RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'eb83739effc7db2296a477039ce75eb97e3af0d4', '/home/buildd/filecache-default/d25cfce2b3fece95dbe9195395127ff90e07576e'] Synching the system clock with the buildd NTP service... 7 Jul 23:55:56 ntpdate[29789]: adjust time server 10.211.37.1 offset 0.000205 sec Unpacking chroot for build eb83739effc7db2296a477039ce75eb97e3af0d4 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'eb83739effc7db2296a477039ce75eb97e3af0d4'] Mounting chroot for build eb83739effc7db2296a477039ce75eb97e3af0d4 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'eb83739effc7db2296a477039ce75eb97e3af0d4', 'deb http://ftpmaster.internal/ubuntu oneiric main universe'] Overriding sources.list in build-eb83739effc7db2296a477039ce75eb97e3af0d4 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'eb83739effc7db2296a477039ce75eb97e3af0d4', 'armel'] Updating debian chroot for build eb83739effc7db2296a477039ce75eb97e3af0d4 Ign http://ftpmaster.internal oneiric InRelease Get:1 http://ftpmaster.internal oneiric Release.gpg [198 B] Get:2 http://ftpmaster.internal oneiric Release [39.8 kB] Get:3 http://ftpmaster.internal oneiric/main armel Packages [1573 kB] Get:4 http://ftpmaster.internal oneiric/universe armel Packages [6199 kB] Ign http://ftpmaster.internal oneiric/main TranslationIndex Ign http://ftpmaster.internal oneiric/universe TranslationIndex Ign http://ftpmaster.internal oneiric/main Translation-en Ign http://ftpmaster.internal oneiric/universe Translation-en Fetched 7812 kB in 21s (365 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libffi6 libmount1 libpciaccess0 librtmp0 The following packages will be upgraded: apt apt-transport-https base-files bash binutils bsdutils busybox-initramfs ca-certificates cpp-4.6 debconf debconf-i18n dpkg dpkg-dev fakeroot g++-4.6 gcc-4.4-base gcc-4.5-base gcc-4.6 gcc-4.6-base grep hostname initramfs-tools initramfs-tools-bin initscripts insserv klibc-utils libacl1 libattr1 libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcurl3-gnutls libdb4.8 libdb5.1 libdbus-1-3 libdpkg-perl libdrm-intel1 libdrm-nouveau1a libdrm-radeon1 libdrm2 libgcc1 libgcrypt11 libglib2.0-0 libgnutls26 libgomp1 libgpg-error0 libgssapi-krb5-2 libidn11 libk5crypto3 libkeyutils1 libklibc libkrb5-3 libkrb5support0 libldap-2.4-2 libmpfr4 libncurses5 libncursesw5 libnih-dbus1 libnih1 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpng12-0 libreadline6 libselinux1 libsepol1 libstdc++6 libstdc++6-4.6-dev libtasn1-3 libudev0 libuuid1 linux-libc-dev locales login lsb-base make module-init-tools mount mountall multiarch-support ncurses-bin netbase passwd patch perl perl-base perl-modules pkg-create-dbgsym pkgbinarymangler procps python-minimal python2.7-minimal readline-common sed sysv-rc sysvinit-utils udev upstart util-linux 102 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 55.4 MB of archives. After this operation, 2564 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! insserv sysv-rc initscripts upstart libc-dev-bin libgomp1 gcc-4.6-base libstdc++6 libgcc1 g++-4.6 libstdc++6-4.6-dev cpp-4.6 gcc-4.6 make libc6-dev libc-bin libc6 debconf libselinux1 sysvinit-utils dpkg sed ncurses-bin lsb-base passwd libdbus-1-3 libnih-dbus1 libnih1 libmpfr4 linux-libc-dev binutils libudev0 module-init-tools initramfs-tools initramfs-tools-bin klibc-utils libklibc busybox-initramfs libattr1 libacl1 libffi6 libglib2.0-0 libncurses5 libncursesw5 procps libuuid1 libblkid1 util-linux udev mountall libpam0g libpam-modules-bin libpam-modules base-files bash grep hostname login libmount1 mount perl perl-base perl-modules libdb5.1 bsdutils python2.7-minimal python-minimal libdb4.8 libdrm2 libpciaccess0 libdrm-intel1 libdrm-nouveau1a libdrm-radeon1 libpng12-0 libgpg-error0 libgcrypt11 libtasn1-3 libgnutls26 libkeyutils1 libk5crypto3 libgssapi-krb5-2 libkrb5-3 libkrb5support0 libidn11 libldap-2.4-2 librtmp0 ca-certificates libcurl3-gnutls apt readline-common libreadline6 libpam-runtime multiarch-support libsepol1 debconf-i18n netbase locales apt-transport-https dpkg-dev libdpkg-perl patch fakeroot gcc-4.4-base gcc-4.5-base pkg-create-dbgsym pkgbinarymangler Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ oneiric/main insserv armel 1.14.0-2.1 [47.3 kB] Get:2 http://ftpmaster.internal/ubuntu/ oneiric/main sysv-rc all 2.87dsf-4ubuntu25 [37.5 kB] Get:3 http://ftpmaster.internal/ubuntu/ oneiric/main initscripts armel 2.87dsf-4ubuntu25 [31.7 kB] Get:4 http://ftpmaster.internal/ubuntu/ oneiric/main upstart armel 1.3-0ubuntu3 [282 kB] Get:5 http://ftpmaster.internal/ubuntu/ oneiric/main libc-dev-bin armel 2.13-9ubuntu1 [73.0 kB] Get:6 http://ftpmaster.internal/ubuntu/ oneiric/main libgomp1 armel 4.6.1-2ubuntu1 [23.6 kB] Get:7 http://ftpmaster.internal/ubuntu/ oneiric/main gcc-4.6-base armel 4.6.1-2ubuntu1 [14.9 kB] Get:8 http://ftpmaster.internal/ubuntu/ oneiric/main libstdc++6 armel 4.6.1-2ubuntu1 [275 kB] Get:9 http://ftpmaster.internal/ubuntu/ oneiric/main libgcc1 armel 1:4.6.1-2ubuntu1 [22.2 kB] Get:10 http://ftpmaster.internal/ubuntu/ oneiric/main g++-4.6 armel 4.6.1-2ubuntu1 [4896 kB] Get:11 http://ftpmaster.internal/ubuntu/ oneiric/main libstdc++6-4.6-dev armel 4.6.1-2ubuntu1 [1664 kB] Get:12 http://ftpmaster.internal/ubuntu/ oneiric/main cpp-4.6 armel 4.6.1-2ubuntu1 [4035 kB] Get:13 http://ftpmaster.internal/ubuntu/ oneiric/main gcc-4.6 armel 4.6.1-2ubuntu1 [4500 kB] Get:14 http://ftpmaster.internal/ubuntu/ oneiric/main make armel 3.81-8.1ubuntu1 [105 kB] Get:15 http://ftpmaster.internal/ubuntu/ oneiric/main libc6-dev armel 2.13-9ubuntu1 [2295 kB] Get:16 http://ftpmaster.internal/ubuntu/ oneiric/main libc-bin armel 2.13-9ubuntu1 [846 kB] Get:17 http://ftpmaster.internal/ubuntu/ oneiric/main libc6 armel 2.13-9ubuntu1 [3852 kB] Get:18 http://ftpmaster.internal/ubuntu/ oneiric/main debconf all 1.5.40ubuntu1 [145 kB] Get:19 http://ftpmaster.internal/ubuntu/ oneiric/main libselinux1 armel 2.0.98-1.1 [55.0 kB] Get:20 http://ftpmaster.internal/ubuntu/ oneiric/main sysvinit-utils armel 2.87dsf-4ubuntu25 [50.3 kB] Get:21 http://ftpmaster.internal/ubuntu/ oneiric/main dpkg armel 1.16.0.3ubuntu3 [1804 kB] Get:22 http://ftpmaster.internal/ubuntu/ oneiric/main sed armel 4.2.1-9 [134 kB] Get:23 http://ftpmaster.internal/ubuntu/ oneiric/main ncurses-bin armel 5.9-1 [147 kB] Get:24 http://ftpmaster.internal/ubuntu/ oneiric/main lsb-base all 4.0-0ubuntu13 [10.4 kB] Get:25 http://ftpmaster.internal/ubuntu/ oneiric/main passwd armel 1:4.1.4.2+svn3283-3ubuntu2 [797 kB] Get:26 http://ftpmaster.internal/ubuntu/ oneiric/main libdbus-1-3 armel 1.4.12-4ubuntu1 [116 kB] Get:27 http://ftpmaster.internal/ubuntu/ oneiric/main libnih-dbus1 armel 1.0.3-4ubuntu2 [14.0 kB] Get:28 http://ftpmaster.internal/ubuntu/ oneiric/main libnih1 armel 1.0.3-4ubuntu2 [49.0 kB] Get:29 http://ftpmaster.internal/ubuntu/ oneiric/main libmpfr4 armel 3.0.1-4 [169 kB] Get:30 http://ftpmaster.internal/ubuntu/ oneiric/main linux-libc-dev armel 3.0-3.4 [800 kB] Get:31 http://ftpmaster.internal/ubuntu/ oneiric/main binutils armel 2.21.52.20110707-1ubuntu1 [2257 kB] Get:32 http://ftpmaster.internal/ubuntu/ oneiric/main libudev0 armel 171-0ubuntu4 [25.2 kB] Get:33 http://ftpmaster.internal/ubuntu/ oneiric/main module-init-tools armel 3.16-1ubuntu1 [84.1 kB] Get:34 http://ftpmaster.internal/ubuntu/ oneiric/main initramfs-tools all 0.98.8ubuntu4 [52.1 kB] Get:35 http://ftpmaster.internal/ubuntu/ oneiric/main initramfs-tools-bin armel 0.98.8ubuntu4 [11.1 kB] Get:36 http://ftpmaster.internal/ubuntu/ oneiric/main klibc-utils armel 1.5.22-1ubuntu1 [188 kB] Get:37 http://ftpmaster.internal/ubuntu/ oneiric/main libklibc armel 1.5.22-1ubuntu1 [47.1 kB] Get:38 http://ftpmaster.internal/ubuntu/ oneiric/main busybox-initramfs armel 1:1.18.4-2ubuntu1 [154 kB] Get:39 http://ftpmaster.internal/ubuntu/ oneiric/main libattr1 armel 1:2.4.46-1 [9758 B] Get:40 http://ftpmaster.internal/ubuntu/ oneiric/main libacl1 armel 2.2.51-1 [14.7 kB] Get:41 http://ftpmaster.internal/ubuntu/ oneiric/main libffi6 armel 3.0.10~rc8-5 [16.8 kB] Get:42 http://ftpmaster.internal/ubuntu/ oneiric/main libglib2.0-0 armel 2.29.10-0ubuntu1 [982 kB] Get:43 http://ftpmaster.internal/ubuntu/ oneiric/main libncurses5 armel 5.9-1 [162 kB] Get:44 http://ftpmaster.internal/ubuntu/ oneiric/main libncursesw5 armel 5.9-1 [183 kB] Get:45 http://ftpmaster.internal/ubuntu/ oneiric/main procps armel 1:3.2.8-10ubuntu5 [226 kB] Get:46 http://ftpmaster.internal/ubuntu/ oneiric/main libuuid1 armel 2.19.1-2ubuntu2 [13.6 kB] Get:47 http://ftpmaster.internal/ubuntu/ oneiric/main libblkid1 armel 2.19.1-2ubuntu2 [69.2 kB] Get:48 http://ftpmaster.internal/ubuntu/ oneiric/main util-linux armel 2.19.1-2ubuntu2 [543 kB] Get:49 http://ftpmaster.internal/ubuntu/ oneiric/main udev armel 171-0ubuntu4 [283 kB] Get:50 http://ftpmaster.internal/ubuntu/ oneiric/main mountall armel 2.27 [47.5 kB] Get:51 http://ftpmaster.internal/ubuntu/ oneiric/main libpam0g armel 1.1.3-1ubuntu3 [49.1 kB] Get:52 http://ftpmaster.internal/ubuntu/ oneiric/main libpam-modules-bin armel 1.1.3-1ubuntu3 [37.1 kB] Get:53 http://ftpmaster.internal/ubuntu/ oneiric/main libpam-modules armel 1.1.3-1ubuntu3 [243 kB] Get:54 http://ftpmaster.internal/ubuntu/ oneiric/main base-files armel 6.3ubuntu4 [55.8 kB] Get:55 http://ftpmaster.internal/ubuntu/ oneiric/main bash armel 4.2-0ubuntu4 [521 kB] Get:56 http://ftpmaster.internal/ubuntu/ oneiric/main grep armel 2.8-2 [216 kB] Get:57 http://ftpmaster.internal/ubuntu/ oneiric/main hostname armel 3.06ubuntu1 [12.7 kB] Get:58 http://ftpmaster.internal/ubuntu/ oneiric/main login armel 1:4.1.4.2+svn3283-3ubuntu2 [277 kB] Get:59 http://ftpmaster.internal/ubuntu/ oneiric/main libmount1 armel 2.19.1-2ubuntu2 [51.2 kB] Get:60 http://ftpmaster.internal/ubuntu/ oneiric/main mount armel 2.19.1-2ubuntu2 [152 kB] Get:61 http://ftpmaster.internal/ubuntu/ oneiric/main perl armel 5.12.4-1ubuntu2 [3490 kB] Get:62 http://ftpmaster.internal/ubuntu/ oneiric/main perl-base armel 5.12.4-1ubuntu2 [1313 kB] Get:63 http://ftpmaster.internal/ubuntu/ oneiric/main perl-modules all 5.12.4-1ubuntu2 [4711 kB] Get:64 http://ftpmaster.internal/ubuntu/ oneiric/main libdb5.1 armel 5.1.25-11 [598 kB] Get:65 http://ftpmaster.internal/ubuntu/ oneiric/main bsdutils armel 1:2.19.1-2ubuntu2 [32.8 kB] Get:66 http://ftpmaster.internal/ubuntu/ oneiric/main python2.7-minimal armel 2.7.2-2 [1486 kB] Get:67 http://ftpmaster.internal/ubuntu/ oneiric/main python-minimal all 2.7.2-1ubuntu2 [29.6 kB] Get:68 http://ftpmaster.internal/ubuntu/ oneiric/main libdb4.8 armel 4.8.30-9 [581 kB] Get:69 http://ftpmaster.internal/ubuntu/ oneiric/main libdrm2 armel 2.4.26-1ubuntu1 [21.3 kB] Get:70 http://ftpmaster.internal/ubuntu/ oneiric/main libpciaccess0 armel 0.12.1-1 [16.8 kB] Get:71 http://ftpmaster.internal/ubuntu/ oneiric/main libdrm-intel1 armel 2.4.26-1ubuntu1 [21.3 kB] Get:72 http://ftpmaster.internal/ubuntu/ oneiric/main libdrm-nouveau1a armel 2.4.26-1ubuntu1 [11.5 kB] Get:73 http://ftpmaster.internal/ubuntu/ oneiric/main libdrm-radeon1 armel 2.4.26-1ubuntu1 [12.2 kB] Get:74 http://ftpmaster.internal/ubuntu/ oneiric/main libpng12-0 armel 1.2.44-2ubuntu1 [117 kB] Get:75 http://ftpmaster.internal/ubuntu/ oneiric/main libgpg-error0 armel 1.10-0.3ubuntu1 [14.1 kB] Get:76 http://ftpmaster.internal/ubuntu/ oneiric/main libgcrypt11 armel 1.4.6-5ubuntu1 [261 kB] Get:77 http://ftpmaster.internal/ubuntu/ oneiric/main libtasn1-3 armel 2.9-4 [37.7 kB] Get:78 http://ftpmaster.internal/ubuntu/ oneiric/main libgnutls26 armel 2.10.5-1ubuntu2 [378 kB] Get:79 http://ftpmaster.internal/ubuntu/ oneiric/main libkeyutils1 armel 1.4-5 [6054 B] Get:80 http://ftpmaster.internal/ubuntu/ oneiric/main libk5crypto3 armel 1.9.1+dfsg-1ubuntu1 [84.0 kB] Get:81 http://ftpmaster.internal/ubuntu/ oneiric/main libgssapi-krb5-2 armel 1.9.1+dfsg-1ubuntu1 [95.0 kB] Get:82 http://ftpmaster.internal/ubuntu/ oneiric/main libkrb5-3 armel 1.9.1+dfsg-1ubuntu1 [291 kB] Get:83 http://ftpmaster.internal/ubuntu/ oneiric/main libkrb5support0 armel 1.9.1+dfsg-1ubuntu1 [20.0 kB] Get:84 http://ftpmaster.internal/ubuntu/ oneiric/main libidn11 armel 1.22-1ubuntu1 [107 kB] Get:85 http://ftpmaster.internal/ubuntu/ oneiric/main libldap-2.4-2 armel 2.4.25-1ubuntu1 [151 kB] Get:86 http://ftpmaster.internal/ubuntu/ oneiric/main librtmp0 armel 2.3-2 [49.4 kB] Get:87 http://ftpmaster.internal/ubuntu/ oneiric/main ca-certificates all 20110502 [167 kB] Get:88 http://ftpmaster.internal/ubuntu/ oneiric/main libcurl3-gnutls armel 7.21.6-3ubuntu1 [197 kB] Get:89 http://ftpmaster.internal/ubuntu/ oneiric/main apt armel 0.8.15.1ubuntu1 [2003 kB] Get:90 http://ftpmaster.internal/ubuntu/ oneiric/main readline-common all 6.2-2 [49.8 kB] Get:91 http://ftpmaster.internal/ubuntu/ oneiric/main libreadline6 armel 6.2-2 [112 kB] Get:92 http://ftpmaster.internal/ubuntu/ oneiric/main libpam-runtime all 1.1.3-1ubuntu3 [44.6 kB] Get:93 http://ftpmaster.internal/ubuntu/ oneiric/main multiarch-support armel 2.13-9ubuntu1 [4480 B] Get:94 http://ftpmaster.internal/ubuntu/ oneiric/main libsepol1 armel 2.0.42-1 [103 kB] Get:95 http://ftpmaster.internal/ubuntu/ oneiric/main debconf-i18n all 1.5.40ubuntu1 [231 kB] Get:96 http://ftpmaster.internal/ubuntu/ oneiric/main netbase all 4.45ubuntu3 [14.8 kB] Get:97 http://ftpmaster.internal/ubuntu/ oneiric/main locales all 2.13+git20110622-1 [3347 kB] Get:98 http://ftpmaster.internal/ubuntu/ oneiric/main apt-transport-https armel 0.8.15.1ubuntu1 [19.1 kB] Get:99 http://ftpmaster.internal/ubuntu/ oneiric/main dpkg-dev all 1.16.0.3ubuntu3 [474 kB] Get:100 http://ftpmaster.internal/ubuntu/ oneiric/main libdpkg-perl all 1.16.0.3ubuntu3 [172 kB] Get:101 http://ftpmaster.internal/ubuntu/ oneiric/main patch armel 2.6.1-2 [78.0 kB] Get:102 http://ftpmaster.internal/ubuntu/ oneiric/main fakeroot armel 1.16-1 [77.2 kB] Get:103 http://ftpmaster.internal/ubuntu/ oneiric/main gcc-4.4-base armel 4.4.6-3ubuntu1 [14.1 kB] Get:104 http://ftpmaster.internal/ubuntu/ oneiric/main gcc-4.5-base armel 4.5.3-1ubuntu2 [12.3 kB] Get:105 http://ftpmaster.internal/ubuntu/ oneiric/main pkg-create-dbgsym all 0.49 [8300 B] Get:106 http://ftpmaster.internal/ubuntu/ oneiric/main pkgbinarymangler all 101 [26.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 55.4 MB in 7s (7764 kB/s) (Reading database ... 14084 files and directories currently installed.) Preparing to replace insserv 1.14.0-2 (using .../insserv_1.14.0-2.1_armel.deb) ... Unpacking replacement insserv ... Preparing to replace sysv-rc 2.87dsf-4ubuntu23 (using .../sysv-rc_2.87dsf-4ubuntu25_all.deb) ... Unpacking replacement sysv-rc ... Preparing to replace initscripts 2.87dsf-4ubuntu23 (using .../initscripts_2.87dsf-4ubuntu25_armel.deb) ... Unpacking replacement initscripts ... Preparing to replace upstart 0.9.7-1 (using .../upstart_1.3-0ubuntu3_armel.deb) ... Unpacking replacement upstart ... Preparing to replace libc-dev-bin 2.13-0ubuntu15 (using .../libc-dev-bin_2.13-9ubuntu1_armel.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libgomp1 4.6.0-6ubuntu2 (using .../libgomp1_4.6.1-2ubuntu1_armel.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.6-base 4.6.0-6ubuntu2 (using .../gcc-4.6-base_4.6.1-2ubuntu1_armel.deb) ... Unpacking replacement gcc-4.6-base ... Setting up gcc-4.6-base (4.6.1-2ubuntu1) ... (Reading database ... 14083 files and directories currently installed.) Preparing to replace libstdc++6 4.6.0-6ubuntu2 (using .../libstdc++6_4.6.1-2ubuntu1_armel.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.6.1-2ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14083 files and directories currently installed.) Preparing to replace libgcc1 1:4.6.0-6ubuntu2 (using .../libgcc1_1%3a4.6.1-2ubuntu1_armel.