https://launchpad.net/ubuntu/+archive/test-rebuild-20240502-noble/+build/28178183 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos03-arm64-031 5.4.0-177-generic #197-Ubuntu SMP Thu Mar 28 22:51:24 UTC 2024 aarch64 Buildd toolchain package versions: launchpad-buildd_237~660~ubuntu20.04.1 python3-lpbuildd_237~660~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 13 May 08:03:48 ntpdate[1860]: adjust time server 10.211.37.1 offset 0.000288 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28178183 --image-type chroot /home/buildd/filecache-default/59612f0fc5bae33f6226b6e60c2e882b82c04bd0 Creating target for build PACKAGEBUILD-28178183 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28178183 Starting target for build PACKAGEBUILD-28178183 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28178183 'deb http://ftpmaster.internal/ubuntu noble main universe' Overriding sources.list in build-PACKAGEBUILD-28178183 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28178183 Updating target for build PACKAGEBUILD-28178183 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [256 kB] Get:2 http://ftpmaster.internal/ubuntu noble/main armhf Packages [1302 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main Translation-en [513 kB] Get:4 http://ftpmaster.internal/ubuntu noble/universe armhf Packages [14.2 MB] Get:5 http://ftpmaster.internal/ubuntu noble/universe Translation-en [5982 kB] Fetched 22.2 MB in 6s (3962 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libnsl-dev libtirpc-dev libunistring2 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libapt-pkg6.0* libdb5.3* libext2fs2* libgdbm-compat4* libgdbm6* libgnutls30* libhogweed6* libnettle8* libnpth0* libperl5.36* libpng16-16* libreadline8* libssl3* libtirpc3* usrmerge* The following NEW packages will be installed: cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf gcc-14-base gcc-arm-linux-gnueabihf libapt-pkg6.0t64 libdb5.3t64 libext2fs2t64 libgdbm-compat4t64 libgdbm6t64 libgnutls30t64 libhogweed6t64 libnettle8t64 libnpth0t64 libperl5.38t64 libpng16-16t64 libreadline8t64 libssl3t64 libtirpc3t64 libunistring5 perl-modules-5.38 The following packages will be upgraded: advancecomp apt apt-utils base-files base-passwd bash bash-completion binutils binutils-arm-linux-gnueabihf binutils-common bsdextrautils bsdutils bzip2 ca-certificates coreutils cpp cpp-13 dash debconf debconf-i18n debianutils diffutils dpkg dpkg-dev e2fsprogs fakeroot findutils g++ g++-13 gcc gcc-13 gcc-13-base gpg gpg-agent gpgconf gpgv grep gzip hostname init init-system-helpers krb5-locales libacl1 libapparmor1 libargon2-1 libasan8 libassuan0 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgcrypt20 libgmp10 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgssapi-krb5-2 libidn2-0 libip4tc2 libisl23 libjansson4 libjson-c5 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 liblocale-gettext-perl liblockfile-bin liblockfile1 liblz4-1 liblzma5 libmd0 libmount1 libmpc3 libmpfr6 libncursesw6 libnsl-dev libnsl2 libnss-nis libnss-nisplus libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libproc2-0 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libss2 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtasn1-6 libtext-charwidth-perl libtext-iconv-perl libtinfo6 libtirpc-common libtirpc-dev libubsan1 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev lockfile-progs login logsave lto-disabled-list make mawk mount ncurses-base ncurses-bin openssl optipng passwd patch perl perl-base pinentry-curses procps psmisc readline-common rpcsvc-proto sed sensible-utils systemd systemd-dev systemd-sysv sysvinit-utils tar tzdata ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 171 upgraded, 23 newly installed, 15 to remove and 0 not upgraded. Need to get 98.9 MB of archives. After this operation, 24.6 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-common all 1.3.4+ds-1.1build1 [8094 B] Get:2 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-dev armhf 1.3.4+ds-1.1build1 [184 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main armhf libnsl-dev armhf 1.3.0-3build3 [66.2 kB] Get:4 http://ftpmaster.internal/ubuntu noble/main armhf libnsl2 armhf 1.3.0-3build3 [36.5 kB] Get:5 http://ftpmaster.internal/ubuntu noble/universe armhf libnss-nisplus armhf 1.3-5build1 [20.1 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main armhf libgssapi-krb5-2 armhf 1.20.1-6ubuntu2 [119 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5-3 armhf 1.20.1-6ubuntu2 [321 kB] Get:8 http://ftpmaster.internal/ubuntu noble/main armhf libk5crypto3 armhf 1.20.1-6ubuntu2 [78.6 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5support0 armhf 1.20.1-6ubuntu2 [31.4 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main armhf openssl armhf 3.0.13-0ubuntu3 [974 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main armhf libacl1 armhf 2.3.2-1build1 [15.1 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main armhf libapparmor1 armhf 4.0.0-beta3-0ubuntu3 [45.1 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main armhf libaudit-common all 1:3.1.2-2.1build1 [5736 B] Get:14 http://ftpmaster.internal/ubuntu noble/main armhf libcap-ng0 armhf 0.8.4-2build2 [13.6 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main armhf libaudit1 armhf 1:3.1.2-2.1build1 [44.4 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libblkid1 armhf 2.39.3-9ubuntu6 [160 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main armhf libcap2 armhf 1:2.66-5ubuntu2 [25.8 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main armhf libcrypt-dev armhf 1:4.4.36-4build1 [120 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main armhf libcrypt1 armhf 1:4.4.36-4build1 [92.6 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error-l10n all 1.47-3build2 [8064 B] Get:21 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error0 armhf 1.47-3build2 [61.6 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main armhf libgcrypt20 armhf 1.10.3-2build1 [454 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main armhf liblzma5 armhf 5.6.1+really5.4.5-1 [111 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main armhf libzstd1 armhf 1.5.5+dfsg2-2build1 [265 kB] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf libkmod2 armhf 31+20240202-2ubuntu7 [45.1 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main armhf liblz4-1 armhf 1.9.4-1build1 [58.0 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-8-0 armhf 10.42-4ubuntu2 [198 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main armhf libselinux1 armhf 3.5-2ubuntu2 [70.9 kB] Get:29 http://ftpmaster.internal/ubuntu noble/main armhf libmount1 armhf 2.39.3-9ubuntu6 [171 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main armhf perl-modules-5.38 all 5.38.2-3.2build2 [3110 kB] Get:31 http://ftpmaster.internal/ubuntu noble/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-7 [662 kB] Get:32 http://ftpmaster.internal/ubuntu noble/main armhf libgdbm6t64 armhf 1.23-5.1build1 [30.3 kB] Get:33 http://ftpmaster.internal/ubuntu noble/main armhf libgdbm-compat4t64 armhf 1.23-5.1build1 [6216 B] Get:34 http://ftpmaster.internal/ubuntu noble/main armhf libperl5.38t64 armhf 5.38.2-3.2build2 [4109 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main armhf perl armhf 5.38.2-3.2build2 [231 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main armhf perl-base armhf 5.38.2-3.2build2 [1671 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main armhf liblocale-gettext-perl armhf 1.07-6ubuntu5 [15.1 kB] Get:38 http://ftpmaster.internal/ubuntu noble/main armhf libtext-iconv-perl armhf 1.7-8build3 [12.7 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main armhf libtext-charwidth-perl armhf 0.04-11build3 [8992 B] Get:40 http://ftpmaster.internal/ubuntu noble/universe armhf libnss-nis armhf 3.1-0ubuntu7 [23.1 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main armhf libc-dev-bin armhf 2.39-0ubuntu8 [19.1 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libc6-dev armhf 2.39-0ubuntu8 [1352 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf libc6 armhf 2.39-0ubuntu8 [2828 kB] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf libc-bin armhf 2.39-0ubuntu8 [530 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf libsystemd-shared armhf 255.4-1ubuntu8 [2010 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf libcryptsetup12 armhf 2:2.7.0-1ubuntu4 [238 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf libssl3t64 armhf 3.0.13-0ubuntu3 [1558 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main armhf systemd-dev all 255.4-1ubuntu8 [104 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf systemd-sysv armhf 255.4-1ubuntu8 [11.9 kB] Get:51 http://ftpmaster.internal/ubuntu noble/main armhf systemd armhf 255.4-1ubuntu8 [3501 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main armhf libsystemd0 armhf 255.4-1ubuntu8 [410 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules-bin armhf 1.5.3-5ubuntu5 [47.0 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules armhf 1.5.3-5ubuntu5 [260 kB] Get:55 http://ftpmaster.internal/ubuntu noble/main armhf libapt-pkg6.0t64 armhf 2.7.14build2 [986 kB] Get:56 http://ftpmaster.internal/ubuntu noble/main armhf libnettle8t64 armhf 3.9.1-2.2build1 [187 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main armhf libhogweed6t64 armhf 3.9.1-2.2build1 [187 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main armhf libp11-kit0 armhf 0.25.3-4ubuntu2 [258 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main armhf libunistring5 armhf 1.1-2build1 [513 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main armhf libgnutls30t64 armhf 3.8.3-1.1ubuntu3 [947 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main armhf apt armhf 2.7.14build2 [1368 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main armhf apt-utils armhf 2.7.14build2 [210 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main armhf bzip2 armhf 1.0.8-5.1 [33.5 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main armhf libbz2-1.0 armhf 1.0.8-5.1 [31.1 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main armhf zlib1g armhf 1:1.3.dfsg-3.1ubuntu2 [49.2 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf debconf-i18n all 1.5.86ubuntu1 [205 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main armhf debconf all 1.5.86ubuntu1 [124 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf libpam0g armhf 1.5.3-5ubuntu5 [62.1 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf libseccomp2 armhf 2.5.5-1ubuntu3 [49.5 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main armhf libargon2-1 armhf 0~20190702+dfsg-4build1 [22.6 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main armhf libudev1 armhf 255.4-1ubuntu8 [167 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main armhf libdevmapper1.02.1 armhf 2:1.02.185-3ubuntu3 [135 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main armhf libjson-c5 armhf 0.17-1build1 [31.3 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main armhf libuuid1 armhf 2.39.3-9ubuntu6 [34.7 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main armhf libfdisk1 armhf 2.39.3-9ubuntu6 [196 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main armhf mount armhf 2.39.3-9ubuntu6 [133 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main armhf libcom-err2 armhf 1.47.0-2.4~exp1ubuntu4 [21.9 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main armhf libkeyutils1 armhf 1.6.3-3build1 [8236 B] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc3t64 armhf 1.3.4+ds-1.1build1 [73.3 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main armhf linux-libc-dev armhf 6.8.0-31.31 [1557 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main armhf gcc-14-base armhf 14-20240412-0ubuntu1 [47.6 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-s1 armhf 14-20240412-0ubuntu1 [41.5 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main armhf base-files armhf 13ubuntu10 [73.3 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf debianutils armhf 5.17build1 [89.0 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main armhf bash armhf 5.2.21-2ubuntu4 [668 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf bsdutils armhf 1:2.39.3-9ubuntu6 [102 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main armhf coreutils armhf 9.4-3ubuntu6 [1280 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++6 armhf 14-20240412-0ubuntu1 [714 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main armhf libxxhash0 armhf 0.8.2-2build1 [31.5 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libgmp10 armhf 2:6.3.0+dfsg-2ubuntu6 [207 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main armhf libffi8 armhf 3.4.6-1build1 [21.2 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main armhf libidn2-0 armhf 2.3.7-2build1 [96.2 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main armhf libtasn1-6 armhf 4.19.0-3build1 [37.2 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main armhf libdebconfclient0 armhf 0.271ubuntu3 [10.9 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main armhf base-passwd armhf 3.6.3build1 [50.9 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main armhf libassuan0 armhf 2.5.6-1build1 [31.3 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main armhf libsqlite3-0 armhf 3.45.1-1ubuntu2 [590 kB] Get:98 http://ftpmaster.internal/ubuntu noble/main armhf gpg armhf 2.4.4-2ubuntu17 [524 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main armhf gpg-agent armhf 2.4.4-2ubuntu17 [235 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main armhf gpgconf armhf 2.4.4-2ubuntu17 [115 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main armhf readline-common all 8.2-4build1 [56.5 kB] Get:102 http://ftpmaster.internal/ubuntu noble/main armhf libncursesw6 armhf 6.4+20240113-1ubuntu2 [119 kB] Get:103 http://ftpmaster.internal/ubuntu noble/main armhf libtinfo6 armhf 6.4+20240113-1ubuntu2 [90.8 kB] Get:104 http://ftpmaster.internal/ubuntu noble/main armhf libreadline8t64 armhf 8.2-4build1 [129 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main armhf pinentry-curses armhf 1.2.1-3ubuntu5 [36.7 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main armhf init-system-helpers all 1.66ubuntu1 [39.4 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main armhf libnpth0t64 armhf 1.6-3.1build1 [6998 B] Get:108 http://ftpmaster.internal/ubuntu noble/main armhf gpgv armhf 2.4.4-2ubuntu17 [224 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main armhf ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main armhf tar armhf 1.35+dfsg-3build1 [236 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main armhf dpkg armhf 1.22.6ubuntu6 [1230 kB] Get:112 http://ftpmaster.internal/ubuntu noble/main armhf dash armhf 0.5.12-6ubuntu5 [80.8 kB] Get:113 http://ftpmaster.internal/ubuntu noble/main armhf diffutils armhf 1:3.10-1build1 [167 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main armhf findutils armhf 4.9.0-5build1 [293 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main armhf grep armhf 3.11-4build1 [157 kB] Get:116 http://ftpmaster.internal/ubuntu noble/main armhf gzip armhf 1.12-1ubuntu3 [95.8 kB] Get:117 http://ftpmaster.internal/ubuntu noble/main armhf hostname armhf 3.23+nmu2ubuntu2 [10.4 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main armhf login armhf 1:4.13+dfsg1-4ubuntu3 [200 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-bin armhf 6.4+20240113-1ubuntu2 [178 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main armhf sed armhf 4.9-2build1 [190 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main armhf util-linux armhf 2.39.3-9ubuntu6 [1216 kB] Get:122 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-base all 6.4+20240113-1ubuntu2 [25.5 kB] Get:123 http://ftpmaster.internal/ubuntu noble/main armhf sysvinit-utils armhf 3.08-6ubuntu3 [33.8 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main armhf logsave armhf 1.47.0-2.4~exp1ubuntu4 [22.0 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main armhf libext2fs2t64 armhf 1.47.0-2.4~exp1ubuntu4 [202 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main armhf e2fsprogs armhf 1.47.0-2.4~exp1ubuntu4 [571 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main armhf optipng armhf 0.7.8+ds-1build2 [109 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main armhf libpng16-16t64 armhf 1.6.43-5build1 [166 kB] Get:129 http://ftpmaster.internal/ubuntu noble/main armhf init armhf 1.66ubuntu1 [6186 B] Get:130 http://ftpmaster.internal/ubuntu noble/main armhf libsmartcols1 armhf 2.39.3-9ubuntu6 [117 kB] Get:131 http://ftpmaster.internal/ubuntu noble/main armhf uuid-runtime armhf 2.39.3-9ubuntu6 [41.8 kB] Get:132 http://ftpmaster.internal/ubuntu noble/main armhf libattr1 armhf 1:2.5.2-1build1 [10.2 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main armhf libmd0 armhf 1.1.0-2build1 [23.0 kB] Get:134 http://ftpmaster.internal/ubuntu noble/main armhf libpam-runtime all 1.5.3-5ubuntu5 [40.8 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage-common all 3.5-1build5 [10.1 kB] Get:136 http://ftpmaster.internal/ubuntu noble/main armhf libsepol2 armhf 3.5-2build1 [263 kB] Get:137 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage2 armhf 3.5-1build5 [84.5 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main armhf passwd armhf 1:4.13+dfsg1-4ubuntu3 [817 kB] Get:139 http://ftpmaster.internal/ubuntu noble/main armhf libproc2-0 armhf 2:4.0.4-4ubuntu3 [49.0 kB] Get:140 http://ftpmaster.internal/ubuntu noble/main armhf libss2 armhf 1.47.0-2.4~exp1ubuntu4 [14.7 kB] Get:141 http://ftpmaster.internal/ubuntu noble/main armhf mawk armhf 1.3.4.20240123-1build1 [115 kB] Get:142 http://ftpmaster.internal/ubuntu noble/main armhf procps armhf 2:4.0.4-4ubuntu3 [700 kB] Get:143 http://ftpmaster.internal/ubuntu noble/main armhf sensible-utils all 0.0.22 [22.5 kB] Get:144 http://ftpmaster.internal/ubuntu noble/main armhf ca-certificates all 20240203 [159 kB] Get:145 http://ftpmaster.internal/ubuntu noble/main armhf krb5-locales all 1.20.1-6ubuntu2 [13.8 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main armhf tzdata all 2024a-2ubuntu1 [273 kB] Get:147 http://ftpmaster.internal/ubuntu noble/main armhf bash-completion all 1:2.11-8 [180 kB] Get:148 http://ftpmaster.internal/ubuntu noble/main armhf bsdextrautils armhf 2.39.3-9ubuntu6 [78.7 kB] Get:149 http://ftpmaster.internal/ubuntu noble/main armhf libgpm2 armhf 1.20.7-11 [13.6 kB] Get:150 http://ftpmaster.internal/ubuntu noble/main armhf libip4tc2 armhf 1.8.10-3ubuntu2 [21.3 kB] Get:151 http://ftpmaster.internal/ubuntu noble/main armhf libjansson4 armhf 2.14-2build2 [28.2 kB] Get:152 http://ftpmaster.internal/ubuntu noble/main armhf psmisc armhf 23.7-1build1 [176 kB] Get:153 http://ftpmaster.internal/ubuntu noble/main armhf xz-utils armhf 5.6.1+really5.4.5-1 [267 kB] Get:154 http://ftpmaster.internal/ubuntu noble/main armhf advancecomp armhf 2.5-1build1 [198 kB] Get:155 http://ftpmaster.internal/ubuntu noble/main armhf libctf0 armhf 2.42-4ubuntu2 [87.7 kB] Get:156 http://ftpmaster.internal/ubuntu noble/main armhf libctf-nobfd0 armhf 2.42-4ubuntu2 [88.0 kB] Get:157 http://ftpmaster.internal/ubuntu noble/main armhf binutils-arm-linux-gnueabihf armhf 2.42-4ubuntu2 [2925 kB] Get:158 http://ftpmaster.internal/ubuntu noble/main armhf libbinutils armhf 2.42-4ubuntu2 [460 kB] Get:159 http://ftpmaster.internal/ubuntu noble/main armhf binutils armhf 2.42-4ubuntu2 [3072 B] Get:160 http://ftpmaster.internal/ubuntu noble/main armhf binutils-common armhf 2.42-4ubuntu2 [217 kB] Get:161 http://ftpmaster.internal/ubuntu noble/main armhf libsframe1 armhf 2.42-4ubuntu2 [13.1 kB] Get:162 http://ftpmaster.internal/ubuntu noble/main armhf libubsan1 armhf 14-20240412-0ubuntu1 [1154 kB] Get:163 http://ftpmaster.internal/ubuntu noble/main armhf libgomp1 armhf 14-20240412-0ubuntu1 [125 kB] Get:164 http://ftpmaster.internal/ubuntu noble/main armhf libatomic1 armhf 14-20240412-0ubuntu1 [7816 B] Get:165 http://ftpmaster.internal/ubuntu noble/main armhf libasan8 armhf 14-20240412-0ubuntu1 [2942 kB] Get:166 http://ftpmaster.internal/ubuntu noble/main armhf g++-13 armhf 13.2.0-23ubuntu4 [14.5 kB] Get:167 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13 armhf 13.2.0-23ubuntu4 [453 kB] Get:168 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++-13-dev armhf 13.2.0-23ubuntu4 [2456 kB] Get:169 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-13-dev armhf 13.2.0-23ubuntu4 [899 kB] Get:170 http://ftpmaster.internal/ubuntu noble/main armhf libcc1-0 armhf 14-20240412-0ubuntu1 [39.0 kB] Get:171 http://ftpmaster.internal/ubuntu noble/main armhf cpp-13 armhf 13.2.0-23ubuntu4 [1034 B] Get:172 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13-base armhf 13.2.0-23ubuntu4 [48.9 kB] Get:173 http://ftpmaster.internal/ubuntu noble/main armhf libisl23 armhf 0.26-3build1 [544 kB] Get:174 http://ftpmaster.internal/ubuntu noble/main armhf libmpfr6 armhf 4.2.1-1build1 [229 kB] Get:175 http://ftpmaster.internal/ubuntu noble/main armhf libmpc3 armhf 1.3.1-1build1 [46.7 kB] Get:176 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu4 [16.9 MB] Get:177 http://ftpmaster.internal/ubuntu noble/main armhf g++-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu4 [9941 kB] Get:178 http://ftpmaster.internal/ubuntu noble/main armhf cpp-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu4 [8759 kB] Get:179 http://ftpmaster.internal/ubuntu noble/main armhf g++ armhf 4:13.2.0-7ubuntu1 [1090 B] Get:180 http://ftpmaster.internal/ubuntu noble/main armhf gcc armhf 4:13.2.0-7ubuntu1 [5022 B] Get:181 http://ftpmaster.internal/ubuntu noble/main armhf cpp armhf 4:13.2.0-7ubuntu1 [22.4 kB] Get:182 http://ftpmaster.internal/ubuntu noble/main armhf cpp-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [5320 B] Get:183 http://ftpmaster.internal/ubuntu noble/main armhf gcc-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [1220 B] Get:184 http://ftpmaster.internal/ubuntu noble/main armhf g++-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [966 B] Get:185 http://ftpmaster.internal/ubuntu noble/main armhf dpkg-dev all 1.22.6ubuntu6 [1074 kB] Get:186 http://ftpmaster.internal/ubuntu noble/main armhf libdpkg-perl all 1.22.6ubuntu6 [268 kB] Get:187 http://ftpmaster.internal/ubuntu noble/main armhf patch armhf 2.7.6-7build3 [110 kB] Get:188 http://ftpmaster.internal/ubuntu noble/main armhf make armhf 4.3-4.1build2 [162 kB] Get:189 http://ftpmaster.internal/ubuntu noble/main armhf lto-disabled-list all 47 [12.4 kB] Get:190 http://ftpmaster.internal/ubuntu noble/main armhf libfakeroot armhf 1.33-1 [28.7 kB] Get:191 http://ftpmaster.internal/ubuntu noble/main armhf fakeroot armhf 1.33-1 [68.6 kB] Get:192 http://ftpmaster.internal/ubuntu noble/main armhf liblockfile-bin armhf 1.17-1build3 [10.5 kB] Get:193 http://ftpmaster.internal/ubuntu noble/main armhf liblockfile1 armhf 1.17-1build3 [6208 B] Get:194 http://ftpmaster.internal/ubuntu noble/main armhf lockfile-progs armhf 0.1.19build2 [8062 B] Preconfiguring packages ... 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(both '/usr/bin/bzcat' and '/usr/bin/bzip2') dpkg: warning: old file '/bin/bzcat' is the same as several new files! (both '/usr/bin/bunzip2' and '/usr/bin/bzcat') dpkg: warning: old file '/bin/bzcat' is the same as several new files! (both '/usr/bin/bzcat' and '/usr/bin/bzip2') dpkg: warning: old file '/bin/bunzip2' is the same as several new files! (both '/usr/bin/bunzip2' and '/usr/bin/bzcat') dpkg: warning: old file '/bin/bunzip2' is the same as several new files! (both '/usr/bin/bzcat' and '/usr/bin/bzip2') Preparing to unpack .../libbz2-1.0_1.0.8-5.1_armhf.deb ... Unpacking libbz2-1.0:armhf (1.0.8-5.1) over (1.0.8-5build1) ... Setting up libbz2-1.0:armhf (1.0.8-5.1) ... (Reading database ... 14953 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.3.dfsg-3.1ubuntu2_armhf.deb ... Unpacking zlib1g:armhf (1:1.3.dfsg-3.1ubuntu2) over (1:1.2.13.dfsg-1ubuntu5) ... Setting up zlib1g:armhf (1:1.3.dfsg-3.1ubuntu2) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.1build1) ... Preparing to unpack .../5-linux-libc-dev_6.8.0-31.31_armhf.deb ... Unpacking linux-libc-dev:armhf (6.8.0-31.31) over (6.5.0-9.9) ... Selecting previously unselected package gcc-14-base:armhf. Preparing to unpack .../6-gcc-14-base_14-20240412-0ubuntu1_armhf.deb ... Unpacking gcc-14-base:armhf (14-20240412-0ubuntu1) ... Setting up gcc-14-base:armhf (14-20240412-0ubuntu1) ... (Reading database ... 