE_TOPP_TESTING=OFF -DENABLE_CLASS_TESTING=OFF -DENABLE_PIPELINE_TESTING=OFF -DENABLE_TUTORIALS=ON .. -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Building OpenMS 2.5.0 -- - Repository revision GIT-NOTFOUND -- - Repository branch GIT-NOTFOUND -- - Repository last change date GIT-NOTFOUND -- [CMake is tracking Git commits and branching ('-D GIT_TRACKING=On')] -- OpenMP support requested: ON -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Architecture: 32 bit -- Performing Test WITH_FPIC -- Performing Test WITH_FPIC - Success -- Compiler checks for conversion: OFF -- Collection of usage statistics and update notifications enabled. -- If you don't want this information to be transmitted to our update sever, you can: -- - Switch the build variable ENABLE_UPDATE_CHECK to OFF to remove the functionality at build time. -- - Set the environment variable OPENMS_DISABLE_UPDATE_CHECK to disable the functionality at runtime. -- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.48.0") -- Adding library OpenSwathAlgo -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Adding library OpenSwathAlgo - SUCCESS -- Found XercesC: /usr/lib/arm-linux-gnueabihf/libxerces-c.so (found version "3.2.3") CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:1187 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/share/cmake-3.18/Modules/FindBoost.cmake:1311 (_Boost_COMPONENT_DEPENDENCIES) /usr/share/cmake-3.18/Modules/FindBoost.cmake:1919 (_Boost_MISSING_DEPENDENCIES) cmake/build_system_macros.cmake:90 (find_package) src/openms/cmake_findExternalLibs.cmake:60 (find_boost) src/openms/CMakeLists.txt:70 (include) CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:1187 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/share/cmake-3.18/Modules/FindBoost.cmake:1311 (_Boost_COMPONENT_DEPENDENCIES) /usr/share/cmake-3.18/Modules/FindBoost.cmake:1919 (_Boost_MISSING_DEPENDENCIES) cmake/build_system_macros.cmake:90 (find_package) src/openms/cmake_findExternalLibs.cmake:60 (find_boost) src/openms/CMakeLists.txt:70 (include) CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:1187 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/share/cmake-3.18/Modules/FindBoost.cmake:1311 (_Boost_COMPONENT_DEPENDENCIES) /usr/share/cmake-3.18/Modules/FindBoost.cmake:1919 (_Boost_MISSING_DEPENDENCIES) cmake/build_system_macros.cmake:90 (find_package) src/openms/cmake_findExternalLibs.cmake:60 (find_boost) src/openms/CMakeLists.txt:70 (include) CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:1187 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/share/cmake-3.18/Modules/FindBoost.cmake:1311 (_Boost_COMPONENT_DEPENDENCIES) /usr/share/cmake-3.18/Modules/FindBoost.cmake:1919 (_Boost_MISSING_DEPENDENCIES) cmake/build_system_macros.cmake:90 (find_package) src/openms/cmake_findExternalLibs.cmake:60 (find_boost) src/openms/CMakeLists.txt:70 (include) -- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex -- Found Boost version 1.74.0 -- Found SEQAN: /usr/include (found suitable version "1.4.2", minimum required is "1.4.0") -- Found LIBSVM: /usr/lib/arm-linux-gnueabihf/libsvm.so (found suitable version "3.2.4", minimum required is "2.91") -- Found COIN: /usr/include -- Found GLPK: /usr/lib/arm-linux-gnueabihf/libglpk.so -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11") -- Found BZip2: /usr/lib/arm-linux-gnueabihf/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit in /usr/lib/arm-linux-gnueabihf/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib/arm-linux-gnueabihf/libbz2.so - found -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.3.4") -- Found WM5: /usr/include/libwildmagic CMake Warning (dev) at /usr/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:273 (message): The package name passed to `find_package_handle_standard_args` (SQLite) does not match the name of the calling package (SQLITE). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/modules/FindSQLITE.cmake:201 (find_package_handle_standard_args) src/openms/cmake_findExternalLibs.cmake:134 (find_package) src/openms/CMakeLists.txt:70 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found SQLite: /usr/include (found version "3.34.0") -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so;/usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.6") found components: C CXX HL -- Found Qt 5.15.2 -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Info: CF_OPENMS_DATA_PATH: -- Info: CF_OPENMS_DOC_PATH: -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Adding library OpenMS -- Adding library OpenMS - SUCCESS -- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.48.0") -- Adding library SuperHirn -- Adding library SuperHirn - SUCCESS -- Adding library OpenMS_GUI -- Adding library OpenMS_GUI - SUCCESS -- No resource file (/<>/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded. -- No resource file (/<>/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded. -- No resource file (/<>/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded. -- Documentation is built (-D ENABLE_DOCS=On). -- Found Doxygen: /usr/bin/doxygen (found version "1.8.20") found components: doxygen dot -- Enabled tutorials (-D ENABLE_TUTORIALS=On). -- -- ----------------------------------------------------------------- -- -- You have successfully configured OpenMS. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done -- Generating done -- Build files have been written to: /<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf # Prepare the xpm-formatted pixmaps for the Debian menu system. # Setting imagemagick to Build-Depends, for use of convert. convert src/openms_gui/source/VISUAL/ICONS/TOPPAS.png -resize 32x32 debian/TOPPAS.xpm convert src/openms_gui/source/VISUAL/ICONS/TOPPView.png -resize 32x32 debian/TOPPView.xpm make[1]: Leaving directory '/<>/openms-2.5.0+cleaned1' rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.5.0.debhelper.log debian/topp.