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.6.1-2ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14083 files and directories currently installed.) Preparing to replace g++-4.6 4.6.0-6ubuntu2 (using .../g++-4.6_4.6.1-2ubuntu1_armel.deb) ... Unpacking replacement g++-4.6 ... Preparing to replace libstdc++6-4.6-dev 4.6.0-6ubuntu2 (using .../libstdc++6-4.6-dev_4.6.1-2ubuntu1_armel.deb) ... Unpacking replacement libstdc++6-4.6-dev ... Preparing to replace cpp-4.6 4.6.0-6ubuntu2 (using .../cpp-4.6_4.6.1-2ubuntu1_armel.deb) ... Unpacking replacement cpp-4.6 ... Preparing to replace gcc-4.6 4.6.0-6ubuntu2 (using .../gcc-4.6_4.6.1-2ubuntu1_armel.deb) ... Unpacking replacement gcc-4.6 ... Preparing to replace make 3.81-8ubuntu1 (using .../make_3.81-8.1ubuntu1_armel.deb) ... Unpacking replacement make ... Preparing to replace libc6-dev 2.13-0ubuntu15 (using .../libc6-dev_2.13-9ubuntu1_armel.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-bin 2.13-0ubuntu15 (using .../libc-bin_2.13-9ubuntu1_armel.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-9ubuntu1) ... (Reading database ... 14086 files and directories currently installed.) Preparing to replace libc6 2.13-0ubuntu15 (using .../libc6_2.13-9ubuntu1_armel.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.13-9ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14087 files and directories currently installed.) Preparing to replace debconf 1.5.36ubuntu4 (using .../debconf_1.5.40ubuntu1_all.deb) ... Unpacking replacement debconf ... Setting up debconf (1.5.40ubuntu1) ... (Reading database ... 14089 files and directories currently installed.) Preparing to replace libselinux1 2.0.96-1ubuntu2 (using .../libselinux1_2.0.98-1.1_armel.deb) ... Unpacking replacement libselinux1 ... Setting up libselinux1 (2.0.98-1.1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14089 files and directories currently installed.) Preparing to replace sysvinit-utils 2.87dsf-4ubuntu23 (using .../sysvinit-utils_2.87dsf-4ubuntu25_armel.deb) ... Unpacking replacement sysvinit-utils ... Preparing to replace dpkg 1.16.0~ubuntu7 (using .../dpkg_1.16.0.3ubuntu3_armel.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.16.0.3ubuntu3) ... (Reading database ... 14088 files and directories currently installed.) Preparing to replace sed 4.2.1-8 (using .../archives/sed_4.2.1-9_armel.deb) ... Unpacking replacement sed ... Setting up sed (4.2.1-9) ... (Reading database ... 14088 files and directories currently installed.) Preparing to replace ncurses-bin 5.7+20101128-1 (using .../ncurses-bin_5.9-1_armel.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.9-1) ... (Reading database ... 14088 files and directories currently installed.) Preparing to replace lsb-base 4.0-0ubuntu11 (using .../lsb-base_4.0-0ubuntu13_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (4.0-0ubuntu13) ... (Reading database ... 14088 files and directories currently installed.) Preparing to replace passwd 1:4.1.4.2+svn3283-3ubuntu1 (using .../passwd_1%3a4.1.4.2+svn3283-3ubuntu2_armel.deb) ... Unpacking replacement passwd ... Setting up passwd (1:4.1.4.2+svn3283-3ubuntu2) ... (Reading database ... 14088 files and directories currently installed.) Preparing to replace libdbus-1-3 1.4.6-1ubuntu6 (using .../libdbus-1-3_1.4.12-4ubuntu1_armel.deb) ... Unpacking replacement libdbus-1-3 ... Preparing to replace libnih-dbus1 1.0.3-1ubuntu1 (using .../libnih-dbus1_1.0.3-4ubuntu2_armel.deb) ... Unpacking replacement libnih-dbus1 ... Preparing to replace libnih1 1.0.3-1ubuntu1 (using .../libnih1_1.0.3-4ubuntu2_armel.deb) ... Unpacking replacement libnih1 ... Preparing to replace libmpfr4 3.0.1-2 (using .../libmpfr4_3.0.1-4_armel.deb) ... Unpacking replacement libmpfr4 ... Preparing to replace linux-libc-dev 2.6.38-8.42 (using .../linux-libc-dev_3.0-3.4_armel.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace binutils 2.21.51.20110421-0ubuntu5 (using .../binutils_2.21.52.20110707-1ubuntu1_armel.deb) ... Unpacking replacement binutils ... Preparing to replace libudev0 167-0ubuntu3 (using .../libudev0_171-0ubuntu4_armel.deb) ... 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Preparing to replace libattr1 1:2.4.44-2ubuntu3 (using .../libattr1_1%3a2.4.46-1_armel.deb) ... Unpacking replacement libattr1 ... Setting up libattr1 (1:2.4.46-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14114 files and directories currently installed.) Preparing to replace libacl1 2.2.49-4ubuntu2 (using .../libacl1_2.2.51-1_armel.deb) ... Unpacking replacement libacl1 ... Setting up libacl1 (2.2.51-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Selecting previously deselected package libffi6. (Reading database ... 14114 files and directories currently installed.) Unpacking libffi6 (from .../libffi6_3.0.10~rc8-5_armel.deb) ... Preparing to replace libglib2.0-0 2.28.6-0ubuntu1 (using .../libglib2.0-0_2.29.10-0ubuntu1_armel.deb) ... Unpacking replacement libglib2.0-0 ... Preparing to replace libncurses5 5.7+20101128-1 (using .../libncurses5_5.9-1_armel.deb) ... 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Installing new version of config file /etc/bash.bashrc ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode. (Reading database ... 14114 files and directories currently installed.) Preparing to replace grep 2.6.3-3ubuntu1 (using .../archives/grep_2.8-2_armel.deb) ... Unpacking replacement grep ... Setting up grep (2.8-2) ... (Reading database ... 14114 files and directories currently installed.) Preparing to replace hostname 3.05ubuntu1 (using .../hostname_3.06ubuntu1_armel.deb) ... Unpacking replacement hostname ... Setting up hostname (3.06ubuntu1) ... (Reading database ... 14114 files and directories currently installed.) Preparing to replace login 1:4.1.4.2+svn3283-3ubuntu1 (using .../login_1%3a4.1.4.2+svn3283-3ubuntu2_armel.deb) ... Unpacking replacement login ... Setting up login (1:4.1.4.2+svn3283-3ubuntu2) ... Installing new version of config file /etc/login.defs ... 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Preparing to replace dpkg-dev 1.16.0~ubuntu8 (using .../dpkg-dev_1.16.0.3ubuntu3_all.deb) ... Unpacking replacement dpkg-dev ... Preparing to replace libdpkg-perl 1.16.0~ubuntu8 (using .../libdpkg-perl_1.16.0.3ubuntu3_all.deb) ... Unpacking replacement libdpkg-perl ... Preparing to replace patch 2.6-3 (using .../patch_2.6.1-2_armel.deb) ... Unpacking replacement patch ... Preparing to replace fakeroot 1.15.1-1 (using .../fakeroot_1.16-1_armel.deb) ... Unpacking replacement fakeroot ... Preparing to replace gcc-4.4-base 4.4.6-2ubuntu1 (using .../gcc-4.4-base_4.4.6-3ubuntu1_armel.deb) ... Unpacking replacement gcc-4.4-base ... Preparing to replace gcc-4.5-base 4.5.2-11ubuntu2 (using .../gcc-4.5-base_4.5.3-1ubuntu2_armel.deb) ... Unpacking replacement gcc-4.5-base ... Preparing to replace pkg-create-dbgsym 0.48 (using .../pkg-create-dbgsym_0.49_all.deb) ... Unpacking replacement pkg-create-dbgsym ... Preparing to replace pkgbinarymangler 97 (using .../pkgbinarymangler_101_all.deb) ... Unpacking replacement pkgbinarymangler ... Setting up libc-dev-bin (2.13-9ubuntu1) ... Setting up libgomp1 (4.6.1-2ubuntu1) ... Setting up libmpfr4 (3.0.1-4) ... Setting up cpp-4.6 (4.6.1-2ubuntu1) ... Setting up binutils (2.21.52.20110707-1ubuntu1) ... Setting up gcc-4.6 (4.6.1-2ubuntu1) ... Setting up linux-libc-dev (3.0-3.4) ... Setting up libc6-dev (2.13-9ubuntu1) ... Setting up make (3.81-8.1ubuntu1) ... Setting up module-init-tools (3.16-1ubuntu1) ... Setting up initramfs-tools-bin (0.98.8ubuntu4) ... Setting up libklibc (1.5.22-1ubuntu1) ... Setting up klibc-utils (1.5.22-1ubuntu1) ... Setting up busybox-initramfs (1:1.18.4-2ubuntu1) ... Setting up libffi6 (3.0.10~rc8-5) ... Setting up libglib2.0-0 (2.29.10-0ubuntu1) ... Setting up libncursesw5 (5.9-1) ... Setting up procps (1:3.2.8-10ubuntu5) ... Setting up libdb4.8 (4.8.30-9) ... Setting up libdrm2 (2.4.26-1ubuntu1) ... Setting up libpciaccess0 (0.12.1-1) ... Setting up libdrm-intel1 (2.4.26-1ubuntu1) ... Setting up libdrm-nouveau1a (2.4.26-1ubuntu1) ... Setting up libdrm-radeon1 (2.4.26-1ubuntu1) ... Setting up libpng12-0 (1.2.44-2ubuntu1) ... Setting up libgpg-error0 (1.10-0.3ubuntu1) ... Setting up libgcrypt11 (1.4.6-5ubuntu1) ... Setting up libtasn1-3 (2.9-4) ... Setting up libgnutls26 (2.10.5-1ubuntu2) ... Setting up libkeyutils1 (1.4-5) ... Setting up libkrb5support0 (1.9.1+dfsg-1ubuntu1) ... Setting up libk5crypto3 (1.9.1+dfsg-1ubuntu1) ... Setting up libkrb5-3 (1.9.1+dfsg-1ubuntu1) ... Setting up libgssapi-krb5-2 (1.9.1+dfsg-1ubuntu1) ... Setting up libidn11 (1.22-1ubuntu1) ... Setting up libldap-2.4-2 (2.4.25-1ubuntu1) ... Installing new version of config file /etc/ldap/ldap.conf ... Setting up librtmp0 (2.3-2) ... Setting up ca-certificates (20110502) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d....done. Setting up libcurl3-gnutls (7.21.6-3ubuntu1) ... Setting up debconf-i18n (1.5.40ubuntu1) ... Setting up netbase (4.45ubuntu3) ... Installing new version of config file /etc/init.d/networking ... Setting up locales (2.13+git20110622-1) ... Setting up apt-transport-https (0.8.15.1ubuntu1) ... Setting up patch (2.6.1-2) ... Setting up fakeroot (1.16-1) ... Setting up gcc-4.4-base (4.4.6-3ubuntu1) ... Setting up gcc-4.5-base (4.5.3-1ubuntu2) ... Setting up pkg-create-dbgsym (0.49) ... Setting up pkgbinarymangler (101) ... Setting up g++-4.6 (4.6.1-2ubuntu1) ... Setting up udev (171-0ubuntu4) ... Removing 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up initramfs-tools (0.98.8ubuntu4) ... update-initramfs: deferring update (trigger activated) Setting up mountall (2.27) ... Setting up perl-modules (5.12.4-1ubuntu2) ... Setting up perl (5.12.4-1ubuntu2) ... Setting up libdpkg-perl (1.16.0.3ubuntu3) ... Setting up dpkg-dev (1.16.0.3ubuntu3) ... Setting up libstdc++6-4.6-dev (4.6.1-2ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'eb83739effc7db2296a477039ce75eb97e3af0d4', 'armel', 'oneiric', '--nolog', '--batch', '--archive=ubuntu', '--dist=oneiric', '--purpose=PRIMARY', '--architecture=armel', '--comp=universe', 'adun.app_0.81-5.dsc'] Initiating build eb83739effc7db2296a477039ce75eb97e3af0d4 with 0 processor cores. Automatic build of adun.app_0.81-5 on hubbard by sbuild/armel 1.170.5 Build started at 20110708-0001 ****************************************************************************** adun.app_0.81-5.dsc exists in cwd sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8), quilt, libgnustep-gui-dev, libgsl0-dev, imagemagick sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) Checking for already installed source dependencies... debhelper: missing quilt: missing libgnustep-gui-dev: missing libgsl0-dev: missing imagemagick: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper quilt libgnustep-gui-dev libgsl0-dev imagemagick Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autotools-dev bsdmainutils diffstat file fontconfig-config gettext gettext-base gnustep-base-common gnustep-base-runtime gnustep-common gnustep-gui-common gnustep-gui-runtime gnustep-make gobjc gobjc-4.6 groff-base html2text intltool-debian libao-common libao4 libasound2 libaspell15 libavahi-client3 libavahi-common-data libavahi-common3 libcroco3 libcups2 libexpat1 libflac8 libflite1 libfontconfig1 libfreetype6 libgif4 libgnustep-base-dev libgnustep-base1.22 libgnustep-gui0.20 libgsl0ldbl libicu44 libjasper1 libjpeg62 liblcms1 liblqr-1-0 libltdl7 libmagic1 libmagickcore3 libmagickwand3 libobjc3 libogg0 libpipeline1 libpython2.7 libsndfile1 libsqlite3-0 libtiff4 libunistring0 libvorbis0a libvorbisenc2 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxslt1.1 man-db mime-support po-debconf python2.7 sgml-base ttf-dejavu-core ucf xml-core Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc gnustep-base-doc gnustep-make-doc gcc-4.6-doc libobjc3-dbg groff imagemagick-doc autotrace cups-bsd lpr lprng enscript ffmpeg gimp gnuplot grads hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils texlive-base-bin transfig xdg-utils ufraw-batch libaudio2 libesd0 libesd-alsa0 libpulse0 libroar1 libsndio0 roaraudio-server libasound2-plugins aspell cups-common alsa-base libffi-dev libxml2-dev zlib1g-dev libxslt1-dev libgnutls-dev gnustep-gui-doc gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html libjasper-runtime liblcms-utils less www-browser libmail-box-perl python2.7-doc procmail graphviz sgml-base-doc Recommended packages: curl wget lynx-cur libmagickcore3-extra ghostscript netpbm aspell-en aspell-dictionary aspell6a-dictionary gsfonts libmail-sendmail-perl The following NEW packages will be installed: autotools-dev bsdmainutils debhelper diffstat file fontconfig-config gettext gettext-base gnustep-base-common gnustep-base-runtime gnustep-common gnustep-gui-common gnustep-gui-runtime gnustep-make gobjc gobjc-4.6 groff-base html2text imagemagick intltool-debian libao-common libao4 libasound2 libaspell15 libavahi-client3 libavahi-common-data libavahi-common3 libcroco3 libcups2 libexpat1 libflac8 libflite1 libfontconfig1 libfreetype6 libgif4 libgnustep-base-dev libgnustep-base1.22 libgnustep-gui-dev libgnustep-gui0.20 libgsl0-dev libgsl0ldbl libicu44 libjasper1 libjpeg62 liblcms1 liblqr-1-0 libltdl7 libmagic1 libmagickcore3 libmagickwand3 libobjc3 libogg0 libpipeline1 libpython2.7 libsndfile1 libsqlite3-0 libtiff4 libunistring0 libvorbis0a libvorbisenc2 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxslt1.1 man-db mime-support po-debconf python2.7 quilt sgml-base ttf-dejavu-core ucf xml-core 0 upgraded, 77 newly installed, 0 to remove and 0 not upgraded. Need to get 52.7 MB of archives. After this operation, 136 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libsqlite3-0 libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1 libpipeline1 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxext6 libavahi-common-data libavahi-common3 libavahi-client3 libcups2 libobjc3 libjpeg62 libtiff4 libmagic1 file mime-support python2.7 bsdmainutils gettext-base groff-base libxml2 man-db sgml-base xml-core autotools-dev html2text libcroco3 libunistring0 gettext intltool-debian po-debconf debhelper diffstat gnustep-common gnustep-base-common libicu44 libxslt1.1 libgnustep-base1.22 gnustep-base-runtime gnustep-gui-common libao-common libao4 libaspell15 libpython2.7 libasound2 libflite1 libgif4 libgnustep-gui0.20 libogg0 libflac8 libvorbis0a libvorbisenc2 libsndfile1 gnustep-gui-runtime gnustep-make gobjc-4.6 gobjc libjasper1 liblcms1 liblqr-1-0 libltdl7 libmagickcore3 libmagickwand3 imagemagick libgnustep-base-dev libgnustep-gui-dev libgsl0ldbl libgsl0-dev quilt Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ oneiric/main libexpat1 armel 2.0.1-7ubuntu3 [103 kB] Get:2 http://ftpmaster.internal/ubuntu/ oneiric/main libsqlite3-0 armel 3.7.6.3-1ubuntu1 [274 kB] Get:3 http://ftpmaster.internal/ubuntu/ oneiric/main libfreetype6 armel 2.4.4-2 [267 kB] Get:4 http://ftpmaster.internal/ubuntu/ oneiric/main ucf all 3.0025+nmu2ubuntu1 [54.4 kB] Get:5 http://ftpmaster.internal/ubuntu/ oneiric/main ttf-dejavu-core all 2.33-1 [1550 kB] Get:6 http://ftpmaster.internal/ubuntu/ oneiric/main fontconfig-config all 2.8.0-3ubuntu1 [44.2 kB] Get:7 http://ftpmaster.internal/ubuntu/ oneiric/main libfontconfig1 armel 2.8.0-3ubuntu1 [106 kB] Get:8 http://ftpmaster.internal/ubuntu/ oneiric/main libpipeline1 armel 1.2.0-3 [20.6 kB] Get:9 http://ftpmaster.internal/ubuntu/ oneiric/main libxau6 armel 1:1.0.6-3 [7136 B] Get:10 http://ftpmaster.internal/ubuntu/ oneiric/main libxdmcp6 armel 1:1.1.0-3 [11.0 kB] Get:11 http://ftpmaster.internal/ubuntu/ oneiric/main libxcb1 armel 1.7-3 [33.4 kB] Get:12 http://ftpmaster.internal/ubuntu/ oneiric/main libx11-data all 2:1.4.3-2ubuntu1 [168 kB] Get:13 http://ftpmaster.internal/ubuntu/ oneiric/main libx11-6 armel 2:1.4.3-2ubuntu1 [688 kB] Get:14 http://ftpmaster.internal/ubuntu/ oneiric/main libxext6 armel 2:1.3.0-3 [27.9 kB] Get:15 http://ftpmaster.internal/ubuntu/ oneiric/main libavahi-common-data armel 0.6.30-4ubuntu1 [22.4 kB] Get:16 http://ftpmaster.internal/ubuntu/ oneiric/main libavahi-common3 armel 0.6.30-4ubuntu1 [24.1 kB] Get:17 http://ftpmaster.internal/ubuntu/ oneiric/main libavahi-client3 armel 0.6.30-4ubuntu1 [41.2 kB] Get:18 http://ftpmaster.internal/ubuntu/ oneiric/main libcups2 armel 1.4.6-11 [145 kB] Get:19 http://ftpmaster.internal/ubuntu/ oneiric/main libobjc3 armel 4.6.1-2ubuntu1 [141 kB] Get:20 http://ftpmaster.internal/ubuntu/ oneiric/main libjpeg62 armel 6b1-1ubuntu1 [72.2 kB] Get:21 http://ftpmaster.internal/ubuntu/ oneiric/main libtiff4 armel 3.9.5-1ubuntu1 [122 kB] Get:22 http://ftpmaster.internal/ubuntu/ oneiric/main libmagic1 armel 5.04-5ubuntu2 [201 kB] Get:23 http://ftpmaster.internal/ubuntu/ oneiric/main file armel 5.04-5ubuntu2 [22.2 kB] Get:24 http://ftpmaster.internal/ubuntu/ oneiric/main mime-support all 3.51-1ubuntu1 [30.7 kB] Get:25 http://ftpmaster.internal/ubuntu/ oneiric/main python2.7 armel 2.7.2-2 [2510 kB] Get:26 http://ftpmaster.internal/ubuntu/ oneiric/main bsdmainutils armel 8.2.3 [194 kB] Get:27 http://ftpmaster.internal/ubuntu/ oneiric/main gettext-base armel 0.18.1.1-3ubuntu1 [56.1 kB] Get:28 http://ftpmaster.internal/ubuntu/ oneiric/main groff-base armel 1.21-6 [934 kB] Get:29 http://ftpmaster.internal/ubuntu/ oneiric/main libxml2 armel 2.7.8.dfsg-3 [559 kB] Get:30 http://ftpmaster.internal/ubuntu/ oneiric/main man-db armel 2.6.0.2-1 [677 kB] Get:31 http://ftpmaster.internal/ubuntu/ oneiric/main sgml-base all 1.26+nmu1ubuntu1 [8360 B] Get:32 http://ftpmaster.internal/ubuntu/ oneiric/main xml-core all 0.13 [23.4 kB] Get:33 http://ftpmaster.internal/ubuntu/ oneiric/main autotools-dev all 20110511.1 [44.7 kB] Get:34 http://ftpmaster.internal/ubuntu/ oneiric/main html2text armel 1.3.2a-15 [94.3 kB] Get:35 http://ftpmaster.internal/ubuntu/ oneiric/main libcroco3 armel 0.6.2-1 [89.5 kB] Get:36 http://ftpmaster.internal/ubuntu/ oneiric/main libunistring0 armel 0.9.3-4 [394 kB] Get:37 http://ftpmaster.internal/ubuntu/ oneiric/main gettext armel 0.18.1.1-3ubuntu1 [1156 kB] Get:38 http://ftpmaster.internal/ubuntu/ oneiric/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:39 http://ftpmaster.internal/ubuntu/ oneiric/main po-debconf all 1.0.16+nmu1 [212 kB] Get:40 http://ftpmaster.internal/ubuntu/ oneiric/main debhelper all 8.9.0ubuntu1 [487 kB] Get:41 http://ftpmaster.internal/ubuntu/ oneiric/main diffstat armel 1.54-1 [20.5 kB] Get:42 http://ftpmaster.internal/ubuntu/ oneiric/universe gnustep-common armel 2.6.0-1 [49.9 kB] Get:43 http://ftpmaster.internal/ubuntu/ oneiric/universe gnustep-base-common all 1.22.0-1ubuntu1 [66.6 kB] Get:44 http://ftpmaster.internal/ubuntu/ oneiric/main libicu44 armel 4.4.2-2 [6733 kB] Get:45 http://ftpmaster.internal/ubuntu/ oneiric/main libxslt1.1 armel 1.1.26-7 [143 kB] Get:46 http://ftpmaster.internal/ubuntu/ oneiric/universe libgnustep-base1.22 armel 1.22.0-1ubuntu1 [1221 kB] Get:47 http://ftpmaster.internal/ubuntu/ oneiric/universe gnustep-base-runtime armel 1.22.0-1ubuntu1 [218 kB] Get:48 http://ftpmaster.internal/ubuntu/ oneiric/universe gnustep-gui-common all 0.20.0-1ubuntu1 [657 kB] Get:49 http://ftpmaster.internal/ubuntu/ oneiric/main libao-common armel 1.1.0-1ubuntu1 [6784 B] Get:50 http://ftpmaster.internal/ubuntu/ oneiric/main libao4 armel 1.1.0-1ubuntu1 [31.5 kB] Get:51 http://ftpmaster.internal/ubuntu/ oneiric/main libaspell15 armel 0.60.6-6 [559 kB] Get:52 http://ftpmaster.internal/ubuntu/ oneiric/main libpython2.7 armel 2.7.2-2 [1002 kB] Get:53 http://ftpmaster.internal/ubuntu/ oneiric/main libasound2 armel 1.0.24.1-0ubuntu6 [352 kB] Get:54 http://ftpmaster.internal/ubuntu/ oneiric/main libflite1 armel 1.4-release-2 [14.4 MB] Get:55 http://ftpmaster.internal/ubuntu/ oneiric/main libgif4 armel 4.1.6-9 [38.6 kB] Get:56 http://ftpmaster.internal/ubuntu/ oneiric/universe libgnustep-gui0.20 armel 0.20.0-1ubuntu1 [1352 kB] Get:57 http://ftpmaster.internal/ubuntu/ oneiric/main libogg0 armel 1.2.2~dfsg-1 [13.9 kB] Get:58 http://ftpmaster.internal/ubuntu/ oneiric/main libflac8 armel 1.2.1-3 [143 kB] Get:59 http://ftpmaster.internal/ubuntu/ oneiric/main libvorbis0a armel 1.3.2-1ubuntu1 [91.8 kB] Get:60 http://ftpmaster.internal/ubuntu/ oneiric/main libvorbisenc2 armel 1.3.2-1ubuntu1 [115 kB] Get:61 http://ftpmaster.internal/ubuntu/ oneiric/main libsndfile1 armel 1.0.24-1 [158 kB] Get:62 http://ftpmaster.internal/ubuntu/ oneiric/universe gnustep-gui-runtime armel 0.20.0-1ubuntu1 [179 kB] Get:63 http://ftpmaster.internal/ubuntu/ oneiric/universe gnustep-make all 2.6.0-1 [148 kB] Get:64 http://ftpmaster.internal/ubuntu/ oneiric/main gobjc-4.6 armel 4.6.1-2ubuntu1 [4201 kB] Get:65 http://ftpmaster.internal/ubuntu/ oneiric/main gobjc armel 4:4.6.0-3ubuntu1 [876 B] Get:66 http://ftpmaster.internal/ubuntu/ oneiric/main libjasper1 armel 1.900.1-7ubuntu2 [130 kB] Get:67 http://ftpmaster.internal/ubuntu/ oneiric/main liblcms1 armel 1.18.dfsg-1.2ubuntu1 [86.9 kB] Get:68 http://ftpmaster.internal/ubuntu/ oneiric/main liblqr-1-0 armel 0.4.1-1ubuntu2 [30.3 kB] Get:69 http://ftpmaster.internal/ubuntu/ oneiric/main libltdl7 armel 2.4-2ubuntu1 [34.5 kB] Get:70 http://ftpmaster.internal/ubuntu/ oneiric/main libmagickcore3 armel 8:6.6.0.4-3ubuntu1 [1590 kB] Get:71 http://ftpmaster.internal/ubuntu/ oneiric/main libmagickwand3 armel 8:6.6.0.4-3ubuntu1 [350 kB] Get:72 http://ftpmaster.internal/ubuntu/ oneiric/main imagemagick armel 8:6.6.0.4-3ubuntu1 [48.3 kB] Get:73 http://ftpmaster.internal/ubuntu/ oneiric/universe libgnustep-base-dev armel 1.22.0-1ubuntu1 [2147 kB] Get:74 http://ftpmaster.internal/ubuntu/ oneiric/universe libgnustep-gui-dev armel 0.20.0-1ubuntu1 [2493 kB] Get:75 http://ftpmaster.internal/ubuntu/ oneiric/main libgsl0ldbl armel 1.15+dfsg-1 [830 kB] Get:76 http://ftpmaster.internal/ubuntu/ oneiric/main libgsl0-dev armel 1.15+dfsg-1 [1090 kB] Get:77 http://ftpmaster.internal/ubuntu/ oneiric/main quilt all 0.48-7 [319 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 52.7 MB in 11s (4456 kB/s) Selecting previously deselected package libexpat1. 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Setting up libfreetype6 (2.4.4-2) ... Setting up ucf (3.0025+nmu2ubuntu1) ... Setting up ttf-dejavu-core (2.33-1) ... Setting up fontconfig-config (2.8.0-3ubuntu1) ... Setting up libfontconfig1 (2.8.0-3ubuntu1) ... Setting up libpipeline1 (1.2.0-3) ... Setting up libxau6 (1:1.0.6-3) ... Setting up libxdmcp6 (1:1.1.0-3) ... Setting up libxcb1 (1.7-3) ... Setting up libx11-data (2:1.4.3-2ubuntu1) ... Setting up libx11-6 (2:1.4.3-2ubuntu1) ... Setting up libxext6 (2:1.3.0-3) ... Setting up libavahi-common-data (0.6.30-4ubuntu1) ... Setting up libavahi-common3 (0.6.30-4ubuntu1) ... Setting up libavahi-client3 (0.6.30-4ubuntu1) ... Setting up libcups2 (1.4.6-11) ... Setting up libobjc3 (4.6.1-2ubuntu1) ... Setting up libjpeg62 (6b1-1ubuntu1) ... Setting up libtiff4 (3.9.5-1ubuntu1) ... Setting up libmagic1 (5.04-5ubuntu2) ... Setting up file (5.04-5ubuntu2) ... Setting up mime-support (3.51-1ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode. Setting up python2.7 (2.7.2-2) ... Setting up bsdmainutils (8.2.3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up gettext-base (0.18.1.1-3ubuntu1) ... Setting up groff-base (1.21-6) ... Setting up libxml2 (2.7.8.dfsg-3) ... Setting up man-db (2.6.0.2-1) ... Building database of manual pages ... Setting up sgml-base (1.26+nmu1ubuntu1) ... Setting up xml-core (0.13) ... Setting up autotools-dev (20110511.1) ... Setting up html2text (1.3.2a-15) ... Setting up libcroco3 (0.6.2-1) ... Setting up libunistring0 (0.9.3-4) ... Setting up gettext (0.18.1.1-3ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1) ... Setting up debhelper (8.9.0ubuntu1) ... Setting up diffstat (1.54-1) ... Setting up gnustep-common (2.6.0-1) ... Setting up gnustep-base-common (1.22.0-1ubuntu1) ... 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Toolchain package versions: libc6-dev_2.13-9ubuntu1 make_3.81-8.1ubuntu1 dpkg-dev_1.16.0.3ubuntu3 gcc-4.6_4.6.1-2ubuntu1 g++-4.6_4.6.1-2ubuntu1 binutils_2.21.52.20110707-1ubuntu1 libstdc++6_4.6.1-2ubuntu1 libstdc++6-4.6-dev_4.6.1-2ubuntu1 ------------------------------------------------------------------------------ gpgv: Signature made Tue Jun 28 09:04:30 2011 UTC using DSA key ID C09FD35A gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./adun.app_0.81-5.dsc dpkg-source: info: extracting adun.app in adun.app-0.81 dpkg-source: info: unpacking adun.app_0.81.orig.tar.gz dpkg-source: info: applying adun.app_0.81-5.diff.gz dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions dpkg-buildpackage: source package adun.app dpkg-buildpackage: source version 0.81-5 dpkg-source --before-build adun.app-0.81 dpkg-buildpackage: host architecture armel /usr/bin/fakeroot debian/rules clean dh_testdir dh_testroot /usr/bin/make distclean This is gnustep-make 2.6.0. Type 'make print-gnustep-make-help' for help. make[1]: Entering directory `/build/buildd/adun.app-0.81' rm -rf ./*~ ./obj Making clean in Kernel/ ... rm -rf ./*~ ./obj Making clean in Base ... rm -rf ./*~ ./obj Making clean in AdunKernel ... rm -rf ./*~ ./obj Making clean in subprojects of framework AdunKernel... rm -rf ./*~ ./obj rm -rf ./*~ ./obj Making clean in subprojects of subproject CoreAdditions... rm -rf ./*~ ./obj Making clean for framework AdunKernel... rm -rf ./Resources Making clean in MolTalk/ ... rm -rf ./*~ ./obj Making clean for framework MolTalk... Making clean in UL/ ... rm -rf ./*~ ./obj Making clean in XMLLib ... rm -rf ./*~ ./obj Making clean in ULFramework ... rm -rf ./*~ ./obj Making clean for framework ULFramework... Making clean in AdunServer ... rm -rf ./*~ ./obj (cd .; \ rm -rf *.app) Making distclean in Kernel/ ... Making distclean in Base ... make[3]: Nothing to be done for `distclean'. Making distclean in AdunKernel ... Making distclean in subprojects of framework AdunKernel... make[4]: Nothing to be done for `distclean'. Making distclean in subprojects of subproject CoreAdditions... make[5]: Nothing to be done for `distclean'. Making distclean for framework AdunKernel... make[4]: Nothing to be done for `internal-framework-distclean'. Making distclean in MolTalk/ ... Making distclean for framework MolTalk... make[3]: Nothing to be done for `internal-framework-distclean'. Making distclean in UL/ ... Making distclean in XMLLib ... make[3]: Nothing to be done for `distclean'. Making distclean in ULFramework ... Making distclean for framework ULFramework... make[4]: Nothing to be done for `internal-framework-distclean'. Making distclean in AdunServer ... make[3]: Nothing to be done for `distclean'. make[1]: Leaving directory `/build/buildd/adun.app-0.81' dh_clean build-stamp adun.xpm QUILT_PATCHES=debian/patches \ quilt --quiltrc /dev/null pop -a -R || test $? = 2 No patch removed rm -rf .pc debian/stamp-patched debian/rules build QUILT_PATCHES=debian/patches \ quilt --quiltrc /dev/null push -a || test $? = 2 Applying patch 05_no-plugin-script.patch patching file GNUmakefile.postamble Applying patch 15_link-properly.patch patching file Kernel/AdunKernel/GNUmakefile patching file Kernel/GNUmakefile patching file MolTalk/GNUmakefile.preamble patching file UL/AdunServer/GNUmakefile patching file UL/AdunServer/GNUmakefile.preamble patching file UL/GNUmakefile patching file UL/ULFramework/GNUmakefile patching file UL/XMLLib/GNUmakefile.preamble patching file Kernel/Base/GNUmakefile.preamble Applying patch 20_paths.patch patching file UL/AdunServer/main.m patching file UL/ViewController.m Applying patch fix-implicit-pointer.patch patching file Kernel/AdunKernel/Framework/AdunCellListHandler.m Now at patch fix-implicit-pointer.patch touch debian/stamp-patched dh_testdir MAKELEVEL=0 /usr/bin/make GNUSTEP_MAKE_PARALLEL_BUILDING=no \ messages=yes LDFLAGS="-Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app" This is gnustep-make 2.6.0. Type 'make print-gnustep-make-help' for help. Making all in Kernel/ ... make[1]: Entering directory `/build/buildd/adun.app-0.81/Kernel' Making all in Base ... make[2]: Entering directory `/build/buildd/adun.app-0.81/Kernel/Base' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for library libadun_base... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/libadun_base.obj/ gcc AdHarmonicBond.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdHarmonicBond.c.o In file included from ../Base/AdForceFieldFunctions.h:33:0, from AdHarmonicBond.c:30: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdEnzymixBond.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdEnzymixBond.c.o In file included from ../Base/AdForceFieldFunctions.h:33:0, from AdEnzymixBond.c:29: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdEnzymixAngle.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdEnzymixAngle.c.o In file included from ../Base/AdForceFieldFunctions.h:33:0, from AdEnzymixAngle.c:23: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdHarmonicAngle.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdHarmonicAngle.c.o In file included from ../Base/AdForceFieldFunctions.h:33:0, from AdHarmonicAngle.c:23: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdFourierTorsion.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdFourierTorsion.c.o In file included from ../Base/AdForceFieldFunctions.h:33:0, from AdFourierTorsion.c:23: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdFourierTorsion.c: In function 'AdFourierTorsionEnergy': AdFourierTorsion.c:45:17: warning: variable 'n1_n2' set but not used [-Wunused-but-set-variable] AdFourierTorsion.c:45:10: warning: variable 'n2_n1' set but not used [-Wunused-but-set-variable] AdFourierTorsion.c: In function 'AdCalculateTorsionAngle': AdFourierTorsion.c:550:16: warning: variable 'n1_n2' set but not used [-Wunused-but-set-variable] AdFourierTorsion.c:550:9: warning: variable 'n2_n1' set but not used [-Wunused-but-set-variable] gcc AdHarmonicImproperTorsion.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdHarmonicImproperTorsion.c.o In file included from ../Base/AdForceFieldFunctions.h:33:0, from AdHarmonicImproperTorsion.c:25: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdHarmonicImproperTorsion.c: In function 'AdHarmonicImproperTorsionEnergy': AdHarmonicImproperTorsion.c:100:17: warning: variable 'n1_n2' set but not used [-Wunused-but-set-variable] AdHarmonicImproperTorsion.c:100:10: warning: variable 'n2_n1' set but not used [-Wunused-but-set-variable] gcc AdCoulombAndLennardJonesA.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdCoulombAndLennardJonesA.c.o In file included from ../Base/AdForceFieldFunctions.h:33:0, from AdCoulombAndLennardJonesA.c:23: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdCoulombAndLennardJonesA.c: In function 'AdGRFCoulombAndLennardJonesAEnergy': AdCoulombAndLennardJonesA.c:497:10: warning: unused parameter 'b1' [-Wunused-parameter] gcc AdCoulombAndLennardJonesB.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdCoulombAndLennardJonesB.c.o In file included from ../Base/AdForceFieldFunctions.h:33:0, from AdCoulombAndLennardJonesB.c:23: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdCoulombAndLennardJonesB.c: In function 'AdGRFCoulombAndLennardJonesBEnergy': AdCoulombAndLennardJonesB.c:351:10: warning: unused parameter 'b1' [-Wunused-parameter] gcc AdLinkedList.