https://launchpad.net/ubuntu/+archive/test-rebuild-20210927-impish/+build/22133205 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-023 4.15.0-159-generic #167-Ubuntu SMP Mon Sep 20 23:06:52 UTC 2021 aarch64 Buildd toolchain package versions: launchpad-buildd_202~502~ubuntu18.04.1 python3-lpbuildd_202~502~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.9 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 5 Oct 20:47:54 ntpdate[1686]: adjust time server 10.211.37.1 offset 0.001937 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=impish --arch=armhf PACKAGEBUILD-22133205 --image-type chroot /home/buildd/filecache-default/97616dc8f1f80df2f95e447b7ddaa1d0ac1b5f62 Creating target for build PACKAGEBUILD-22133205 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=impish --arch=armhf PACKAGEBUILD-22133205 Starting target for build PACKAGEBUILD-22133205 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=impish --arch=armhf PACKAGEBUILD-22133205 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish main' 'deb http://ftpmaster.internal/ubuntu impish main universe' Overriding sources.list in build-PACKAGEBUILD-22133205 RUN: /usr/share/launchpad-buildd/bin/in-target add-trusted-keys --backend=chroot --series=impish --arch=armhf PACKAGEBUILD-22133205 Adding trusted keys to build-PACKAGEBUILD-22133205 Warning: apt-key is deprecated. Manage keyring files in trusted.gpg.d instead (see apt-key(8)). OK Warning: apt-key is deprecated. Manage keyring files in trusted.gpg.d instead (see apt-key(8)). /etc/apt/trusted.gpg -------------------- pub rsa1024 2009-10-22 [SC] 60C3 1780 3A41 BA51 845E 371A 1E93 77A2 BA9E F27F uid [ unknown] Launchpad Toolchain builds /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-cdimage.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 8439 38DF 228D 22F7 B374 2BC0 D94A A3F0 EFE2 1092 uid [ unknown] Ubuntu CD Image Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2018-archive.gpg ------------------------------------------------------ pub rsa4096 2018-09-17 [SC] F6EC B376 2474 EDA9 D21B 7022 8719 20D1 991B C93C uid [ unknown] Ubuntu Archive Automatic Signing Key (2018) RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=impish --arch=armhf PACKAGEBUILD-22133205 Updating target for build PACKAGEBUILD-22133205 Get:1 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish InRelease [17.5 kB] Get:2 http://ftpmaster.internal/ubuntu impish InRelease [269 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish/main armhf Packages [10.7 kB] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish/main Translation-en [10.5 kB] Get:5 http://ftpmaster.internal/ubuntu impish/main armhf Packages [1358 kB] Get:6 http://ftpmaster.internal/ubuntu impish/main Translation-en [514 kB] Get:7 http://ftpmaster.internal/ubuntu impish/universe armhf Packages [12.6 MB] Get:8 http://ftpmaster.internal/ubuntu impish/universe Translation-en [5461 kB] Fetched 20.2 MB in 8s (2682 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-10 libstdc++-10-dev Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libffi8ubuntu1* The following NEW packages will be installed: cpp-11 g++-11 gcc-11 libexpat1 libffi8 libgcc-11-dev libmpdec3 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libstdc++-11-dev media-types python3 python3-minimal python3-psutil python3.9 python3.9-minimal The following packages will be upgraded: advancecomp apt base-files base-passwd bash binutils binutils-arm-linux-gnueabihf binutils-common bsdutils build-essential ca-certificates cpp cpp-10 dash debconf diffutils dpkg dpkg-dev e2fsprogs findutils g++ g++-10 gcc gcc-10 gcc-10-base gcc-11-base gpg gpg-agent gpgconf gpgv grep gzip libapparmor1 libapt-pkg6.0 libasan6 libassuan0 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdevmapper1.02.1 libdpkg-perl libext2fs2 libgcc-10-dev libgcc-s1 libgcrypt20 libgnutls30 libgomp1 libgssapi-krb5-2 libhogweed6 libidn2-0 libisl23 libk5crypto3 libkmod2 libkrb5-3 libkrb5support0 liblz4-1 liblzma5 libmount1 libnettle8 libnsl-dev libnsl2 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libperl5.32 libprocps8 libreadline8 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-10-dev libstdc++6 libsystemd0 libtirpc-common libtirpc-dev libtirpc3 libubsan1 libudev1 libunistring2 libuuid1 libzstd1 linux-libc-dev login logsave lto-disabled-list mount openssl passwd perl perl-base perl-modules-5.32 pinentry-curses pkgbinarymangler procps readline-common systemd systemd-sysv systemd-timesyncd sysvinit-utils tzdata usrmerge util-linux xz-utils zlib1g 122 upgraded, 17 newly installed, 1 to remove and 0 not upgraded. Need to get 245 MB of archives. After this operation, 453 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu impish/main armhf libcrypt-dev armhf 1:4.4.18-4ubuntu1 [112 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish/main armhf dpkg armhf 1.20.9ubuntu13 [1215 kB] Get:3 http://ftpmaster.internal/ubuntu impish/main armhf libnsl-dev armhf 1.3.0-2 [61.2 kB] Get:4 http://ftpmaster.internal/ubuntu impish/main armhf libc6-dev armhf 2.34-0ubuntu2 [1314 kB] Get:5 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish/main armhf g++ armhf 4:11.2.0-1ubuntu1 [1400 B] Get:6 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish/main armhf gcc armhf 4:11.2.0-1ubuntu1 [5126 B] Get:7 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish/main armhf cpp armhf 4:11.2.0-1ubuntu1 [27.7 kB] Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish/main armhf dpkg-dev all 1.20.9ubuntu13 [938 kB] Get:9 http://ftpmaster.internal/ubuntu impish/main armhf libc-dev-bin armhf 2.34-0ubuntu2 [18.9 kB] Get:10 http://ftpmaster.internal/ubuntu impish/main armhf libcrypt1 armhf 1:4.4.18-4ubuntu1 [86.6 kB] Get:11 http://ftpmaster.internal/ubuntu impish/main armhf libtirpc-common all 1.3.2-2 [7674 B] Get:12 http://ftpmaster.internal/ubuntu impish/main armhf libtirpc-dev armhf 1.3.2-2 [184 kB] Get:13 