14977 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14-20240412-0ubuntu1_armhf.deb ... Unpacking libgcc-s1:armhf (14-20240412-0ubuntu1) over (13.2.0-4ubuntu3) ... Setting up libgcc-s1:armhf (14-20240412-0ubuntu1) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4build1) ... Preparing to unpack .../pinentry-curses_1.2.1-3ubuntu5_armhf.deb ... Unpacking pinentry-curses (1.2.1-3ubuntu5) over (1.2.1-1ubuntu1) ... Preparing to unpack .../init-system-helpers_1.66ubuntu1_all.deb ... Unpacking init-system-helpers (1.66ubuntu1) over (1.65.2ubuntu1) ... Setting up init-system-helpers (1.66ubuntu1) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2 to /lib/arm-linux-gnueabihf/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2.3 to /lib/arm-linux-gnueabihf/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2 to /lib/arm-linux-gnueabihf/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2.4 to /lib/arm-linux-gnueabihf/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu4) ... Setting up libcom-err2:armhf (1.47.0-2.4~exp1ubuntu4) ... Setting up libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu4) ... (Reading database ... 14977 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu4_armhf.deb ... 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Setting up libgdbm-compat4t64:armhf (1.23-5.1build1) ... Setting up psmisc (23.7-1build1) ... Setting up libtirpc-common (1.3.4+ds-1.1build1) ... Setting up libsqlite3-0:armhf (3.45.1-1ubuntu2) ... Setting up binutils-common:armhf (2.42-4ubuntu2) ... Setting up linux-libc-dev:armhf (6.8.0-31.31) ... Setting up libctf-nobfd0:armhf (2.42-4ubuntu2) ... Setting up krb5-locales (1.20.1-6ubuntu2) ... Setting up libgomp1:armhf (14-20240412-0ubuntu1) ... Setting up bzip2 (1.0.8-5.1) ... Setting up libsframe1:armhf (2.42-4ubuntu2) ... Setting up libfakeroot:armhf (1.33-1) ... Setting up libjansson4:armhf (2.14-2build2) ... Setting up libkrb5support0:armhf (1.20.1-6ubuntu2) ... Setting up tzdata (2024a-2ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Mon May 13 08:04:39 UTC 2024. Universal Time is now: Mon May 13 08:04:39 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.33-1) ... Setting up rpcsvc-proto (1.4.2-0ubuntu7) ... Setting up gcc-13-base:armhf (13.2.0-23ubuntu4) ... Setting up make (4.3-4.1build2) ... Setting up libmpfr6:armhf (4.2.1-1build1) ... Setting up bash-completion (1:2.11-8) ... Setting up xz-utils (5.6.1+really5.4.5-1) ... Setting up perl-modules-5.38 (5.38.2-3.2build2) ... Setting up libproc2-0:armhf (2:4.0.4-4ubuntu3) ... Setting up libpng16-16t64:armhf (1.6.43-5build1) ... Setting up libmpc3:armhf (1.3.1-1build1) ... Setting up libatomic1:armhf (14-20240412-0ubuntu1) ... Setting up patch (2.7.6-7build3) ... Setting up libss2:armhf (1.47.0-2.4~exp1ubuntu4) ... Setting up libncursesw6:armhf (6.4+20240113-1ubuntu2) ... Setting up libk5crypto3:armhf (1.20.1-6ubuntu2) ... Setting up logsave (1.47.0-2.4~exp1ubuntu4) ... Setting up libdb5.3t64:armhf (5.3.28+dfsg2-7) ... Setting up libubsan1:armhf (14-20240412-0ubuntu1) ... Setting up advancecomp (2.5-1build1) ... Setting up sensible-utils (0.0.22) ... Setting up uuid-runtime (2.39.3-9ubuntu6) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of restart. Setting up libcrypt-dev:armhf (1:4.4.36-4build1) ... Setting up libasan8:armhf (14-20240412-0ubuntu1) ... Setting up procps (2:4.0.4-4ubuntu3) ... Installing new version of config file /etc/sysctl.conf ... Setting up mawk (1.3.4.20240123-1build1) ... Setting up libkrb5-3:armhf (1.20.1-6ubuntu2) ... Setting up liblockfile1:armhf (1.17-1build3) ... Setting up libperl5.38t64:armhf (5.38.2-3.2build2) ... Setting up libbinutils:armhf (2.42-4ubuntu2) ... Setting up libisl23:armhf (0.26-3build1) ... Setting up libc-dev-bin (2.39-0ubuntu8) ... Setting up openssl (3.0.13-0ubuntu3) ... Setting up libgpg-error-l10n (1.47-3build2) ... Setting up readline-common (8.2-4build1) ... Setting up libcc1-0:armhf (14-20240412-0ubuntu1) ... Setting up liblocale-gettext-perl (1.07-6ubuntu5) ... Setting up libctf0:armhf (2.42-4ubuntu2) ... Setting up pinentry-curses (1.2.1-3ubuntu5) ... Setting up apt-utils (2.7.14build2) ... Setting up cpp-13-arm-linux-gnueabihf (13.2.0-23ubuntu4) ... Setting up debconf-i18n (1.5.86ubuntu1) ... Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu4) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 14 added, 5 removed; done. Setting up perl (5.38.2-3.2build2) ... Setting up optipng (0.7.8+ds-1build2) ... Setting up lockfile-progs (0.1.19build2) ... Setting up libgssapi-krb5-2:armhf (1.20.1-6ubuntu2) ... Setting up libdpkg-perl (1.22.6ubuntu6) ... Setting up libreadline8t64:armhf (8.2-4build1) ... Setting up libgcc-13-dev:armhf (13.2.0-23ubuntu4) ... Setting up gpgconf (2.4.4-2ubuntu17) ... Setting up libc6-dev:armhf (2.39-0ubuntu8) ... Setting up binutils-arm-linux-gnueabihf (2.42-4ubuntu2) ... Setting up gpg (2.4.4-2ubuntu17) ... Setting up cpp-arm-linux-gnueabihf (4:13.2.0-7ubuntu1) ... Setting up libstdc++-13-dev:armhf (13.2.0-23ubuntu4) ... Setting up gpg-agent (2.4.4-2ubuntu17) ... Setting up cpp-13 (13.2.0-23ubuntu4) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.1build1) ... Setting up binutils (2.42-4ubuntu2) ... Setting up gcc-13-arm-linux-gnueabihf (13.2.0-23ubuntu4) ... Setting up dpkg-dev (1.22.6ubuntu6) ... Setting up libtirpc-dev:armhf (1.3.4+ds-1.1build1) ... Setting up gcc-13 (13.2.0-23ubuntu4) ... Setting up cpp (4:13.2.0-7ubuntu1) ... Setting up libnsl2:armhf (1.3.0-3build3) ... Setting up gcc-arm-linux-gnueabihf (4:13.2.0-7ubuntu1) ... Setting up g++-13-arm-linux-gnueabihf (13.2.0-23ubuntu4) ... Setting up g++-arm-linux-gnueabihf (4:13.2.0-7ubuntu1) ... Setting up g++-13 (13.2.0-23ubuntu4) ... Setting up libnss-nisplus:armhf (1.3-5build1) ... Setting up gcc (4:13.2.0-7ubuntu1) ... Setting up libnss-nis:armhf (3.1-0ubuntu7) ... Setting up g++ (4:13.2.0-7ubuntu1) ... Setting up libnsl-dev:armhf (1.3.0-3build3) ... Processing triggers for libc-bin (2.39-0ubuntu8) ... Processing triggers for debianutils (5.17build1) ... (Reading database ... 15019 files and directories currently installed.) Purging configuration files for libssl3:armhf (3.0.10-1ubuntu2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-28178183 armhf noble -c chroot:build-PACKAGEBUILD-28178183 --arch=armhf --dist=noble --nolog gerris_20131206+dfsg-19.1build2.dsc Initiating build PACKAGEBUILD-28178183 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-177-generic #197-Ubuntu SMP Thu Mar 28 22:51:24 UTC 2024 armv7l sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos03-arm64-031.buildd +==============================================================================+ | gerris 20131206+dfsg-19.1build2 (armhf) Mon, 13 May 2024 08:04:47 +0000 | +==============================================================================+ Package: gerris Version: 20131206+dfsg-19.1build2 Source Version: 20131206+dfsg-19.1build2 Distribution: noble Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-28178183/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/gerris-ELmmwS/resolver-VzvqIh' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- gerris_20131206+dfsg-19.1build2.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/gerris-ELmmwS/gerris-20131206+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/gerris-ELmmwS' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python3, build-essential, fakeroot Filtered Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python3, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [460 B] Get:5 copy:/<>/apt_archive ./ Packages [544 B] Fetched 1961 B in 0s (83.4 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion ca-certificates debconf-i18n krb5-locales libgpg-error-l10n libgpm2 libip4tc2 liblocale-gettext-perl libnsl-dev libnsl2 libnss-nis libnss-nisplus libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libtirpc-common libtirpc-dev libtirpc3t64 libunistring2 openssl perl-modules-5.36 psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev debhelper debugedit dh-autoreconf dh-exec dh-strip-nondeterminism dwz file gettext gettext-base gfortran gfortran-13 gfortran-13-arm-linux-gnueabihf gfortran-arm-linux-gnueabihf groff-base hdf5-helpers ibverbs-providers icu-devtools intltool-debian libaec-dev libaec0 libarchive-zip-perl libblkid-dev libbrotli1 libbsd0 libcbor0.10 libcurl3t64-gnutls libcurl4-gnutls-dev libcurl4t64 libdebhelper-perl libdw1t64 libedit2 libelf1t64 libevent-2.1-7t64 libevent-core-2.1-7t64 libevent-dev libevent-extra-2.1-7t64 libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libfabric1 libffi-dev libfido2-1 libfile-stripnondeterminism-perl libgfortran-13-dev libgfortran5 libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libgsl-dev libgsl27 libgslcblas0 libgts-0.7-5t64 libgts-bin libgts-dev libhdf5-103-1t64 libhdf5-cpp-103-1t64 libhdf5-dev libhdf5-fortran-102t64 libhdf5-hl-100t64 libhdf5-hl-cpp-100t64 libhdf5-hl-fortran-100t64 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu-dev libicu74 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui libldap2 libltdl-dev libltdl7 libmagic-mgc libmagic1t64 libmount-dev libmunge2 libnetcdf-dev libnetcdf19t64 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3t64 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpipeline1 libpkgconf3 libpmix-dev libpmix2t64 libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib librdmacm1t64 librtmp1 libsasl2-2 libsasl2-modules-db libselinux1-dev libsepol-dev libssh-4 libssl-dev libsub-override-perl libsz2 libtool libuchardet0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxml2-dev libxnvctrl0 m4 man-db media-types mpi-default-dev netbase ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkgconf pkgconf-bin po-debconf python3 python3-minimal python3-packaging python3.12 python3.12-minimal uuid-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-13-doc libcoarrays-dev groff libcurl4-doc libgnutls28-dev libidn-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev low-memory-monitor gir1.2-glib-2.0-dev libglib2.0-doc libgdk-pixbuf2.0-bin libxml2-utils gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html libgts-doc libhdf5-doc icu-doc libjs-jquery-ui-docs libtool-doc netcdf-bin netcdf-doc openmpi-doc pciutils libssl-doc gcj-jdk m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl python3-doc python3-tk python3-venv python3.12-venv python3.12-doc binfmt-support Recommended packages: curl | wget | lynx libarchive-cpio-perl shared-mime-info xdg-user-dirs javascript-common libldap-common libcoarrays-openmpi-dev publicsuffix libsasl2-modules xauth libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev debhelper debugedit dh-autoreconf dh-exec dh-strip-nondeterminism dwz file gettext gettext-base gfortran gfortran-13 gfortran-13-arm-linux-gnueabihf gfortran-arm-linux-gnueabihf groff-base hdf5-helpers ibverbs-providers icu-devtools intltool-debian libaec-dev libaec0 libarchive-zip-perl libblkid-dev libbrotli1 libbsd0 libcbor0.10 libcurl3t64-gnutls libcurl4-gnutls-dev libcurl4t64 libdebhelper-perl libdw1t64 libedit2 libelf1t64 libevent-2.1-7t64 libevent-core-2.1-7t64 libevent-dev libevent-extra-2.1-7t64 libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libfabric1 libffi-dev libfido2-1 libfile-stripnondeterminism-perl libgfortran-13-dev libgfortran5 libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libgsl-dev libgsl27 libgslcblas0 libgts-0.7-5t64 libgts-bin libgts-dev libhdf5-103-1t64 libhdf5-cpp-103-1t64 libhdf5-dev libhdf5-fortran-102t64 libhdf5-hl-100t64 libhdf5-hl-cpp-100t64 libhdf5-hl-fortran-100t64 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu-dev libicu74 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui libldap2 libltdl-dev libltdl7 libmagic-mgc libmagic1t64 libmount-dev libmunge2 libnetcdf-dev libnetcdf19t64 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3t64 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpipeline1 libpkgconf3 libpmix-dev libpmix2t64 libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib librdmacm1t64 librtmp1 libsasl2-2 libsasl2-modules-db libselinux1-dev libsepol-dev libssh-4 libssl-dev libsub-override-perl libsz2 libtool libuchardet0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxml2-dev libxnvctrl0 m4 man-db media-types mpi-default-dev netbase ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkgconf pkgconf-bin po-debconf python3 python3-minimal python3-packaging python3.12 python3.12-minimal sbuild-build-depends-main-dummy uuid-dev zlib1g-dev 0 upgraded, 154 newly installed, 0 to remove and 0 not upgraded. Need to get 76.8 MB of archives. After this operation, 253 MB of additional disk space will be used. 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all 13.14.1ubuntu5 [869 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main armhf libgfortran5 armhf 14-20240412-0ubuntu1 [316 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main armhf libgfortran-13-dev armhf 13.2.0-23ubuntu4 [359 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main armhf gfortran-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu4 [9182 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main armhf gfortran-13 armhf 13.2.0-23ubuntu4 [11.7 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf gfortran-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [1024 B] Get:67 http://ftpmaster.internal/ubuntu noble/main armhf gfortran armhf 4:13.2.0-7ubuntu1 [1166 B] Get:68 http://ftpmaster.internal/ubuntu noble/universe armhf hdf5-helpers armhf 1.10.10+repack-3.1ubuntu4 [15.8 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf icu-devtools armhf 74.2-1ubuntu3 [201 kB] Get:70 http://ftpmaster.internal/ubuntu noble/universe armhf libaec0 armhf 1.1.2-1build1 [20.9 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main armhf libbrotli1 armhf 1.1.0-2build2 [319 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-5ubuntu3 [19.2 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-2 armhf 2.1.28+dfsg1-5ubuntu3 [49.7 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main armhf libldap2 armhf 2.6.7+dfsg-1~exp1ubuntu8 [172 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build7 [51.3 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main armhf libssh-4 armhf 0.10.6-2build2 [169 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main armhf libcurl3t64-gnutls armhf 8.5.0-2ubuntu10 [290 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main armhf libcurl4-gnutls-dev armhf 8.5.0-2ubuntu10 [408 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf libcurl4t64 armhf 8.5.0-2ubuntu10 [296 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-9ubuntu2 [127 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main armhf libevent-core-2.1-7t64 armhf 2.1.12-stable-9ubuntu2 [82.6 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main armhf libevent-extra-2.1-7t64 armhf 2.1.12-stable-9ubuntu2 [56.1 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main armhf libevent-pthreads-2.1-7t64 armhf 2.1.12-stable-9ubuntu2 [7540 B] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libevent-openssl-2.1-7t64 armhf 2.1.12-stable-9ubuntu2 [13.0 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main armhf libevent-dev armhf 2.1.12-stable-9ubuntu2 [264 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf librdmacm1t64 armhf 50.0-2build2 [63.0 kB] Get:87 http://ftpmaster.internal/ubuntu noble/universe armhf libfabric1 armhf 1.17.0-3build2 [419 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main armhf libgirepository-2.0-0 armhf 2.80.0-6ubuntu1 [98.3 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main armhf libglib2.0-bin armhf 2.80.0-6ubuntu1 [91.8 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libffi-dev armhf 3.4.6-1build1 [57.1 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main armhf python3-packaging all 24.0-1 [41.1 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main armhf libglib2.0-dev-bin armhf 2.80.0-6ubuntu1 [139 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main armhf uuid-dev armhf 2.39.3-9ubuntu6 [32.2 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main armhf libblkid-dev armhf 2.39.3-9ubuntu6 [195 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main armhf libsepol-dev armhf 3.5-2build1 [360 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-16-0 armhf 10.42-4ubuntu2 [180 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-32-0 armhf 10.42-4ubuntu2 [171 kB] Get:98 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-posix3 armhf 10.42-4ubuntu2 [6088 B] Get:99 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-dev armhf 10.42-4ubuntu2 [664 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main armhf libselinux1-dev armhf 3.5-2ubuntu2 [158 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main armhf libmount-dev armhf 2.39.3-9ubuntu6 [14.9 kB] Get:102 http://ftpmaster.internal/ubuntu noble/main armhf libpkgconf3 armhf 1.8.1-2build1 [26.3 kB] Get:103 http://ftpmaster.internal/ubuntu noble/main armhf pkgconf-bin armhf 1.8.1-2build1 [20.7 kB] Get:104 http://ftpmaster.internal/ubuntu noble/main armhf pkgconf armhf 1.8.1-2build1 [16.8 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1ubuntu2 [880 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main armhf libglib2.0-dev armhf 2.80.0-6ubuntu1 [1771 kB] Get:107 http://ftpmaster.internal/ubuntu noble/universe armhf libgslcblas0 armhf 2.7.1+dfsg-6ubuntu2 [77.8 kB] Get:108 http://ftpmaster.internal/ubuntu noble/universe armhf libgsl27 armhf 2.7.1+dfsg-6ubuntu2 [827 kB] Get:109 http://ftpmaster.internal/ubuntu noble/universe armhf libgsl-dev armhf 2.7.1+dfsg-6ubuntu2 [1077 kB] Get:110 http://ftpmaster.internal/ubuntu noble/universe armhf libgts-0.7-5t64 armhf 0.7.6+darcs121130-5.2build1 [139 kB] Get:111 http://ftpmaster.internal/ubuntu noble/universe armhf libgts-bin armhf 0.7.6+darcs121130-5.2build1 [42.1 kB] Get:112 http://ftpmaster.internal/ubuntu noble/universe armhf libgts-dev armhf 0.7.6+darcs121130-5.2build1 [174 kB] Get:113 http://ftpmaster.internal/ubuntu noble/universe armhf libsz2 armhf 1.1.2-1build1 [5324 B] Get:114 http://ftpmaster.internal/ubuntu noble/universe armhf libhdf5-103-1t64 armhf 1.10.10+repack-3.1ubuntu4 [1337 kB] Get:115 http://ftpmaster.internal/ubuntu noble/universe armhf libhdf5-cpp-103-1t64 armhf 1.10.10+repack-3.1ubuntu4 [125 kB] Get:116 http://ftpmaster.internal/ubuntu noble/universe armhf libhdf5-fortran-102t64 armhf 1.10.10+repack-3.1ubuntu4 [74.2 kB] Get:117 http://ftpmaster.internal/ubuntu noble/universe armhf libhdf5-hl-100t64 armhf 1.10.10+repack-3.1ubuntu4 [54.8 kB] Get:118 http://ftpmaster.internal/ubuntu noble/universe armhf libhdf5-hl-fortran-100t64 armhf 1.10.10+repack-3.1ubuntu4 [25.7 kB] Get:119 http://ftpmaster.internal/ubuntu noble/universe armhf libhdf5-hl-cpp-100t64 armhf 1.10.10+repack-3.1ubuntu4 [10.6 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu2 [125 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-turbo8-dev armhf 2.1.5-2ubuntu2 [262 kB] Get:122 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] Get:123 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg8-dev armhf 8c-2ubuntu11 [1484 B] Get:124 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-dev armhf 8c-2ubuntu11 [1482 B] Get:125 http://ftpmaster.internal/ubuntu noble/universe armhf libaec-dev armhf 1.1.2-1build1 [17.2 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main armhf libssl-dev armhf 3.0.13-0ubuntu3 [2084 kB] Get:127 http://ftpmaster.internal/ubuntu noble/universe armhf libhdf5-dev armhf 1.10.10+repack-3.1ubuntu4 [2844 kB] Get:128 http://ftpmaster.internal/ubuntu noble/universe armhf libhwloc15 armhf 2.10.0-1build1 [146 kB] Get:129 http://ftpmaster.internal/ubuntu noble/main armhf libicu-dev armhf 74.2-1ubuntu3 [11.6 MB] Get:130 http://ftpmaster.internal/ubuntu noble/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:131 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] Get:132 http://ftpmaster.internal/ubuntu noble/main armhf libltdl7 armhf 2.4.7-7build1 [37.6 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main armhf libltdl-dev armhf 2.4.7-7build1 [166 kB] Get:134 http://ftpmaster.internal/ubuntu noble/universe armhf libnetcdf19t64 armhf 1:4.9.2-5ubuntu4 [422 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main armhf libxml2-dev armhf 2.9.14+dfsg-1.3ubuntu3 [733 kB] Get:136 http://ftpmaster.internal/ubuntu noble/universe armhf libnetcdf-dev armhf 1:4.9.2-5ubuntu4 [58.0 kB] Get:137 http://ftpmaster.internal/ubuntu noble/main armhf libnl-3-dev armhf 3.7.0-0.3build1 [94.5 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main armhf libnl-route-3-dev armhf 3.7.0-0.3build1 [196 kB] Get:139 http://ftpmaster.internal/ubuntu noble/universe armhf libmunge2 armhf 0.5.15-4build1 [17.1 kB] Get:140 http://ftpmaster.internal/ubuntu noble/main armhf libpciaccess0 armhf 0.17-3build1 [16.3 kB] Get:141 http://ftpmaster.internal/ubuntu noble/main armhf libxnvctrl0 armhf 510.47.03-0ubuntu4 [11.6 kB] Get:142 http://ftpmaster.internal/ubuntu noble/universe armhf ocl-icd-libopencl1 armhf 2.3.2-1build1 [34.5 kB] Get:143 http://ftpmaster.internal/ubuntu noble/universe armhf libhwloc-plugins armhf 2.10.0-1build1 [13.7 kB] Get:144 http://ftpmaster.internal/ubuntu noble/universe armhf libpmix2t64 armhf 5.0.1-4.1build1 [616 kB] Get:145 http://ftpmaster.internal/ubuntu noble/universe armhf libopenmpi3t64 armhf 4.1.6-7ubuntu2 [2041 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main armhf libnuma-dev armhf 2.0.18-1build1 [35.0 kB] Get:147 http://ftpmaster.internal/ubuntu noble/universe armhf libhwloc-dev armhf 2.10.0-1build1 [242 kB] Get:148 http://ftpmaster.internal/ubuntu noble/universe armhf libpmix-dev armhf 5.0.1-4.1build1 [3936 kB] Get:149 http://ftpmaster.internal/ubuntu noble/universe armhf openmpi-common all 4.1.6-7ubuntu2 [170 kB] Get:150 http://ftpmaster.internal/ubuntu noble/universe armhf openmpi-bin armhf 4.1.6-7ubuntu2 [83.2 kB] Get:151 http://ftpmaster.internal/ubuntu noble/main armhf dh-exec armhf 0.29build1 [25.1 kB] Get:152 http://ftpmaster.internal/ubuntu noble/main armhf libibverbs-dev armhf 50.0-2build2 [201 kB] Get:153 http://ftpmaster.internal/ubuntu noble/universe armhf libopenmpi-dev armhf 4.1.6-7ubuntu2 [816 kB] Get:154 http://ftpmaster.internal/ubuntu noble/universe armhf mpi-default-dev armhf 1.15build1 [3154 B] Preconfiguring packages ... Fetched 76.8 MB in 4s (19.1 MB/s) Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... 15019 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.3-1_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.3-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.1-2build1_armhf.deb ... Unpacking libexpat1:armhf (2.6.1-2build1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.3-1_armhf.deb ... Unpacking python3.12-minimal (3.12.3-1) ... Setting up libpython3.12-minimal:armhf (3.12.3-1) ... Setting up libexpat1:armhf (2.6.1-2build1) ... Setting up python3.12-minimal (3.12.3-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 15337 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.12.3-0ubuntu1_armhf.deb ... 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Setting up libffi-dev:armhf (3.4.6-1build1) ... Setting up libpcre2-16-0:armhf (10.42-4ubuntu2) ... Setting up libaec0:armhf (1.1.2-1build1) ... Setting up libelf1t64:armhf (0.190-1.1build4) ... Setting up libdw1t64:armhf (0.190-1.1build4) ... Setting up libsasl2-modules-db:armhf (2.1.28+dfsg1-5ubuntu3) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:armhf (10.42-4ubuntu2) ... Setting up libglib2.0-0t64:armhf (2.80.0-6ubuntu1) ... No schema files found: doing nothing. Setting up libglib2.0-data (2.80.0-6ubuntu1) ... Setting up libpkgconf3:armhf (1.8.1-2build1) ... Setting up libmunge2:armhf (0.5.15-4build1) ... Setting up libx11-data (2:1.8.7-1build1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2build7) ... Setting up uuid-dev:armhf (2.39.3-9ubuntu6) ... Setting up libssl-dev:armhf (3.0.13-0ubuntu3) ... Setting up libhwloc15:armhf (2.10.0-1build1) ... Setting up autopoint (0.21-14ubuntu2) ... Setting up libsepol-dev:armhf (3.5-2build1) ... 