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdLinkedList.c.o In file included from AdLinkedList.c:23:0: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdLinkedList.c:53:76: warning: unused parameter 'index' [-Wunused-parameter] gcc AdMatrix.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdMatrix.c.o AdMatrix.c: In function 'AdSparseMatrixRowLength': AdMatrix.c:638:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc AdGeneralizedBornFunctions.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdGeneralizedBornFunctions.c.o In file included from AdGeneralizedBornFunctions.h:31:0, from AdGeneralizedBornFunctions.c:23: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdGeneralizedBornFunctions.c: In function 'AdGBEBornRadiusDerivative': AdGeneralizedBornFunctions.c:223:33: warning: unused variable 'forceMagnitude' [-Wunused-variable] AdGeneralizedBornFunctions.c: In function 'AdGBEBornRadiusCoefficient': AdGeneralizedBornFunctions.c:262:33: warning: unused variable 'forceMagnitude' [-Wunused-variable] gcc AdQuaternion.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdQuaternion.c.o AdQuaternion.c:24:1: warning: missing braces around initializer [-Wmissing-braces] AdQuaternion.c:24:1: warning: (near initialization for 'x.vector') [-Wmissing-braces] AdQuaternion.c:25:1: warning: missing braces around initializer [-Wmissing-braces] AdQuaternion.c:25:1: warning: (near initialization for 'y.vector') [-Wmissing-braces] AdQuaternion.c:26:1: warning: missing braces around initializer [-Wmissing-braces] AdQuaternion.c:26:1: warning: (near initialization for 'z.vector') [-Wmissing-braces] gcc AdQuadratureFunctions.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdQuadratureFunctions.c.o AdQuadratureFunctions.c: In function 'AdGenerateGaussLegendrePoints': AdQuadratureFunctions.c:93:18: warning: variable 'count' set but not used [-Wunused-but-set-variable] gcc AdSorter.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdSorter.c.o gcc AdVector.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdVector.c.o gcc AdVolumeFunctions.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdVolumeFunctions.c.o In file included from AdVolumeFunctions.h:32:0, from AdVolumeFunctions.c:23: ../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdVolumeFunctions.c: In function 'AdVolumeExclusionFunction': AdVolumeFunctions.c:235:11: warning: variable 'matrix' set but not used [-Wunused-but-set-variable] AdVolumeFunctions.c:234:43: warning: unused variable 'checkVal' [-Wunused-variable] AdVolumeFunctions.c:234:24: warning: unused variable 'smoothingBoundary' [-Wunused-variable] AdVolumeFunctions.c:233:9: warning: unused variable 'j' [-Wunused-variable] AdVolumeFunctions.c: In function 'AdVolumeExclusionFunction2': AdVolumeFunctions.c:310:36: warning: unused variable 'checkVal' [-Wunused-variable] AdVolumeFunctions.c:310:17: warning: unused variable 'smoothingBoundary' [-Wunused-variable] AdVolumeFunctions.c:309:9: warning: unused variable 'j' [-Wunused-variable] AdVolumeFunctions.c: In function 'AdVolumeFunctionAtomDerivative': AdVolumeFunctions.c:430:9: warning: unused variable 'value' [-Wunused-variable] AdVolumeFunctions.c: In function 'AdVolumeFunctionPositionDerivative': AdVolumeFunctions.c:569:9: warning: unused variable 'value' [-Wunused-variable] AdVolumeFunctions.c: In function 'AdAVEFunctionPositionDerivative': AdVolumeFunctions.c:147:1: warning: control reaches end of non-void function [-Wreturn-type] gcc AdBaseFunctions.c -c \ -MMD -MP -DSAFE_ANGLE -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -W -static -O3 -I/usr/local/include -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libadun_base.obj/AdBaseFunctions.c.o gcc -shared -Wl,-soname,libadun_base.so.0 -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -o ./obj/libadun_base.so.0.0.1 obj/libadun_base.obj/AdHarmonicBond.c.o obj/libadun_base.obj/AdEnzymixBond.c.o obj/libadun_base.obj/AdEnzymixAngle.c.o obj/libadun_base.obj/AdHarmonicAngle.c.o obj/libadun_base.obj/AdFourierTorsion.c.o obj/libadun_base.obj/AdHarmonicImproperTorsion.c.o obj/libadun_base.obj/AdCoulombAndLennardJonesA.c.o obj/libadun_base.obj/AdCoulombAndLennardJonesB.c.o obj/libadun_base.obj/AdLinkedList.c.o obj/libadun_base.obj/AdMatrix.c.o obj/libadun_base.obj/AdGeneralizedBornFunctions.c.o obj/libadun_base.obj/AdQuaternion.c.o obj/libadun_base.obj/AdQuadratureFunctions.c.o obj/libadun_base.obj/AdSorter.c.o obj/libadun_base.obj/AdVector.c.o obj/libadun_base.obj/AdVolumeFunctions.c.o obj/libadun_base.obj/AdBaseFunctions.c.o -L/usr/local/lib -L/usr/local/lib -L/usr/lib -lgsl -lm && (cd ./obj; rm -f libadun_base.so; if [ "libadun_base.so.0" != "libadun_base.so.0.0.1" ]; then rm -f libadun_base.so.0; ln -s libadun_base.so.0.0.1 libadun_base.so.0; fi; ln -s libadun_base.so.0 libadun_base.so; ) make[2]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/Base' Making all in AdunKernel ... make[2]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel' Making build-headers in subprojects of framework AdunKernel... make[3]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' Making build-headers for subproject Framework... /usr/share/GNUstep/Makefiles/mkinstalldirs ../AdunKernel.framework/Versions/0/Headers make[3]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' make[3]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making build-headers in subprojects of subproject CoreAdditions... make[4]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making build-headers for subproject CoreCommands... /usr/bin/install -c -p -m 644 AdStatusCommand.h ../../AdunKernel.framework/Versions/0/Headers/AdStatusCommand.h /usr/bin/install -c -p -m 644 AdEndSimulationCommand.h ../../AdunKernel.framework/Versions/0/Headers/AdEndSimulationCommand.h make[4]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making build-headers for subproject CoreAdditions... make[4]: Nothing to be done for `internal-subproject-build-headers'. make[3]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making build-headers for framework AdunKernel... /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdFrameworkFunctions.h AdunKernel.framework/Versions/0/Headers/AdFrameworkFunctions.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunDefinitions.h AdunKernel.framework/Versions/0/Headers/AdunDefinitions.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdDataSources.h AdunKernel.framework/Versions/0/Headers/AdDataSources.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdGridDelegate.h AdunKernel.framework/Versions/0/Headers/AdGridDelegate.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdServerInterface.h AdunKernel.framework/Versions/0/Headers/AdServerInterface.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdIndexSetConversions.h AdunKernel.framework/Versions/0/Headers/AdIndexSetConversions.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdMemento.h AdunKernel.framework/Versions/0/Headers/AdMemento.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdMatrixModification.h AdunKernel.framework/Versions/0/Headers/AdMatrixModification.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunTimer.h AdunKernel.framework/Versions/0/Headers/AdunTimer.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunModelObject.h AdunKernel.framework/Versions/0/Headers/AdunModelObject.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunMatrixStructureCoder.h AdunKernel.framework/Versions/0/Headers/AdunMatrixStructureCoder.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunDataMatrix.h AdunKernel.framework/Versions/0/Headers/AdunDataMatrix.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunDataSet.h AdunKernel.framework/Versions/0/Headers/AdunDataSet.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunDataSource.h AdunKernel.framework/Versions/0/Headers/AdunDataSource.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunContainerDataSource.h AdunKernel.framework/Versions/0/Headers/AdunContainerDataSource.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunElementSelection.h AdunKernel.framework/Versions/0/Headers/AdunElementSelection.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunGrid.h AdunKernel.framework/Versions/0/Headers/AdunGrid.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunSphericalBox.h AdunKernel.framework/Versions/0/Headers/AdunSphericalBox.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunEllipsoidBox.h AdunKernel.framework/Versions/0/Headers/AdunEllipsoidBox.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunCuboidBox.h AdunKernel.framework/Versions/0/Headers/AdunCuboidBox.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunMoleculeCavity.h AdunKernel.framework/Versions/0/Headers/AdunMoleculeCavity.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunCellListHandler.h AdunKernel.framework/Versions/0/Headers/AdunCellListHandler.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunSimpleListHandler.h AdunKernel.framework/Versions/0/Headers/AdunSimpleListHandler.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunLinkedList.h AdunKernel.framework/Versions/0/Headers/AdunLinkedList.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunListHandler.h AdunKernel.framework/Versions/0/Headers/AdunListHandler.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunDynamics.h AdunKernel.framework/Versions/0/Headers/AdunDynamics.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunInteractionSystem.h AdunKernel.framework/Versions/0/Headers/AdunInteractionSystem.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunSystem.h AdunKernel.framework/Versions/0/Headers/AdunSystem.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunSystemCollection.h AdunKernel.framework/Versions/0/Headers/AdunSystemCollection.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdForceFieldTerm.h AdunKernel.framework/Versions/0/Headers/AdForceFieldTerm.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunHarmonicConstraintTerm.h AdunKernel.framework/Versions/0/Headers/AdunHarmonicConstraintTerm.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunSCAAS.h AdunKernel.framework/Versions/0/Headers/AdunSCAAS.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunNonbondedTerm.h AdunKernel.framework/Versions/0/Headers/AdunNonbondedTerm.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunPureNonbondedTerm.h AdunKernel.framework/Versions/0/Headers/AdunPureNonbondedTerm.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunGRFNonbondedTerm.h AdunKernel.framework/Versions/0/Headers/AdunGRFNonbondedTerm.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunShiftedNonbondedTerm.h AdunKernel.framework/Versions/0/Headers/AdunShiftedNonbondedTerm.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunMultithreadedNonbondedTerm.h AdunKernel.framework/Versions/0/Headers/AdunMultithreadedNonbondedTerm.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunSmoothedGBTerm.h AdunKernel.framework/Versions/0/Headers/AdunSmoothedGBTerm.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunForceField.h AdunKernel.framework/Versions/0/Headers/AdunForceField.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunMolecularMechanicsForceField.h AdunKernel.framework/Versions/0/Headers/AdunMolecularMechanicsForceField.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunEnzymixForceField.h AdunKernel.framework/Versions/0/Headers/AdunEnzymixForceField.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunAmberForceField.h AdunKernel.framework/Versions/0/Headers/AdunAmberForceField.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunCharmmForceField.h AdunKernel.framework/Versions/0/Headers/AdunCharmmForceField.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunForceFieldCollection.h AdunKernel.framework/Versions/0/Headers/AdunForceFieldCollection.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunConfigurationGenerator.h AdunKernel.framework/Versions/0/Headers/AdunConfigurationGenerator.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunSimulator.h AdunKernel.framework/Versions/0/Headers/AdunSimulator.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunLangevinThermostat.h AdunKernel.framework/Versions/0/Headers/AdunLangevinThermostat.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunBerendsenThermostat.h AdunKernel.framework/Versions/0/Headers/AdunBerendsenThermostat.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunMinimiser.h AdunKernel.framework/Versions/0/Headers/AdunMinimiser.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunMemoryManager.h AdunKernel.framework/Versions/0/Headers/AdunMemoryManager.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdCoreCommand.h AdunKernel.framework/Versions/0/Headers/AdCoreCommand.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdCoreAdditions.h AdunKernel.framework/Versions/0/Headers/AdCoreAdditions.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdCommandInterface.h AdunKernel.framework/Versions/0/Headers/AdCommandInterface.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdController.h AdunKernel.framework/Versions/0/Headers/AdController.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunIOManager.h AdunKernel.framework/Versions/0/Headers/AdunIOManager.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunSimulationData.h AdunKernel.framework/Versions/0/Headers/AdunSimulationData.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunTrajectory.h AdunKernel.framework/Versions/0/Headers/AdunTrajectory.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunFileSystemSimulationStorage.h AdunKernel.framework/Versions/0/Headers/AdunFileSystemSimulationStorage.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunController.h AdunKernel.framework/Versions/0/Headers/AdunController.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunTemplateProcessor.h AdunKernel.framework/Versions/0/Headers/AdunTemplateProcessor.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunCheckpointManager.h AdunKernel.framework/Versions/0/Headers/AdunCheckpointManager.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunCore.h AdunKernel.framework/Versions/0/Headers/AdunCore.h /usr/bin/install -c -p -m 644 Headers/AdunKernel/AdunKernel.h AdunKernel.framework/Versions/0/Headers/AdunKernel.h /usr/share/GNUstep/Makefiles/mkinstalldirs ./derived_src; \ touch derived_src/.stamp /usr/share/GNUstep/Makefiles/mkinstalldirs AdunKernel.framework/Versions/0/Resources cd ./AdunKernel.framework/Versions; \ rm -f Current; \ ln -s 0 Current cd ./AdunKernel.framework; \ if [ ! -h "Resources" ]; then \ rm -f Resources; \ ln -s Versions/Current/Resources Resources; \ fi; \ if [ ! -h "Headers" ]; then \ rm -f Headers; \ ln -s Versions/Current/Headers Headers; \ fi cd ./derived_src; \ if [ ! -h "AdunKernel" ]; then \ rm -f ./AdunKernel; \ ln -s ../AdunKernel.framework/Headers \ ./AdunKernel; \ fi cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all in subprojects of framework AdunKernel... make[3]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for subproject Framework... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/Framework.obj/ gcc AdFrameworkFunctions.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdFrameworkFunctions.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from AdFrameworkFunctions.m:1: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdIndexSetConversions.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdIndexSetConversions.m.o gcc AdunTimer.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunTimer.m.o gcc AdunModelObject.