http://ftpmaster.internal/ubuntu impish/main armhf libk5crypto3 armhf 1.18.3-6 [83.9 kB] Get:14 http://ftpmaster.internal/ubuntu impish/main armhf libkrb5support0 armhf 1.18.3-6 [30.2 kB] Get:15 http://ftpmaster.internal/ubuntu impish/main armhf libkrb5-3 armhf 1.18.3-6 [330 kB] Get:16 http://ppa.launchpad.net/ubuntu-toolchain-r/volatile/ubuntu impish/main armhf libdpkg-perl all 1.20.9ubuntu13 [235 kB] Get:17 http://ftpmaster.internal/ubuntu impish/main armhf libgssapi-krb5-2 armhf 1.18.3-6 [120 kB] Get:18 http://ftpmaster.internal/ubuntu impish/main armhf libcom-err2 armhf 1.46.3-1ubuntu3 [9852 B] Get:19 http://ftpmaster.internal/ubuntu impish/main armhf libperl5.32 armhf 5.32.1-3ubuntu3 [3985 kB] Get:20 http://ftpmaster.internal/ubuntu impish/main armhf perl armhf 5.32.1-3ubuntu3 [227 kB] Get:21 http://ftpmaster.internal/ubuntu impish/main armhf perl-base armhf 5.32.1-3ubuntu3 [1598 kB] Get:22 http://ftpmaster.internal/ubuntu impish/main armhf perl-modules-5.32 all 5.32.1-3ubuntu3 [2945 kB] Get:23 http://ftpmaster.internal/ubuntu impish/main armhf libdb5.3 armhf 5.3.28+dfsg1-0.8ubuntu1 [585 kB] Get:24 http://ftpmaster.internal/ubuntu impish/main armhf zlib1g armhf 1:1.2.11.dfsg-2ubuntu7 [51.3 kB] Get:25 http://ftpmaster.internal/ubuntu impish/main armhf debconf all 1.5.77 [121 kB] Get:26 http://ftpmaster.internal/ubuntu impish/main armhf libc6 armhf 2.34-0ubuntu2 [2500 kB] Get:27 http://ftpmaster.internal/ubuntu impish/main armhf libc-bin armhf 2.34-0ubuntu2 [843 kB] Get:28 http://ftpmaster.internal/ubuntu impish/main armhf libssl1.1 armhf 1.1.1l-1ubuntu1 [1200 kB] Get:29 http://ftpmaster.internal/ubuntu impish/main armhf libtirpc3 armhf 1.3.2-2 [72.3 kB] Get:30 http://ftpmaster.internal/ubuntu impish/main armhf libnsl2 armhf 1.3.0-2 [33.3 kB] Get:31 http://ftpmaster.internal/ubuntu impish/main armhf linux-libc-dev armhf 5.13.0-16.16 [1240 kB] Get:32 http://ftpmaster.internal/ubuntu impish/main armhf libasan6 armhf 11.2.0-7ubuntu2 [2242 kB] Get:33 http://ftpmaster.internal/ubuntu impish/main armhf libubsan1 armhf 11.2.0-7ubuntu2 [893 kB] Get:34 http://ftpmaster.internal/ubuntu impish/main armhf libgomp1 armhf 11.2.0-7ubuntu2 [100 kB] Get:35 http://ftpmaster.internal/ubuntu impish/main armhf gcc-11-base armhf 11.2.0-7ubuntu2 [20.6 kB] Get:36 http://ftpmaster.internal/ubuntu impish/main armhf libgcc-s1 armhf 11.2.0-7ubuntu2 [42.6 kB] Get:37 http://ftpmaster.internal/ubuntu impish/main armhf libcc1-0 armhf 11.2.0-7ubuntu2 [45.8 kB] Get:38 http://ftpmaster.internal/ubuntu impish/main armhf libatomic1 armhf 11.2.0-7ubuntu2 [7626 B] Get:39 http://ftpmaster.internal/ubuntu impish/main armhf libstdc++6 armhf 11.2.0-7ubuntu2 [572 kB] Get:40 http://ftpmaster.internal/ubuntu impish/main armhf base-files armhf 11.1ubuntu3 [60.6 kB] Get:41 http://ftpmaster.internal/ubuntu impish/main armhf bash armhf 5.1-3ubuntu1 [605 kB] Get:42 http://ftpmaster.internal/ubuntu impish/main armhf bsdutils armhf 1:2.36.1-8ubuntu1 [86.7 kB] Get:43 http://ftpmaster.internal/ubuntu impish/main armhf dash armhf 0.5.11+git20210120+802ebd4-1 [78.7 kB] Get:44 http://ftpmaster.internal/ubuntu impish/main armhf diffutils armhf 1:3.8-0ubuntu1 [192 kB] Get:45 http://ftpmaster.internal/ubuntu impish/main armhf findutils armhf 4.8.0-1ubuntu2 [323 kB] Get:46 http://ftpmaster.internal/ubuntu impish/main armhf grep armhf 3.7-0ubuntu1 [185 kB] Get:47 http://ftpmaster.internal/ubuntu impish/main armhf gzip armhf 1.10-4ubuntu1 [91.1 kB] Get:48 http://ftpmaster.internal/ubuntu impish/main armhf login armhf 1:4.8.1-1ubuntu9 [221 kB] Get:49 http://ftpmaster.internal/ubuntu impish/main armhf util-linux armhf 2.36.1-8ubuntu1 [1072 kB] Get:50 http://ftpmaster.internal/ubuntu impish/main armhf base-passwd armhf 3.5.51 [48.6 kB] Get:51 http://ftpmaster.internal/ubuntu impish/main armhf sysvinit-utils armhf 2.96-7ubuntu1 [19.2 kB] Get:52 http://ftpmaster.internal/ubuntu impish/main armhf libgcrypt20 armhf 1.8.7-5ubuntu2 [408 kB] Get:53 http://ftpmaster.internal/ubuntu impish/main armhf liblz4-1 armhf 1.9.3-2 [49.6 kB] Get:54 http://ftpmaster.internal/ubuntu impish/main armhf liblzma5 armhf 5.2.5-2 [83.7 kB] Get:55 http://ftpmaster.internal/ubuntu impish/main armhf systemd-sysv armhf 248.3-1ubuntu7 [10.5 kB] Get:56 http://ftpmaster.internal/ubuntu impish/main armhf systemd-timesyncd armhf 248.3-1ubuntu7 [30.6 kB] Get:57 http://ftpmaster.internal/ubuntu impish/main armhf libapparmor1 armhf 3.0.3-0ubuntu1 [32.7 kB] Get:58 http://ftpmaster.internal/ubuntu impish/main armhf libaudit-common all 1:3.0-2ubuntu2 [4788 B] Get:59 http://ftpmaster.internal/ubuntu impish/main armhf libaudit1 armhf 1:3.0-2ubuntu2 [37.1 kB] Get:60 http://ftpmaster.internal/ubuntu impish/main armhf libblkid1 armhf 2.36.1-8ubuntu1 [131 kB] Get:61 http://ftpmaster.internal/ubuntu impish/main armhf libudev1 armhf 248.3-1ubuntu7 [69.1 kB] Get:62 http://ftpmaster.internal/ubuntu impish/main armhf libdevmapper1.02.1 armhf 2:1.02.175-2.1ubuntu1 [120 kB] Get:63 http://ftpmaster.internal/ubuntu impish/main armhf libuuid1 armhf 2.36.1-8ubuntu1 [22.7 kB] Get:64 http://ftpmaster.internal/ubuntu impish/main armhf libcryptsetup12 armhf 2:2.3.6-0ubuntu1 [193 kB] Get:65 http://ftpmaster.internal/ubuntu impish/main armhf libnettle8 armhf 3.7.3-1 [159 kB] Get:66 http://ftpmaster.internal/ubuntu impish/main armhf libhogweed6 armhf 3.7.3-1 [183 kB] Get:67 http://ftpmaster.internal/ubuntu impish/main armhf libunistring2 armhf 0.9.10-6 [478 kB] Get:68 http://ftpmaster.internal/ubuntu impish/main armhf libidn2-0 armhf 2.3.1-1 [50.3 kB] Get:69 http://ftpmaster.internal/ubuntu impish/main armhf libffi8 armhf 3.4.2-1ubuntu5 [17.8 kB] Get:70 http://ftpmaster.internal/ubuntu impish/main armhf libp11-kit0 armhf 0.23.22-1build1 [217 kB] Get:71 http://ftpmaster.internal/ubuntu impish/main armhf libgnutls30 armhf 3.7.1-5ubuntu1 [921 kB] Get:72 http://ftpmaster.internal/ubuntu impish/main armhf libzstd1 armhf 1.4.8+dfsg-2.1 [255 kB] Get:73 http://ftpmaster.internal/ubuntu impish/main armhf libkmod2 armhf 28-1ubuntu4 [37.8 kB] Get:74 http://ftpmaster.internal/ubuntu impish/main armhf libmount1 armhf 2.36.1-8ubuntu1 [146 kB] Get:75 http://ftpmaster.internal/ubuntu impish/main armhf libpam0g armhf 1.3.1-5ubuntu11 [53.1 kB] Get:76 http://ftpmaster.internal/ubuntu impish/main armhf mount armhf 2.36.1-8ubuntu1 [122 kB] Get:77 http://ftpmaster.internal/ubuntu impish/main armhf systemd armhf 248.3-1ubuntu7 [4305 kB] Get:78 http://ftpmaster.internal/ubuntu impish/main armhf libsystemd0 armhf 248.3-1ubuntu7 [285 kB] Get:79 http://ftpmaster.internal/ubuntu impish/main armhf libapt-pkg6.0 armhf 2.3.9 [895 kB] Get:80 http://ftpmaster.internal/ubuntu impish/main armhf gpgv armhf 2.2.20-1ubuntu4 [172 kB] Get:81 http://ftpmaster.internal/ubuntu impish/main armhf apt armhf 2.3.9 [1373 kB] Get:82 http://ftpmaster.internal/ubuntu impish/main armhf libpam-modules-bin armhf 1.3.1-5ubuntu11 [40.2 kB] Get:83 http://ftpmaster.internal/ubuntu impish/main armhf libpam-modules armhf 1.3.1-5ubuntu11 [255 kB] Get:84 http://ftpmaster.internal/ubuntu impish/main armhf logsave armhf 1.46.3-1ubuntu3 [10.9 kB] Get:85 http://ftpmaster.internal/ubuntu impish/main armhf libext2fs2 armhf 1.46.3-1ubuntu3 [192 kB] Get:86 http://ftpmaster.internal/ubuntu impish/main armhf e2fsprogs armhf 1.46.3-1ubuntu3 [562 kB] Get:87 http://ftpmaster.internal/ubuntu impish/main armhf libpython3.9-minimal armhf 3.9.7-2build1 [772 kB] Get:88 http://ftpmaster.internal/ubuntu impish/main armhf libexpat1 armhf 2.4.1-2 [64.8 kB] Get:89 http://ftpmaster.internal/ubuntu impish/main armhf python3.9-minimal armhf 3.9.7-2build1 [1751 kB] Get:90 http://ftpmaster.internal/ubuntu impish/main armhf python3-minimal armhf 3.9.4-1 [23.8 kB] Get:91 http://ftpmaster.internal/ubuntu impish/main armhf media-types all 4.0.0 [22.2 kB] Get:92 http://ftpmaster.internal/ubuntu impish/main armhf tzdata all 2021a-2ubuntu1 [339 kB] Get:93 http://ftpmaster.internal/ubuntu impish/main armhf libmpdec3 armhf 2.5.1-2 [69.4 kB] Get:94 http://ftpmaster.internal/ubuntu impish/main armhf readline-common all 8.1-2 [54.1 kB] Get:95 http://ftpmaster.internal/ubuntu impish/main armhf libreadline8 armhf 8.1-2 [114 kB] Get:96 http://ftpmaster.internal/ubuntu impish/main armhf libsqlite3-0 armhf 3.35.5-1 [512 kB] Get:97 http://ftpmaster.internal/ubuntu impish/main armhf libpython3.9-stdlib armhf 3.9.7-2build1 [1731 kB] Get:98 http://ftpmaster.internal/ubuntu impish/main armhf python3.9 armhf 3.9.7-2build1 [433 kB] Get:99 http://ftpmaster.internal/ubuntu impish/main armhf libpython3-stdlib armhf 3.9.4-1 [6984 B] Get:100 http://ftpmaster.internal/ubuntu impish/main armhf python3 armhf 3.9.4-1 [22.2 kB] Get:101 http://ftpmaster.internal/ubuntu impish/main armhf libpam-runtime all 1.3.1-5ubuntu11 [38.7 kB] Get:102 http://ftpmaster.internal/ubuntu impish/main armhf libpcre2-8-0 armhf 10.37-0ubuntu2 [189 kB] Get:103 http://ftpmaster.internal/ubuntu impish/main armhf libsmartcols1 armhf 2.36.1-8ubuntu1 [91.1 kB] Get:104 http://ftpmaster.internal/ubuntu impish/main armhf passwd armhf 1:4.8.1-1ubuntu9 [787 kB] Get:105 http://ftpmaster.internal/ubuntu impish/main armhf libprocps8 armhf 2:3.3.17-5ubuntu3 [32.6 kB] Get:106 http://ftpmaster.internal/ubuntu impish/main armhf libss2 armhf 1.46.3-1ubuntu3 [10.1 kB] Get:107 http://ftpmaster.internal/ubuntu impish/main armhf procps armhf 2:3.3.17-5ubuntu3 [373 kB] Get:108 http://ftpmaster.internal/ubuntu impish/main armhf usrmerge all 25ubuntu1 [53.5 kB] Get:109 http://ftpmaster.internal/ubuntu impish/main armhf openssl armhf 1.1.1l-1ubuntu1 [624 kB] Get:110 http://ftpmaster.internal/ubuntu impish/main armhf ca-certificates all 20210119ubuntu1 [149 kB] Get:111 http://ftpmaster.internal/ubuntu impish/main armhf xz-utils armhf 5.2.5-2 [80.7 kB] Get:112 http://ftpmaster.internal/ubuntu impish/main armhf advancecomp armhf 2.1-2.1ubuntu1 [185 kB] Get:113 http://ftpmaster.internal/ubuntu impish/main armhf libctf0 armhf 2.37-7ubuntu1 [93.8 kB] Get:114 http://ftpmaster.internal/ubuntu impish/main armhf libctf-nobfd0 armhf 2.37-7ubuntu1 [93.6 kB] Get:115 http://ftpmaster.internal/ubuntu impish/main armhf binutils-arm-linux-gnueabihf armhf 2.37-7ubuntu1 [3062 kB] Get:116 http://ftpmaster.internal/ubuntu impish/main armhf libbinutils armhf 2.37-7ubuntu1 [492 kB] Get:117 http://ftpmaster.internal/ubuntu impish/main armhf binutils armhf 2.37-7ubuntu1 [3166 B] Get:118 http://ftpmaster.internal/ubuntu impish/main armhf binutils-common armhf 2.37-7ubuntu1 [212 kB] Get:119 http://ftpmaster.internal/ubuntu impish/main armhf libisl23 armhf 0.24-1 [517 kB] Get:120 http://ftpmaster.internal/ubuntu impish/main armhf cpp-11 armhf 11.2.0-7ubuntu2 [48.0 MB] Get:121 http://ftpmaster.internal/ubuntu impish/main armhf libgcc-11-dev armhf 11.2.0-7ubuntu2 [838 kB] Get:122 http://ftpmaster.internal/ubuntu impish/main armhf gcc-11 armhf 11.2.0-7ubuntu2 [54.8 MB] Get:123 http://ftpmaster.internal/ubuntu impish/main armhf libstdc++-11-dev armhf 11.2.0-7ubuntu2 [2125 kB] Get:124 http://ftpmaster.internal/ubuntu impish/main armhf g++-11 armhf 11.2.0-7ubuntu2 [52.3 MB] Get:125 http://ftpmaster.internal/ubuntu impish/main armhf lto-disabled-list all 16 [12.5 kB] Get:126 http://ftpmaster.internal/ubuntu impish/main armhf python3-psutil armhf 5.8.0-1 [151 kB] Get:127 http://ftpmaster.internal/ubuntu impish/main armhf build-essential armhf 12.9ubuntu1 [4740 B] Get:128 http://ftpmaster.internal/ubuntu impish/universe armhf g++-10 armhf 10.3.0-11ubuntu1 [8460 kB] Get:129 http://ftpmaster.internal/ubuntu impish/universe armhf gcc-10 armhf 10.3.0-11ubuntu1 [15.1 MB] Get:130 http://ftpmaster.internal/ubuntu impish/main armhf libstdc++-10-dev armhf 10.3.0-11ubuntu1 [1961 kB] Get:131 http://ftpmaster.internal/ubuntu impish/main armhf libgcc-10-dev armhf 10.3.0-11ubuntu1 [812 kB] Get:132 http://ftpmaster.internal/ubuntu impish/universe armhf cpp-10 armhf 10.3.0-11ubuntu1 [7427 kB] Get:133 http://ftpmaster.internal/ubuntu impish/main armhf gcc-10-base armhf 10.3.0-11ubuntu1 [20.7 kB] Get:134 http://ftpmaster.internal/ubuntu impish/main armhf libassuan0 armhf 2.5.5-1 [31.4 kB] Get:135 http://ftpmaster.internal/ubuntu impish/main armhf pinentry-curses armhf 1.1.1-1 [32.9 kB] Get:136 http://ftpmaster.internal/ubuntu impish/main armhf gpg armhf 2.2.20-1ubuntu4 [428 kB] Get:137 http://ftpmaster.internal/ubuntu impish/main armhf gpgconf armhf 2.2.20-1ubuntu4 [108 kB] Get:138 http://ftpmaster.internal/ubuntu impish/main armhf gpg-agent armhf 2.2.20-1ubuntu4 [196 kB] Get:139 http://ftpmaster.internal/ubuntu impish/main armhf pkgbinarymangler all 148 [32.