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Setting up libevent-core-2.1-7t64:armhf (2.1.12-stable-9ubuntu2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:armhf (1.14.0-1build3) ... Setting up libgfortran-13-dev:armhf (13.2.0-23ubuntu4) ... Setting up libbsd0:armhf (0.12.1-1build1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3ubuntu3) ... Setting up libldap2:armhf (2.6.7+dfsg-1~exp1ubuntu8) ... Setting up libsz2:armhf (1.1.2-1build1) ... Setting up libjpeg8:armhf (8c-2ubuntu11) ... Setting up automake (1:1.16.5-1.3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gfortran-13-arm-linux-gnueabihf (13.2.0-23ubuntu4) ... Setting up libblkid-dev:armhf (2.39.3-9ubuntu6) ... Setting up libgts-bin (0.7.6+darcs121130-5.2build1) ... Setting up libjpeg-turbo8-dev:armhf (2.1.5-2ubuntu2) ... Setting up libxdmcp6:armhf (1:1.1.3-0ubuntu6) ... Setting up libxcb1:armhf (1.15-1ubuntu2) ... Setting up gettext (0.21-14ubuntu2) ... Setting up libgsl-dev (2.7.1+dfsg-6ubuntu2) ... Setting up libpython3.12-stdlib:armhf (3.12.3-1) ... Setting up libpcre2-dev:armhf (10.42-4ubuntu2) ... Setting up libcurl4t64:armhf (8.5.0-2ubuntu10) ... Setting up libtool (2.4.7-7build1) ... Setting up libgirepository-2.0-0:armhf (2.80.0-6ubuntu1) ... Setting up libselinux1-dev:armhf (3.5-2ubuntu2) ... Setting up libevent-pthreads-2.1-7t64:armhf (2.1.12-stable-9ubuntu2) ... Setting up python3.12 (3.12.3-1) ... Setting up libedit2:armhf (3.1-20230828-1build1) ... Setting up libevent-openssl-2.1-7t64:armhf (2.1.12-stable-9ubuntu2) ... Setting up libaec-dev:armhf (1.1.2-1build1) ... Setting up libcurl3t64-gnutls:armhf (8.5.0-2ubuntu10) ... Setting up libglib2.0-bin (2.80.0-6ubuntu1) ... Setting up libcurl4-gnutls-dev:armhf (8.5.0-2ubuntu10) ... Setting up gfortran-arm-linux-gnueabihf (4:13.2.0-7ubuntu1) ... Setting up pkgconf:armhf (1.8.1-2build1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:armhf (2.0.18-1build1) ... Setting up libnl-route-3-200:armhf (3.7.0-0.3build1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:armhf (2.4.7-7build1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up gfortran-13 (13.2.0-23ubuntu4) ... Setting up icu-devtools (74.2-1ubuntu3) ... Setting up libevent-extra-2.1-7t64:armhf (2.1.12-stable-9ubuntu2) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libnl-3-dev:armhf (3.7.0-0.3build1) ... Setting up groff-base (1.23.0-3build2) ... Setting up libx11-6:armhf (2:1.8.7-1build1) ... Setting up libhwloc-dev:armhf (2.10.0-1build1) ... Setting up libjpeg8-dev:armhf (8c-2ubuntu11) ... Setting up libhdf5-103-1t64:armhf (1.10.10+repack-3.1ubuntu4) ... Setting up libicu-dev:armhf (74.2-1ubuntu3) ... Setting up libmount-dev:armhf (2.39.3-9ubuntu6) ... Setting up libpython3-stdlib:armhf (3.12.3-0ubuntu1) ... Setting up libhdf5-hl-100t64:armhf (1.10.10+repack-3.1ubuntu4) ... Setting up libibverbs1:armhf (50.0-2build2) ... Setting up libnetcdf19t64:armhf (1:4.9.2-5ubuntu4) ... Setting up ibverbs-providers:armhf (50.0-2build2) ... Setting up openssh-client (1:9.6p1-3ubuntu13) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhdf5-cpp-103-1t64:armhf (1.10.10+repack-3.1ubuntu4) ... Setting up libjpeg-dev:armhf (8c-2ubuntu11) ... Setting up libxext6:armhf (2:1.3.4-1build2) ... Setting up libhdf5-fortran-102t64:armhf (1.10.10+repack-3.1ubuntu4) ... Setting up python3 (3.12.3-0ubuntu1) ... Setting up man-db (2.12.0-4build2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /usr/lib/systemd/system/man-db.timer. Setting up gfortran (4:13.2.0-7ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist Setting up libxnvctrl0:armhf (510.47.03-0ubuntu4) ... Setting up libnl-route-3-dev:armhf (3.7.0-0.3build1) ... Setting up libxml2-dev:armhf (2.9.14+dfsg-1.3ubuntu3) ... Setting up python3-packaging (24.0-1) ... Setting up libevent-dev (2.1.12-stable-9ubuntu2) ... Setting up librdmacm1t64:armhf (50.0-2build2) ... Setting up libhdf5-hl-cpp-100t64:armhf (1.10.10+repack-3.1ubuntu4) ... Setting up libfabric1:armhf (1.17.0-3build2) ... Setting up libglib2.0-dev-bin (2.80.0-6ubuntu1) ... Setting up libhdf5-hl-fortran-100t64:armhf (1.10.10+repack-3.1ubuntu4) ... Setting up debhelper (13.14.1ubuntu5) ... Setting up dh-exec (0.29build1) ... Setting up libibverbs-dev:armhf (50.0-2build2) ... Setting up libhwloc-plugins:armhf (2.10.0-1build1) ... Setting up libglib2.0-dev:armhf (2.80.0-6ubuntu1) ... Setting up libhdf5-dev (1.10.10+repack-3.1ubuntu4) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libgts-dev:armhf (0.7.6+darcs121130-5.2build1) ... Setting up libnetcdf-dev (1:4.9.2-5ubuntu4) ... Setting up libpmix2t64:armhf (5.0.1-4.1build1) ... Setting up libopenmpi3t64:armhf (4.1.6-7ubuntu2) ... Setting up libpmix-dev:armhf (5.0.1-4.1build1) ... Setting up openmpi-bin (4.1.6-7ubuntu2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:armhf (4.1.6-7ubuntu2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Setting up mpi-default-dev (1.15build1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for systemd (255.4-1ubuntu8) ... Processing triggers for libc-bin (2.39-0ubuntu8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-177-generic #197-Ubuntu SMP Thu Mar 28 22:51:24 UTC 2024 arm64 (armv7l) Toolchain package versions: binutils_2.42-4ubuntu2 dpkg-dev_1.22.6ubuntu6 g++-13_13.2.0-23ubuntu4 gcc-13_13.2.0-23ubuntu4 libc6-dev_2.39-0ubuntu8 libstdc++-13-dev_13.2.0-23ubuntu4 libstdc++6_14-20240412-0ubuntu1 linux-libc-dev_6.8.0-31.31 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1build1 apt_2.7.14build2 apt-utils_2.7.14build2 autoconf_2.71-3 automake_1:1.16.5-1.3ubuntu1 autopoint_0.21-14ubuntu2 autotools-dev_20220109.1 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libpython3.12-stdlib_3.12.3-1 librdmacm1t64_50.0-2build2 libreadline8t64_8.2-4build1 librtmp1_2.4+20151223.gitfa8646d.1-2build7 libsasl2-2_2.1.28+dfsg1-5ubuntu3 libsasl2-modules-db_2.1.28+dfsg1-5ubuntu3 libseccomp2_2.5.5-1ubuntu3 libselinux1_3.5-2ubuntu2 libselinux1-dev_3.5-2ubuntu2 libsemanage-common_3.5-1build5 libsemanage2_3.5-1build5 libsepol-dev_3.5-2build1 libsepol2_3.5-2build1 libsframe1_2.42-4ubuntu2 libsmartcols1_2.39.3-9ubuntu6 libsqlite3-0_3.45.1-1ubuntu2 libss2_1.47.0-2.4~exp1ubuntu4 libssh-4_0.10.6-2build2 libssl-dev_3.0.13-0ubuntu3 libssl3t64_3.0.13-0ubuntu3 libstdc++-13-dev_13.2.0-23ubuntu4 libstdc++6_14-20240412-0ubuntu1 libsub-override-perl_0.10-1 libsystemd-shared_255.4-1ubuntu8 libsystemd0_255.4-1ubuntu8 libsz2_1.1.2-1build1 libtasn1-6_4.19.0-3build1 libtext-charwidth-perl_0.04-11build3 libtext-iconv-perl_1.7-8build3 libtext-wrapi18n-perl_0.06-10 libtinfo6_6.4+20240113-1ubuntu2 libtirpc-common_1.3.4+ds-1.1build1 libtirpc-dev_1.3.4+ds-1.1build1 libtirpc3t64_1.3.4+ds-1.1build1 libtool_2.4.7-7build1 libubsan1_14-20240412-0ubuntu1 libuchardet0_0.0.8-1build1 libudev1_255.4-1ubuntu8 libunistring2_1.0-2 libunistring5_1.1-2build1 libuuid1_2.39.3-9ubuntu6 libx11-6_2:1.8.7-1build1 libx11-data_2:1.8.7-1build1 libxau6_1:1.0.9-1build6 libxcb1_1.15-1ubuntu2 libxdmcp6_1:1.1.3-0ubuntu6 libxext6_2:1.3.4-1build2 libxml2_2.9.14+dfsg-1.3ubuntu3 libxml2-dev_2.9.14+dfsg-1.3ubuntu3 libxnvctrl0_510.47.03-0ubuntu4 libxxhash0_0.8.2-2build1 libzstd1_1.5.5+dfsg2-2build1 linux-libc-dev_6.8.0-31.31 lockfile-progs_0.1.19build2 login_1:4.13+dfsg1-4ubuntu3 logsave_1.47.0-2.4~exp1ubuntu4 lto-disabled-list_47 m4_1.4.19-4build1 make_4.3-4.1build2 man-db_2.12.0-4build2 mawk_1.3.4.20240123-1build1 media-types_10.1.0 mount_2.39.3-9ubuntu6 mpi-default-dev_1.15build1 ncurses-base_6.4+20240113-1ubuntu2 ncurses-bin_6.4+20240113-1ubuntu2 netbase_6.4 ocl-icd-libopencl1_2.3.2-1build1 openmpi-bin_4.1.6-7ubuntu2 openmpi-common_4.1.6-7ubuntu2 openssh-client_1:9.6p1-3ubuntu13 openssl_3.0.13-0ubuntu3 optipng_0.7.8+ds-1build2 passwd_1:4.13+dfsg1-4ubuntu3 patch_2.7.6-7build3 perl_5.38.2-3.2build2 perl-base_5.38.2-3.2build2 perl-modules-5.36_5.36.0-9ubuntu1 perl-modules-5.38_5.38.2-3.2build2 pinentry-curses_1.2.1-3ubuntu5 pkgbinarymangler_154 pkgconf_1.8.1-2build1 pkgconf-bin_1.8.1-2build1 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3.1 procps_2:4.0.4-4ubuntu3 psmisc_23.7-1build1 python3_3.12.3-0ubuntu1 python3-minimal_3.12.3-0ubuntu1 python3-packaging_24.0-1 python3.12_3.12.3-1 python3.12-minimal_3.12.3-1 readline-common_8.2-4build1 rpcsvc-proto_1.4.2-0ubuntu7 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2build1 sensible-utils_0.0.22 systemd_255.4-1ubuntu8 systemd-dev_255.4-1ubuntu8 systemd-sysv_255.4-1ubuntu8 sysvinit-utils_3.08-6ubuntu3 tar_1.35+dfsg-3build1 tzdata_2024a-2ubuntu1 ubuntu-keyring_2023.11.28.1 util-linux_2.39.3-9ubuntu6 uuid-dev_2.39.3-9ubuntu6 uuid-runtime_2.39.3-9ubuntu6 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg-3.1ubuntu2 zlib1g-dev_1:1.3.dfsg-3.1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: gerris Binary: gerris, libgfs-1.3-2t64, libgfs-dev Architecture: any Version: 20131206+dfsg-19.1build2 Maintainer: Ubuntu Developers Uploaders: Drew Parsons Homepage: http://gfs.sourceforge.net/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/science-team/gerris/ Vcs-Git: https://salsa.debian.org/science-team/gerris.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, mpi-default-bin, mpi-default-dev, pkg-config Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python3 Package-List: gerris deb science optional arch=any libgfs-1.3-2t64 deb devel optional arch=any libgfs-dev deb libdevel optional arch=any Checksums-Sha1: 9f946a30d294165ad0cf1f3f7ab5b385f282d6f5 2834149 gerris_20131206+dfsg.orig.tar.gz c3897cd349c00784deeaae8ce40f480de08e4d3c 27236 gerris_20131206+dfsg-19.1build2.debian.tar.xz Checksums-Sha256: d7d03d3c3252090751bef6fb8252665fc2c95be108998329517e9d4a5aeb1c18 2834149 gerris_20131206+dfsg.orig.tar.gz 216af4fc2718b27803bec30bb70013c8eff1e1c0b866f7b1358969cd19cabd5a 27236 gerris_20131206+dfsg-19.1build2.debian.tar.xz Files: 230cd5311f96d25809c2534d150386b5 2834149 gerris_20131206+dfsg.orig.tar.gz 08e921368de790f1e72acc93593a9a62 27236 gerris_20131206+dfsg-19.1build2.debian.tar.xz Original-Maintainer: Debian Science Maintainers -----BEGIN PGP SIGNATURE----- iQJOBAEBCgA4FiEErEg/aN5yj0PyIC/KVo0w8yGyEz0FAmYI96AaHHN0ZXZlLmxh bmdhc2VrQHVidW50dS5jb20ACgkQVo0w8yGyEz08dQ/+K4o6wG2Xy/O/vq70zAra 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no acceptable signature found dpkg-source: info: extracting gerris in /<> dpkg-source: info: unpacking gerris_20131206+dfsg.orig.tar.gz dpkg-source: info: unpacking gerris_20131206+dfsg-19.1build2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_automake_doc_examples dpkg-source: info: applying 02_fix_makefiles.patch dpkg-source: info: applying 03_build_funct.patch dpkg-source: info: applying 05_reproducible_build.patch dpkg-source: info: applying 05_Port-to-Python-3.patch dpkg-source: info: applying 06_Port-to-MPI-3.0.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-28178183 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-28178183 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-28178183 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package gerris dpkg-buildpackage: info: source version 20131206+dfsg-19.1build2 dpkg-buildpackage: info: source distribution noble dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:773: AM_INIT_AUTOMAKE is expanded from... configure.ac:50: the top level configure.ac:53: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:53: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:1125: AM_CONFIG_HEADER is expanded from... configure.ac:53: the top level configure.ac:117: warning: The macro `AC_LIBTOOL_WIN32_DLL' is obsolete. configure.ac:117: You should run autoupdate. m4/ltoptions.m4:148: AC_LIBTOOL_WIN32_DLL is expanded from... configure.ac:117: the top level configure.ac:117: warning: AC_LIBTOOL_WIN32_DLL: Remove this warning and the call to _LT_SET_OPTION when you configure.ac:117: put the 'win32-dll' option into LT_INIT's first parameter. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... m4/ltoptions.m4:148: AC_LIBTOOL_WIN32_DLL is expanded from... configure.ac:117: the top level configure.ac:118: warning: The macro `AM_PROG_LIBTOOL' is obsolete. configure.ac:118: You should run autoupdate. m4/libtool.m4:101: AM_PROG_LIBTOOL is expanded from... configure.ac:118: the top level configure.ac:143: warning: The macro `AC_ISC_POSIX' is obsolete. configure.ac:143: You should run autoupdate. ./lib/autoconf/specific.m4:550: AC_ISC_POSIX is expanded from... configure.ac:143: the top level configure.ac:144: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:144: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:144: the top level configure.ac:148: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:148: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... configure.ac:148: the top level configure.ac:183: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:183: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... configure.ac:183: the top level configure.ac:276: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:276: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... acinclude.m4:239: AM_PATH_GSL is expanded from... configure.ac:276: the top level configure.ac:276: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:276: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:239: AM_PATH_GSL is expanded from... configure.ac:276: the top level configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:50: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.ac:108: installing './compile' configure.ac:50: installing './missing' doc/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') doc/Makefile.am:12: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory, doc/Makefile.am:12: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least one source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, this automake: behavior may change in a future Automake major version, with object automake: files being placed in the same subdirectory as the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. doc/Makefile.am: installing './depcomp' doc/examples/Makefile.am:118: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') doc/examples/Makefile.am:123: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory, doc/examples/Makefile.am:123: but option 'subdir-objects' is disabled parallel-tests: installing './test-driver' modules/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') tools/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-mpi ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-mpi checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for mpicc... yes checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mpicc... none checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... dlltool checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gawk... (cached) mawk checking for library containing strerror... none required checking for egrep... (cached) /usr/bin/grep -E checking whether pointers can be stored in doubles... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for gts >= 0.7.4... yes checking whether modules are supported... yes checking for pkg-config... yes checking for m4... yes checking check whether m4 accepts the -P option... yes checking for pj_fwd in -lproj... no configure: WARNING: libproj not found. Map module will not be available. checking for proj_api.h... no checking for gsl-config... /usr/bin/gsl-config checking for GSL - version >= 0.2.5... yes checking for nc_open in -lnetcdf... yes checking for netcdf.h... yes checking for g77... no checking for xlf... no checking for f77... f77 checking whether the compiler supports GNU Fortran 77... yes checking whether f77 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/arm-linux-gnueabihf/13 -L/usr/lib/gcc/arm-linux-gnueabihf/13/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/13/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for ode-config... no configure: WARNING: ODE not found. ode module will not be available. checking for HYPRE_IJMatrixCreate in -lHYPRE... no configure: WARNING: HYPRE not found. hypre Module won't be available. checking for lis_initialize in -llis... no configure: WARNING: lis not found. lis Module won't be available. checking for fftw3 >= 3 ... no checking for fenv.h... yes checking for unistd.h... (cached) yes checking for getopt.h... yes checking for getopt_long... yes checking for g_mkdtemp... yes checking for open_memstream... yes checking for funopen... no checking for open_memstream... (cached) yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/gerris2D.pc config.status: creating src/gerris3D.pc config.status: creating tools/Makefile config.status: creating modules/Makefile config.status: creating modules/RStarTree/Makefile config.status: creating modules/kdt/Makefile config.status: creating modules/fes2004/Makefile config.status: creating modules/wavewatch/Makefile config.status: creating modules/culvert/Makefile config.status: creating test/Makefile config.status: creating doc/Makefile config.status: creating doc/tutorial/Makefile config.status: creating doc/examples/Makefile config.status: creating doc/manpages/Makefile config.status: creating doc/examples/gfs2doc config.status: creating doc/examples/gfs-highlight config.status: creating doc/examples/crossref.sh config.status: creating desktop/Makefile config.status: creating debian/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration summary System = arm-unknown-linux-gnueabihf C Compiler = mpicc C Flags = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 MPI enabled = yes GModule support = yes pkg-config = yes m4 = yes m4 options = -P open_memstream = yes Modules map = no tide = yes stokes = yes wavewatch = no hypre = no lis = no agmg = no ode = no bubbles = yes fft = no make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' make all-am make[4]: Entering directory '/<>/src' mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris2D-gerris.o `test -f 'gerris.c' || echo './'`gerris.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gerris.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ftt.lo `test -f 'ftt.c' || echo './'`ftt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ftt.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ftt.c:2129: ftt_internal.c: In function ‘traverse_all_direct_faces’: ftt_internal.c:53:12: warning: storing the address of local variable ‘d’ in ‘*datum’ [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: ‘d’ declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: ‘datum’ declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function ‘traverse_all_faces’: ftt_internal.c:43:12: warning: storing the address of local variable ‘d’ in ‘*datum’ [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: ‘d’ declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: ‘datum’ declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-fluid.lo `test -f 'fluid.c' || echo './'`fluid.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from fluid.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fluid.c:2605:38: warning: argument 4 of type ‘gdouble[5]’ {aka ‘double[5]’} with mismatched bound [-Warray-parameter=] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from fluid.c:27: fluid.h:240:62: note: previously declared as ‘gdouble[4]’ {aka ‘double[4]’} 240 | gdouble f[4*(FTT_DIMENSION - 1)]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ fluid.c:3067:45: warning: argument 2 of type ‘FttDirection[2]’ with mismatched bound [-Warray-parameter=] 3067 | FttDirection d[FTT_DIMENSION], | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ fluid.h:280:69: note: previously declared as ‘FttDirection *’ 280 | FttDirection * d, | ~~~~~~~~~~~~~~~^ fluid.c:126:20: warning: ‘interpolate_1D2’ defined but not used [-Wunused-function] 126 | static GfsGradient interpolate_1D2 (FttCell * cell, | ^~~~~~~~~~~~~~~ fluid.c: In function ‘face_bilinear’: fluid.c:1151:37: warning: ‘d[2]’ is used uninitialized [-Wuninitialized] 1151 | d1[0] = d[1]; d1[1] = d[0]; d1[2] = d[2]; | ~~~~~~^~~~~~ fluid.c:1145:16: note: ‘d[2]’ was declared here 1145 | FttDirection d[3], d1[3]; | ^ In function ‘gfs_cell_corner_values’, inlined from ‘gfs_cell_corner_values’ at fluid.c:2602:6: fluid.c:2614:28: warning: array subscript 4 is outside array bounds of ‘gdouble[4]’ {aka ‘double[4]’} [-Warray-bounds=] 2614 | f[4*(FTT_DIMENSION - 1)] = GFS_VALUE (cell, v); fluid.c: In function ‘gfs_cell_corner_values’: fluid.c:2605:38: note: at offset 32 into object ‘f’ of size [0, 32] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-variable.lo `test -f 'variable.c' || echo './'`variable.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from variable.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-output.lo `test -f 'output.c' || echo './'`output.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from output.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-solid.lo `test -f 'solid.c' || echo './'`solid.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from solid.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ solid.c: In function ‘paint_mixed_leaf’: solid.c:794:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 794 | w/k, i, solid->s[i]); | ^~~~~~~~~~~~~~~~~~ solid.c: In function ‘check_area_fractions’: solid.c:1010:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1010 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1019:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1019 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1039:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1039 | oi, nsolid->s[oi]); | ^~~~~~~~~~~ solid.c:1053:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1053 | oi, nsolid->s[oi]); | ^~~~~~~~~~~~~~~~ solid.c:1065:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1065 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c:1081:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1081 | i, solid->s[i]); | ^~~~~~~~ solid.c:1095:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1095 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c: In function ‘check_solid_fractions’: solid.c:1127:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1127 | n, GFS_STATE (children.c[n])->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ solid.c:1145:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1145 | a, GFS_STATE (cell)->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-poisson.lo `test -f 'poisson.c' || echo './'`poisson.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from poisson.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-advection.lo `test -f 'advection.c' || echo './'`advection.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from advection.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ advection.c: In function ‘set_merged’: advection.c:663:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 663 | solid->a); | ^ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-boundary.lo `test -f 'boundary.c' || echo './'`boundary.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from boundary.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-mpi_boundary.lo `test -f 'mpi_boundary.c' || echo './'`mpi_boundary.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from mpi_boundary.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mpi_boundary.c: In function ‘gfs_boundary_mpi_init’: mpi_boundary.c:280:5: warning: ‘MPI_Attr_get’ is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations] 280 | MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag); | ^~~~~~~~~~~~ In file included from utils.h:34, from boundary.h:24, from domain.h:23, from mpi_boundary.c:24: /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2744:20: note: declared here 2744 | OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) | ^~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-timestep.lo `test -f 'timestep.c' || echo './'`timestep.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from timestep.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-domain.lo `test -f 'domain.c' || echo './'`domain.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from domain.