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunModelObject.m.o AdunModelObject.m: In function '-[AdModelObject addInputReferenceToObjectWithID:name:ofType:inSchema:ofDatabase:]': AdunModelObject.m:232:1: warning: unused parameter 'objectName' [-Wunused-parameter] AdunModelObject.m:232:1: warning: unused parameter 'schema' [-Wunused-parameter] AdunModelObject.m:232:1: warning: unused parameter 'databaseName' [-Wunused-parameter] AdunModelObject.m: In function '-[AdModelObject addOutputReferenceToObjectWithID:name:ofType:inSchema:ofDatabase:]': AdunModelObject.m:324:1: warning: unused parameter 'objectName' [-Wunused-parameter] AdunModelObject.m:324:1: warning: unused parameter 'schema' [-Wunused-parameter] AdunModelObject.m:324:1: warning: unused parameter 'databaseName' [-Wunused-parameter] gcc AdunMatrixStructureCoder.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunMatrixStructureCoder.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from AdunMatrixStructureCoder.m:26: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdunDataMatrix.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunDataMatrix.m.o AdunDataMatrix.m: In function '-[AdDataMatrix _initWithCoderPre0:7:]': AdunDataMatrix.m:1264:6: warning: variable 'matrixElements' set but not used [-Wunused-but-set-variable] AdunDataMatrix.m: In function '-[AdMutableDataMatrix extendMatrixWithColumnValues:]': AdunDataMatrix.m:2145:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc AdunDataSet.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunDataSet.m.o gcc AdunDataSource.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunDataSource.m.o AdunDataSource.m: In function '-[AdDataSource initWithDataSource:]': AdunDataSource.m:239:3: warning: 'AdDataSource' may not respond to '-setNonbondedPairs:' [enabled by default] AdunDataSource.m:239:3: warning: (Messages without a matching method signature [enabled by default] AdunDataSource.m:239:3: warning: will be assumed to return 'id' and accept [enabled by default] AdunDataSource.m:239:3: warning: '...' as arguments.) [enabled by default] AdunDataSource.m: In function '-[AdDataSource elementPairsNotInInteractionsOfCategory:]': AdunDataSource.m:286:1: warning: unused parameter 'aString' [-Wunused-parameter] AdunDataSource.m: In function '-[AdDataSource groupsForInteraction:containingElement:]': AdunDataSource.m:348:1: warning: unused parameter 'interaction' [-Wunused-parameter] AdunDataSource.m:348:1: warning: unused parameter 'elementIndex' [-Wunused-parameter] AdunDataSource.m: In function '-[AdDataSource constraintForInteraction:]': AdunDataSource.m:382:1: warning: unused parameter 'interaction' [-Wunused-parameter] AdunDataSource.m: In function '-[AdDataSource indexSetArrayForCategory:]': AdunDataSource.m:387:1: warning: unused parameter 'category' [-Wunused-parameter] AdunDataSource.m: In function '-[AdMutableDataSource(BiomolecularSystemExtensions) _residueForElement:]': AdunDataSource.m:1256:16: warning: variable 'arrayEnum' set but not used [-Wunused-but-set-variable] gcc AdunContainerDataSource.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunContainerDataSource.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunContainerDataSource.h:32, from AdunContainerDataSource.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunContainerDataSource.m: In function '-[AdContainerDataSource indexSetArrayForCategory:]': AdunContainerDataSource.m:726:1: warning: unused parameter 'category' [-Wunused-parameter] AdunContainerDataSource.m: At top level: AdunContainerDataSource.m:812:1: warning: incomplete implementation of class 'AdContainerDataSource' [enabled by default] AdunContainerDataSource.m:812:1: warning: method definition for '-constraintForInteraction:' not found [enabled by default] AdunContainerDataSource.m:812:1: warning: method definition for '-groupsForInteraction:containingElement:' not found [enabled by default] AdunContainerDataSource.m:812:1: warning: method definition for '-indexesOfElementsWithValues:forProperty:' not found [enabled by default] AdunContainerDataSource.m:812:1: warning: class 'AdContainerDataSource' does not fully implement the 'AdSystemDataSource' protocol [enabled by default] AdunContainerDataSource.m: In function '-[AdContainerDataSource(AdContainerDataSourceInsertionExtensions) insertSystem:]': AdunContainerDataSource.m:870:16: warning: variable 'coordinates' set but not used [-Wunused-but-set-variable] AdunContainerDataSource.m: In function '-[AdContainerDataSource(AdContainerDataSourceInsertionExtensions) removeSystem:]': AdunContainerDataSource.m:922:35: warning: variable 'configuration' set but not used [-Wunused-but-set-variable] gcc AdunElementSelection.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunElementSelection.m.o AdunElementSelection.m: In function '-[AdElementSelection setSelectionString:]': AdunElementSelection.m:173:32: warning: variable 'commaSet' set but not used [-Wunused-but-set-variable] AdunElementSelection.m: In function '-[AdElementSelection _rowsInMatrix:matchingSpecifiers:categoryColumn:subcategoryColumn:restrictToRows:]': AdunElementSelection.m:275:1: warning: unused parameter 'subcategoryColumn' [-Wunused-parameter] AdunElementSelection.m: In function '-[AdElementSelection matchingGroupsInDataSource:]': AdunElementSelection.m:373:11: warning: variable 'groupSpecifiers' set but not used [-Wunused-but-set-variable] gcc AdunGrid.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunGrid.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunCuboidBox.h:26, from AdunGrid.m:26: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunGrid.m: In function '-[AdGrid initWithDensity:cavity:]': AdunGrid.m:216:1: warning: unused parameter 'density' [-Wunused-parameter] AdunGrid.m:216:1: warning: unused parameter 'cavity' [-Wunused-parameter] AdunGrid.m: In function '-[AdGrid initWithDivisions:cavity:]': AdunGrid.m:222:1: warning: unused parameter 'divisions' [-Wunused-parameter] AdunGrid.m:222:1: warning: unused parameter 'cavity' [-Wunused-parameter] gcc AdunSphericalBox.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunSphericalBox.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunSphericalBox.h:5, from AdunSphericalBox.m:1: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdunEllipsoidBox.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunEllipsoidBox.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunEllipsoidBox.h:5, from AdunEllipsoidBox.m:1: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdunCuboidBox.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunCuboidBox.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunCuboidBox.h:26, from AdunCuboidBox.m:23: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdunMoleculeCavity.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunMoleculeCavity.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from AdunMoleculeCavity.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdunCellListHandler.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunCellListHandler.m.o In file included from ../Headers/AdunKernel/AdunCellListHandler.h:34:0, from AdunCellListHandler.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunCellListHandler.m: In function '-[AdCellListHandler _handleSystemContentsChange:]': AdunCellListHandler.m:320:1: warning: unused parameter 'aNotification' [-Wunused-parameter] AdunCellListHandler.m: In function '-[AdCellListHandler createList]': AdunCellListHandler.m:391:17: warning: variable 'cell' set but not used [-Wunused-but-set-variable] gcc AdunSimpleListHandler.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunSimpleListHandler.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSimpleListHandler.h:29, from AdunSimpleListHandler.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunSimpleListHandler.m: In function '-[AdSimpleListHandler _handleSystemContentsChange:]': AdunSimpleListHandler.m:93:1: warning: unused parameter 'aNotification' [-Wunused-parameter] gcc AdunLinkedList.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunLinkedList.m.o In file included from ../Headers/AdunKernel/AdunLinkedList.h:29:0, from AdunLinkedList.m:23: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunLinkedList.m: In function '-[AdLinkedList _reinsertElement:]': AdunLinkedList.m:122:7: warning: variable 'firstElement' set but not used [-Wunused-but-set-variable] gcc AdunListHandler.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunListHandler.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from AdunListHandler.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunListHandler.m: In function '-[AdListHandler initWithSystem:allowedPairs:cutoff:]': AdunListHandler.m:27:1: warning: unused parameter 'aSystem' [-Wunused-parameter] AdunListHandler.m:27:1: warning: unused parameter 'anArray' [-Wunused-parameter] AdunListHandler.m:27:1: warning: unused parameter 'aDouble' [-Wunused-parameter] AdunListHandler.m: In function '-[AdListHandler setCutoff:]': AdunListHandler.m:44:1: warning: unused parameter 'aValue' [-Wunused-parameter] AdunListHandler.m: In function '-[AdListHandler setAllowedPairs:]': AdunListHandler.m:57:1: warning: unused parameter 'anArray' [-Wunused-parameter] AdunListHandler.m: In function '-[AdListHandler setDelegate:]': AdunListHandler.m:84:1: warning: unused parameter 'delegate' [-Wunused-parameter] AdunListHandler.m: In function '-[AdListHandler setSystem:]': AdunListHandler.m:97:1: warning: unused parameter 'aSystem' [-Wunused-parameter] gcc AdunDynamics.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunDynamics.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from AdunDynamics.m:25: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunDynamics.m: In function '-[AdDynamics object:willBeginWritingToMatrix:]': AdunDynamics.m:439:1: warning: unused parameter 'object' [-Wunused-parameter] AdunDynamics.m: In function '-[AdDynamics object:didFinishWritingToMatrix:]': AdunDynamics.m:453:1: warning: unused parameter 'object' [-Wunused-parameter] gcc AdunInteractionSystem.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunInteractionSystem.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunInteractionSystem.h:28, from AdunInteractionSystem.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunInteractionSystem.m: In function '-[AdInteractionSystem indexSetArrayForCategory:]': AdunInteractionSystem.m:495:1: warning: unused parameter 'category' [-Wunused-parameter] gcc AdunSystem.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunSystem.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from AdunSystem.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunSystem.m: In function '-[AdSystem validateMemento:]': AdunSystem.m:313:1: warning: unused parameter 'aMemento' [-Wunused-parameter] gcc AdunSystemCollection.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunSystemCollection.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSystemCollection.h:25, from AdunSystemCollection.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] gcc AdunHarmonicConstraintTerm.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunHarmonicConstraintTerm.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunHarmonicConstraintTerm.h:29, from AdunHarmonicConstraintTerm.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunHarmonicConstraintTerm.m: In function '-[AdHarmonicConstraintTerm initWithSystem:forceConstant:contrainingElementsMatchingSelectionString:]': AdunHarmonicConstraintTerm.m:48:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunHarmonicConstraintTerm.m:45:1: warning: unused parameter 'system' [-Wunused-parameter] AdunHarmonicConstraintTerm.m:45:1: warning: unused parameter 'forceConstant' [-Wunused-parameter] AdunHarmonicConstraintTerm.m:45:1: warning: unused parameter 'selectionString' [-Wunused-parameter] AdunHarmonicConstraintTerm.m: In function '-[AdHarmonicConstraintTerm initWithSystem:forceConstant:container:constraintType:]': AdunHarmonicConstraintTerm.m:132:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunHarmonicConstraintTerm.m: In function '-[AdHarmonicConstraintTerm initWithSystem:forceConstant:constrainingElements:]': AdunHarmonicConstraintTerm.m:141:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunHarmonicConstraintTerm.m: In function '-[AdHarmonicConstraintTerm setExternalForceMatrix:]': AdunHarmonicConstraintTerm.m:232:1: warning: unused parameter 'matrix' [-Wunused-parameter] AdunHarmonicConstraintTerm.m: In function '-[AdHarmonicConstraintTerm setSystem:]': AdunHarmonicConstraintTerm.m:247:1: warning: unused parameter 'system' [-Wunused-parameter] AdunHarmonicConstraintTerm.m: In function '-[AdHarmonicConstraintTerm evaluateForces]': AdunHarmonicConstraintTerm.m:192:68: warning: array subscript is above array bounds [-Warray-bounds] gcc AdunSCAAS.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunSCAAS.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSCAAS.h:37, from AdunSCAAS.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunSCAAS.m: In function '-[AdSCAAS _applyPolarisationConstraint]': AdunSCAAS.m:518:35: warning: variable 'coordinates' set but not used [-Wunused-but-set-variable] AdunSCAAS.m:518:11: warning: variable 'velocities' set but not used [-Wunused-but-set-variable] AdunSCAAS.m: In function '-[AdSCAAS setExternalForceMatrix:]': AdunSCAAS.m:637:1: warning: unused parameter 'matrix' [-Wunused-parameter] gcc AdunNonbondedTerm.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunNonbondedTerm.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunNonbondedTerm.h:28, from AdunNonbondedTerm.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm initWithSystem:]': AdunNonbondedTerm.m:31:1: warning: unused parameter 'system' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm initWithSystem:cutoff:updateInterval:nonbondedPairs:externalForceMatrix:]': AdunNonbondedTerm.m:41:1: warning: unused parameter 'aSystem' [-Wunused-parameter] AdunNonbondedTerm.m:41:1: warning: unused parameter 'aDouble' [-Wunused-parameter] AdunNonbondedTerm.m:41:1: warning: unused parameter 'anInt' [-Wunused-parameter] AdunNonbondedTerm.m:41:1: warning: unused parameter 'nonbondedPairs' [-Wunused-parameter] AdunNonbondedTerm.m:41:1: warning: unused parameter 'matrix' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm handlerDidUpdateList:]': AdunNonbondedTerm.m:82:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm electrostaticEnergy]': AdunNonbondedTerm.m:89:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm lennardJonesEnergy]': AdunNonbondedTerm.m:94:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm energy]': AdunNonbondedTerm.m:99:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm lennardJonesType]': AdunNonbondedTerm.m:104:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm permittivity]': AdunNonbondedTerm.m:109:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm setPermittivity:]': AdunNonbondedTerm.m:112:1: warning: unused parameter 'aDouble' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm cutoff]': AdunNonbondedTerm.m:119:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm setCutoff:]': AdunNonbondedTerm.m:122:1: warning: unused parameter 'aDouble' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm updateInterval]': AdunNonbondedTerm.m:129:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm setUpdateInterval:]': AdunNonbondedTerm.m:132:1: warning: unused parameter 'anInt' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm setExternalForceMatrix:]': AdunNonbondedTerm.m:137:1: warning: unused parameter 'matrix' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm forces]': AdunNonbondedTerm.m:144:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm usesExternalForceMatrix]': AdunNonbondedTerm.m:149:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm setSystem:]': AdunNonbondedTerm.m:152:1: warning: unused parameter 'anObject' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm system]': AdunNonbondedTerm.m:159:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm canEvaluateEnergy]': AdunNonbondedTerm.m:164:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm canEvaluateForces]': AdunNonbondedTerm.m:169:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm setNonbondedPairs:]': AdunNonbondedTerm.m:172:1: warning: unused parameter 'nonbondedPairs' [-Wunused-parameter] AdunNonbondedTerm.m: In function '-[AdNonbondedTerm nonbondedPairs]': AdunNonbondedTerm.m:179:1: warning: no return statement in function returning non-void [-Wreturn-type] gcc AdunPureNonbondedTerm.