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 245 MB in 13s (18.4 MB/s) (Reading database ... 12870 files and directories currently installed.) 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Setting up binutils-common:armhf (2.37-7ubuntu1) ... Setting up linux-libc-dev:armhf (5.13.0-16.16) ... Setting up libctf-nobfd0:armhf (2.37-7ubuntu1) ... Setting up libassuan0:armhf (2.5.5-1) ... Setting up libgomp1:armhf (11.2.0-7ubuntu2) ... Setting up libasan6:armhf (11.2.0-7ubuntu2) ... Setting up tzdata (2021a-2ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Oct 5 20:49:16 UTC 2021. Universal Time is now: Tue Oct 5 20:49:16 UTC 2021. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up gcc-10-base:armhf (10.3.0-11ubuntu1) ... Setting up libtirpc-dev:armhf (1.3.2-2) ... Setting up xz-utils (5.2.5-2) ... Setting up libatomic1:armhf (11.2.0-7ubuntu2) ... Setting up usrmerge (25ubuntu1) ... Setting up libss2:armhf (1.46.3-1ubuntu3) ... Setting up libperl5.32:armhf (5.32.1-3ubuntu3) ... Setting up logsave (1.46.3-1ubuntu3) ... Setting up libubsan1:armhf (11.2.0-7ubuntu2) ... Setting up advancecomp (2.1-2.1ubuntu1) ... Setting up libdevmapper1.02.1:armhf (2:1.02.175-2.1ubuntu1) ... Setting up libgcc-11-dev:armhf (11.2.0-7ubuntu2) ... Setting up mount (2.36.1-8ubuntu1) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libcrypt-dev:armhf (1:4.4.18-4ubuntu1) ... Setting up libmpdec3:armhf (2.5.1-2) ... Setting up libcryptsetup12:armhf (2:2.3.6-0ubuntu1) ... Setting up libbinutils:armhf (2.37-7ubuntu1) ... Setting up libisl23:armhf (0.24-1) ... Setting up libc-dev-bin (2.34-0ubuntu2) ... Setting up openssl (1.1.1l-1ubuntu1) ... Setting up readline-common (8.1-2) ... Setting up libcc1-0:armhf (11.2.0-7ubuntu2) ... Setting up libprocps8:armhf (2:3.3.17-5ubuntu3) ... Setting up cpp-10 (10.3.0-11ubuntu1) ... Setting up libkmod2:armhf (28-1ubuntu4) ... Setting up libctf0:armhf (2.37-7ubuntu1) ... Setting up pinentry-curses (1.1.1-1) ... Setting up cpp-11 (11.2.0-7ubuntu2) ... Setting up pkgbinarymangler (148) ... Setting up libgcc-10-dev:armhf (10.3.0-11ubuntu1) ... Setting up libreadline8:armhf (8.1-2) ... Setting up e2fsprogs (1.46.3-1ubuntu3) ... Setting up ca-certificates (20210119ubuntu1) ... Updating certificates in /etc/ssl/certs... 0 added, 1 removed; done. Setting up perl (5.32.1-3ubuntu3) ... Setting up libdpkg-perl (1.20.9ubuntu13) ... Setting up cpp (4:11.2.0-1ubuntu1) ... Setting up procps (2:3.3.17-5ubuntu3) ... update-alternatives: warning: alternative /usr/bin/w.procps (part of link group w) doesn't exist; removing from list of alternatives update-alternatives: warning: /etc/alternatives/w is dangling; it will be updated with best choice Setting up gpgconf (2.2.20-1ubuntu4) ... Setting up libc6-dev:armhf (2.34-0ubuntu2) ... Setting up binutils-arm-linux-gnueabihf (2.37-7ubuntu1) ... Setting up gpg (2.2.20-1ubuntu4) ... Setting up libpython3.9-stdlib:armhf (3.9.7-2build1) ... Setting up libpython3-stdlib:armhf (3.9.4-1) ... Setting up libstdc++-10-dev:armhf (10.3.0-11ubuntu1) ... Setting up gpg-agent (2.2.20-1ubuntu4) ... Setting up binutils (2.37-7ubuntu1) ... Setting up gcc-10 (10.3.0-11ubuntu1) ... Setting up libstdc++-11-dev:armhf (11.2.0-7ubuntu2) ... Setting up gcc-11 (11.2.0-7ubuntu2) ... Setting up python3.9 (3.9.7-2build1) ... Setting up g++-10 (10.3.0-11ubuntu1) ... Setting up g++-11 (11.2.0-7ubuntu2) ... Setting up python3 (3.9.4-1) ... Setting up python3-psutil (5.8.0-1) ... Setting up gcc (4:11.2.0-1ubuntu1) ... Setting up dpkg-dev (1.20.9ubuntu13) ... Setting up g++ (4:11.2.0-1ubuntu1) ... Setting up build-essential (12.9ubuntu1) ... Setting up systemd-timesyncd (248.3-1ubuntu7) ... Installing new version of config file /etc/systemd/timesyncd.conf ... Setting up systemd (248.3-1ubuntu7) ... Installing new version of config file /etc/systemd/journald.conf ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/pstore.conf ... Installing new version of config file /etc/systemd/resolved.conf ... Installing new version of config file /etc/systemd/sleep.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from random generator. Setting up systemd-sysv (248.3-1ubuntu7) ... Processing triggers for libc-bin (2.34-0ubuntu2) ... Processing triggers for ca-certificates (20210119ubuntu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-22133205 armhf impish -c chroot:build-PACKAGEBUILD-22133205 --arch=armhf --dist=impish --nolog fastqtl_2.184+dfsg-7build4.dsc Initiating build PACKAGEBUILD-22133205 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-159-generic #167-Ubuntu SMP Mon Sep 20 23:06:52 UTC 2021 armv7l sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-arm64-023.buildd +==============================================================================+ | fastqtl 2.184+dfsg-7build4 (armhf) Tue, 05 Oct 2021 20:49:32 +0000 | +==============================================================================+ Package: fastqtl Version: 2.184+dfsg-7build4 Source Version: 2.184+dfsg-7build4 Distribution: impish Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-22133205/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- fastqtl_2.184+dfsg-7build4.