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from domain.c:1702: ftt_internal.c: In function ‘traverse_all_direct_faces’: ftt_internal.c:53:12: warning: storing the address of local variable ‘d’ in ‘*datum’ [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: ‘d’ declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: ‘datum’ declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function ‘traverse_all_faces’: ftt_internal.c:43:12: warning: storing the address of local variable ‘d’ in ‘*datum’ [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: ‘d’ declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: ‘datum’ declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-init.lo `test -f 'init.c' || echo './'`init.c init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from init.c:34: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-refine.lo `test -f 'refine.c' || echo './'`refine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from refine.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-event.lo `test -f 'event.c' || echo './'`event.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from event.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-simulation.lo `test -f 'simulation.c' || echo './'`simulation.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from simulation.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ simulation.c: In function ‘load_module’: simulation.c:214:7: warning: ‘g_module_build_path’ is deprecated [-Wdeprecated-declarations] 214 | gchar * path = g_module_build_path (GFS_MODULES_DIR, name); | ^~~~~ In file included from simulation.c:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ simulation.c: In function ‘error_handler’: simulation.c:1780:39: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 1780 | snprintf (fname, 20, "error-%d.gfs", domain->pid); | ^ In file included from /usr/include/stdio.h:980, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from simulation.c:27: In function ‘snprintf’, inlined from ‘error_handler’ at simulation.c:1780:5: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:54:10: note: ‘__builtin___snprintf_chk’ output between 12 and 21 bytes into a destination of size 20 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-graphic.lo `test -f 'graphic.c' || echo './'`graphic.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from graphic.c:30: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ graphic.c: In function ‘grow_curve’: graphic.c:1986:17: warning: variable ‘p1’ set but not used [-Wunused-but-set-variable] 1986 | FttVector p1; | ^~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-adaptive.lo `test -f 'adaptive.c' || echo './'`adaptive.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from adaptive.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-source.lo `test -f 'source.c' || echo './'`source.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from source.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-tension.lo `test -f 'tension.c' || echo './'`tension.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from tension.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-vof.lo `test -f 'vof.c' || echo './'`vof.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from vof.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vof.c: In function ‘gfs_height_curvature’: vof.c:2619:11: warning: unused variable ‘area’ [-Wunused-variable] 2619 | gdouble area = gfs_vof_center (cell, t, &fc); | ^~~~ vof.c: In function ‘gfs_height_curvature_new’: vof.c:2871:11: warning: unused variable ‘area’ [-Wunused-variable] 2871 | gdouble area = gfs_vof_center (cell, GFS_VARIABLE_TRACER_VOF (t), &fc); | ^~~~ vof.c: At top level: vof.c:1771:16: warning: ‘face_value’ defined but not used [-Wunused-function] 1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v) | ^~~~~~~~~~ vof.c:850:13: warning: ‘youngs_normal’ defined but not used [-Wunused-function] 850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n) | ^~~~~~~~~~~~~ vof.c: In function ‘add_vof_center’: vof.c:2443:5: warning: ‘parabola_fit_add’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2443 | parabola_fit_add (fit, &c.x, w*area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2443:5: note: referencing argument 2 of type ‘gdouble[3]’ {aka ‘double[3]’} vof.c:2277:13: note: in a call to function ‘parabola_fit_add’ 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function ‘myc_normal’: vof.c:897:3: warning: ‘mycs’ accessing 16 bytes in a region of size 8 [-Wstringop-overflow=] 897 | mycs (f, &n->x); | ^~~~~~~~~~~~~~~ vof.c:897:3: note: referencing argument 2 of type ‘double[2]’ In file included from vof.c:887: myc2d.h:6:13: note: in a call to function ‘mycs’ 6 | static void mycs(double c[3][3],double mxy[2]) | ^~~~ vof.c: In function ‘gfs_fit_curvature’: vof.c:2508:3: warning: ‘parabola_fit_add’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2508 | parabola_fit_add (&fit, &fc.x, area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2508:3: note: referencing argument 2 of type ‘gdouble[3]’ {aka ‘double[3]’} vof.c:2277:13: note: in a call to function ‘parabola_fit_add’ 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function ‘gfs_height_curvature’: vof.c:2625:3: warning: ‘parabola_fit_add’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2625 | parabola_fit_add (&fit, &fc.x, PARABOLA_FIT_CENTER_WEIGHT); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2625:3: note: referencing argument 2 of type ‘gdouble[3]’ {aka ‘double[3]’} vof.c:2277:13: note: in a call to function ‘parabola_fit_add’ 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function ‘gfs_height_curvature_new’: vof.c:2877:3: warning: ‘parabola_fit_add’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2877 | parabola_fit_add (&fit, &fc.x, PARABOLA_FIT_CENTER_WEIGHT); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2877:3: note: referencing argument 2 of type ‘gdouble[3]’ {aka ‘double[3]’} vof.c:2277:13: note: in a call to function ‘parabola_fit_add’ 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-utils.lo `test -f 'utils.c' || echo './'`utils.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from utils.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ utils.c: In function ‘get_tmp_file’: utils.c:57:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 57 | GTimeVal tv; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gts.h:24, from solid.h:23, from utils.c:36: /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:72:3: warning: ‘g_get_current_time’ is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 72 | g_get_current_time (&tv); | ^~~~~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib/giochannel.h:35, from /usr/include/glib-2.0/glib.h:56: /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function ‘current_time’: utils.c:653:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 653 | GTimeVal r; | ^~~~~~~~ /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:654:3: warning: ‘g_get_current_time’ is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 654 | g_get_current_time (&r); | ^~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function ‘compile’: utils.c:699:5: warning: ‘g_module_build_path’ is deprecated [-Wdeprecated-declarations] 699 | gchar * path = g_module_build_path (GFS_MODULES_DIR, mname); | ^~~~~ In file included from utils.h:28, from boundary.h:24, from domain.h:23, from solid.h:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ocean.lo `test -f 'ocean.c' || echo './'`ocean.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ocean.c:24: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ocean.c: In function ‘correct_normal_velocity’: ocean.c:45:15: warning: variable ‘type’ set but not used [-Wunused-but-set-variable] 45 | FttFaceType type; | ^~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-wave.lo `test -f 'wave.c' || echo './'`wave.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from wave.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-levelset.lo `test -f 'levelset.c' || echo './'`levelset.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from levelset.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-cartesian.lo `test -f 'cartesian.c' || echo './'`cartesian.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from cartesian.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-surface.lo `test -f 'surface.c' || echo './'`surface.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from surface.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-unstructured.lo `test -f 'unstructured.c' || echo './'`unstructured.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from unstructured.h:24, from unstructured.c:24: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-map.lo `test -f 'map.c' || echo './'`map.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from advection.h:27, from timestep.h:27, from variable.h:29, from map.h:27, from map.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ map.c: In function ‘gfs_map_read’: map.c:34:12: warning: variable ‘class_changed’ set but not used [-Wunused-but-set-variable] 34 | gboolean class_changed = FALSE; | ^~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-river.lo `test -f 'river.c' || echo './'`river.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from river.c:55: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-moving.lo `test -f 'moving.c' || echo './'`moving.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from moving.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from moving.c:49: moving2.c: In function ‘second_order_face_fractions’: moving2.c:257:33: warning: variable ‘s1’ set but not used [-Wunused-but-set-variable] 257 | gdouble dt1, dt2, dto1, dto2, s1, s2; | ^~ moving2.c: In function ‘old_solid_fractions_from_children’: moving2.c:731:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 731 | for (i = 0; i < FTT_CELLS; i++) | ^~~ moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 735 | gfs_cell_init_solid_fractions_from_children (cell); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-balance.lo `test -f 'balance.c' || echo './'`balance.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from event.h:27, from balance.h:27, from balance.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-metric.lo `test -f 'metric.c' || echo './'`metric.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from metric.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ metric.c:241:15: warning: ‘kpu_2d_l4’ defined but not used [-Wunused-variable] 241 | static double kpu_2d_l4[17][3] = { | ^~~~~~~~~ metric.c:221:15: warning: ‘kpu_2d_l2’ defined but not used [-Wunused-variable] 221 | static double kpu_2d_l2[5][3] = { | ^~~~~~~~~ metric.c: In function ‘matrix_a’: metric.c:1408:12: warning: ‘excess_of_quad’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1408 | a += excess_of_quad (&r[i0+i][j0+j].x1, &r[i0+i+1][j0+j].x1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1409 | &r[i0+i+1][j0+j+1].x1, &r[i0+i][j0+j+1].x1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1408:12: note: referencing argument 1 of type ‘const double[3]’ metric.c:1408:12: warning: ‘excess_of_quad’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 2 of type ‘const double[3]’ metric.c:1408:12: warning: ‘excess_of_quad’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 3 of type ‘const double[3]’ metric.c:1408:12: warning: ‘excess_of_quad’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 4 of type ‘const double[3]’ metric.c:1034:15: note: in a call to function ‘excess_of_quad’ 1034 | static double excess_of_quad (const double v1[3], const double v2[3], | ^~~~~~~~~~~~~~ metric.c: In function ‘matrix_hy’: metric.c:1429:11: warning: ‘angle_between_vectors’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1429 | hy += angle_between_vectors (&r[i0][j0+j].x1, &r[i0][j0+j+1].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1429:11: note: referencing argument 1 of type ‘const double[3]’ metric.c:1429:11: warning: ‘angle_between_vectors’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1429:11: note: referencing argument 2 of type ‘const double[3]’ metric.c:1018:15: note: in a call to function ‘angle_between_vectors’ 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ metric.c: In function ‘matrix_hx’: metric.c:1419:11: warning: ‘angle_between_vectors’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1419 | hx += angle_between_vectors (&r[i0+i][j0].x1, &r[i0+i+1][j0].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1419:11: note: referencing argument 1 of type ‘const double[3]’ metric.c:1419:11: warning: ‘angle_between_vectors’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1419:11: note: referencing argument 2 of type ‘const double[3]’ metric.c:1018:15: note: in a call to function ‘angle_between_vectors’ 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ In function ‘excess_of_quad’, inlined from ‘matrix_a’ at metric.c:1408:12: metric.c:1039:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1039 | plane_normal (v1, v2, plane1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1039:3: note: referencing argument 1 of type ‘const double[3]’ metric.c:1039:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1039:3: note: referencing argument 2 of type ‘const double[3]’ metric.c:1039:3: note: referencing argument 3 of type ‘double[3]’ metric.c: In function ‘matrix_a’: metric.c:1023:13: note: in a call to function ‘plane_normal’ 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function ‘excess_of_quad’, inlined from ‘matrix_a’ at metric.c:1408:12: metric.c:1040:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1040 | plane_normal (v2, v3, plane2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1040:3: note: referencing argument 1 of type ‘const double[3]’ metric.c:1040:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1040:3: note: referencing argument 2 of type ‘const double[3]’ metric.c:1040:3: note: referencing argument 3 of type ‘double[3]’ metric.c: In function ‘matrix_a’: metric.c:1023:13: note: in a call to function ‘plane_normal’ 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function ‘excess_of_quad’, inlined from ‘matrix_a’ at metric.c:1408:12: metric.c:1041:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1041 | plane_normal (v3, v4, plane3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1041:3: note: referencing argument 1 of type ‘const double[3]’ metric.c:1041:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1041:3: note: referencing argument 2 of type ‘const double[3]’ metric.c:1041:3: note: referencing argument 3 of type ‘double[3]’ metric.c: In function ‘matrix_a’: metric.c:1023:13: note: in a call to function ‘plane_normal’ 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function ‘excess_of_quad’, inlined from ‘matrix_a’ at metric.c:1408:12: metric.c:1042:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1042 | plane_normal (v4, v1, plane4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1042:3: note: referencing argument 1 of type ‘const double[3]’ metric.c:1042:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1042:3: note: referencing argument 2 of type ‘const double[3]’ metric.c:1042:3: note: referencing argument 3 of type ‘double[3]’ metric.c: In function ‘matrix_a’: metric.c:1023:13: note: in a call to function ‘plane_normal’ 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-particle.lo `test -f 'particle.c' || echo './'`particle.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particle.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libgfs2D.la -rpath /usr/lib/arm-linux-gnueabihf libgfs2D_la-ftt.lo libgfs2D_la-fluid.lo libgfs2D_la-variable.lo libgfs2D_la-output.lo libgfs2D_la-solid.lo libgfs2D_la-poisson.lo libgfs2D_la-advection.lo libgfs2D_la-boundary.lo libgfs2D_la-mpi_boundary.lo libgfs2D_la-timestep.lo libgfs2D_la-domain.lo libgfs2D_la-init.lo libgfs2D_la-refine.lo libgfs2D_la-event.lo libgfs2D_la-simulation.lo libgfs2D_la-graphic.lo libgfs2D_la-adaptive.lo libgfs2D_la-source.lo libgfs2D_la-tension.lo libgfs2D_la-vof.lo libgfs2D_la-utils.lo libgfs2D_la-ocean.lo libgfs2D_la-wave.lo libgfs2D_la-levelset.lo libgfs2D_la-cartesian.lo libgfs2D_la-surface.lo libgfs2D_la-unstructured.lo libgfs2D_la-map.lo libgfs2D_la-river.lo libgfs2D_la-moving.lo libgfs2D_la-balance.lo libgfs2D_la-metric.lo libgfs2D_la-particle.lo -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gerris2D gerris2D-gerris.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris.o gerris.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gerris.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ftt.lo ftt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ftt.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ftt.c:2129: ftt_internal.c: In function ‘traverse_all_direct_faces’: ftt_internal.c:53:12: warning: storing the address of local variable ‘d’ in ‘*datum’ [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: ‘d’ declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: ‘datum’ declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function ‘traverse_all_faces’: ftt_internal.c:43:12: warning: storing the address of local variable ‘d’ in ‘*datum’ [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: ‘d’ declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: ‘datum’ declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o fluid.lo fluid.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from fluid.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fluid.c: In function ‘gfs_cell_coarse_fine’: fluid.c:1918:42: warning: unused variable ‘gz4’ [-Wunused-variable] 1918 | double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa; | ^~~ fluid.c:1918:14: warning: unused variable ‘gz3’ [-Wunused-variable] 1918 | double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa; | ^~~ fluid.c:1916:42: warning: unused variable ‘gy4’ [-Wunused-variable] 1916 | double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa; | ^~~ fluid.c:1916:14: warning: unused variable ‘gy3’ [-Wunused-variable] 1916 | double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa; | ^~~ fluid.c:1914:42: warning: unused variable ‘gx4’ [-Wunused-variable] 1914 | double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa; | ^~~ fluid.c:1914:14: warning: unused variable ‘gx3’ [-Wunused-variable] 1914 | double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa; | ^~~ fluid.c: At top level: fluid.c:2605:38: warning: argument 4 of type ‘gdouble[9]’ {aka ‘double[9]’} with mismatched bound [-Warray-parameter=] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from fluid.c:27: fluid.h:240:62: note: previously declared as ‘gdouble[8]’ {aka ‘double[8]’} 240 | gdouble f[4*(FTT_DIMENSION - 1)]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ fluid.c:3067:45: warning: argument 2 of type ‘FttDirection[3]’ with mismatched bound [-Warray-parameter=] 3067 | FttDirection d[FTT_DIMENSION], | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ fluid.h:280:69: note: previously declared as ‘FttDirection *’ 280 | FttDirection * d, | ~~~~~~~~~~~~~~~^ In function ‘gfs_cell_corner_values’, inlined from ‘gfs_cell_corner_values’ at fluid.c:2602:6: fluid.c:2614:28: warning: array subscript 8 is outside array bounds of ‘gdouble[8]’ {aka ‘double[8]’} [-Warray-bounds=] 2614 | f[4*(FTT_DIMENSION - 1)] = GFS_VALUE (cell, v); fluid.c: In function ‘gfs_cell_corner_values’: fluid.c:2605:38: note: at offset 64 into object ‘f’ of size [0, 64] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o variable.lo variable.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from variable.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o output.lo output.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from output.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o solid.lo solid.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from solid.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ solid.c: In function ‘set_solid_fractions_from_surface’: solid.c:561:21: warning: comparison between ‘FttComponent’ and ‘enum ’ [-Wenum-compare] 561 | for (c = 1; c < FTT_NEIGHBORS; c++) | ^ solid.c: In function ‘paint_mixed_leaf’: solid.c:794:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 794 | w/k, i, solid->s[i]); | ^~~~~~~~~~~~~~~~~~ solid.c: In function ‘check_area_fractions’: solid.c:1010:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1010 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1019:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1019 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1039:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1039 | oi, nsolid->s[oi]); | ^~~~~~~~~~~ solid.c:1053:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1053 | oi, nsolid->s[oi]); | ^~~~~~~~~~~~~~~~ solid.c:1065:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1065 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c:1081:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1081 | i, solid->s[i]); | ^~~~~~~~ solid.c:1095:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1095 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c: In function ‘check_solid_fractions’: solid.c:1127:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1127 | n, GFS_STATE (children.c[n])->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ solid.c:1145:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1145 | a, GFS_STATE (cell)->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~ In file included from solid.c:338: isocube.h: At top level: isocube.h:95:21: warning: ‘corner’ defined but not used [-Wunused-variable] 95 | static FttDirection corner[8][3] = { | ^~~~~~ isocube.h:66:18: warning: ‘cvertex’ defined but not used [-Wunused-variable] 66 | static FttVector cvertex[8] = { | ^~~~~~~ isocube.h:52:14: warning: ‘connectv’ defined but not used [-Wunused-variable] 52 | static guint connectv[12][2][4] = { | ^~~~~~~~ isocube.h:47:18: warning: ‘edge’ defined but not used [-Wunused-variable] 47 | static FttVector edge[12][2] = { | ^~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o poisson.lo poisson.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from poisson.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o advection.lo advection.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from advection.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ advection.c: In function ‘set_merged’: advection.c:663:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 663 | solid->a); | ^ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o boundary.lo boundary.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from boundary.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o mpi_boundary.lo mpi_boundary.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from mpi_boundary.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mpi_boundary.c: In function ‘gfs_boundary_mpi_init’: mpi_boundary.c:280:5: warning: ‘MPI_Attr_get’ is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations] 280 | MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag); | ^~~~~~~~~~~~ In file included from utils.h:34, from boundary.h:24, from domain.h:23, from mpi_boundary.c:24: /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2744:20: note: declared here 2744 | OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) | ^~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o timestep.lo timestep.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from timestep.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o domain.lo domain.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from domain.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from domain.c:1702: ftt_internal.c: In function ‘traverse_all_direct_faces’: ftt_internal.c:53:12: warning: storing the address of local variable ‘d’ in ‘*datum’ [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: ‘d’ declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: ‘datum’ declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function ‘traverse_all_faces’: ftt_internal.c:43:12: warning: storing the address of local variable ‘d’ in ‘*datum’ [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: ‘d’ declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: ‘datum’ declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o init.lo init.c init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from init.c:34: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o refine.lo refine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from refine.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o event.lo event.