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/<>/openms-2.5.0+cleaned1' # Build the libs and executable binaries # Build the documentation, which needs a running XWindow server. We # thus use the doc_minimal target. # # ATTENTION, as of 20200514, the pdfLatex compilation fails with error # ! LaTeX Error: Command `\Bbbk' already defined. # This is why we commented out the doc_tutorials target below. # See also the override_dh_auto_configure target above, that disables # that specific doc_tutorials target. VERBOSE=1 \ dh_auto_build -- \ OpenMS GUI TOPP UTILS cd obj-arm-linux-gnueabihf && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1 make[2]: Entering directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<>/openms-2.5.0+cleaned1 -B/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 OpenMS make[3]: Entering directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<>/openms-2.5.0+cleaned1 -B/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/CMakeFiles 54 make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all make[4]: Entering directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' cd /<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openms-2.5.0+cleaned1 /<>/openms-2.5.0+cleaned1/src/openswathalgo /<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf /<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo /<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color= Dependee "/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake" is newer than depender "/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend.internal". Dependee "/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend.internal". Scanning dependencies of target OpenSwathAlgo make[5]: Leaving directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o cd /<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/<>/openms-2.5.0+cleaned1/src/openswathalgo/include -I/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/include -I/<>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/<>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/<>/openms-2.5.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -c /<>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp In file included from /usr/include/c++/10/vector:72, from /usr/include/boost/math/special_functions/math_fwd.hpp:26, from /usr/include/boost/math/special_functions/fpclassify.hpp:19, from /<>/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:38, from /<>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp:35: /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from /usr/include/boost/math/special_functions/math_fwd.hpp:26, from /usr/include/boost/math/special_functions/fpclassify.hpp:19, from /<>/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:38, from /<>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp:35: /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void OpenSwath::MRMScoring::calcLibraryScore(OpenSwath::IMRMFeature*, const std::vector&, double&, double&, double&, double&, double&, double&)’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcMIScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcMIPrecursorScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcMIPrecursorContrastScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcMIPrecursorCombinedScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcXcorrShapeScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcXcorrPrecursorShapeScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcXcorrPrecursorCombinedShapeScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcXcorrPrecursorContrastShapeScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function ‘double OpenSwath::MRMScoring::calcXcorrContrastShapeScore()’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o cd /<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/<>/openms-2.5.0+cleaned1/src/openswathalgo/include -I/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/include -I/<>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/<>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/<>/openms-2.5.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /<>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp In file included from /<>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp:42: /<>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c: In function ‘void* checkedCalloc(size_t, size_t)’: /<>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:61: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /<>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:80: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /<>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp: In function ‘std::vector OpenSwath::Scoring::computeRank(const std::vector&)’: /<>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp:268:12: error: ‘sort’ is not a member of ‘std’; did you mean ‘sqrt’? 268 | std::sort(v_sort.begin(), v_sort.end()); | ^~~~ | sqrt make[5]: *** [src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make:98: src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o] Error 1 make[5]: Leaving directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' make[4]: *** [CMakeFiles/Makefile2:1696: src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/all] Error 2 make[4]: Leaving directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:1731: src/openms/CMakeFiles/OpenMS.dir/rule] Error 2 make[3]: Leaving directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' make[2]: *** [Makefile:587: OpenMS] Error 2 make[2]: Leaving directory '/<>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf' dh_auto_build: error: cd obj-arm-linux-gnueabihf && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1 returned exit code 2 make[1]: *** [debian/rules:94: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<>/openms-2.5.0+cleaned1' make: *** [debian/rules:43: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2021-01-26T22:36:20Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: n/a Build-Time: 55 Distribution: hirsute Fail-Stage: build Host Architecture: armhf Install-Time: 454 Job: openms_2.5.0+cleaned1-5build1.dsc Machine Architecture: arm64 Package: openms Package-Time: 531 Source-Version: 2.5.0+cleaned1-5build1 Space: n/a Status: attempted Version: 2.5.0+cleaned1-5build1 -------------------------------------------------------------------------------- Finished at 2021-01-26T22:36:20Z Build needed 00:08:51, no disk space E: Build failure (dpkg-buildpackage died) RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20662121 Scanning for processes to kill in build PACKAGEBUILD-20662121