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/fastqtl-dGoep2/fastqtl-2.184+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/fastqtl-dGoep2' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-iWbjVj/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-iWbjVj/apt_archive ./ InRelease Get:2 copy:/<>/resolver-iWbjVj/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-iWbjVj/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-iWbjVj/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-iWbjVj/apt_archive ./ Packages [433 B] Fetched 1739 B in 0s (50.8 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: cpp-10 g++-10 gcc-10 gcc-10-base libgcc-10-dev libstdc++-10-dev Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 652 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-iWbjVj/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [652 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 652 B in 0s (50.1 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14697 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libgsl-dev, r-mathlib, zlib1g-dev, libblas-dev, libeigen3-dev, libhts-dev Filtered Build-Depends: debhelper-compat (= 12), libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libgsl-dev, r-mathlib, zlib1g-dev, libblas-dev, libeigen3-dev, libhts-dev dpkg-deb: building package 'sbuild-build-depends-fastqtl-dummy' in '/<>/resolver-iWbjVj/apt_archive/sbuild-build-depends-fastqtl-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-fastqtl-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-iWbjVj/apt_archive ./ InRelease Get:2 copy:/<>/resolver-iWbjVj/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-iWbjVj/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-iWbjVj/apt_archive ./ Sources [554 B] Get:5 copy:/<>/resolver-iWbjVj/apt_archive ./ Packages [634 B] Fetched 2151 B in 0s (57.7 kB/s) Reading package lists... Reading package lists... Install fastqtl build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: g++-10 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-dev libblas3 libboost-dev libboost-iostreams-dev libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-program-options-dev libboost-program-options1.74-dev libboost-program-options1.74.0 libboost-regex1.74-dev libboost-regex1.74.0 libboost1.74-dev libbrotli1 libcurl3-gnutls libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libdw1 libeigen3-dev libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libgsl-dev libgsl25 libgslcblas0 libhts-dev libhts3 libhtscodecs2 libicu-dev libicu67 libldap-2.5-0 liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config po-debconf r-mathlib zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff liblapack-doc libboost-doc libboost1.74-doc libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev libboost-context1.74-dev libboost-contract1.74-dev libboost-coroutine1.74-dev libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev libboost-filesystem1.74-dev libboost-graph1.74-dev libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev libboost-python1.74-dev libboost-random1.74-dev libboost-serialization1.74-dev libboost-stacktrace1.74-dev libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libeigen3-doc gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html icu-doc liblzma-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl r-base-core r-base-dev The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-dev libblas3 libboost-dev libboost-iostreams-dev libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-program-options-dev libboost-program-options1.74-dev libboost-program-options1.74.0 libboost-regex1.74-dev libboost-regex1.74.0 libboost1.74-dev libbrotli1 libcurl3-gnutls libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libdw1 libeigen3-dev libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libgsl-dev libgsl25 libgslcblas0 libhts-dev libhts3 libhtscodecs2 libicu-dev libicu67 libldap-2.5-0 liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config po-debconf r-mathlib sbuild-build-depends-fastqtl-dummy zlib1g-dev 0 upgraded, 71 newly installed, 0 to remove and 0 not upgraded. Need to get 52.3 MB of archives. After this operation, 290 MB of additional disk space will be used. Get:1 copy:/<>/resolver-iWbjVj/apt_archive ./ sbuild-build-depends-fastqtl-dummy 0.invalid.0 [720 B] Get:2 http://ftpmaster.internal/ubuntu impish/main armhf bsdextrautils armhf 2.36.1-8ubuntu1 [80.7 kB] Get:3 http://ftpmaster.internal/ubuntu impish/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get:4 http://ftpmaster.internal/ubuntu impish/main armhf groff-base armhf 1.22.4-7 [870 kB] Get:5 http://ftpmaster.internal/ubuntu impish/main armhf libpipeline1 armhf 1.5.3-1 [23.3 kB] Get:6 http://ftpmaster.internal/ubuntu impish/main armhf man-db armhf 2.9.4-2 [1118 kB] Get:7 http://ftpmaster.internal/ubuntu impish/main armhf libelf1 armhf 0.185-1 [39.9 kB] Get:8 http://ftpmaster.internal/ubuntu impish/main armhf libglib2.0-0 armhf 2.68.4-1build1 [1288 kB] Get:9 http://ftpmaster.internal/ubuntu impish/main armhf libicu67 armhf 67.1-7ubuntu1 [9788 kB] Get:10 http://ftpmaster.internal/ubuntu impish/main armhf libxml2 armhf 2.9.12+dfsg-4 [598 kB] Get:11 http://ftpmaster.internal/ubuntu impish/main armhf libmagic-mgc armhf 1:5.39-3 [228 kB] Get:12 http://ftpmaster.internal/ubuntu impish/main armhf libmagic1 armhf 1:5.39-3 [71.7 kB] Get:13 http://ftpmaster.internal/ubuntu impish/main armhf file armhf 1:5.39-3 [22.7 kB] Get:14 http://ftpmaster.internal/ubuntu impish/main armhf gettext-base armhf 0.21-4ubuntu3 [36.0 kB] Get:15 http://ftpmaster.internal/ubuntu impish/main armhf libpsl5 armhf 0.21.0-1.2 [52.3 kB] Get:16 http://ftpmaster.internal/ubuntu impish/main armhf libsigsegv2 armhf 2.13-1ubuntu1 [13.4 kB] Get:17 http://ftpmaster.internal/ubuntu impish/main armhf m4 armhf 1.4.18-5ubuntu1 [192 kB] Get:18 http://ftpmaster.internal/ubuntu impish/main armhf autoconf all 2.69-14 [293 kB] Get:19 