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from event.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o simulation.lo simulation.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from simulation.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ simulation.c: In function ‘load_module’: simulation.c:214:7: warning: ‘g_module_build_path’ is deprecated [-Wdeprecated-declarations] 214 | gchar * path = g_module_build_path (GFS_MODULES_DIR, name); | ^~~~~ In file included from simulation.c:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ simulation.c: In function ‘error_handler’: simulation.c:1780:39: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 1780 | snprintf (fname, 20, "error-%d.gfs", domain->pid); | ^ In file included from /usr/include/stdio.h:980, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from simulation.c:27: In function ‘snprintf’, inlined from ‘error_handler’ at simulation.c:1780:5: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:54:10: note: ‘__builtin___snprintf_chk’ output between 12 and 21 bytes into a destination of size 20 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o graphic.lo graphic.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from graphic.c:30: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from graphic.c:42: isocube.h:66:18: warning: ‘cvertex’ defined but not used [-Wunused-variable] 66 | static FttVector cvertex[8] = { | ^~~~~~~ isocube.h:52:14: warning: ‘connectv’ defined but not used [-Wunused-variable] 52 | static guint connectv[12][2][4] = { | ^~~~~~~~ isocube.h:39:14: warning: ‘face_v’ defined but not used [-Wunused-variable] 39 | static guint face_v[6][4] = { | ^~~~~~ isocube.h:31:14: warning: ‘face’ defined but not used [-Wunused-variable] 31 | static guint face[6][4][2] = { | ^~~~ isocube.h:27:18: warning: ‘vertex’ defined but not used [-Wunused-variable] 27 | static FttVector vertex[8] = { | ^~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o adaptive.lo adaptive.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from adaptive.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o source.lo source.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from source.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o tension.lo tension.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from tension.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o vof.lo vof.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from vof.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vof.c:2682:13: warning: ‘curvature_from_h’ defined but not used [-Wunused-function] 2682 | static void curvature_from_h (FttCell * cell, GfsDomain * domain, | ^~~~~~~~~~~~~~~~ vof.c:2646:16: warning: ‘neighboring_column’ defined but not used [-Wunused-function] 2646 | static gdouble neighboring_column (FttCell * cell, | ^~~~~~~~~~~~~~~~~~ vof.c:1771:16: warning: ‘face_value’ defined but not used [-Wunused-function] 1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v) | ^~~~~~~~~~ vof.c:850:13: warning: ‘youngs_normal’ defined but not used [-Wunused-function] 850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n) | ^~~~~~~~~~~~~ vof.c: In function ‘add_vof_center’: vof.c:2443:5: warning: ‘parabola_fit_add’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2443 | parabola_fit_add (fit, &c.x, w*area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2443:5: note: referencing argument 2 of type ‘gdouble[3]’ {aka ‘double[3]’} vof.c:2277:13: note: in a call to function ‘parabola_fit_add’ 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function ‘myc_normal’: vof.c:897:3: warning: ‘mycs’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 897 | mycs (f, &n->x); | ^~~~~~~~~~~~~~~ vof.c:897:3: note: referencing argument 2 of type ‘double[3]’ In file included from vof.c:889: myc.h:17:13: note: in a call to function ‘mycs’ 17 | static void mycs(double c[3][3][3],double mxyz[3]) | ^~~~ vof.c: In function ‘gfs_fit_curvature’: vof.c:2508:3: warning: ‘parabola_fit_add’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2508 | parabola_fit_add (&fit, &fc.x, area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2508:3: note: referencing argument 2 of type ‘gdouble[3]’ {aka ‘double[3]’} vof.c:2277:13: note: in a call to function ‘parabola_fit_add’ 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function ‘gfs_height_curvature’: vof.c:2627:3: warning: ‘parabola_fit_add’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2627 | parabola_fit_add (&fit, &fc.x, area*100.); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2627:3: note: referencing argument 2 of type ‘gdouble[3]’ {aka ‘double[3]’} vof.c:2277:13: note: in a call to function ‘parabola_fit_add’ 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function ‘gfs_height_curvature_new’: vof.c:2879:3: warning: ‘parabola_fit_add’ accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2879 | parabola_fit_add (&fit, &fc.x, area*100.); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2879:3: note: referencing argument 2 of type ‘gdouble[3]’ {aka ‘double[3]’} vof.c:2277:13: note: in a call to function ‘parabola_fit_add’ 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o utils.lo utils.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from utils.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ utils.c: In function ‘get_tmp_file’: utils.c:57:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 57 | GTimeVal tv; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gts.h:24, from solid.h:23, from utils.c:36: /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:72:3: warning: ‘g_get_current_time’ is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 72 | g_get_current_time (&tv); | ^~~~~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib/giochannel.h:35, from /usr/include/glib-2.0/glib.h:56: /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function ‘current_time’: utils.c:653:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 653 | GTimeVal r; | ^~~~~~~~ /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:654:3: warning: ‘g_get_current_time’ is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 654 | g_get_current_time (&r); | ^~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function ‘compile’: utils.c:699:5: warning: ‘g_module_build_path’ is deprecated [-Wdeprecated-declarations] 699 | gchar * path = g_module_build_path (GFS_MODULES_DIR, mname); | ^~~~~ In file included from utils.h:28, from boundary.h:24, from domain.h:23, from solid.h:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ocean.lo ocean.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ocean.c:24: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ocean.c: In function ‘correct_normal_velocity’: ocean.c:45:15: warning: variable ‘type’ set but not used [-Wunused-but-set-variable] 45 | FttFaceType type; | ^~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o wave.lo wave.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from wave.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o levelset.lo levelset.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from levelset.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o cartesian.lo cartesian.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from cartesian.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o surface.lo surface.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from surface.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o unstructured.lo unstructured.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from unstructured.h:24, from unstructured.c:24: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ unstructured.c: In function ‘allocate_wallfaces’: unstructured.c:437:5: warning: ‘gfs_cut_cube_vertices’ accessing 288 bytes in a region of size 168 [-Wstringop-overflow=] 437 | gfs_cut_cube_vertices (cell, -1, &s->ca, &normal, nodecutface, d, NULL, NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ unstructured.c:437:5: note: referencing argument 5 of type ‘FttVector[12]’ {aka ‘struct _FttVector[12]’} unstructured.c:437:5: note: referencing argument 6 of type ‘FttDirection[12]’ unstructured.c:437:5: note: referencing argument 8 of type ‘gdouble[12]’ {aka ‘double[12]’} In file included from unstructured.c:28: graphic.h:137:20: note: in a call to function ‘gfs_cut_cube_vertices’ 137 | guint gfs_cut_cube_vertices (FttCell * cell, | ^~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o map.lo map.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from advection.h:27, from timestep.h:27, from variable.h:29, from map.h:27, from map.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ map.c: In function ‘gfs_map_read’: map.c:34:12: warning: variable ‘class_changed’ set but not used [-Wunused-but-set-variable] 34 | gboolean class_changed = FALSE; | ^~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o river.lo river.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from river.c:55: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o moving.lo moving.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from moving.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from moving.c:49: moving2.c: In function ‘second_order_face_fractions’: moving2.c:257:33: warning: variable ‘s1’ set but not used [-Wunused-but-set-variable] 257 | gdouble dt1, dt2, dto1, dto2, s1, s2; | ^~ moving2.c: In function ‘old_solid_fractions_from_children’: moving2.c:731:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 731 | for (i = 0; i < FTT_CELLS; i++) | ^~~ moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 735 | gfs_cell_init_solid_fractions_from_children (cell); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o balance.lo balance.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from event.h:27, from balance.h:27, from balance.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o metric.lo metric.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from metric.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ metric.c:241:15: warning: ‘kpu_2d_l4’ defined but not used [-Wunused-variable] 241 | static double kpu_2d_l4[17][3] = { | ^~~~~~~~~ metric.c:221:15: warning: ‘kpu_2d_l2’ defined but not used [-Wunused-variable] 221 | static double kpu_2d_l2[5][3] = { | ^~~~~~~~~ metric.c: In function ‘matrix_a’: metric.c:1408:12: warning: ‘excess_of_quad’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1408 | a += excess_of_quad (&r[i0+i][j0+j].x1, &r[i0+i+1][j0+j].x1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1409 | &r[i0+i+1][j0+j+1].x1, &r[i0+i][j0+j+1].x1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1408:12: note: referencing argument 1 of type ‘const double[3]’ metric.c:1408:12: warning: ‘excess_of_quad’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 2 of type ‘const double[3]’ metric.c:1408:12: warning: ‘excess_of_quad’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 3 of type ‘const double[3]’ metric.c:1408:12: warning: ‘excess_of_quad’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 4 of type ‘const double[3]’ metric.c:1034:15: note: in a call to function ‘excess_of_quad’ 1034 | static double excess_of_quad (const double v1[3], const double v2[3], | ^~~~~~~~~~~~~~ metric.c: In function ‘matrix_hy’: metric.c:1429:11: warning: ‘angle_between_vectors’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1429 | hy += angle_between_vectors (&r[i0][j0+j].x1, &r[i0][j0+j+1].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1429:11: note: referencing argument 1 of type ‘const double[3]’ metric.c:1429:11: warning: ‘angle_between_vectors’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1429:11: note: referencing argument 2 of type ‘const double[3]’ metric.c:1018:15: note: in a call to function ‘angle_between_vectors’ 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ metric.c: In function ‘matrix_hx’: metric.c:1419:11: warning: ‘angle_between_vectors’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1419 | hx += angle_between_vectors (&r[i0+i][j0].x1, &r[i0+i+1][j0].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1419:11: note: referencing argument 1 of type ‘const double[3]’ metric.c:1419:11: warning: ‘angle_between_vectors’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1419:11: note: referencing argument 2 of type ‘const double[3]’ metric.c:1018:15: note: in a call to function ‘angle_between_vectors’ 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ In function ‘excess_of_quad’, inlined from ‘matrix_a’ at metric.c:1408:12: metric.c:1039:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1039 | plane_normal (v1, v2, plane1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1039:3: note: referencing argument 1 of type ‘const double[3]’ metric.c:1039:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1039:3: note: referencing argument 2 of type ‘const double[3]’ metric.c:1039:3: note: referencing argument 3 of type ‘double[3]’ metric.c: In function ‘matrix_a’: metric.c:1023:13: note: in a call to function ‘plane_normal’ 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function ‘excess_of_quad’, inlined from ‘matrix_a’ at metric.c:1408:12: metric.c:1040:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1040 | plane_normal (v2, v3, plane2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1040:3: note: referencing argument 1 of type ‘const double[3]’ metric.c:1040:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1040:3: note: referencing argument 2 of type ‘const double[3]’ metric.c:1040:3: note: referencing argument 3 of type ‘double[3]’ metric.c: In function ‘matrix_a’: metric.c:1023:13: note: in a call to function ‘plane_normal’ 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function ‘excess_of_quad’, inlined from ‘matrix_a’ at metric.c:1408:12: metric.c:1041:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1041 | plane_normal (v3, v4, plane3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1041:3: note: referencing argument 1 of type ‘const double[3]’ metric.c:1041:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1041:3: note: referencing argument 2 of type ‘const double[3]’ metric.c:1041:3: note: referencing argument 3 of type ‘double[3]’ metric.c: In function ‘matrix_a’: metric.c:1023:13: note: in a call to function ‘plane_normal’ 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function ‘excess_of_quad’, inlined from ‘matrix_a’ at metric.c:1408:12: metric.c:1042:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] 1042 | plane_normal (v4, v1, plane4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1042:3: note: referencing argument 1 of type ‘const double[3]’ metric.c:1042:3: warning: ‘plane_normal’ reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1042:3: note: referencing argument 2 of type ‘const double[3]’ metric.c:1042:3: note: referencing argument 3 of type ‘double[3]’ metric.c: In function ‘matrix_a’: metric.c:1023:13: note: in a call to function ‘plane_normal’ 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o particle.lo particle.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particle.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libgfs3D.la -rpath /usr/lib/arm-linux-gnueabihf ftt.lo fluid.lo variable.lo output.lo solid.lo poisson.lo advection.lo boundary.lo mpi_boundary.lo timestep.lo domain.lo init.lo refine.lo event.lo simulation.lo graphic.lo adaptive.lo source.lo tension.lo vof.lo utils.lo ocean.lo wave.lo levelset.lo cartesian.lo surface.lo unstructured.lo map.lo river.lo moving.lo balance.lo metric.lo particle.lo -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gerris3D gerris.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making all in modules make[3]: Entering directory '/<>/modules' Making all in RStarTree make[4]: Entering directory '/<>/modules/RStarTree' /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RStarTree.lo `test -f 'RStarTree.c' || echo './'`RStarTree.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from RStarTree.c:3: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RStarTree.c: In function ‘BasicCheck’: RStarTree.c:824:26: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘unsigned int’ [-Wformat=] 824 | fprintf(stderr,"%s %ld\n","sizeof(byte):",sizeof(byte)); | ~~^ ~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:831:26: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘unsigned int’ [-Wformat=] 831 | fprintf(stderr,"%s %ld\n","sizeof(int):",sizeof(int)); | ~~^ ~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:838:26: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘unsigned int’ [-Wformat=] 838 | fprintf(stderr,"%s %ld\n","sizeof(typinfo):",sizeof(typinfo)); | ~~^ ~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:839:26: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘unsigned int’ [-Wformat=] 839 | fprintf(stderr,"%s %ld\n"," sizeof(int):",sizeof(int)); | ~~^ ~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:846:26: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘unsigned int’ [-Wformat=] 846 | fprintf(stderr,"%s %ld\n"," sizeof(typpagedir):",sizeof(typpagedir)); | ~~^ ~~~~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:847:26: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘unsigned int’ [-Wformat=] 847 | fprintf(stderr,"%s %ld\n","sizeof(typfixblock):",sizeof(typfixblock)); | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:854:26: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘unsigned int’ [-Wformat=] 854 | fprintf(stderr,"%s %ld\n","sizeof(typparameters):",sizeof(typparameters)); | ~~^ ~~~~~~~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d RStarTree.c:855:26: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘unsigned int’ [-Wformat=] 855 | fprintf(stderr,"%s %ld\n"," sizeof(typfixblock):",sizeof(typfixblock)); | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int unsigned int | %d /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInstDel.lo `test -f 'RSTInstDel.c' || echo './'`RSTInstDel.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTInstDel.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTInstDel.c: In function ‘SplitAndDistributData’: RSTInstDel.c:848:22: warning: ‘validedge’ may be used uninitialized [-Wmaybe-uninitialized] 848 | validedge= validedge+edge; | ~~~~~~~~~^~~~~~~~~~~~~~~~ RSTInstDel.c:751:37: note: ‘validedge’ was declared here 751 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~ RSTInstDel.c:850:16: warning: ‘validvalue’ may be used uninitialized [-Wmaybe-uninitialized] 850 | if (value < validvalue) { | ^ RSTInstDel.c:753:17: note: ‘validvalue’ was declared here 753 | value, validvalue, backvalvalue; | ^~~~~~~~~~ RSTInstDel.c:938:24: warning: ‘backvaledge’ may be used uninitialized [-Wmaybe-uninitialized] 938 | backvaledge= backvaledge+edge; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RSTInstDel.c:751:48: note: ‘backvaledge’ was declared here 751 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~~~ RSTInstDel.c:940:16: warning: ‘backvalvalue’ may be used uninitialized [-Wmaybe-uninitialized] 940 | if (value < backvalvalue) { | ^ RSTInstDel.c:753:29: note: ‘backvalvalue’ was declared here 753 | value, validvalue, backvalvalue; | ^~~~~~~~~~~~ RSTInstDel.c:971:29: warning: ‘axsortside’ may be used uninitialized [-Wmaybe-uninitialized] 971 | if (axis != (*par).maxdim || axsortside != currsortside) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RSTInstDel.c:744:32: note: ‘axsortside’ was declared here 744 | Side sortside, currsortside, axsortside; | ^~~~~~~~~~ RSTInstDel.c:971:6: warning: ‘axis’ may be used uninitialized [-Wmaybe-uninitialized] 971 | if (axis != (*par).maxdim || axsortside != currsortside) { | ^ RSTInstDel.c:745:7: note: ‘axis’ was declared here 745 | int axis; | ^~~~ RSTInstDel.c:978:16: warning: ‘axisindex’ may be used uninitialized [-Wmaybe-uninitialized] 978 | for (j= 0; j < (*n).nofentries; j++) { | ~~^~~~~~~~~~~~~~~~~ RSTInstDel.c:748:7: note: ‘axisindex’ was declared here 748 | axisindex; | ^~~~~~~~~ RSTInstDel.c: In function ‘SplitAndDistributDir’: RSTInstDel.c:582:22: warning: ‘validedge’ may be used uninitialized [-Wmaybe-uninitialized] 582 | validedge= validedge+edge; | ~~~~~~~~~^~~~~~~~~~~~~~~~ RSTInstDel.c:485:37: note: ‘validedge’ was declared here 485 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~ RSTInstDel.c:584:16: warning: ‘validvalue’ may be used uninitialized [-Wmaybe-uninitialized] 584 | if (value < validvalue) { | ^ RSTInstDel.c:487:17: note: ‘validvalue’ was declared here 487 | value, validvalue, backvalvalue; | ^~~~~~~~~~ RSTInstDel.c:672:24: warning: ‘backvaledge’ may be used uninitialized [-Wmaybe-uninitialized] 672 | backvaledge= backvaledge+edge; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RSTInstDel.c:485:48: note: ‘backvaledge’ was declared here 485 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~~~ RSTInstDel.c:674:16: warning: ‘backvalvalue’ may be used uninitialized [-Wmaybe-uninitialized] 674 | if (value < backvalvalue) { | ^ RSTInstDel.c:487:29: note: ‘backvalvalue’ was declared here 487 | value, validvalue, backvalvalue; | ^~~~~~~~~~~~ RSTInstDel.c:705:29: warning: ‘axsortside’ may be used uninitialized [-Wmaybe-uninitialized] 705 | if (axis != (*par).maxdim || axsortside != currsortside) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RSTInstDel.c:478:32: note: ‘axsortside’ was declared here 478 | Side sortside, currsortside, axsortside; | ^~~~~~~~~~ RSTInstDel.c:705:6: warning: ‘axis’ may be used uninitialized [-Wmaybe-uninitialized] 705 | if (axis != (*par).maxdim || axsortside != currsortside) { | ^ RSTInstDel.c:479:7: note: ‘axis’ was declared here 479 | int axis; | ^~~~ RSTInstDel.c:712:16: warning: ‘axisindex’ may be used uninitialized [-Wmaybe-uninitialized] 712 | for (j= 0; j < (*n).nofentries; j++) { | ~~^~~~~~~~~~~~~~~~~ RSTInstDel.c:482:7: note: ‘axisindex’ was declared here 482 | axisindex; | ^~~~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTJoin.lo `test -f 'RSTJoin.c' || echo './'`RSTJoin.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTJoin.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTUtil.lo `test -f 'RSTUtil.c' || echo './'`RSTUtil.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTUtil.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTUtil.c: In function ‘Covers’: RSTUtil.c:204:7: warning: variable ‘maxdim’ set but not used [-Wunused-but-set-variable] 204 | int maxdim; | ^~~~~~ RSTUtil.c: In function ‘ChooseSubtree’: RSTUtil.c:546:16: warning: variable ‘inv’ set but not used [-Wunused-but-set-variable] 546 | int maxexam, inv; | ^~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInOut.lo `test -f 'RSTInOut.c' || echo './'`RSTInOut.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTInOut.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInterUtil.lo `test -f 'RSTInterUtil.c' || echo './'`RSTInterUtil.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTInterUtil.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTInterUtil.c: In function ‘SetCheckDir’: RSTInterUtil.c:208:7: warning: variable ‘PACKEDSIZE_DIRnofentries’ set but not used [-Wunused-but-set-variable] 208 | PACKEDSIZE_DIRnofentries, REALSIZE_DIRnofentries; | ^~~~~~~~~~~~~~~~~~~~~~~~ RSTInterUtil.c:207:7: warning: variable ‘PACKEDdirentrylen’ set but not used [-Wunused-but-set-variable] 207 | PACKEDdirentrylen, REALdirentrylen, | ^~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTQuery.lo `test -f 'RSTQuery.c' || echo './'`RSTQuery.c In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21, from RStarTree.h:28, from RSTQuery.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libcSmRST.la libcSmRST_la-RStarTree.lo libcSmRST_la-RSTInstDel.lo libcSmRST_la-RSTJoin.lo libcSmRST_la-RSTUtil.lo libcSmRST_la-RSTInOut.lo libcSmRST_la-RSTInterUtil.lo libcSmRST_la-RSTQuery.lo make[4]: Leaving directory '/<>/modules/RStarTree' Making all in kdt make[4]: Entering directory '/<>/modules/kdt' mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o xyz2kdt-xyz2kdt.o `test -f 'xyz2kdt.c' || echo './'`xyz2kdt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from xyz2kdt.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libkdt_la-kdt.lo `test -f 'kdt.c' || echo './'`kdt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdt.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ kdt.c:450:13: warning: ‘kdt_rect_write’ defined but not used [-Wunused-function] 450 | static void kdt_rect_write (const KdtRect rect, FILE * fp) | ^~~~~~~~~~~~~~ kdt.c:252:13: warning: ‘kdt_write’ defined but not used [-Wunused-function] 252 | static void kdt_write (KdtHeap * h, FILE * fp) | ^~~~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libkdt.la libkdt_la-kdt.lo /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o xyz2kdt xyz2kdt-xyz2kdt.o -lkdt -lm mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdt2kdt-kdt2kdt.o `test -f 'kdt2kdt.c' || echo './'`kdt2kdt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdt2kdt.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o kdt2kdt kdt2kdt-kdt2kdt.o -lkdt -lm mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdtquery-kdtquery.o `test -f 'kdtquery.c' || echo './'`kdtquery.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdtquery.c:21: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o kdtquery kdtquery-kdtquery.o -lkdt -lm make[4]: Leaving directory '/<>/modules/kdt' Making all in fes2004 make[4]: Entering directory '/<>/modules/fes2004' /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_alloc.lo `test -f 'fes2004_alloc.c' || echo './'`fes2004_alloc.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from fes2004_lib.h:12, from fes2004_alloc.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_error.lo `test -f 'fes2004_error.c' || echo './'`fes2004_error.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from fes2004_error.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fes2004_error.c:4:6: warning: no previous prototype for ‘print_error_1’ [-Wmissing-prototypes] 4 | void print_error_1() | ^~~~~~~~~~~~~ fes2004_error.c:11:6: warning: no previous prototype for ‘print_error_2’ [-Wmissing-prototypes] 11 | void print_error_2() | ^~~~~~~~~~~~~ fes2004_error.c:18:6: warning: no previous prototype for ‘print_error_3’ [-Wmissing-prototypes] 18 | void print_error_3(char *message) | ^~~~~~~~~~~~~ fes2004_error.c:25:6: warning: no previous prototype for ‘print_error_4’ [-Wmissing-prototypes] 25 | void print_error_4(char *message) | ^~~~~~~~~~~~~ fes2004_error.c:32:6: warning: no previous prototype for ‘print_error_5’ [-Wmissing-prototypes] 32 | void print_error_5(char *message) | ^~~~~~~~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_extraction.lo `test -f 'fes2004_extraction.c' || echo './'`fes2004_extraction.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from fes2004_lib.h:12, from fes2004_extraction.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_init.lo `test -f 'fes2004_init.c' || echo './'`fes2004_init.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from fes2004_lib.h:12, from fes2004_init.c:2: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fes2004_init.c: In function ‘init_spectrum’: fes2004_init.c:42:7: warning: variable ‘rstatus’ set but not used [-Wunused-but-set-variable] 42 | int rstatus; | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_io.lo `test -f 'fes2004_io.c' || echo './'`fes2004_io.c In file included from /usr/include/errno.h:25, from /usr/include/netcdf.h:17, from fes2004_io.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fes2004_io.c: In function ‘load_netcdf_fes2004_data’: fes2004_io.c:16:9: warning: variable ‘rstatus’ set but not used [-Wunused-but-set-variable] 16 | int i,rstatus; | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_prediction.lo `test -f 'fes2004_prediction.c' || echo './'`fes2004_prediction.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from fes2004_lib.h:12, from fes2004_prediction.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_kernel.lo `test -f 'fes2004_kernel.c' || echo './'`fes2004_kernel.c In file included from /usr/include/errno.h:25, from /usr/include/netcdf.h:17, from fes2004_kernel.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fes2004_kernel.c: In function ‘pred_coeur’: fes2004_kernel.c:115:10: warning: variable ‘pi’ set but not used [-Wunused-but-set-variable] 115 | double pi; | ^~ fes2004_kernel.c: In function ‘extract_coeur’: fes2004_kernel.c:191:10: warning: variable ‘pi’ set but not used [-Wunused-but-set-variable] 191 | double pi; | ^~ fes2004_kernel.c: In function ‘compute_admittance’: fes2004_kernel.c:457:11: warning: variable ‘gsl_out’ set but not used [-Wunused-but-set-variable] 457 | int i,n,gsl_out; | ^~~~~~~ fes2004_kernel.c: In function ‘astronomic_angle’: fes2004_kernel.c:663:16: warning: variable ‘sin2I’ set but not used [-Wunused-but-set-variable] 663 | double t2,t4,sin2I,s2; | ^~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libfes.la libfes_la-fes2004_alloc.lo libfes_la-fes2004_error.lo libfes_la-fes2004_extraction.lo libfes_la-fes2004_init.lo libfes_la-fes2004_io.lo libfes_la-fes2004_prediction.lo libfes_la-fes2004_kernel.lo make[4]: Leaving directory '/<>/modules/fes2004' Making all in wavewatch make[4]: Entering directory '/<>/modules/wavewatch' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/modules/wavewatch' Making all in culvert make[4]: Entering directory '/<>/modules/culvert' mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_inlet-check_inlet.o `test -f 'check_inlet.c' || echo './'`check_inlet.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from check_inlet.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libboyd87_la-boyd87.lo `test -f 'boyd87.c' || echo './'`boyd87.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from boyd87.c:9: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libboyd87.la libboyd87_la-boyd87.lo /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_inlet check_inlet-check_inlet.o -lboyd87 -lm mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_outlet-check_outlet.o `test -f 'check_outlet.c' || echo './'`check_outlet.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from check_outlet.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_outlet check_outlet-check_outlet.o -lboyd87 -lm mpicc -DHAVE_CONFIG_H -I. -I../.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o discharge_table-discharge_table.o `test -f 'discharge_table.c' || echo './'`discharge_table.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from discharge_table.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o discharge_table discharge_table-discharge_table.o -lboyd87 -lm make[4]: Leaving directory '/<>/modules/culvert' make[4]: Entering directory '/<>/modules' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface2kdt.o `test -f 'rsurface2kdt.c' || echo './'`rsurface2kdt.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rsurface2kdt.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface.o `test -f 'rsurface.c' || echo './'`rsurface.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rsurface.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from rsurface.c:5: rsurface.h:16:1: warning: no semicolon at end of struct or union 16 | } RSurfaceSum; | ^ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o rsurface2kdt rsurface2kdt-rsurface2kdt.o rsurface2kdt-rsurface.o -LRStarTree -lcSmRST -Lkdt -lkdt -lm libtool: warning: '-version-info' is ignored for programs libtool: warning: '-release' is ignored for programs /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon2D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particulatecommon.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libparticulatecommon2D.la libparticulatecommon2D_la-particulatecommon.lo libtool: warning: '-version-info/-version-number' is ignored for convenience libraries libtool: warning: '-release' is ignored for convenience libraries /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon3D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particulatecommon.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libparticulatecommon3D.la libparticulatecommon3D_la-particulatecommon.lo libtool: warning: '-version-info/-version-number' is ignored for convenience libraries libtool: warning: '-release' is ignored for convenience libraries /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libterrain2D_la-terrain.lo `test -f 'terrain.c' || echo './'`terrain.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from terrain.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ terrain.c: In function ‘polygon_contains’: terrain.c:253:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] 253 | if (right (&p->p[0].x, &p->p[1].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:253:7: note: referencing argument 1 of type ‘const double[2]’ terrain.c:253:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:253:7: note: referencing argument 2 of type ‘const double[2]’ terrain.c:253:7: note: referencing argument 3 of type ‘const double[2]’ terrain.c:246:17: note: in a call to function ‘right’ 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:255:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] 255 | if (right (&p->p[1].x, &p->p[2].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:255:7: note: referencing argument 1 of type ‘const double[2]’ terrain.c:255:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:255:7: note: referencing argument 2 of type ‘const double[2]’ terrain.c:255:7: note: referencing argument 3 of type ‘const double[2]’ terrain.c:246:17: note: in a call to function ‘right’ 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:257:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] 257 | if (right (&p->p[2].x, &p->p[3].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:257:7: note: referencing argument 1 of type ‘const double[2]’ terrain.c:257:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:257:7: note: referencing argument 2 of type ‘const double[2]’ terrain.c:257:7: note: referencing argument 3 of type ‘const double[2]’ terrain.c:246:17: note: in a call to function ‘right’ 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:259:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] 259 | if (right (&p->p[3].x, &p->p[0].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:259:7: note: referencing argument 1 of type ‘const double[2]’ terrain.c:259:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:259:7: note: referencing argument 2 of type ‘const double[2]’ terrain.c:259:7: note: referencing argument 3 of type ‘const double[2]’ terrain.c:246:17: note: in a call to function ‘right’ 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libterrain2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libterrain2D_la-terrain.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lkdt -lkdt -lm /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o terrain.lo terrain.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from terrain.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ terrain.c: In function ‘polygon_contains’: terrain.c:253:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] 253 | if (right (&p->p[0].x, &p->p[1].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:253:7: note: referencing argument 1 of type ‘const double[2]’ terrain.c:253:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:253:7: note: referencing argument 2 of type ‘const double[2]’ terrain.c:253:7: note: referencing argument 3 of type ‘const double[2]’ terrain.c:246:17: note: in a call to function ‘right’ 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:255:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] 255 | if (right (&p->p[1].x, &p->p[2].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:255:7: note: referencing argument 1 of type ‘const double[2]’ terrain.c:255:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:255:7: note: referencing argument 2 of type ‘const double[2]’ terrain.c:255:7: note: referencing argument 3 of type ‘const double[2]’ terrain.c:246:17: note: in a call to function ‘right’ 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:257:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] 257 | if (right (&p->p[2].x, &p->p[3].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:257:7: note: referencing argument 1 of type ‘const double[2]’ terrain.c:257:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:257:7: note: referencing argument 2 of type ‘const double[2]’ terrain.c:257:7: note: referencing argument 3 of type ‘const double[2]’ terrain.c:246:17: note: in a call to function ‘right’ 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:259:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] 259 | if (right (&p->p[3].x, &p->p[0].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:259:7: note: referencing argument 1 of type ‘const double[2]’ terrain.c:259:7: warning: ‘right’ reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:259:7: note: referencing argument 2 of type ‘const double[2]’ terrain.c:259:7: note: referencing argument 3 of type ‘const double[2]’ terrain.c:246:17: note: in a call to function ‘right’ 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libterrain3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris terrain.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lkdt -lkdt -lm /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates2D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from particulates.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libparticulates2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates2D_la-particulates.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates3D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from particulates.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libparticulates3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates3D_la-particulates.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada2D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/event.h:27, from okada.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libokada2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada2D_la-okada.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada3D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/event.h:27, from okada.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libokada3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada3D_la-okada.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libdf33D_la-df3.lo `test -f 'df3.c' || echo './'`df3.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from df3.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libdf33D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libdf33D_la-df3.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro2D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from electrohydro.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libelectrohydro2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro2D_la-electrohydro.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro3D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from electrohydro.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libelectrohydro3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro3D_la-electrohydro.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric2D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from skewsymmetric.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ skewsymmetric.c: In function ‘gfs_skew_symmetric_run’: skewsymmetric.c:591:23: warning: variable ‘res’ set but not used [-Wunused-but-set-variable] 591 | GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION]; | ^~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libskewsymmetric2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric2D_la-skewsymmetric.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric3D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from skewsymmetric.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ skewsymmetric.c: In function ‘gfs_skew_symmetric_run’: skewsymmetric.c:591:23: warning: variable ‘res’ set but not used [-Wunused-but-set-variable] 591 | GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION]; | ^~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libskewsymmetric3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric3D_la-skewsymmetric.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics2D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/solid.h:23, from topics.c:21: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ../src/timestep.h:29, from ../src/simulation.h:28, from ../src/event.h:53, from ../src/solid.h:26: topics.c: In function ‘print_interface’: topics.c:1139:38: warning: array subscript 2 is above array bounds of ‘GfsVariable *[2]’ {aka ‘struct _GfsVariable *[2]’} [-Warray-bounds=] 1139 | double nz = GFS_VALUE(cell, tv->m[2]); ../src/variable.h:76:74: note: in definition of macro ‘GFS_VALUE’ 76 | #define GFS_VALUE(cell,v) ((&GFS_STATE (cell)->place_holder)[(v)->i]) | ^ In file included from topics.c:23: ../src/vof.h:77:17: note: while referencing ‘m’ 77 | GfsVariable * m[FTT_DIMENSION], * alpha; | ^ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libtopics2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics2D_la-topics.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics3D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/solid.h:23, from topics.c:21: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libtopics3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics3D_la-topics.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libculvert2D_la-culvert.lo `test -f 'culvert.c' || echo './'`culvert.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/source.h:27, from ../src/river.h:27, from culvert.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libculvert2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libculvert2D_la-culvert.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lculvert -lboyd87 -lm /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o liblayered2D_la-layered.lo `test -f 'layered.c' || echo './'`layered.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from layered.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o liblayered2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris liblayered2D_la-layered.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide2D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tide.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libtide2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide2D_la-tide.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide3D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tide.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libtide3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide3D_la-tide.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes2D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from stokes.c:19: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=F77 --mode=compile f77 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -c -o CW263.lo CW263.f CW263.f:45:72: 45 | 31 write(*,'(f9.3,8f8.3,1x,a)') xx,yy,uu,vv,ut,vt,du,dv,etah,ans | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 31 at (1) CW263.f:61:72: 61 | 32 write(*,'(f9.3,8f8.3,1x,1a)') xx,yy,uu,vv,ut,vt,du,dv,etah | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1) CW263.f:73:72: 73 | 33 write(*,'(f9.3,8f8.3)') xx,etah,uu,vv,ut,vt,du,dv,etah | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 33 at (1) CW263.f:126:72: 126 | 10 amp(i)= 0.0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:155:72: 155 | 14 amp(i)= (h/hm)*amp(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1) CW263.f:209:72: 209 | do 10 j=1,nfun-1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) CW263.f:210:72: 210 | 10 x(i)= x(i)+cos(j*th)*amp(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:217:72: 217 | 11 etas(i)= eta(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1) CW263.f:219:72: 219 | 12 etas(nfun+i)= eta(nfun-i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1) CW263.f:253:72: 253 | 40 eta(i)= x(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) CW263.f:257:72: 257 | 10 sm= sm+eta(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:272:72: 272 | do 18 j=1,nfun-2 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 18 at (1) CW263.f:296:72: 296 | do 23 n=1,nfun | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 23 at (1) CW263.f:304:72: 304 | 23 shcs(i,n)= sh*cs | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 23 at (1) CW263.f:311:72: 311 | do 12 j=2,nfun | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 12 at (1) CW263.f:314:72: 314 | 12 df(i,j)= chcs(i,n)*n*k | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1) CW263.f:320:72: 320 | do 41 j=1,nfun-2 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 41 at (1) CW263.f:323:72: 323 | 42 dij= dij+da(i,n)*dex(n,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 42 at (1) CW263.f:324:72: 324 | 41 dax(i,j)= dij | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 41 at (1) CW263.f:331:72: 331 | 13 sm= sm+da(i,m)*s(m)/k | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1) CW263.f:332:72: 332 | 19 dax(i,nfun-1)= sm | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 19 at (1) CW263.f:340:72: 340 | do 24 j=1,nfun-1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 24 at (1) CW263.f:345:72: 345 | 24 dcx(i,j)= r*dax(i,j)+a(i)*drx | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 24 at (1) CW263.f:354:72: 354 | 15 sv= sv+n*k*c(n+1)*shsn(i,n) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 15 at (1) CW263.f:356:72: 356 | 14 vs(i)= sv | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1) CW263.f:360:72: 360 | 16 sm= sm+f(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1) CW263.f:365:72: 365 | 17 sq= sq+f(i)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 17 at (1) CW263.f:376:72: 376 | 22 sv= sv+n*k*dcx(n+1,j)*shsn(i,n)+(n*k)**2*c(n+1)*chsn(i,n)*dex(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 22 at (1) CW263.f:378:72: 378 | 21 dvx(i,j)= sv | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 21 at (1) CW263.f:386:72: 386 | : n**2*k*s(i)*c(n+1)*chsn(i,n) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 25 at (1) CW263.f:388:72: 388 | 20 dvx(i,j)= sv | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) CW263.f:393:72: 393 | do 44 j=1,nfun-1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 44 at (1) CW263.f:394:72: 394 | 44 dfx(i,j)= (us(i)*dux(i,j)+vs(i)*dvx(i,j))/g+dex(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 44 at (1) CW263.f:399:72: 399 | 46 sm= sm+dfx(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 46 at (1) CW263.f:401:72: 401 | do 45 i=1,nfun | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 45 at (1) CW263.f:402:72: 402 | 45 jac(i,j)= dfx(i,j)-sm | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 45 at (1) CW263.f:419:72: 419 | do 10 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) CW263.f:420:72: 420 | 10 c(i,j)= 0.0d0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:424:72: 424 | 54 st= st+f(i,1)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 54 at (1) CW263.f:428:72: 428 | 16 g(i,1)= f(i,1)/st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1) CW263.f:435:72: 435 | 20 st= st+g(i,j)*f(i,k) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) CW263.f:436:72: 436 | 29 c(j,k)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 29 at (1) CW263.f:441:72: 441 | 22 st= st+c(j,k)*g(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 22 at (1) CW263.f:442:72: 442 | 21 g(i,k)= f(i,k)-st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 21 at (1) CW263.f:445:72: 445 | 50 st= st+g(i,k)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1) CW263.f:448:72: 448 | 52 g(i,k)= g(i,k)/st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 52 at (1) CW263.f:453:72: 453 | 202 st= st+g(i,j)*g(i,k) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 202 at (1) CW263.f:454:72: 454 | 200 db(j)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1) CW263.f:458:72: 458 | 206 st= st+db(j)*g(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 206 at (1) CW263.f:459:72: 459 | 204 g(i,k)=g(i,k)-st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 204 at (1) CW263.f:464:72: 464 | 26 st= st+g(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 26 at (1) CW263.f:465:72: 465 | 24 b(j)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 24 at (1) CW263.f:470:72: 470 | 210 sb= sb+b(j)*g(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1) CW263.f:471:72: 