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunPureNonbondedTerm.m.o In file included from ../../Base/AdForceFieldFunctions.h:33:0, from ../Headers/AdunKernel/AdunPureNonbondedTerm.h:26, from AdunPureNonbondedTerm.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunPureNonbondedTerm.m: In function '-[AdPureNonbondedTerm handlerDidUpdateList:]': AdunPureNonbondedTerm.m:488:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunPureNonbondedTerm.m: In function '-[AdPureNonbondedTerm handlerDidInvalidateList:]': AdunPureNonbondedTerm.m:493:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunPureNonbondedTerm.m: In function '-[AdPureNonbondedTerm handlerDidHandleContentChange:]': AdunPureNonbondedTerm.m:498:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunPureNonbondedTerm.m: In function '-[AdPureNonbondedTerm copyWithZone:]': AdunPureNonbondedTerm.m:812:1: warning: unused parameter 'aZone' [-Wunused-parameter] gcc AdunGRFNonbondedTerm.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunGRFNonbondedTerm.m.o In file included from ../../Base/AdForceFieldFunctions.h:33:0, from ../Headers/AdunKernel/AdunGRFNonbondedTerm.h:26, from AdunGRFNonbondedTerm.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunGRFNonbondedTerm.m: In function '-[AdGRFNonbondedTerm handlerDidUpdateList:]': AdunGRFNonbondedTerm.m:521:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunGRFNonbondedTerm.m: In function '-[AdGRFNonbondedTerm handlerDidInvalidateList:]': AdunGRFNonbondedTerm.m:526:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunGRFNonbondedTerm.m: In function '-[AdGRFNonbondedTerm handlerDidHandleContentChange:]': AdunGRFNonbondedTerm.m:531:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunGRFNonbondedTerm.m: In function '-[AdGRFNonbondedTerm copyWithZone:]': AdunGRFNonbondedTerm.m:848:1: warning: unused parameter 'aZone' [-Wunused-parameter] gcc AdunShiftedNonbondedTerm.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunShiftedNonbondedTerm.m.o In file included from ../../Base/AdForceFieldFunctions.h:33:0, from ../Headers/AdunKernel/AdunShiftedNonbondedTerm.h:26, from AdunShiftedNonbondedTerm.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunShiftedNonbondedTerm.m: In function '-[AdShiftedNonbondedTerm handlerDidUpdateList:]': AdunShiftedNonbondedTerm.m:495:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunShiftedNonbondedTerm.m: In function '-[AdShiftedNonbondedTerm handlerDidInvalidateList:]': AdunShiftedNonbondedTerm.m:500:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunShiftedNonbondedTerm.m: In function '-[AdShiftedNonbondedTerm handlerDidHandleContentChange:]': AdunShiftedNonbondedTerm.m:505:1: warning: unused parameter 'handler' [-Wunused-parameter] AdunShiftedNonbondedTerm.m: In function '-[AdShiftedNonbondedTerm copyWithZone:]': AdunShiftedNonbondedTerm.m:795:1: warning: unused parameter 'aZone' [-Wunused-parameter] gcc AdunMultithreadedNonbondedTerm.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunMultithreadedNonbondedTerm.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunNonbondedTerm.h:28, from ../Headers/AdunKernel/AdunMultithreadedNonbondedTerm.h:24, from AdunMultithreadedNonbondedTerm.m:1: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunMultithreadedNonbondedTerm.m: In function '-[AdMultithreadedNonbondedTerm _dividePairs:]': AdunMultithreadedNonbondedTerm.m:130:7: warning: unused variable 'forward' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m: In function '-[AdMultithreadedNonbondedTerm evaluateForces]': AdunMultithreadedNonbondedTerm.m:295:5: warning: unused variable 'threadedObj' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m:293:15: warning: unused variable 'finishedThreads' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m: In function '-[AdMultithreadedNonbondedTerm updateTerms]': AdunMultithreadedNonbondedTerm.m:327:5: warning: unused variable 'threadedObj' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m:326:12: warning: unused variable 'forces1' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m:325:15: warning: unused variable 'finishedThreads' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m:325:12: warning: unused variable 'k' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m:325:9: warning: unused variable 'j' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m:325:6: warning: unused variable 'i' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m: In function '-[AdNonbondedWorkerThreadManager init]': AdunMultithreadedNonbondedTerm.m:411:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMultithreadedNonbondedTerm.m:406:5: warning: unused variable 'proxy' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m:404:21: warning: unused variable 'receivePort' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m:404:10: warning: unused variable 'sendPort' [-Wunused-variable] AdunMultithreadedNonbondedTerm.m: In function '-[AdWorkerThread initWithThreadManager:]': AdunMultithreadedNonbondedTerm.m:576:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMultithreadedNonbondedTerm.m: In function '-[AdWorkerThread handlePortMessage:]': AdunMultithreadedNonbondedTerm.m:636:1: warning: unused parameter 'portMessage' [-Wunused-parameter] gcc AdunSmoothedGBTerm.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunSmoothedGBTerm.m.o In file included from ../Headers/AdunKernel/AdunSmoothedGBTerm.h:27:0, from AdunSmoothedGBTerm.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunSmoothedGBTerm.m: In function '-[AdSmoothedGBTerm initWithSystem:nonbondedTerm:smoothingLength:solventPermittivity:tensionCoefficient:]': AdunSmoothedGBTerm.m:72:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunSmoothedGBTerm.m:78:25: warning: operation on 'self->totalPairESTPotential' may be undefined [-Wsequence-point] AdunSmoothedGBTerm.m: In function '-[AdSmoothedGBTerm _handleSystemContentsChange:]': AdunSmoothedGBTerm.m:181:1: warning: unused parameter 'aNotification' [-Wunused-parameter] AdunSmoothedGBTerm.m: In function '-[AdSmoothedGBTerm calculateBornRadii]': AdunSmoothedGBTerm.m:243:20: warning: unused variable 'end' [-Wunused-variable] AdunSmoothedGBTerm.m:243:13: warning: unused variable 'start' [-Wunused-variable] AdunSmoothedGBTerm.m: In function '-[AdSmoothedGBTerm(AdForceFieldTermMethods) evaluateForces]': AdunSmoothedGBTerm.m:300:29: warning: unused variable 'separation' [-Wunused-variable] AdunSmoothedGBTerm.m:300:19: warning: unused variable 'valueTwo' [-Wunused-variable] AdunSmoothedGBTerm.m:300:9: warning: unused variable 'valueOne' [-Wunused-variable] AdunSmoothedGBTerm.m:298:15: warning: unused variable 'atomTwo' [-Wunused-variable] AdunSmoothedGBTerm.m:298:6: warning: unused variable 'atomOne' [-Wunused-variable] AdunSmoothedGBTerm.m: In function '-[AdSmoothedGBTerm(AdForceFieldTermMethods) setExternalForceMatrix:]': AdunSmoothedGBTerm.m:415:1: warning: unused parameter 'matrix' [-Wunused-parameter] AdunSmoothedGBTerm.m: In function '-[AdSmoothedGBTerm(AdForceFieldTermMethods) setSystem:]': AdunSmoothedGBTerm.m:425:1: warning: unused parameter 'system' [-Wunused-parameter] gcc AdGBSWTermIntegrationMethods.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdGBSWTermIntegrationMethods.m.o In file included from ../Headers/AdunKernel/AdunSmoothedGBTerm.h:27:0, from AdGBSWTermIntegrationMethods.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdGBSWTermIntegrationMethods.m: In function '-[AdSmoothedGBTerm(LookupTableMethods) _createLookupTable]': AdGBSWTermIntegrationMethods.m:270:18: warning: unused variable 'gridCutSquared' [-Wunused-variable] AdGBSWTermIntegrationMethods.m:267:17: warning: unused variable 'atomIndex' [-Wunused-variable] gcc AdGBSWTermBornRadiiMethods.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdGBSWTermBornRadiiMethods.m.o In file included from ../Headers/AdunKernel/AdunSmoothedGBTerm.h:27:0, from AdGBSWTermBornRadiiMethods.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdGBSWTermBornRadiiMethods.m: In function '-[AdSmoothedGBTerm(BornRadiusMethods) _calculateOptimisedAtomicRadii:]': AdGBSWTermBornRadiiMethods.m:180:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdGBSWTermBornRadiiMethods.m: In function '-[AdSmoothedGBTerm(BornRadiusMethods) _initBornRadiiVariables]': AdGBSWTermBornRadiiMethods.m:216:22: warning: unused variable 'paramsTwo' [-Wunused-variable] AdGBSWTermBornRadiiMethods.m:216:10: warning: unused variable 'paramsOne' [-Wunused-variable] AdGBSWTermBornRadiiMethods.m:215:6: warning: unused variable 'i' [-Wunused-variable] AdGBSWTermBornRadiiMethods.m: In function '-[AdSmoothedGBTerm(BornRadiusDerivative) _calculateDerivativesWithRespectToAtom:]': AdGBSWTermBornRadiiMethods.m:571:42: warning: unused variable 'index' [-Wunused-variable] AdGBSWTermBornRadiiMethods.m: In function 'AdPrivateVEF': AdGBSWTermBornRadiiMethods.m:890:28: warning: unused variable 'checkVal' [-Wunused-variable] AdGBSWTermBornRadiiMethods.m:890:9: warning: unused variable 'smoothingBoundary' [-Wunused-variable] AdGBSWTermBornRadiiMethods.m:889:9: warning: unused variable 'j' [-Wunused-variable] gcc AdunForceField.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunForceField.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunForceField.h:30, from AdunForceField.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField initWithSystem:]': AdunForceField.m:27:1: warning: unused parameter 'system' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField evaluateForcesDueToElements:]': AdunForceField.m:40:1: warning: unused parameter 'elementIndexes' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField forces]': AdunForceField.m:53:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunForceField.m: In function '-[AdForceField totalEnergy]': AdunForceField.m:69:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunForceField.m: In function '-[AdForceField evaluateEnergiesUsingInteractionsInvolvingElements:]': AdunForceField.m:80:1: warning: unused parameter 'elementIndexes' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField system]': AdunForceField.m:93:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunForceField.m: In function '-[AdForceField setSystem:]': AdunForceField.m:96:1: warning: unused parameter 'object' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField arrayOfEnergiesForTerms:notFoundMarker:]': AdunForceField.m:109:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunForceField.m:104:1: warning: unused parameter 'terms' [-Wunused-parameter] AdunForceField.m:104:1: warning: unused parameter 'anObject' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField dictionaryOfEnergiesForTerms:]': AdunForceField.m:117:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunForceField.m:112:1: warning: unused parameter 'array' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField availableTerms]': AdunForceField.m:125:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunForceField.m: In function '-[AdForceField activatedTerms]': AdunForceField.m:133:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunForceField.m: In function '-[AdForceField deactivatedTerms]': AdunForceField.m:141:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunForceField.m: In function '-[AdForceField addCustomTerm:withName:]': AdunForceField.m:144:1: warning: unused parameter 'object' [-Wunused-parameter] AdunForceField.m:144:1: warning: unused parameter 'name' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField addCustomTerms:]': AdunForceField.m:152:1: warning: unused parameter 'aDict' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField removeCustomTermWithName:]': AdunForceField.m:160:1: warning: unused parameter 'name' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField deactivateTerm:]': AdunForceField.m:168:1: warning: unused parameter 'termName' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField deactivateTermsWithNames:]': AdunForceField.m:176:1: warning: unused parameter 'names' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField activateTerm:]': AdunForceField.m:184:1: warning: unused parameter 'termName' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField activateTermsWithNames:]': AdunForceField.m:192:1: warning: unused parameter 'names' [-Wunused-parameter] AdunForceField.m: In function '-[AdForceField accelerations]': AdunForceField.m:205:1: warning: no return statement in function returning non-void [-Wreturn-type] gcc AdunMolecularMechanicsForceField.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunMolecularMechanicsForceField.m.o In file included from ../Headers/AdunKernel/AdunMolecularMechanicsForceField.h:31:0, from AdunMolecularMechanicsForceField.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField initWithSystem:nonbondedTerm:customTerms:]': AdunMolecularMechanicsForceField.m:185:1: warning: unused parameter 'system' [-Wunused-parameter] AdunMolecularMechanicsForceField.m:185:1: warning: unused parameter 'anObject' [-Wunused-parameter] AdunMolecularMechanicsForceField.m:185:1: warning: unused parameter 'aDict' [-Wunused-parameter] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField evaluateForcesDueToElements:]': AdunMolecularMechanicsForceField.m:230:1: warning: unused parameter 'elementIndexes' [-Wunused-parameter] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField evaluateEnergiesUsingInteractionsInvolvingElements:]': AdunMolecularMechanicsForceField.m:242:1: warning: unused parameter 'elementIndexes' [-Wunused-parameter] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField evaluateFiniteDifferenceForcesForTerm:]': AdunMolecularMechanicsForceField.m:249:12: warning: unused variable 'coordinates' [-Wunused-variable] AdunMolecularMechanicsForceField.m:266:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunMolecularMechanicsForceField.m:248:1: warning: unused parameter 'term' [-Wunused-parameter] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField arrayOfEnergiesForTerms:notFoundMarker:]': AdunMolecularMechanicsForceField.m:503:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField allTerms]': AdunMolecularMechanicsForceField.m:544:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField allEnergies]': AdunMolecularMechanicsForceField.m:563:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField description]': AdunMolecularMechanicsForceField.m:692:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMolecularMechanicsForceField.m:710:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMolecularMechanicsForceField.m:715:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMolecularMechanicsForceField.m: In function '-[AdMolecularMechanicsForceField(PrivateInternals) _handleSystemContentsChange:]': AdunMolecularMechanicsForceField.m:944:1: warning: unused parameter 'aNotification' [-Wunused-parameter] gcc AdunEnzymixForceField.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunEnzymixForceField.m.o In file included from ../Headers/AdunKernel/AdunMolecularMechanicsForceField.h:31:0, from ../Headers/AdunKernel/AdunEnzymixForceField.h:27, from AdunEnzymixForceField.