http://ftpmaster.internal/ubuntu impish/main armhf autotools-dev all 20180224.1+nmu1 [39.4 kB] Get:20 http://ftpmaster.internal/ubuntu impish/main armhf automake all 1:1.16.4-2 [557 kB] Get:21 http://ftpmaster.internal/ubuntu impish/main armhf autopoint all 0.21-4ubuntu3 [422 kB] Get:22 http://ftpmaster.internal/ubuntu impish/main armhf libdebhelper-perl all 13.3.4ubuntu2 [62.5 kB] Get:23 http://ftpmaster.internal/ubuntu impish/main armhf libtool all 2.4.6-15 [161 kB] Get:24 http://ftpmaster.internal/ubuntu impish/main armhf dh-autoreconf all 20 [16.1 kB] Get:25 http://ftpmaster.internal/ubuntu impish/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] Get:26 http://ftpmaster.internal/ubuntu impish/main armhf libsub-override-perl all 0.09-2 [9532 B] Get:27 http://ftpmaster.internal/ubuntu impish/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [17.5 kB] Get:28 http://ftpmaster.internal/ubuntu impish/main armhf dh-strip-nondeterminism all 1.12.0-1 [5228 B] Get:29 http://ftpmaster.internal/ubuntu impish/main armhf libdw1 armhf 0.185-1 [198 kB] Get:30 http://ftpmaster.internal/ubuntu impish/main armhf debugedit armhf 1:5.0-0ubuntu2 [43.9 kB] Get:31 http://ftpmaster.internal/ubuntu impish/main armhf dwz armhf 0.14-1 [90.7 kB] Get:32 http://ftpmaster.internal/ubuntu impish/main armhf gettext armhf 0.21-4ubuntu3 [755 kB] Get:33 http://ftpmaster.internal/ubuntu impish/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:34 http://ftpmaster.internal/ubuntu impish/main armhf po-debconf all 1.0.21+nmu1 [233 kB] Get:35 http://ftpmaster.internal/ubuntu impish/main armhf debhelper all 13.3.4ubuntu2 [921 kB] Get:36 http://ftpmaster.internal/ubuntu impish/main armhf icu-devtools armhf 67.1-7ubuntu1 [183 kB] Get:37 http://ftpmaster.internal/ubuntu impish/main armhf libblas3 armhf 3.9.0-3ubuntu2 [97.6 kB] Get:38 http://ftpmaster.internal/ubuntu impish/main armhf libblas-dev armhf 3.9.0-3ubuntu2 [104 kB] Get:39 http://ftpmaster.internal/ubuntu impish/main armhf libboost1.74-dev armhf 1.74.0-8ubuntu6 [9607 kB] Get:40 http://ftpmaster.internal/ubuntu impish/main armhf libboost-dev armhf 1.74.0.3ubuntu5 [3580 B] Get:41 http://ftpmaster.internal/ubuntu impish/main armhf libboost-regex1.74.0 armhf 1.74.0-8ubuntu6 [470 kB] Get:42 http://ftpmaster.internal/ubuntu impish/main armhf libicu-dev armhf 67.1-7ubuntu1 [10.8 MB] Get:43 http://ftpmaster.internal/ubuntu impish/main armhf libboost-regex1.74-dev armhf 1.74.0-8ubuntu6 [598 kB] Get:44 http://ftpmaster.internal/ubuntu impish/main armhf libboost-iostreams1.74.0 armhf 1.74.0-8ubuntu6 [241 kB] Get:45 http://ftpmaster.internal/ubuntu impish/universe armhf libboost-iostreams1.74-dev armhf 1.74.0-8ubuntu6 [251 kB] Get:46 http://ftpmaster.internal/ubuntu impish/universe armhf libboost-iostreams-dev armhf 1.74.0.3ubuntu5 [3320 B] Get:47 http://ftpmaster.internal/ubuntu impish/main armhf libboost-program-options1.74.0 armhf 1.74.0-8ubuntu6 [332 kB] Get:48 http://ftpmaster.internal/ubuntu impish/main armhf libboost-program-options1.74-dev armhf 1.74.0-8ubuntu6 [382 kB] Get:49 http://ftpmaster.internal/ubuntu impish/main armhf libboost-program-options-dev armhf 1.74.0.3ubuntu5 [3360 B] Get:50 http://ftpmaster.internal/ubuntu impish/main armhf libbrotli1 armhf 1.0.9-2build2 [259 kB] Get:51 http://ftpmaster.internal/ubuntu impish/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2.1build1 [13.2 kB] Get:52 http://ftpmaster.internal/ubuntu impish/main armhf libsasl2-2 armhf 2.1.27+dfsg-2.1build1 [42.4 kB] Get:53 http://ftpmaster.internal/ubuntu impish/main armhf libldap-2.5-0 armhf 2.5.6+dfsg-1~exp1ubuntu1 [162 kB] Get:54 http://ftpmaster.internal/ubuntu impish/main armhf libnghttp2-14 armhf 1.43.0-1 [61.2 kB] Get:55 http://ftpmaster.internal/ubuntu impish/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build2 [48.9 kB] Get:56 http://ftpmaster.internal/ubuntu impish/main armhf libssh-4 armhf 0.9.6-1 [163 kB] Get:57 http://ftpmaster.internal/ubuntu impish/main armhf libcurl3-gnutls armhf 7.74.0-1.3ubuntu2 [234 kB] Get:58 http://ftpmaster.internal/ubuntu impish/main armhf libcurl4-gnutls-dev armhf 7.74.0-1.3ubuntu2 [337 kB] Get:59 http://ftpmaster.internal/ubuntu impish/main armhf libdeflate0 armhf 1.7-2ubuntu2 [46.1 kB] Get:60 http://ftpmaster.internal/ubuntu impish/main armhf libdeflate-dev armhf 1.7-2ubuntu2 [40.4 kB] Get:61 http://ftpmaster.internal/ubuntu impish/universe armhf libgslcblas0 armhf 2.6+dfsg-2 [62.8 kB] Get:62 http://ftpmaster.internal/ubuntu impish/universe armhf libgsl25 armhf 2.6+dfsg-2 [743 kB] Get:63 http://ftpmaster.internal/ubuntu impish/universe armhf libgsl-dev armhf 2.6+dfsg-2 [964 kB] Get:64 http://ftpmaster.internal/ubuntu impish/universe armhf libhtscodecs2 armhf 1.1.1-2 [53.5 kB] Get:65 http://ftpmaster.internal/ubuntu impish/universe armhf libhts3 armhf 1.13+ds-2 [346 kB] Get:66 http://ftpmaster.internal/ubuntu impish/main armhf liblzma-dev armhf 5.2.5-2 [142 kB] Get:67 http://ftpmaster.internal/ubuntu impish/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2ubuntu7 [157 kB] Get:68 http://ftpmaster.internal/ubuntu impish/universe armhf libhts-dev armhf 1.13+ds-2 [4037 kB] Get:69 http://ftpmaster.internal/ubuntu impish/main armhf pkg-config armhf 0.29.2-1ubuntu1 [43.4 kB] Get:70 http://ftpmaster.internal/ubuntu impish/universe armhf r-mathlib armhf 4.0.4-1build1 [1995 kB] Get:71 http://ftpmaster.internal/ubuntu impish/universe armhf libeigen3-dev all 3.3.9-2 [817 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 52.3 MB in 3s (16.4 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 14697 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8ubuntu1_armhf.deb ... Unpacking bsdextrautils (2.36.1-8ubuntu1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-7_armhf.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../05-libelf1_0.185-1_armhf.deb ... Unpacking libelf1:armhf (0.185-1) ... 