471 | 208 st= st+(sb-1.0d0)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 208 at (1) CW263.f:476:72: 476 | 30 st= st+cr(i,j)*b(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1) CW263.f:477:72: 477 | 28 a(i)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 28 at (1) CW263.f:482:72: 482 | 74 sb= sb+a(j)*f(i,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 74 at (1) CW263.f:483:72: 483 | 72 st= st+(sb-1.0d0)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 72 at (1) CW263.f:487:72: 487 | do 81 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 81 at (1) CW263.f:488:72: 488 | 81 dc(i,j)= 0.0d0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 81 at (1) CW263.f:493:72: 493 | : -0.5d0*dly(1)*c(1,j)/c(1,1)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 82 at (1) CW263.f:498:72: 498 | 86 st= st+c(m,l)*dc(m,l) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 86 at (1) CW263.f:506:72: 506 | 90 st= st+c(j,m)*dc(j,l)+dc(j,m)*c(j,l) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1) CW263.f:508:72: 508 | : -st/c(l,l)-0.5d0*dly(l)*c(l,m)/c(l,l)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 85 at (1) CW263.f:511:72: 511 | do 92 m=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 92 at (1) CW263.f:514:72: 514 | 96 st= st+g(l,j)*dc(j,m) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 96 at (1) CW263.f:515:72: 515 | 92 br(l,m)= -st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 92 at (1) CW263.f:517:72: 517 | 94 br(k,m)= br(k,m)+df(k,m) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 94 at (1) CW263.f:523:72: 523 | 36 st= st+br(i,l)*cr(l,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 36 at (1) CW263.f:524:72: 524 | 34 sb= sb+st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 34 at (1) CW263.f:525:72: 525 | 32 db(j)= sb | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1) CW263.f:529:72: 529 | 40 st= st-dc(i,j)*a(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) CW263.f:530:72: 530 | 38 dly(i)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 38 at (1) CW263.f:534:72: 534 | 44 st= st+cr(i,j)*dly(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 44 at (1) CW263.f:535:72: 535 | 42 da(i,k)= st | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 42 at (1) CW263.f:550:72: 550 | do 10 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) CW263.f:551:72: 551 | 10 w(i,j)= 0.0d0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:562:72: 562 | 14 sum= sum+c(i,m)*w(m,j)/c(m,m) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1) CW263.f:563:72: 563 | 13 w(i,j)= -sum | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1) CW263.f:567:72: 567 | do 16 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 16 at (1) CW263.f:568:72: 568 | 16 w(i,j)= w(i,j)/sum | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1) CW263.f:632:72: 632 | 4 a(k,j)= a(k,j)/c | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 4 at (1) CW263.f:637:72: 637 | 5 a(i,j)= a(i,j)-c*a(k,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 5 at (1) CW263.f:638:72: 638 | 10 b(i)= b(i)-c*b(k) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:648:72: 648 | do 200 j=k1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1) CW263.f:649:72: 649 | 200 b(k)= b(k)-a(k,j)*b(j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1) CW263.f:651:72: 651 | 300 cc(i)= b(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1) CW263.f:676:72: 676 | 16 xcm(i)= xc(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1) CW263.f:687:72: 687 | 18 xc(i)= xcm(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 18 at (1) CW263.f:694:72: 694 | do 10 j=1,nv | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) CW263.f:697:72: 697 | 11 ra= ra+fjacc(l,i)*fjacc(l,j) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1) CW263.f:698:72: 698 | 10 aa(i,j)= ra | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:703:72: 703 | 13 ra= ra+fvecc(l)*fjacc(l,i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1) CW263.f:704:72: 704 | 12 bb(i)= -ra | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1) CW263.f:711:72: 711 | 14 xc(i)= xc(i)+orf*cc(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1) CW263.f:745:72: 745 | 10 sm=sm+f(i)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:822:72: 822 | 12 um= t*ul-u0+f(m) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1) CW263.f:824:72: 824 | 10 b(k)= s*vl*um*rn | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) CW263.f:856:72: 856 | 11 etah= etah+cos(i*theta)*amp(i) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1) CW263.f:873:72: 873 | 10 s4= s4+i*i*sh*cs*c(ip) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) /bin/bash ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libstokes2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes2D_la-stokes.lo CW263.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes3D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from stokes.c:19: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=F77 --mode=link f77 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libstokes3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes3D_la-stokes.lo CW263.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles2D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from bubbles.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ bubbles.c: In function ‘bubble_fraction_init’: bubbles.c:421:48: warning: assignment to ‘void (*)(FttCell *, GfsVariable *, GfsParticulate *)’ {aka ‘void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)’} from incompatible pointer type ‘void (*)(FttCell *, BubbleData *)’ {aka ‘void (*)(struct _FttCell *, BubbleData *)’} [-Wincompatible-pointer-types] 421 | GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles; | ^ bubbles.c: In function ‘bubble_fraction_dt_init’: bubbles.c:474:48: warning: assignment to ‘void (*)(FttCell *, GfsVariable *, GfsParticulate *)’ {aka ‘void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)’} from incompatible pointer type ‘void (*)(FttCell *, BubbleData *)’ {aka ‘void (*)(struct _FttCell *, BubbleData *)’} [-Wincompatible-pointer-types] 474 | GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles; | ^ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libbubbles2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles2D_la-bubbles.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm /bin/bash ../libtool --silent --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles3D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from bubbles.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ bubbles.c: In function ‘bubble_fraction_init’: bubbles.c:421:48: warning: assignment to ‘void (*)(FttCell *, GfsVariable *, GfsParticulate *)’ {aka ‘void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)’} from incompatible pointer type ‘void (*)(FttCell *, BubbleData *)’ {aka ‘void (*)(struct _FttCell *, BubbleData *)’} [-Wincompatible-pointer-types] 421 | GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles; | ^ bubbles.c: In function ‘bubble_fraction_dt_init’: bubbles.c:474:48: warning: assignment to ‘void (*)(FttCell *, GfsVariable *, GfsParticulate *)’ {aka ‘void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)’} from incompatible pointer type ‘void (*)(FttCell *, BubbleData *)’ {aka ‘void (*)(struct _FttCell *, BubbleData *)’} [-Wincompatible-pointer-types] 474 | GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles; | ^ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libbubbles3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles3D_la-bubbles.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm make[4]: Leaving directory '/<>/modules' make[3]: Leaving directory '/<>/modules' Making all in tools make[3]: Entering directory '/<>/tools' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl2D-gfs2oogl.o `test -f 'gfs2oogl.c' || echo './'`gfs2oogl.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfs2oogl.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfs2oogl.c: In function ‘main’: gfs2oogl.c:891:7: warning: ‘g_basename’ is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations] 891 | streamname = g_strdup (g_basename (optarg)); | ^~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:50, from /usr/include/gts.h:24, from ../src/init.h:23, from gfs2oogl.c:31: /usr/include/glib-2.0/glib/gfileutils.h:207:14: note: declared here 207 | const gchar *g_basename (const gchar *file_name); | ^~~~~~~~~~ gfs2oogl.c:706:28: warning: variable ‘lines’ set but not used [-Wunused-but-set-variable] 706 | gboolean ribbon = FALSE, lines = FALSE, squares = FALSE; | ^~~~~ gfs2oogl.c:706:12: warning: variable ‘ribbon’ set but not used [-Wunused-but-set-variable] 706 | gboolean ribbon = FALSE, lines = FALSE, squares = FALSE; | ^~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gfs2oogl2D gfs2oogl2D-gfs2oogl.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl.o gfs2oogl.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfs2oogl.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfs2oogl.c: In function ‘main’: gfs2oogl.c:891:7: warning: ‘g_basename’ is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations] 891 | streamname = g_strdup (g_basename (optarg)); | ^~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:50, from /usr/include/gts.h:24, from ../src/init.h:23, from gfs2oogl.c:31: /usr/include/glib-2.0/glib/gfileutils.h:207:14: note: declared here 207 | const gchar *g_basename (const gchar *file_name); | ^~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gfs2oogl3D gfs2oogl.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o streamanime.o streamanime.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from streamanime.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o streamanime streamanime.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ppmcombine-ppmcombine.o `test -f 'ppmcombine.c' || echo './'`ppmcombine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ppmcombine.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ppmcombine.c: In function ‘main’: ppmcombine.c:36:12: warning: variable ‘verbose’ set but not used [-Wunused-but-set-variable] 36 | gboolean verbose = FALSE; | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ppmcombine ppmcombine-ppmcombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare2D-gfscompare.o `test -f 'gfscompare.c' || echo './'`gfscompare.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscompare.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfscompare.c: In function ‘main’: gfscompare.c:319:12: warning: variable ‘no_check’ set but not used [-Wunused-but-set-variable] 319 | gboolean no_check = FALSE; | ^~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gfscompare2D gfscompare2D-gfscompare.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare.o gfscompare.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscompare.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfscompare.c: In function ‘main’: gfscompare.c:319:12: warning: variable ‘no_check’ set but not used [-Wunused-but-set-variable] 319 | gboolean no_check = FALSE; | ^~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gfscompare3D gfscompare.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine2D-gfscombine.o `test -f 'gfscombine.c' || echo './'`gfscombine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscombine.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gfscombine2D gfscombine2D-gfscombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine.o gfscombine.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscombine.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gfscombine3D gfscombine.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2D-gfsjoin2.o `test -f 'gfsjoin2.c' || echo './'`gfsjoin2.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gfsjoin2.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gfsjoin2D gfsjoin2D-gfsjoin2.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2.o gfsjoin2.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gfsjoin2.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o gfsjoin3D gfsjoin2.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o shapes.o shapes.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from shapes.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ shapes.c:288:13: warning: ‘surface_add_rectangular_channel_shape’ defined but not used [-Wunused-function] 288 | static void surface_add_rectangular_channel_shape (GtsSurface * s, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o shapes shapes.o -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 make[3]: Leaving directory '/<>/tools' Making all in test make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/test' Making all in doc make[3]: Entering directory '/<>/doc' ls ../src/*.[ch] | awk 'BEGIN{print "reference: \\"}{ print "\t" $1 " \\"}' > Makefile.deps Making all in tutorial make[4]: Entering directory '/<>/doc/tutorial' awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/doc/tutorial' Making all in examples make[4]: Entering directory '/<>/doc/examples' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-classes.o `test -f 'classes.c' || echo './'`classes.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from classes.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-init.o `test -f '../../src/init.c' || echo './'`../../src/init.c ../../src/init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from ../../src/init.c:34: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o classes classes-classes.o classes-init.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o modules-modules.o `test -f 'modules.c' || echo './'`modules.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/13/include/limits.h:205, from /usr/lib/gcc/arm-linux-gnueabihf/13/include/syslimits.h:7, from /usr/lib/gcc/arm-linux-gnueabihf/13/include/limits.h:34, from /usr/lib/arm-linux-gnueabihf/glib-2.0/include/glibconfig.h:11, from /usr/include/glib-2.0/glib/gtypes.h:34, from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/glib-2.0/gmodule.h:30, from modules.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o modules modules-modules.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 ./modules ../../modules/*.la /usr/lib/arm-linux-gnueabihf/gerris/*.so | LC_ALL=C sort | uniq > modules.list (./classes && sh ./modulesyms.sh ../../modules /usr/lib/arm-linux-gnueabihf/gerris) | LC_ALL=C sort > gerris.dic echo "# Language file for source-highlight" > gfs.lang echo "# Generated automatically by classes.c" >> gfs.lang awk '{ printf ("classname = \"%s\"\n", $1) }' < gerris.dic >> gfs.lang echo "include \"/usr/share/source-highlight/cpp.lang\"" >> gfs.lang echo "comment start \"#\"" >> gfs.lang echo "redef preproc = \"C preprocessor command is not compatible with the use of # as comment character in GTS\"" >> gfs.lang echo "(defvar gfs-abbrevs '(" > gfs-keywords.el awk '{ printf ("\"%s\"\n", $1) }' < gerris.dic >> gfs-keywords.el echo ")" >> gfs-keywords.el echo "\"Gerris keywords automatically generated by classes.c.\")" >> gfs-keywords.el echo "(defvar gfs-modules '(" >> gfs-keywords.el awk '{ printf ("\"%s\"\n", $1) }' < modules.list >> gfs-keywords.el echo ")" >> gfs-keywords.el echo "\"Gerris modules automatically generated by modules.c.\")" >> gfs-keywords.el echo "(provide 'gfs-keywords)" >> gfs-keywords.el sh ./gfs.php.sh > gfs.php make all-am make[5]: Entering directory '/<>/doc/examples' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/<>/doc/examples' make[4]: Leaving directory '/<>/doc/examples' Making all in manpages make[4]: Entering directory '/<>/doc/manpages' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/doc/manpages' make[4]: Entering directory '/<>/doc' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../src -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-autoclass.o `test -f 'autoclass.c' || echo './'`autoclass.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from autoclass.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ autoclass.c: In function ‘main’: autoclass.c:6:21: warning: variable ‘klass’ set but not used [-Wunused-but-set-variable] 6 | GtsObjectClass ** klass; | ^~~~~ mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -pthread -I../src -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-init.o `test -f '../src/init.c' || echo './'`../src/init.c ../src/init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from ../src/init.c:34: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /bin/bash ../libtool --silent --tag=CC --mode=link mpicc -DFTT_2D=1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/gerris-20131206+dfsg-19.1build2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o autoclass autoclass-autoclass.o autoclass-init.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lglib-2.0 make[4]: Leaving directory '/<>/doc' make[3]: Leaving directory '/<>/doc' Making all in desktop make[3]: Entering directory '/<>/desktop' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/desktop' Making all in debian make[3]: Entering directory '/<>/debian' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/debian' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install make -j1 install DESTDIR=/<>/gerris-20131206\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-am make[4]: Entering directory '/<>/src' make[5]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../libtool --silent --mode=install /usr/bin/install -c libgfs2D.la libgfs3D.la '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --silent --mode=install /usr/bin/install -c gerris2D gerris3D '/<>/debian/tmp/usr/bin' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' /usr/bin/mkdir -p '/<>/debian/tmp/usr/include' /usr/bin/install -c -m 644 gfs.h '/<>/debian/tmp/usr/include' /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 gerris2D.pc gerris3D.pc '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/gerris' /usr/bin/install -c -m 644 m4.awk '/<>/debian/tmp/usr/share/gerris' /usr/bin/mkdir -p '/<>/debian/tmp/usr/include/gerris' /usr/bin/install -c -m 644 ftt.h fluid.h variable.h output.h solid.h poisson.h advection.h boundary.h mpi_boundary.h timestep.h domain.h init.h refine.h event.h simulation.h graphic.h adaptive.h source.h tension.h vof.h utils.h ocean.h wave.h levelset.h isocube.h cartesian.h surface.h unstructured.h map.h river.h moving.h balance.h metric.h particle.h version.h spatial.h function.h '/<>/debian/tmp/usr/include/gerris' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in modules make[3]: Entering directory '/<>/modules' Making install in RStarTree make[4]: Entering directory '/<>/modules/RStarTree' make[5]: Entering directory '/<>/modules/RStarTree' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/modules/RStarTree' make[4]: Leaving directory '/<>/modules/RStarTree' Making install in kdt make[4]: Entering directory '/<>/modules/kdt' make[5]: Entering directory '/<>/modules/kdt' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../../libtool --silent --mode=install /usr/bin/install -c xyz2kdt kdt2kdt kdtquery '/<>/debian/tmp/usr/bin' make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/modules/kdt' make[4]: Leaving directory '/<>/modules/kdt' Making install in fes2004 make[4]: Entering directory '/<>/modules/fes2004' make[5]: Entering directory '/<>/modules/fes2004' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/modules/fes2004' make[4]: Leaving directory '/<>/modules/fes2004' Making install in wavewatch make[4]: Entering directory '/<>/modules/wavewatch' make[5]: Entering directory '/<>/modules/wavewatch' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/modules/wavewatch' make[4]: Leaving directory '/<>/modules/wavewatch' Making install in culvert make[4]: Entering directory '/<>/modules/culvert' make[5]: Entering directory '/<>/modules/culvert' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/modules/culvert' make[4]: Leaving directory '/<>/modules/culvert' make[4]: Entering directory '/<>/modules' make[5]: Entering directory '/<>/modules' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --silent --mode=install /usr/bin/install -c rsurface2kdt '/<>/debian/tmp/usr/bin' /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris' /bin/bash ../libtool --silent --mode=install /usr/bin/install -c libterrain2D.la libterrain3D.la libparticulates2D.la libparticulates3D.la libokada2D.la libokada3D.la libdf33D.la libelectrohydro2D.la libelectrohydro3D.la libskewsymmetric2D.la libskewsymmetric3D.la libtopics2D.la libtopics3D.la libculvert2D.la liblayered2D.la libtide2D.la libtide3D.la libstokes2D.la libstokes3D.la libbubbles2D.la libbubbles3D.la '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris' libtool: warning: relinking 'libterrain2D.la' libtool: warning: relinking 'libterrain3D.la' libtool: warning: relinking 'libparticulates2D.la' libtool: warning: relinking 'libparticulates3D.la' libtool: warning: relinking 'libokada2D.la' libtool: warning: relinking 'libokada3D.la' libtool: warning: relinking 'libdf33D.la' libtool: warning: relinking 'libelectrohydro2D.la' libtool: warning: relinking 'libelectrohydro3D.la' libtool: warning: relinking 'libskewsymmetric2D.la' libtool: warning: relinking 'libskewsymmetric3D.la' libtool: warning: relinking 'libtopics2D.la' libtool: warning: relinking 'libtopics3D.la' libtool: warning: relinking 'libculvert2D.la' libtool: warning: relinking 'liblayered2D.la' libtool: warning: relinking 'libtide2D.la' libtool: warning: relinking 'libtide3D.la' libtool: warning: relinking 'libstokes2D.la' libtool: warning: relinking 'libstokes3D.la' libtool: warning: relinking 'libbubbles2D.la' libtool: warning: relinking 'libbubbles3D.la' libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf/gerris' make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/modules' make[4]: Leaving directory '/<>/modules' make[3]: Leaving directory '/<>/modules' Making install in tools make[3]: Entering directory '/<>/tools' make[4]: Entering directory '/<>/tools' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --silent --mode=install /usr/bin/install -c gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/<>/debian/tmp/usr/bin' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c darcs2dist bat2gts ppm2mpeg ppm2theora ppm2video gfs2gfs gfsjoin gfsplot '/<>/debian/tmp/usr/bin' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tools' make[3]: Leaving directory '/<>/tools' Making install in test make[3]: Entering directory '/<>/test' make[4]: Entering directory '/<>/test' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/test' make[3]: Leaving directory '/<>/test' Making install in doc make[3]: Entering directory '/<>/doc' Making install in tutorial make[4]: Entering directory '/<>/doc/tutorial' make[5]: Entering directory '/<>/doc/tutorial' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/doc/tutorial' make[4]: Leaving directory '/<>/doc/tutorial' Making install in examples make[4]: Entering directory '/<>/doc/examples' make install-am make[5]: Entering directory '/<>/doc/examples' make[6]: Entering directory '/<>/doc/examples' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c gfs2doc gfs-highlight gfsxref '/<>/debian/tmp/usr/bin' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/gerris' /usr/bin/install -c -m 644 gfs2tex.py gfs.lang gerris.dic gfs-keywords.el gfs-mode.el gfs.sty gfs.hva kaltura.sh gfs.php '/<>/debian/tmp/usr/share/gerris' make[6]: Leaving directory '/<>/doc/examples' make[5]: Leaving directory '/<>/doc/examples' make[4]: Leaving directory '/<>/doc/examples' Making install in manpages make[4]: Entering directory '/<>/doc/manpages' make[5]: Entering directory '/<>/doc/manpages' make[5]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 bat2gts.1 gerris2D.1 gerris3D.1 gfs2gfs.1 gfs2oogl2D.1 gfs2oogl3D.1 gfscompare2D.1 gfscompare3D.1 gfs-config.1 gfs-highlight.1 gfsjoin.1 gfsxref.1 ppm2mpeg.1 ppmcombine.1 rsurfacequery.1 rsurfaceinfo.1 shapes.1 streamanime.1 xyz2rsurface.1 gfsjoin2D.1 gfsjoin3D.1 '/<>/debian/tmp/usr/share/man/man1' make[5]: Leaving directory '/<>/doc/manpages' make[4]: Leaving directory '/<>/doc/manpages' make[4]: Entering directory '/<>/doc' make[5]: Entering directory '/<>/doc' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/doc' make[4]: Leaving directory '/<>/doc' make[3]: Leaving directory '/<>/doc' Making install in desktop make[3]: Entering directory '/<>/desktop' make[4]: Entering directory '/<>/desktop' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes' /usr/bin/install -c -m 644 application-gerris.png application-gerris-2D.png application-gerris-3D.png application-gerris-compressed.png '/<>/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/mime/packages' /usr/bin/install -c -m 644 gerris.xml '/<>/debian/tmp/usr/share/mime/packages' make[4]: Leaving directory '/<>/desktop' make[3]: Leaving directory '/<>/desktop' Making install in debian make[3]: Entering directory '/<>/debian' make[4]: Entering directory '/<>/debian' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/debian' make[3]: Leaving directory '/<>/debian' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/gerris' /usr/bin/install -c build_function libtool '/<>/debian/tmp/usr/share/gerris' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' find /<>/debian/ -name "*.la" | xargs rm -f sed -i -e "s/mpicc/gcc/g" /<>/debian/tmp/usr/share/gerris/build_function rm -rf /<>/debian/tmp/usr/bin/darcs2dist rm -rf /<>/debian/tmp/usr/bin/gfs2doc make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs ChangeLog make[1]: Leaving directory '/<>' dh_installman -a dh_lintian -a dh_icons -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/libgfs2D.