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunEnzymixForceField.m: At top level: AdunEnzymixForceField.m:358:1: warning: incomplete implementation of class 'AdEnzymixForceField' [enabled by default] AdunEnzymixForceField.m:358:1: warning: method definition for '-evaluateForcesDueToElements:' not found [enabled by default] gcc AdunAmberForceField.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunAmberForceField.m.o In file included from ../Headers/AdunKernel/AdunMolecularMechanicsForceField.h:31:0, from ../Headers/AdunKernel/AdunAmberForceField.h:25, from AdunAmberForceField.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunAmberForceField.m: At top level: AdunAmberForceField.m:342:1: warning: incomplete implementation of class 'AdAmberForceField' [enabled by default] AdunAmberForceField.m:342:1: warning: method definition for '-evaluateForcesDueToElements:' not found [enabled by default] gcc AdunCharmmForceField.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunCharmmForceField.m.o In file included from ../Headers/AdunKernel/AdunMolecularMechanicsForceField.h:31:0, from ../Headers/AdunKernel/AdunCharmmForceField.h:25, from AdunCharmmForceField.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunCharmmForceField.m: At top level: AdunCharmmForceField.m:546:1: warning: incomplete implementation of class 'AdCharmmForceField' [enabled by default] AdunCharmmForceField.m:546:1: warning: method definition for '-evaluateForcesDueToElements:' not found [enabled by default] gcc AdunForceFieldCollection.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunForceFieldCollection.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunForceField.h:30, from ../Headers/AdunKernel/AdunForceFieldCollection.h:25, from AdunForceFieldCollection.m:1: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunForceFieldCollection.m: In function '-[AdForceFieldCollection forceFieldsForSystems:]': AdunForceFieldCollection.m:151:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunForceFieldCollection.m:147:16: warning: unused variable 'forceField' [-Wunused-variable] gcc AdunConfigurationGenerator.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunConfigurationGenerator.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSystemCollection.h:25, from ../Headers/AdunKernel/AdunConfigurationGenerator.h:28, from AdunConfigurationGenerator.m:1: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunConfigurationGenerator.m: In function '-[AdConfigurationGenerator production:]': AdunConfigurationGenerator.m:128:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunConfigurationGenerator.m:125:1: warning: unused parameter 'error' [-Wunused-parameter] AdunConfigurationGenerator.m: In function '-[AdConfigurationGenerator restartFrom:error:]': AdunConfigurationGenerator.m:134:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunConfigurationGenerator.m:131:1: warning: unused parameter 'step' [-Wunused-parameter] AdunConfigurationGenerator.m:131:1: warning: unused parameter 'error' [-Wunused-parameter] AdunConfigurationGenerator.m: In function '-[AdConfigurationGenerator numberOfSteps]': AdunConfigurationGenerator.m:146:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunConfigurationGenerator.m: In function '-[AdConfigurationGenerator setNumberOfSteps:]': AdunConfigurationGenerator.m:149:1: warning: unused parameter 'aNumber' [-Wunused-parameter] AdunConfigurationGenerator.m: In function '-[AdConfigurationGenerator currentStep]': AdunConfigurationGenerator.m:158:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunConfigurationGenerator.m: In function '-[AdConfigurationGenerator systems]': AdunConfigurationGenerator.m:165:1: warning: no return statement in function returning non-void [-Wreturn-type] AdunConfigurationGenerator.m: In function '-[AdConfigurationGenerator forceFields]': AdunConfigurationGenerator.m:172:1: warning: no return statement in function returning non-void [-Wreturn-type] gcc AdunSimulator.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunSimulator.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSystemCollection.h:25, from ../Headers/AdunKernel/AdunConfigurationGenerator.h:28, from ../Headers/AdunKernel/AdunSimulator.h:26, from AdunSimulator.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunSimulator.m: In function '-[AdSimulator description]': AdunSimulator.m:154:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunSimulator.m: In function '-[AdSimulator _simulateFrom:to:]': AdunSimulator.m:168:12: warning: variable 'name' set but not used [-Wunused-but-set-variable] gcc AdunMinimiser.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunMinimiser.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSystemCollection.h:25, from ../Headers/AdunKernel/AdunConfigurationGenerator.h:28, from ../Headers/AdunKernel/AdunMinimiser.h:27, from AdunMinimiser.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunMinimiser.m: In function '-[AdMinimiser dealloc]': AdunMinimiser.m:210:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunMinimiser.m: In function '-[AdMinimiser production:]': AdunMinimiser.m:227:1: warning: unused parameter 'error' [-Wunused-parameter] AdunMinimiser.m: In function '-[AdMinimiser restartFrom:error:]': AdunMinimiser.m:354:1: warning: unused parameter 'step' [-Wunused-parameter] AdunMinimiser.m:354:1: warning: unused parameter 'error' [-Wunused-parameter] AdunMinimiser.m: In function '-[AdMinimiser setConstraints:forSystem:]': AdunMinimiser.m:499:11: warning: unused variable 'pointer' [-Wunused-variable] AdunMinimiser.m: In function '-[AdMinimiser(GSLWrappers) energyOfConfiguration:usingParameters:]': AdunMinimiser.m:656:1: warning: unused parameter 'params' [-Wunused-parameter] AdunMinimiser.m: In function '-[AdMinimiser(GSLWrappers) energyAndGradientOfConfiguration:usingParameters:energyBuffer:gradientBuffer:]': AdunMinimiser.m:741:9: warning: unused variable 'value' [-Wunused-variable] AdunMinimiser.m:738:1: warning: unused parameter 'params' [-Wunused-parameter] gcc AdunBerendsenThermostat.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunBerendsenThermostat.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSystemCollection.h:25, from ../Headers/AdunKernel/AdunConfigurationGenerator.h:28, from ../Headers/AdunKernel/AdunSimulator.h:26, from ../Headers/AdunKernel/AdunBerendsenThermostat.h:3, from AdunBerendsenThermostat.m:1: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunBerendsenThermostat.m: In function '-[AdBerendsenThermostat _removeTranslationalDOF]': AdunBerendsenThermostat.m:14:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunBerendsenThermostat.m: In function '-[AdBerendsenThermostat simulator:willBeginProductionWithSystems:forceFields:]': AdunBerendsenThermostat.m:136:9: warning: unused variable 'difference' [-Wunused-variable] AdunBerendsenThermostat.m:135:1: warning: unused parameter 'aForceFieldCollection' [-Wunused-parameter] AdunBerendsenThermostat.m: In function '-[AdBerendsenThermostat simulatorWillPerformFirstVelocityUpdateForSystem:]': AdunBerendsenThermostat.m:278:1: warning: unused parameter 'aSystem' [-Wunused-parameter] AdunBerendsenThermostat.m: In function '-[AdBerendsenThermostat simulatorWillPerformPositionUpdateForSystem:]': AdunBerendsenThermostat.m:283:1: warning: unused parameter 'aSystem' [-Wunused-parameter] AdunBerendsenThermostat.m: In function '-[AdBerendsenThermostat simulatorDidPerformPositionUpdateForSystem:]': AdunBerendsenThermostat.m:288:1: warning: unused parameter 'aSystem' [-Wunused-parameter] AdunBerendsenThermostat.m: In function '-[AdBerendsenThermostat simulatorWillPerformSecondVelocityUpdateForSystem:]': AdunBerendsenThermostat.m:293:1: warning: unused parameter 'aSystem' [-Wunused-parameter] AdunBerendsenThermostat.m: In function '-[AdBerendsenThermostat simulatorDidFinishProduction:]': AdunBerendsenThermostat.m:298:1: warning: unused parameter 'aSimulator' [-Wunused-parameter] gcc AdunLangevinThermostat.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunLangevinThermostat.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSystemCollection.h:25, from ../Headers/AdunKernel/AdunConfigurationGenerator.h:28, from ../Headers/AdunKernel/AdunSimulator.h:26, from ../Headers/AdunKernel/AdunLangevinThermostat.h:30, from AdunLangevinThermostat.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunLangevinThermostat.m: In function '-[AdLangevinThermostat _destroySystemForceMatricesAndMassArrays]': AdunLangevinThermostat.m:119:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunLangevinThermostat.m: In function '-[AdLangevinThermostat _removeTranslationalDOF]': AdunLangevinThermostat.m:140:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunLangevinThermostat.m: In function '-[AdLangevinThermostat simulator:willBeginProductionWithSystems:forceFields:]': AdunLangevinThermostat.m:231:1: warning: unused parameter 'aForceFieldCollection' [-Wunused-parameter] AdunLangevinThermostat.m: In function '-[AdLangevinThermostat simulatorDidFinishProduction:]': AdunLangevinThermostat.m:250:1: warning: unused parameter 'aSimulator' [-Wunused-parameter] AdunLangevinThermostat.m: In function '-[AdLangevinThermostat simulatorWillPerformPositionUpdateForSystem:]': AdunLangevinThermostat.m:287:1: warning: unused parameter 'aSystem' [-Wunused-parameter] AdunLangevinThermostat.m: In function '-[AdLangevinThermostat simulatorDidPerformPositionUpdateForSystem:]': AdunLangevinThermostat.m:292:1: warning: unused parameter 'aSystem' [-Wunused-parameter] AdunLangevinThermostat.m: In function '-[AdLangevinThermostat simulatorWillPerformSecondVelocityUpdateForSystem:]': AdunLangevinThermostat.m:297:1: warning: unused parameter 'aSystem' [-Wunused-parameter] gcc AdunMemoryManager.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/Framework.obj/AdunMemoryManager.m.o AdunMemoryManager.m: In function '-[AdMemoryManager freeDoubleMatrix:withRows:]': AdunMemoryManager.m:284:1: warning: unused parameter 'no_rows' [-Wunused-parameter] gcc -nostdlib -r -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -o ./obj/subproject.o obj/Framework.obj/AdFrameworkFunctions.m.o obj/Framework.obj/AdIndexSetConversions.m.o obj/Framework.obj/AdunTimer.m.o obj/Framework.obj/AdunModelObject.m.o obj/Framework.obj/AdunMatrixStructureCoder.m.o obj/Framework.obj/AdunDataMatrix.m.o obj/Framework.obj/AdunDataSet.m.o obj/Framework.obj/AdunDataSource.m.o obj/Framework.obj/AdunContainerDataSource.m.o obj/Framework.obj/AdunElementSelection.m.o obj/Framework.obj/AdunGrid.m.o obj/Framework.obj/AdunSphericalBox.m.o obj/Framework.obj/AdunEllipsoidBox.m.o obj/Framework.obj/AdunCuboidBox.m.o obj/Framework.obj/AdunMoleculeCavity.m.o obj/Framework.obj/AdunCellListHandler.m.o obj/Framework.obj/AdunSimpleListHandler.m.o obj/Framework.obj/AdunLinkedList.m.o obj/Framework.obj/AdunListHandler.m.o obj/Framework.obj/AdunDynamics.m.o obj/Framework.obj/AdunInteractionSystem.m.o obj/Framework.obj/AdunSystem.m.o obj/Framework.obj/AdunSystemCollection.m.o obj/Framework.obj/AdunHarmonicConstraintTerm.m.o obj/Framework.obj/AdunSCAAS.m.o obj/Framework.obj/AdunNonbondedTerm.m.o obj/Framework.obj/AdunPureNonbondedTerm.m.o obj/Framework.obj/AdunGRFNonbondedTerm.m.o obj/Framework.obj/AdunShiftedNonbondedTerm.m.o obj/Framework.obj/AdunMultithreadedNonbondedTerm.m.o obj/Framework.obj/AdunSmoothedGBTerm.m.o obj/Framework.obj/AdGBSWTermIntegrationMethods.m.o obj/Framework.obj/AdGBSWTermBornRadiiMethods.m.o obj/Framework.obj/AdunForceField.m.o obj/Framework.obj/AdunMolecularMechanicsForceField.m.o obj/Framework.obj/AdunEnzymixForceField.m.o obj/Framework.obj/AdunAmberForceField.m.o obj/Framework.obj/AdunCharmmForceField.m.o obj/Framework.obj/AdunForceFieldCollection.m.o obj/Framework.obj/AdunConfigurationGenerator.m.o obj/Framework.obj/AdunSimulator.m.o obj/Framework.obj/AdunMinimiser.m.o obj/Framework.obj/AdunBerendsenThermostat.m.o obj/Framework.obj/AdunLangevinThermostat.m.o obj/Framework.obj/AdunMemoryManager.m.o ; make[3]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' make[3]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all in subprojects of subproject CoreAdditions... make[4]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for subproject CoreCommands... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/CoreCommands.obj/ gcc AdStatusCommand.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../../../ -I../../Headers/ -I../ -I/usr/local/include -I./../../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreCommands.obj/AdStatusCommand.m.o In file included from ../../Headers/AdunKernel/AdunListHandler.h:26:0, from ../../Headers/AdunKernel/AdunSystem.h:29, from ../../Headers/AdunKernel/AdunSystemCollection.h:25, from ../../Headers/AdunKernel/AdunConfigurationGenerator.h:28, from ../../Headers/AdunKernel/AdunCore.h:28, from ../Commands/AdStatusCommand.h:25, from AdStatusCommand.m:22: ../../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdStatusCommand.m: In function '-[AdCore(AdStatusCommand) status:]': AdStatusCommand.m:27:1: warning: unused parameter 'options' [-Wunused-parameter] gcc AdEndSimulationCommand.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../../../ -I../../Headers/ -I../ -I/usr/local/include -I./../../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreCommands.obj/AdEndSimulationCommand.m.o In file included from ../../Headers/AdunKernel/AdunListHandler.h:26:0, from ../../Headers/AdunKernel/AdunSystem.h:29, from ../../Headers/AdunKernel/AdunSystemCollection.h:25, from ../../Headers/AdunKernel/AdunConfigurationGenerator.h:28, from ../../Headers/AdunKernel/AdunCore.h:28, from ../Commands/AdEndSimulationCommand.h:25, from AdEndSimulationCommand.m:23: ../../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdEndSimulationCommand.m: In function '-[AdCore(AdEndSimulationCommand) endSimulation:]': AdEndSimulationCommand.m:28:1: warning: unused parameter 'options' [-Wunused-parameter] gcc -nostdlib -r -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -o ./obj/subproject.o obj/CoreCommands.obj/AdStatusCommand.m.o obj/CoreCommands.obj/AdEndSimulationCommand.m.o ; make[4]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making all for subproject CoreAdditions... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/CoreAdditions.obj/ gcc AdunTemplateProcessor.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreAdditions.obj/AdunTemplateProcessor.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunKernel.h:25, from ../Headers/AdunKernel/AdunTemplateProcessor.h:25, from AdunTemplateProcessor.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunTemplateProcessor.m: In function '-[AdTemplateProcessor validateTemplate:error:]': AdunTemplateProcessor.m:344:54: warning: comparison between pointer and integer [enabled by default] gcc AdunController.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreAdditions.obj/AdunController.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunKernel.h:25, from ../Headers/AdunKernel/AdunController.h:26, from AdunController.m:23: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunController.m: In function '-[AdController runController]': AdunController.m:319:23: warning: unused variable 'dict' [-Wunused-variable] AdunController.m: In function '-[AdController(AdControllerThreadingExtensions) stopSimulation:]': AdunController.m:507:1: warning: unused parameter 'core' [-Wunused-parameter] AdunController.m: In function '-[AdController(AdControllerThreadingExtensions) terminateSimulation:]': AdunController.m:513:1: warning: unused parameter 'core' [-Wunused-parameter] gcc AdunIOManager.