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Setting up bsdextrautils (2.36.1-8ubuntu1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:armhf (67.1-7ubuntu1) ... Setting up libgslcblas0:armhf (2.6+dfsg-2) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libgsl25:armhf (2.6+dfsg-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:armhf (2.68.4-1build1) ... No schema files found: doing nothing. Setting up libboost-iostreams1.74.0:armhf (1.74.0-8ubuntu6) ... Setting up libboost-program-options1.74.0:armhf (1.74.0-8ubuntu6) ... Setting up libdebhelper-perl (13.3.4ubuntu2) ... Setting up libbrotli1:armhf (1.0.9-2build2) ... Setting up libnghttp2-14:armhf (1.43.0-1) ... Setting up libmagic1:armhf (1:5.39-3) ... Setting up libdeflate0:armhf (1.7-2ubuntu2) ... Setting up gettext-base (0.21-4ubuntu3) ... Setting up file (1:5.39-3) ... Setting up libboost-program-options1.74-dev:armhf (1.74.0-8ubuntu6) ... 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Setting up dwz (0.14-1) ... Setting up libboost-regex1.74-dev:armhf (1.74.0-8ubuntu6) ... Setting up groff-base (1.22.4-7) ... Setting up debugedit (1:5.0-0ubuntu2) ... Setting up automake (1:1.16.4-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up libcurl3-gnutls:armhf (7.74.0-1.3ubuntu2) ... Setting up libcurl4-gnutls-dev:armhf (7.74.0-1.3ubuntu2) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libboost-iostreams1.74-dev:armhf (1.74.0-8ubuntu6) ... Setting up dh-autoreconf (20) ... Setting up libhts3:armhf (1.13+ds-2) ... Setting up libhts-dev:armhf (1.13+ds-2) ... Setting up debhelper (13.3.4ubuntu2) ... Setting up libboost-iostreams-dev:armhf (1.74.0.3ubuntu5) ... 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Processing triggers for libc-bin (2.34-0ubuntu2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-159-generic arm64 (armv7l) Toolchain package versions: binutils_2.37-7ubuntu1 dpkg-dev_1.20.9ubuntu13 g++-10_10.3.0-11ubuntu1 g++-11_11.2.0-7ubuntu2 gcc-10_10.3.0-11ubuntu1 gcc-11_11.2.0-7ubuntu2 libc6-dev_2.34-0ubuntu2 libstdc++-10-dev_10.3.0-11ubuntu1 libstdc++-11-dev_11.2.0-7ubuntu2 libstdc++6_11.2.0-7ubuntu2 linux-libc-dev_5.13.0-16.16 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1ubuntu1 apt_2.3.9 autoconf_2.69-14 automake_1:1.16.4-2 autopoint_0.21-4ubuntu3 autotools-dev_20180224.1+nmu1 base-files_11.1ubuntu3 base-passwd_3.5.51 bash_5.1-3ubuntu1 binutils_2.37-7ubuntu1 binutils-arm-linux-gnueabihf_2.37-7ubuntu1 binutils-common_2.37-7ubuntu1 bsdextrautils_2.36.1-8ubuntu1 bsdutils_1:2.36.1-8ubuntu1 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rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-fastqtl-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.14 systemd_248.3-1ubuntu7 systemd-sysv_248.3-1ubuntu7 systemd-timesyncd_248.3-1ubuntu7 sysvinit-utils_2.96-7ubuntu1 tar_1.34+dfsg-1build1 tzdata_2021a-2ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_25ubuntu1 util-linux_2.36.1-8ubuntu1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2ubuntu7 zlib1g-dev_1:1.2.11.dfsg-2ubuntu7 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sat Dec 12 12:17:49 2020 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fastqtl_2.184+dfsg-7build4.dsc dpkg-source: info: extracting fastqtl in /<>/fastqtl-2.184+dfsg dpkg-source: info: unpacking fastqtl_2.184+dfsg.orig.tar.xz dpkg-source: info: unpacking fastqtl_2.184+dfsg-7build4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_Makefile_dynamic_hardenings.patch dpkg-source: info: applying 02_Replace_libtabix_by_libhts.patch dpkg-source: info: applying 03_Reproducible_builds.patch dpkg-source: info: applying cross.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-22133205 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-22133205 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-22133205 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage.pl: info: source package fastqtl dpkg-buildpackage.pl: info: source version 2.184+dfsg-7build4 dpkg-buildpackage.pl: info: source distribution hirsute dpkg-source --before-build . dpkg-buildpackage.pl: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean make -j4 clean make[1]: Entering directory '/<>/fastqtl-2.184+dfsg' rm -f obj/*.o bin/fastQTL make[1]: Leaving directory '/<>/fastqtl-2.184+dfsg' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>/fastqtl-2.184+dfsg' mkdir -p /<>/fastqtl-2.184+dfsg/obj/ mkdir -p /<>/fastqtl-2.184+dfsg/bin/ dh_auto_build -- CXXFLAGS='-g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' make -j4 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security" make[2]: Entering directory '/<>/fastqtl-2.184+dfsg' g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisMapping.o -c src/analysisMapping.cpp -Isrc g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisNominal.o -c src/analysisNominal.cpp -Isrc g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutation.o -c src/analysisPermutation.cpp -Isrc g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationInteraction.o -c src/analysisPermutationInteraction.cpp -Isrc In file included from src/analysisPermutation.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from src/analysisPermutationInteraction.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from src/analysisNominal.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from src/analysisMapping.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from /usr/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutation.cpp:17: /usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from /usr/include/c++/11/vector:67, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutation.cpp:17: /usr/include/c++/11/bits/stl_vector.h: In member function ‘void data::runPermutation(std::string, std::vector)’: /usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutation.cpp:17: /usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationPerGroup.o -c src/analysisPermutationPerGroup.cpp -Isrc g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationSequence.o -c src/analysisPermutationSequence.cpp -Isrc g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/commands.o -c src/commands.cpp -Isrc g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/df.o -c src/df.cpp -Isrc In file included from src/analysisPermutationPerGroup.