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/arm-linux-gnueabihf/libgfs3D.a exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: gerris (10), libgfs-1.3-2t64 (4), libgfs-dev (5) * dh_installdocs: gerris (5), libgfs-1.3-2t64 (0), libgfs-dev (0) * dh_installman: gerris (0), libgfs-1.3-2t64 (0), libgfs-dev (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "arm-linux-gnueabihf", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz -a dh_strip -a debugedit: debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0: Unknown DWARF DW_FORM_0x1f21 cc4da805de591310ec2b6e5b3ec24b561fb2a575 debugedit: debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0: Unknown DWARF DW_FORM_0x1f21 af96c6f669b4446554e742eca361b8139fd627b6 debugedit: debian/gerris/usr/bin/shapes: Unknown DWARF DW_FORM_0x1f20 5dff9d170a74dee610dfd57fd7af73acb355af89 debugedit: debian/gerris/usr/bin/gfsjoin2D: Unknown DWARF DW_FORM_0x1f20 b5d0ac1013e42013e1a0b820cce07b639bdb96f2 debugedit: debian/gerris/usr/bin/gfscombine3D: Unknown DWARF DW_FORM_0x1f21 f49fdf8ed6d8d88ac8ed797d8848bceb26d270b1 debugedit: debian/gerris/usr/bin/streamanime: Unknown DWARF DW_FORM_0x1f20 0055b405792348bf48adb6f747cef120521d149d debugedit: debian/gerris/usr/bin/kdt2kdt: Unknown DWARF DW_FORM_0x1f20 f4554f19370e98faf09af73446da113a18ab1c96 debugedit: debian/gerris/usr/bin/gerris2D: Unknown DWARF DW_FORM_0x1f20 085e967a9280329b1fb4209baf012c3cdff8ef41 debugedit: debian/gerris/usr/bin/gfsjoin3D: Unknown DWARF DW_FORM_0x1f20 aafaee55328cf775ab835f09088b5f354b485d2e debugedit: debian/gerris/usr/bin/gfs2oogl3D: Unknown DWARF DW_FORM_0x1f21 26ebf1fdb9d3aa7850a46d3ce0d03c050966f4ae debugedit: debian/gerris/usr/bin/kdtquery: Unknown DWARF DW_FORM_0x1f21 0a6ecdb1b1e0a4b728a0de7af8cff2fd42bd7e15 debugedit: debian/gerris/usr/bin/gfscompare2D: Unknown DWARF DW_FORM_0x1f21 1496085450a12e149bbb6bb74e0d50b5897fb2cc debugedit: debian/gerris/usr/bin/gfscompare3D: Unknown DWARF DW_FORM_0x1f21 23a4ab40285a4d00eb485aeb948f41cae1f34048 debugedit: debian/gerris/usr/bin/ppmcombine: Unknown DWARF DW_FORM_0x1f20 1eed6faaa072c30507df6b9ce919b19b9b184a5b debugedit: debian/gerris/usr/bin/gfs2oogl2D: Unknown DWARF DW_FORM_0x1f21 63b4b65fc97888866757bfbfe029f4af77957634 debugedit: debian/gerris/usr/bin/gfscombine2D: Unknown DWARF DW_FORM_0x1f21 6949d9ceceb2b3705ce8b6cdda29c4b8ad937ffa debugedit: debian/gerris/usr/bin/rsurface2kdt: Unknown DWARF DW_FORM_0x1f20 d21ce87e98e5f6f7070c313f42e831f66c55796d debugedit: debian/gerris/usr/bin/gerris3D: Unknown DWARF DW_FORM_0x1f20 c6027e62c48e382f72326b414cc3165116c5851c debugedit: debian/gerris/usr/bin/xyz2kdt: Unknown DWARF DW_FORM_0x1f21 9afcd2197f69c4e0652a22ffd0954549a05542e4 debugedit: debian/libgfs-1.3-2t64/usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0: Unknown DWARF DW_FORM_0x1f21 d63e6332633fef23708c902c26a1d304437a7f4f debugedit: debian/libgfs-1.3-2t64/usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0: Unknown DWARF DW_FORM_0x1f21 09b781abb08223d2718259fe4b6b3cc97158caea dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Provides field of package libgfs-1.3-2t64: substitution variable ${t64:Provides} used, but is not defined dpkg-gencontrol: warning: Provides field of package libgfs-1.3-2t64: substitution variable ${t64:Provides} used, but is not defined dpkg-gencontrol: warning: Depends field of package libgfs-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 154 pkgstriptranslations: processing gerris (in debian/gerris); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/gerris/DEBIAN/control, package gerris, directory debian/gerris .. removing usr/share/doc/gerris/changelog.gz Searching for duplicated docs in dependency libgfs-1.3-2t64... symlinking changelog.Debian.gz in gerris to file in libgfs-1.3-2t64 pkgstripfiles: Running PNG optimization (using 1 cpus) for package gerris ... xargs: warning: options --max-lines and --replace/-I/-i are mutually exclusive, ignoring previous --max-lines value oooo pkgstripfiles: PNG optimization (4/0) for package gerris took 0 s dpkg-deb: building package 'gerris' in '../gerris_20131206+dfsg-19.1build2_armhf.deb'. INFO: pkgstriptranslations version 154 pkgstriptranslations: processing gerris-dbgsym (in debian/.debhelper/gerris/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/.debhelper/gerris/dbgsym-root/DEBIAN/control, package gerris-dbgsym, directory debian/.debhelper/gerris/dbgsym-root dpkg-deb: building package 'gerris-dbgsym' in 'debian/.debhelper/scratch-space/build-gerris/gerris-dbgsym_20131206+dfsg-19.1build2_armhf.deb'. Renaming gerris-dbgsym_20131206+dfsg-19.1build2_armhf.deb to gerris-dbgsym_20131206+dfsg-19.1build2_armhf.ddeb INFO: pkgstriptranslations version 154 pkgstriptranslations: processing libgfs-1.3-2t64 (in debian/libgfs-1.3-2t64); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/libgfs-1.3-2t64/DEBIAN/control, package libgfs-1.3-2t64, directory debian/libgfs-1.3-2t64 .. removing usr/share/doc/libgfs-1.3-2t64/changelog.gz pkgstripfiles: Running PNG optimization (using 1 cpus) for package libgfs-1.3-2t64 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgfs-1.3-2t64' in '../libgfs-1.3-2t64_20131206+dfsg-19.1build2_armhf.deb'. INFO: pkgstriptranslations version 154 pkgstriptranslations: processing libgfs-1.3-2t64-dbgsym (in debian/.debhelper/libgfs-1.3-2t64/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/.debhelper/libgfs-1.3-2t64/dbgsym-root/DEBIAN/control, package libgfs-1.3-2t64-dbgsym, directory debian/.debhelper/libgfs-1.3-2t64/dbgsym-root dpkg-deb: building package 'libgfs-1.3-2t64-dbgsym' in 'debian/.debhelper/scratch-space/build-libgfs-1.3-2t64/libgfs-1.3-2t64-dbgsym_20131206+dfsg-19.1build2_armhf.deb'. Renaming libgfs-1.3-2t64-dbgsym_20131206+dfsg-19.1build2_armhf.deb to libgfs-1.3-2t64-dbgsym_20131206+dfsg-19.1build2_armhf.ddeb INFO: pkgstriptranslations version 154 pkgstriptranslations: processing libgfs-dev (in debian/libgfs-dev); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/libgfs-dev/DEBIAN/control, package libgfs-dev, directory debian/libgfs-dev .. removing usr/share/doc/libgfs-dev/changelog.gz Searching for duplicated docs in dependency libgfs-1.3-2t64... symlinking changelog.Debian.gz in libgfs-dev to file in libgfs-1.3-2t64 pkgstripfiles: Running PNG optimization (using 1 cpus) for package libgfs-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgfs-dev' in '../libgfs-dev_20131206+dfsg-19.1build2_armhf.deb'. dpkg-genbuildinfo --build=any -O../gerris_20131206+dfsg-19.1build2_armhf.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../gerris_20131206+dfsg-19.1build2_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-05-13T08:09:55Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ gerris_20131206+dfsg-19.1build2_armhf.changes: ---------------------------------------------- Format: 1.8 Date: Sun, 31 Mar 2024 05:41:51 +0000 Source: gerris Binary: gerris libgfs-1.3-2t64 libgfs-dev Built-For-Profiles: noudeb Architecture: armhf Version: 20131206+dfsg-19.1build2 Distribution: noble Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Steve Langasek Description: gerris - Fluid Flow Solver libgfs-1.3-2t64 - Fluid Flow Solver -- shared libraries libgfs-dev - Fluid Flow Solver -- development libraries and headers Changes: gerris (20131206+dfsg-19.1build2) noble; urgency=medium . * No-change rebuild for CVE-2024-3094 Checksums-Sha1: 6351befd958ca18ab505842fd202f5a46ee8639c 325172 gerris-dbgsym_20131206+dfsg-19.1build2_armhf.ddeb 36321a5725fbf379cf0c628a16f2755387ecc9f0 12228 gerris_20131206+dfsg-19.1build2_armhf.buildinfo 89c5207cece8c35086781ffadd57b428e7a42217 221986 gerris_20131206+dfsg-19.1build2_armhf.deb 5a1a6e37b082c03038e567e0c0e8f117e50490cf 1970778 libgfs-1.3-2t64-dbgsym_20131206+dfsg-19.1build2_armhf.ddeb 3f6b0035724f640df453fa6e3cf4461fceaf5d9e 470752 libgfs-1.3-2t64_20131206+dfsg-19.1build2_armhf.deb b0dac8181f51515d97db5c11d19ad41f1b5dc714 32056 libgfs-dev_20131206+dfsg-19.1build2_armhf.deb Checksums-Sha256: e25dc024c4f91101873fd7f3734310058095bcc3fe39fdcac11e3140dc95b774 325172 gerris-dbgsym_20131206+dfsg-19.1build2_armhf.ddeb 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(= 3.7.0-0.3build1), libnl-route-3-200 (= 3.7.0-0.3build1), libnl-route-3-dev (= 3.7.0-0.3build1), libnuma-dev (= 2.0.18-1build1), libnuma1 (= 2.0.18-1build1), libopenmpi-dev (= 4.1.6-7ubuntu2), libopenmpi3t64 (= 4.1.6-7ubuntu2), libp11-kit0 (= 0.25.3-4ubuntu2), libpam-modules (= 1.5.3-5ubuntu5), libpam-modules-bin (= 1.5.3-5ubuntu5), libpam-runtime (= 1.5.3-5ubuntu5), libpam0g (= 1.5.3-5ubuntu5), libpciaccess0 (= 0.17-3build1), libpcre2-16-0 (= 10.42-4ubuntu2), libpcre2-32-0 (= 10.42-4ubuntu2), libpcre2-8-0 (= 10.42-4ubuntu2), libpcre2-dev (= 10.42-4ubuntu2), libpcre2-posix3 (= 10.42-4ubuntu2), libperl5.38t64 (= 5.38.2-3.2build2), libpipeline1 (= 1.5.7-2), libpkgconf3 (= 1.8.1-2build1), libpmix-dev (= 5.0.1-4.1build1), libpmix2t64 (= 5.0.1-4.1build1), libpsl5t64 (= 0.21.2-1.1build1), libpython3-stdlib (= 3.12.3-0ubuntu1), libpython3.12-minimal (= 3.12.3-1), libpython3.12-stdlib (= 3.12.3-1), librdmacm1t64 (= 50.0-2build2), libreadline8t64 (= 8.2-4build1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build7), libsasl2-2 (= 2.1.28+dfsg1-5ubuntu3), libsasl2-modules-db (= 2.1.28+dfsg1-5ubuntu3), libseccomp2 (= 2.5.5-1ubuntu3), libselinux1 (= 3.5-2ubuntu2), libselinux1-dev (= 3.5-2ubuntu2), libsemanage-common (= 3.5-1build5), libsemanage2 (= 3.5-1build5), libsepol-dev (= 3.5-2build1), libsepol2 (= 3.5-2build1), libsframe1 (= 2.42-4ubuntu2), libsmartcols1 (= 2.39.3-9ubuntu6), libsqlite3-0 (= 3.45.1-1ubuntu2), libssh-4 (= 0.10.6-2build2), libssl-dev (= 3.0.13-0ubuntu3), libssl3t64 (= 3.0.13-0ubuntu3), libstdc++-13-dev (= 13.2.0-23ubuntu4), libstdc++6 (= 14-20240412-0ubuntu1), libsub-override-perl (= 0.10-1), libsystemd0 (= 255.4-1ubuntu8), libsz2 (= 1.1.2-1build1), libtasn1-6 (= 4.19.0-3build1), libtinfo6 (= 6.4+20240113-1ubuntu2), libtool (= 2.4.7-7build1), libubsan1 (= 14-20240412-0ubuntu1), libuchardet0 (= 0.0.8-1build1), libudev1 (= 255.4-1ubuntu8), libunistring5 (= 1.1-2build1), libuuid1 (= 2.39.3-9ubuntu6), libx11-6 (= 2:1.8.7-1build1), libx11-data (= 2:1.8.7-1build1), libxau6 (= 1:1.0.9-1build6), libxcb1 (= 1.15-1ubuntu2), libxdmcp6 (= 1:1.1.3-0ubuntu6), libxext6 (= 2:1.3.4-1build2), libxml2 (= 2.9.14+dfsg-1.3ubuntu3), libxml2-dev (= 2.9.14+dfsg-1.3ubuntu3), libxnvctrl0 (= 510.47.03-0ubuntu4), libzstd1 (= 1.5.5+dfsg2-2build1), linux-libc-dev (= 6.8.0-31.31), login (= 1:4.13+dfsg1-4ubuntu3), lto-disabled-list (= 47), m4 (= 1.4.19-4build1), make (= 4.3-4.1build2), man-db (= 2.12.0-4build2), mawk (= 1.3.4.20240123-1build1), media-types (= 10.1.0), mpi-default-dev (= 1.15build1), ncurses-base (= 6.4+20240113-1ubuntu2), ncurses-bin (= 6.4+20240113-1ubuntu2), netbase (= 6.4), ocl-icd-libopencl1 (= 2.3.2-1build1), openmpi-bin (= 4.1.6-7ubuntu2), openmpi-common (= 4.1.6-7ubuntu2), openssh-client (= 1:9.6p1-3ubuntu13), passwd (= 1:4.13+dfsg1-4ubuntu3), patch (= 2.7.6-7build3), perl (= 5.38.2-3.2build2), perl-base (= 5.38.2-3.2build2), perl-modules-5.38 (= 5.38.2-3.2build2), pkgconf (= 1.8.1-2build1), pkgconf-bin (= 1.8.1-2build1), po-debconf (= 1.0.21+nmu1), python3 (= 3.12.3-0ubuntu1), python3-minimal (= 3.12.3-0ubuntu1), python3-packaging (= 24.0-1), python3.12 (= 3.12.3-1), python3.12-minimal (= 3.12.3-1), readline-common (= 8.2-4build1), rpcsvc-proto (= 1.4.2-0ubuntu7), sed (= 4.9-2build1), sensible-utils (= 0.0.22), sysvinit-utils (= 3.08-6ubuntu3), tar (= 1.35+dfsg-3build1), tzdata (= 2024a-2ubuntu1), util-linux (= 2.39.3-9ubuntu6), uuid-dev (= 2.39.3-9ubuntu6), xz-utils (= 5.6.1+really5.4.5-1), zlib1g (= 1:1.3.dfsg-3.1ubuntu2), zlib1g-dev (= 1:1.3.dfsg-3.1ubuntu2) Environment: DEB_BUILD_OPTIONS="noautodbgsym parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1711863711" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ gerris_20131206+dfsg-19.1build2_armhf.deb ----------------------------------------- new Debian package, version 2.0. size 221986 bytes: control archive=2955 bytes. 1390 bytes, 32 lines control 4391 bytes, 69 lines md5sums 88 bytes, 2 lines shlibs 75 bytes, 2 lines triggers Package: gerris Version: 20131206+dfsg-19.1build2 Architecture: armhf Maintainer: Ubuntu Developers Installed-Size: 953 Depends: gcc, libc6 (>= 2.38), libgfortran5 (>= 8), libgfs-1.3-2t64 (>= 20131206+dfsg), libglib2.0-0t64 (>= 2.12.0), libgts-0.7-5t64 (>= 0.7.6), libopenmpi3t64 (>= 4.1.6) Recommends: gfsview Suggests: python3 Breaks: gerris-mpi (<< 20131206+dfsg-7) Replaces: gerris-mpi (<< 20131206+dfsg-7) Section: science Priority: optional Homepage: http://gfs.sourceforge.net/ Description: Fluid Flow Solver Gerris is a system for the solution of the partial differential equations describing fluid flow. . A brief summary of its main (current) features: . * Solves the time-dependent incompressible variable-density Euler, Stokes or Navier-Stokes equations * Adaptive mesh refinement: the resolution is adapted dynamically to the features of the flow * Entirely automatic mesh generation in complex geometries * Second-order in space and time * Unlimited number of advected/diffused passive tracers * Flexible specification of additional source terms * Portable parallel support using the MPI library * Volume of Fluid advection scheme for interfacial flows . This package has MPI support built in. Original-Maintainer: Debian Science Maintainers drwxr-xr-x root/root 0 2024-03-31 05:41 ./ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/bin/ -rwxr-xr-x root/root 3218 2024-03-31 05:41 ./usr/bin/bat2gts -rwxr-xr-x root/root 18200 2024-03-31 05:41 ./usr/bin/gerris2D -rwxr-xr-x root/root 18200 2024-03-31 05:41 ./usr/bin/gerris3D -rwxr-xr-x root/root 1967 2024-03-31 05:41 ./usr/bin/gfs-highlight -rwxr-xr-x root/root 551 2024-03-31 05:41 ./usr/bin/gfs2gfs -rwxr-xr-x root/root 26600 2024-03-31 05:41 ./usr/bin/gfs2oogl2D -rwxr-xr-x root/root 26600 2024-03-31 05:41 ./usr/bin/gfs2oogl3D -rwxr-xr-x root/root 9816 2024-03-31 05:41 ./usr/bin/gfscombine2D -rwxr-xr-x root/root 9816 2024-03-31 05:41 ./usr/bin/gfscombine3D -rwxr-xr-x root/root 18296 2024-03-31 05:41 ./usr/bin/gfscompare2D -rwxr-xr-x root/root 14168 2024-03-31 05:41 ./usr/bin/gfscompare3D -rwxr-xr-x root/root 5034 2024-03-31 05:41 ./usr/bin/gfsjoin -rwxr-xr-x root/root 9832 2024-03-31 05:41 ./usr/bin/gfsjoin2D -rwxr-xr-x root/root 9832 2024-03-31 05:41 ./usr/bin/gfsjoin3D -rwxr-xr-x root/root 1264 2024-03-31 05:41 ./usr/bin/gfsplot -rwxr-xr-x root/root 1732 2024-03-31 05:41 ./usr/bin/gfsxref -rwxr-xr-x root/root 18024 2024-03-31 05:41 ./usr/bin/kdt2kdt -rwxr-xr-x root/root 17960 2024-03-31 05:41 ./usr/bin/kdtquery -rwxr-xr-x root/root 506 2024-03-31 05:41 ./usr/bin/ppm2mpeg -rwxr-xr-x root/root 505 2024-03-31 05:41 ./usr/bin/ppm2theora -rwxr-xr-x root/root 468 2024-03-31 05:41 ./usr/bin/ppm2video -rwxr-xr-x root/root 5720 2024-03-31 05:41 ./usr/bin/ppmcombine -rwxr-xr-x root/root 50792 2024-03-31 05:41 ./usr/bin/rsurface2kdt -rwxr-xr-x root/root 13992 2024-03-31 05:41 ./usr/bin/shapes -rwxr-xr-x root/root 9816 2024-03-31 05:41 ./usr/bin/streamanime -rwxr-xr-x root/root 18024 2024-03-31 05:41 ./usr/bin/xyz2kdt drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/ lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2 -> libstokes2D-1.3.so.2.0.0 -rw-r--r-- root/root 21960 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 -rw-r--r-- root/root 24576 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.a lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.so -> libstokes2D-1.3.so.2.0.0 lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2 -> libstokes3D-1.3.so.2.0.0 -rw-r--r-- root/root 21960 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 -rw-r--r-- root/root 24576 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.a lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.so -> libstokes3D-1.3.so.2.0.0 drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/gerris/ lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/gerris/gfs2tex.py -> ../../share/gerris/gfs2tex.py lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/gerris/m4.awk -> ../../share/gerris/m4.awk drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/doc/gerris/ -rw-r--r-- root/root 930 2013-12-06 15:51 ./usr/share/doc/gerris/AUTHORS -rw-r--r-- root/root 4362 2013-12-06 15:51 ./usr/share/doc/gerris/NEWS.gz -rw-r--r-- root/root 665 2013-12-06 15:51 ./usr/share/doc/gerris/README -rw-r--r-- root/root 277 2013-12-06 15:51 ./usr/share/doc/gerris/THANKS -rw-r--r-- root/root 1405 2013-12-06 15:51 ./usr/share/doc/gerris/TODO lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/share/doc/gerris/changelog.Debian.gz -> ../libgfs-1.3-2t64/changelog.Debian.gz -rw-r--r-- root/root 1933 2020-02-10 09:37 ./usr/share/doc/gerris/copyright drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/gerris/ 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2024-03-31 05:41 ./usr/share/man/man1/gfs-config.1.gz -rw-r--r-- root/root 499 2024-03-31 05:41 ./usr/share/man/man1/gfs-highlight.1.gz -rw-r--r-- root/root 446 2024-03-31 05:41 ./usr/share/man/man1/gfs2gfs.1.gz -rw-r--r-- root/root 1174 2024-03-31 05:41 ./usr/share/man/man1/gfs2oogl2D.1.gz lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/share/man/man1/gfs2oogl3D.1.gz -> gfs2oogl2D.1.gz -rw-r--r-- root/root 1008 2024-03-31 05:41 ./usr/share/man/man1/gfscompare2D.1.gz lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/share/man/man1/gfscompare3D.1.gz -> gfscompare2D.1.gz -rw-r--r-- root/root 383 2024-03-31 05:41 ./usr/share/man/man1/gfsjoin.1.gz -rw-r--r-- root/root 433 2024-03-31 05:41 ./usr/share/man/man1/gfsjoin2D.1.gz -rw-r--r-- root/root 433 2024-03-31 05:41 ./usr/share/man/man1/gfsjoin3D.1.gz -rw-r--r-- root/root 466 2024-03-31 05:41 ./usr/share/man/man1/gfsxref.1.gz lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/share/man/man1/ppm2mpeg.1.gz -> gerris2D.1.gz -rw-r--r-- root/root 488 2024-03-31 05:41 ./usr/share/man/man1/ppmcombine.1.gz -rw-r--r-- root/root 398 2024-03-31 05:41 ./usr/share/man/man1/rsurfaceinfo.1.gz -rw-r--r-- root/root 332 2024-03-31 05:41 ./usr/share/man/man1/rsurfacequery.1.gz -rw-r--r-- root/root 660 2024-03-31 05:41 ./usr/share/man/man1/shapes.1.gz lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/share/man/man1/streamanime.1.gz -> gerris2D.1.gz -rw-r--r-- root/root 554 2024-03-31 05:41 ./usr/share/man/man1/xyz2rsurface.1.gz drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/mime/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/mime/packages/ -rw-r--r-- root/root 1048 2024-03-31 05:41 ./usr/share/mime/packages/gerris.xml libgfs-1.3-2t64_20131206+dfsg-19.1build2_armhf.deb -------------------------------------------------- new Debian package, version 2.0. size 470752 bytes: control archive=938 bytes. 883 bytes, 20 lines control 404 bytes, 5 lines md5sums 100 bytes, 2 lines shlibs 75 bytes, 2 lines triggers Package: libgfs-1.3-2t64 Source: gerris Version: 20131206+dfsg-19.1build2 Architecture: armhf Maintainer: Ubuntu Developers Installed-Size: 1223 Depends: libc6 (>= 2.38), libglib2.0-0t64 (>= 2.75.3), libgts-0.7-5t64 (>= 0.7.6+darcs121130), libopenmpi3t64 (>= 4.1.6) Breaks: libgfs-1.3-2 (<< 20131206+dfsg-19.1build2), libgfs-mpi-1.3-2 (<< 20131206+dfsg-7) Replaces: libgfs-1.3-2, libgfs-mpi-1.3-2 (<< 20131206+dfsg-7) Section: devel Priority: optional Homepage: http://gfs.sourceforge.net/ Description: Fluid Flow Solver -- shared libraries Gerris is a system for the solution of the partial differential equations describing fluid flow. . This package contains the shared libraries for libgfs. . This package has MPI support built in. Original-Maintainer: Debian Science Maintainers drwxr-xr-x root/root 0 2024-03-31 05:41 ./ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2 -> libgfs2D-1.3.so.2.0.0 -rw-r--r-- root/root 565616 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0 lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2 -> libgfs3D-1.3.so.2.0.0 -rw-r--r-- root/root 600312 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0 drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/doc/libgfs-1.3-2t64/ -rw-r--r-- root/root 592 2024-03-31 05:41 ./usr/share/doc/libgfs-1.3-2t64/changelog.Debian.gz -rw-r--r-- root/root 1933 2020-02-10 09:37 ./usr/share/doc/libgfs-1.3-2t64/copyright drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/lintian/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 115 2024-02-28 16:59 ./usr/share/lintian/overrides/libgfs-1.3-2t64 libgfs-dev_20131206+dfsg-19.1build2_armhf.deb --------------------------------------------- new Debian package, version 2.0. size 32056 bytes: control archive=1744 bytes. 837 bytes, 21 lines control 2608 bytes, 41 lines md5sums Package: libgfs-dev Source: gerris Version: 20131206+dfsg-19.1build2 Architecture: armhf Maintainer: Ubuntu Developers Installed-Size: 314 Depends: ffmpeg, libgfs-1.3-2t64 (= 20131206+dfsg-19.1build2), libgts-dev Breaks: libgfs-mpi-dev (<< 20131206+dfsg-7) Replaces: libgfs-mpi-dev (<< 20131206+dfsg-7) Section: libdevel Priority: optional Homepage: http://gfs.sourceforge.net/ Description: Fluid Flow Solver -- development libraries and headers Gerris is a system for the solution of the partial differential equations describing fluid flow. . This package contains the headers and development libraries needed to build applications using libgfs. . This package has MPI support built in. 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root/root 1525 2024-03-31 05:41 ./usr/include/gfs.h drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so -> libgfs2D-1.3.so.2.0.0 lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/libgfs2D.so -> libgfs2D-1.3.so.2.0.0 lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so -> libgfs3D-1.3.so.2.0.0 lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/libgfs3D.so -> libgfs3D-1.3.so.2.0.0 drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 274 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris2D.pc -rw-r--r-- root/root 263 2024-03-31 05:41 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris3D.pc drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-03-31 05:41 ./usr/share/doc/libgfs-dev/ lrwxrwxrwx root/root 0 2024-03-31 05:41 ./usr/share/doc/libgfs-dev/changelog.Debian.gz -> ../libgfs-1.3-2t64/changelog.Debian.gz -rw-r--r-- root/root 1933 2020-02-10 09:37 ./usr/share/doc/libgfs-dev/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: 97580 Build-Time: 271 Distribution: noble Host Architecture: armhf Install-Time: 35 Job: gerris_20131206+dfsg-19.1build2.dsc Machine Architecture: arm64 Package: gerris Package-Time: 308 Source-Version: 20131206+dfsg-19.1build2 Space: 97580 Status: successful Version: 20131206+dfsg-19.1build2 -------------------------------------------------------------------------------- Finished at 2024-05-13T08:09:55Z Build needed 00:05:08, 97580k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28178183 Scanning for processes to kill in build PACKAGEBUILD-28178183