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from /usr/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationPerGroup.cpp:17: /usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from src/analysisPermutationSequence.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from /usr/include/c++/11/vector:67, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationPerGroup.cpp:17: /usr/include/c++/11/bits/stl_vector.h: In member function ‘void data::runPermutationPerGroup(std::string, std::vector)’: /usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationPerGroup.cpp:17: /usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/df.cpp:24:9: error: reference to ‘data’ is ambiguous 24 | data * D; | ^~~~ In file included from /usr/include/c++/11/string:54, from src/utils/utils.h:44, from src/data.h:25, from src/df.cpp:17: /usr/include/c++/11/bits/range_access.h:319:5: note: candidates are: ‘template constexpr const _Tp* std::data(std::initializer_list<_Tp>)’ 319 | data(initializer_list<_Tp> __il) noexcept | ^~~~ /usr/include/c++/11/bits/range_access.h:310:5: note: ‘template constexpr _Tp* std::data(_Tp (&)[_Nm])’ 310 | data(_Tp (&__array)[_Nm]) noexcept | ^~~~ /usr/include/c++/11/bits/range_access.h:300:5: note: ‘template constexpr decltype (__cont.data()) std::data(const _Container&)’ 300 | data(const _Container& __cont) noexcept(noexcept(__cont.data())) | ^~~~ /usr/include/c++/11/bits/range_access.h:290:5: note: ‘template constexpr decltype (__cont.data()) std::data(_Container&)’ 290 | data(_Container& __cont) noexcept(noexcept(__cont.data())) | ^~~~ In file included from src/df.cpp:17: src/data.h:30:7: note: ‘class data’ 30 | class data { | ^~~~ src/df.cpp:28:31: error: expected ‘)’ before ‘*’ token 28 | data_to_function (data * _D, int _n, double * _C) { | ~ ^~ | ) src/df.cpp: In function ‘double degreeOfFreedom(const gsl_vector*, void*)’: src/df.cpp:41:30: error: ‘struct data_to_function’ has no member named ‘D’ 41 | pval[c] = d->D->getPvalue(d->C[c], gsl_vector_get(v, 0)); | ^ src/df.cpp: In member function ‘int data::learnDF(std::vector&, double&)’: src/df.cpp:65:84: error: new initializer expression list treated as compound expression [-fpermissive] 65 | data_to_function * par = new data_to_function (this, corr.size(), &corr[0]); | ^ src/df.cpp:65:57: warning: left operand of comma operator has no effect [-Wunused-value] 65 | data_to_function * par = new data_to_function (this, corr.size(), &corr[0]); | ^~~~ src/df.cpp:65:84: error: no matching function for call to ‘data_to_function::data_to_function(__gnu_cxx::__alloc_traits, double>::value_type*)’ 65 | data_to_function * par = new data_to_function (this, corr.size(), &corr[0]); | ^ src/df.cpp:23:8: note: candidate: ‘data_to_function::data_to_function()’ 23 | struct data_to_function { | ^~~~~~~~~~~~~~~~ src/df.cpp:23:8: note: candidate expects 0 arguments, 1 provided src/df.cpp:23:8: note: candidate: ‘constexpr data_to_function::data_to_function(const data_to_function&)’ src/df.cpp:23:8: note: no known conversion for argument 1 from ‘__gnu_cxx::__alloc_traits, double>::value_type*’ {aka ‘double*’} to ‘const data_to_function&’ src/df.cpp:23:8: note: candidate: ‘constexpr data_to_function::data_to_function(data_to_function&&)’ src/df.cpp:23:8: note: no known conversion for argument 1 from ‘__gnu_cxx::__alloc_traits, double>::value_type*’ {aka ‘double*’} to ‘data_to_function&&’ In file included from /usr/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationSequence.cpp:17: /usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 make[2]: *** [Makefile:97: obj/df.o] Error 1 make[2]: *** Waiting for unfinished jobs.... In file included from /usr/include/c++/11/vector:67, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationSequence.cpp:17: /usr/include/c++/11/bits/stl_vector.h: In member function ‘void data::runPermutation(std::string, std::string)’: /usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationSequence.cpp:17: /usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/<>/fastqtl-2.184+dfsg' dh_auto_build: error: make -j4 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -ffile-prefix-map=/<>/fastqtl-2.184+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security" returned exit code 2 make[1]: *** [debian/rules:14: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<>/fastqtl-2.184+dfsg' make: *** [debian/rules:9: build-arch] Error 2 dpkg-buildpackage.pl: error: debian/rules build-arch subprocess returned exit status 2 === USAGE-SUMMARY BEGIN === SUMMARY: host: bos02-arm64-023; CPUs: 4/4; CPU avg: 87%; CPU max: 100%; base memory: 0.2 GB; peak memory: 1.3 GB; total memory: 7.8 GB SUMMARY: swap peak/total: 0.0/0.0 GB; disk start/end/total: 3.1/3.1/58.0 GB; disk delta: 0.0 GB === USAGE-SUMMARY END === -------------------------------------------------------------------------------- Build finished at 2021-10-05T20:50:47Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: n/a Build-Time: 34 Distribution: impish Fail-Stage: build Host Architecture: armhf Install-Time: 38 Job: fastqtl_2.184+dfsg-7build4.dsc Machine Architecture: arm64 Package: fastqtl Package-Time: 75 Source-Version: 2.184+dfsg-7build4 Space: n/a Status: attempted Version: 2.184+dfsg-7build4 -------------------------------------------------------------------------------- Finished at 2021-10-05T20:50:47Z Build needed 00:01:15, no disk space E: Build failure (dpkg-buildpackage died) Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=impish --arch=armhf PACKAGEBUILD-22133205 Scanning for processes to kill in build PACKAGEBUILD-22133205