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreAdditions.obj/AdunIOManager.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunIOManager.h:32, from AdunIOManager.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunIOManager.m: In function '-[AdIOManager processCommandLine:]': AdunIOManager.m:328:30: warning: variable 'invalidArgs' set but not used [-Wunused-but-set-variable] AdunIOManager.m: In function '-[AdIOManager loadData:]': AdunIOManager.m:699:33: warning: unused variable 'readModeStorage' [-Wunused-variable] AdunIOManager.m:698:27: warning: unused variable 'dataDirectory' [-Wunused-variable] AdunIOManager.m:698:12: warning: unused variable 'templateFile' [-Wunused-variable] AdunIOManager.m: In function '-[AdIOManager closeAllStreams]': AdunIOManager.m:1215:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunIOManager.m: In function '-[AdIOManager(SimulationDataLoading) _loadRestartData:]': AdunIOManager.m:1361:16: warning: unused variable 'systemEnum' [-Wunused-variable] AdunIOManager.m:1358:6: warning: variable 'numberOfFrames' set but not used [-Wunused-but-set-variable] AdunIOManager.m: In function '-[AdIOManager _createLogFilesForNewRun:]': AdunIOManager.m:519:9: warning: ignoring return value of 'freopen', declared with attribute warn_unused_result [-Wunused-result] AdunIOManager.m:520:9: warning: ignoring return value of 'freopen', declared with attribute warn_unused_result [-Wunused-result] AdunIOManager.m: In function '-[AdIOManager _setupLogFilesForContinuationRun:]': AdunIOManager.m:600:9: warning: ignoring return value of 'freopen', declared with attribute warn_unused_result [-Wunused-result] AdunIOManager.m:601:9: warning: ignoring return value of 'freopen', declared with attribute warn_unused_result [-Wunused-result] AdunIOManager.m: In function '-[AdIOManager _createSimulationOutputFiles:]': AdunIOManager.m:867:12: warning: ignoring return value of 'freopen', declared with attribute warn_unused_result [-Wunused-result] AdunIOManager.m:894:12: warning: ignoring return value of 'freopen', declared with attribute warn_unused_result [-Wunused-result] gcc AdunFileSystemSimulationStorage.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreAdditions.obj/AdunFileSystemSimulationStorage.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunFileSystemSimulationStorage.h:25, from AdunFileSystemSimulationStorage.m:1: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunFileSystemSimulationStorage.m: In function '-[AdFileSystemSimulationStorage _loadTrajectoryFrame:]': AdunFileSystemSimulationStorage.m:218:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] AdunFileSystemSimulationStorage.m: In function '-[AdFileSystemSimulationStorage _checkStorage]': AdunFileSystemSimulationStorage.m:283:7: warning: unused variable 'isDirectory' [-Wunused-variable] gcc AdunSimulationData.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreAdditions.obj/AdunSimulationData.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSimulationData.h:31, from AdunSimulationData.m:23: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunSimulationData.m: In function '-[AdSimulationData numberOfFramesForSystem:]': AdunSimulationData.m:482:1: warning: unused parameter 'system' [-Wunused-parameter] AdunSimulationData.m: In function '-[AdSimulationDataWriter initWithDataStorage:systems:forceFields:iterationHeader:]': AdunSimulationData.m:573:22: warning: variable 'storedSystemCollection' set but not used [-Wunused-but-set-variable] AdunSimulationData.m: In function '-[AdSimulationDataWriter _addEnergyCheckpoint]': AdunSimulationData.m:818:4: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunSimulationData.m:826:4: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc AdunTrajectory.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreAdditions.obj/AdunTrajectory.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunTrajectory.h:31, from AdunTrajectory.m:23: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunTrajectory.m: In function '-[AdTrajectory(DataLoadingMethods) setDataStorage:]': AdunTrajectory.m:146:12: warning: unused variable 'dataId' [-Wunused-variable] AdunTrajectory.m:145:9: warning: unused variable 'size' [-Wunused-variable] AdunTrajectory.m: In function '-[AdTrajectory compareCheckpointsForSystem:inTrajectory:toSystem:range:]': AdunTrajectory.m:234:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] AdunTrajectory.m: In function '-[AdMutableTrajectory initWithLocation:systems:forceFields:iterationHeader:error:]': AdunTrajectory.m:587:22: warning: variable 'storedSystemCollection' set but not used [-Wunused-but-set-variable] AdunTrajectory.m:586:16: warning: unused variable 'dataReader' [-Wunused-variable] AdunTrajectory.m:585:33: warning: unused variable 'tempStorage' [-Wunused-variable] AdunTrajectory.m: In function '-[AdMutableTrajectory _addEnergyCheckpoint]': AdunTrajectory.m:860:4: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunTrajectory.m:868:4: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdunTrajectory.m: At top level: AdunTrajectory.m:1268:1: warning: incomplete implementation of class 'AdMutableTrajectory' [enabled by default] AdunTrajectory.m:1268:1: warning: method definition for '-updateSystems' not found [enabled by default] gcc AdunCheckpointManager.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreAdditions.obj/AdunCheckpointManager.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdFrameworkFunctions.h:6, from ../Headers/AdunKernel/AdunFileSystemSimulationStorage.h:25, from ../Headers/AdunKernel/AdunCheckpointManager.h:24, from AdunCheckpointManager.m:22: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunCheckpointManager.m: In function '-[AdCheckpointManager(PrivateInternals) handleProductionStart:]': AdunCheckpointManager.m:398:1: warning: unused parameter 'notification' [-Wunused-parameter] gcc AdunCore.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I../ -I../../ -I../Headers -I/usr/local/include -I./../derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/CoreAdditions.obj/AdunCore.m.o In file included from ../Headers/AdunKernel/AdunListHandler.h:26:0, from ../Headers/AdunKernel/AdunSystem.h:29, from ../Headers/AdunKernel/AdunSystemCollection.h:25, from ../Headers/AdunKernel/AdunConfigurationGenerator.h:28, from ../Headers/AdunKernel/AdunCore.h:28, from AdunCore.m:24: ../../Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ../../Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] AdunCore.m: In function '-[AdCore main:]': AdunCore.m:408:1: warning: unused parameter 'dict' [-Wunused-parameter] AdunCore.m: In function '-[AdCore flushEnergies:]': AdunCore.m:519:1: warning: unused parameter 'aDict' [-Wunused-parameter] AdunCore.m: In function '-[AdCore controllerResults:]': AdunCore.m:525:1: warning: unused parameter 'options' [-Wunused-parameter] AdunCore.m: In function '-[AdCore(AdCoreInteractionModeExtensions) simulationFinished:]': AdunCore.m:647:1: warning: unused parameter 'aNotification' [-Wunused-parameter] gcc -nostdlib -r -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -o ./obj/subproject.o obj/CoreAdditions.obj/AdunTemplateProcessor.m.o obj/CoreAdditions.obj/AdunController.m.o obj/CoreAdditions.obj/AdunIOManager.m.o obj/CoreAdditions.obj/AdunFileSystemSimulationStorage.m.o obj/CoreAdditions.obj/AdunSimulationData.m.o obj/CoreAdditions.obj/AdunTrajectory.m.o obj/CoreAdditions.obj/AdunCheckpointManager.m.o obj/CoreAdditions.obj/AdunCore.m.o Commands/obj/subproject.o ; make[3]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making all for framework AdunKernel... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/AdunKernel.obj/ classes=""; \ for object_file in ./Framework//obj/subproject.o ./CoreAdditions//obj/subproject.o __dummy__; do \ if [ "$object_file" != "__dummy__" ]; then \ sym=`nm -Pg $object_file | sed -n -e '/^__objc_class_name_[A-Za-z0-9_.]* [^U]/ {s/^__objc_class_name_\([A-Za-z0-9_.]*\) [^U].*/\1/p;}'`; \ classes="$classes $sym"; \ fi; \ done; \ classlist=""; \ classarray=""; \ for f in $classes __dummy__ ; do \ if [ "$f" != "__dummy__" ]; then \ if [ "$classlist" = "" ]; then \ classlist="@\"$f\""; \ classarray="(\"$f\""; \ else \ classlist="$classlist, @\"$f\""; \ classarray="$classarray, \"$f\""; \ fi; \ fi; \ done; \ if [ "$classlist" = "" ]; then \ classlist="NULL"; \ classarray="()"; \ else \ classlist="$classlist, NULL"; \ classarray="$classarray)"; \ fi; \ echo "$classarray" > ./derived_src/AdunKernel-class-list; \ echo "#include " > derived_src/NSFramework_AdunKernel.m; \ echo "@interface NSFramework_AdunKernel" >> derived_src/NSFramework_AdunKernel.m; \ echo "+ (NSString *)frameworkEnv;" >> derived_src/NSFramework_AdunKernel.m; \ echo "+ (NSString *)frameworkPath;" >> derived_src/NSFramework_AdunKernel.m; \ echo "+ (NSString *)frameworkVersion;" >> derived_src/NSFramework_AdunKernel.m; \ echo "+ (NSString **)frameworkClasses;" >> derived_src/NSFramework_AdunKernel.m; \ echo "@end" >> derived_src/NSFramework_AdunKernel.m; \ echo "@implementation NSFramework_AdunKernel" >> derived_src/NSFramework_AdunKernel.m; \ echo "+ (NSString *)frameworkEnv { return nil; }" >> derived_src/NSFramework_AdunKernel.m; \ echo "+ (NSString *)frameworkPath { return @\"/home/buildd/GNUstep/Library/Frameworks\"; }" >> derived_src/NSFramework_AdunKernel.m; \ echo "+ (NSString *)frameworkVersion { return @\"0\"; }" >> derived_src/NSFramework_AdunKernel.m; \ echo "static NSString *allClasses[] = {$classlist};" >> derived_src/NSFramework_AdunKernel.m; \ echo "+ (NSString **)frameworkClasses { return allClasses; }" >> derived_src/NSFramework_AdunKernel.m;\ echo "@end" >> derived_src/NSFramework_AdunKernel.m gcc derived_src/NSFramework_AdunKernel.m -c -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -std=gnu89 -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -I/usr/local/include -I/usr/local/include -I./Headers -I. -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep -o obj/AdunKernel.obj/NSFramework_AdunKernel.o \ gcc -shared -Wl,-soname,libAdunKernel.so.0 -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -o ./AdunKernel.framework/Versions/0/./libAdunKernel.so.0.13 obj/AdunKernel.obj/NSFramework_AdunKernel.o Framework//obj/subproject.o CoreAdditions//obj/subproject.o -L/usr/local/lib -L../Base/./obj -L/usr/local/lib -L/usr/local/lib -L/usr/lib -ladun_base -lgsl -lgslcblas -lm -lgnustep-base -lobjc && (cd ./AdunKernel.framework/Versions/0/.; rm -f libAdunKernel.so; if [ "libAdunKernel.so.0" != "libAdunKernel.so.0.13" ]; then rm -f libAdunKernel.so.0; ln -s libAdunKernel.so.0.13 libAdunKernel.so.0; fi; ln -s libAdunKernel.so.0 libAdunKernel.so; ) || rm -f ./AdunKernel.framework/Versions/0/./libAdunKernel.so.0.13 ; \ (cd ./AdunKernel.framework/Versions/0/.; \ rm -f AdunKernel; \ ln -s libAdunKernel.so AdunKernel) \ for f in Resources/ScriptingInfo.plist Resources/GBSWData/; do \ if [ -f $f -o -d $f ]; then \ cp -fr $f ./AdunKernel.framework/Versions/0/Resources/; \ else \ echo "Warning: $f not found - ignoring"; \ fi; \ done for subproject in Framework/ CoreAdditions/; do \ if [ -d $subproject/Resources/Subproject ]; then \ for f in $subproject/Resources/Subproject/*; do \ if [ $f != $subproject'/Resources/Subproject/*' ]; then \ cp -fr $f ./AdunKernel.framework/Versions/0/Resources/; \ fi; \ done; \ fi; \ done (echo "{"; echo ' NOTE = "Automatically generated, do not edit!";'; \ echo " NSExecutable = \"AdunKernel\";"; \ echo " NSMainNibFile = \"\";"; \ echo " NSPrincipalClass = \"AdunKernel\";"; \ echo " Classes = "; \ cat ./derived_src/AdunKernel-class-list; \ echo " ;"; \ echo "}") >AdunKernel.framework/Versions/0/Resources/Info-gnustep.plist if [ -r "AdunKernelInfo.plist" ]; then \ plmerge AdunKernel.framework/Versions/0/Resources/Info-gnustep.plist AdunKernelInfo.plist; \ fi cd ./AdunKernel.framework/.; \ rm -f AdunKernel libAdunKernel.so; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh . \ Versions/Current/./AdunKernel short` \ AdunKernel; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh . \ Versions/Current/./libAdunKernel.so short` \ libAdunKernel.so make[2]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for tool AdunCore... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/AdunCore.obj/ gcc main.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -W -O3 -fconstant-string-class=NSConstantString -std=gnu89 -fconstant-string-class=NSConstantString -IComponents/ -IFramework/ -IAdunKernel/Headers -I/usr/local/include -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/AdunCore.obj/main.m.o In file included from AdunKernel/Headers/AdunKernel/AdunListHandler.h:26:0, from AdunKernel/Headers/AdunKernel/AdunSystem.h:29, from AdunKernel/Headers/AdunKernel/AdFrameworkFunctions.h:6, from AdunKernel/Headers/AdunKernel/AdunKernel.h:25, from AdunKernel/Headers/AdunKernel/AdunController.h:26, from main.m:12: ./Base/AdLinkedList.h: In function 'AdUnsafeLinkedListAdd': ./Base/AdLinkedList.h:70:90: warning: unused parameter 'index' [-Wunused-parameter] main.m: In function 'registerDefaults': main.m:185:33: warning: unused parameter 'error' [-Wunused-parameter] main.m: In function 'main': main.m:222:14: warning: unused variable 'fileName' [-Wunused-variable] main.m:222:5: warning: unused variable 'results' [-Wunused-variable] main.m:213:14: warning: unused parameter 'argc' [-Wunused-parameter] main.m:213:27: warning: unused parameter 'argv' [-Wunused-parameter] gcc -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -fgnu-runtime -o obj/AdunCore \ ./obj/AdunCore.obj/main.m.o \ -L/usr/local/lib -LBase/./obj -LAdunKernel/AdunKernel.framework/Versions/Current -L/opt/intel/lib -L/usr/local/lib -L/usr/lib -lAdunKernel -ladun_base -lgnustep-base -lpthread -lobjc -lm /usr/share/GNUstep/Makefiles/mkinstalldirs Resources/AdunCore make[1]: Leaving directory `/build/buildd/adun.app-0.81/Kernel' Making all in MolTalk/ ... make[1]: Entering directory `/build/buildd/adun.app-0.81/MolTalk' Making build-headers for framework MolTalk... /usr/share/GNUstep/Makefiles/mkinstalldirs MolTalk.framework/Versions/3/Headers /usr/bin/install -c -p -m 644 MolTalk.h MolTalk.framework/Versions/3/Headers/MolTalk.h /usr/bin/install -c -p -m 644 MTAtom.h MolTalk.framework/Versions/3/Headers/MTAtom.h /usr/bin/install -c -p -m 644 MTAlPos.h MolTalk.framework/Versions/3/Headers/MTAlPos.h /usr/bin/install -c -p -m 644 MTChain.h MolTalk.framework/Versions/3/Headers/MTChain.h /usr/bin/install -c -p -m 644 MTCoordinates.h MolTalk.framework/Versions/3/Headers/MTCoordinates.h /usr/bin/install -c -p -m 644 MTResidue.h MolTalk.framework/Versions/3/Headers/MTResidue.h /usr/bin/install -c -p -m 644 MTSelection.h MolTalk.framework/Versions/3/Headers/MTSelection.h /usr/bin/install -c -p -m 644 MTStructure.h MolTalk.framework/Versions/3/Headers/MTStructure.h /usr/bin/install -c -p -m 644 MTString.h MolTalk.framework/Versions/3/Headers/MTString.h /usr/bin/install -c -p -m 644 MTStream.h MolTalk.framework/Versions/3/Headers/MTStream.h /usr/bin/install -c -p -m 644 MTFileStream.h MolTalk.framework/Versions/3/Headers/MTFileStream.h /usr/bin/install -c -p -m 644 MTCompressedFileStream.h MolTalk.framework/Versions/3/Headers/MTCompressedFileStream.h /usr/bin/install -c -p -m 644 MTMatrix53.h MolTalk.framework/Versions/3/Headers/MTMatrix53.h /usr/bin/install -c -p -m 644 MTMatrix44.h MolTalk.framework/Versions/3/Headers/MTMatrix44.h /usr/bin/install -c -p -m 644 MTMatrix.h MolTalk.framework/Versions/3/Headers/MTMatrix.h /usr/bin/install -c -p -m 644 MTVector.h MolTalk.framework/Versions/3/Headers/MTVector.h /usr/bin/install -c -p -m 644 MTPairwiseStrxAlignment.h MolTalk.framework/Versions/3/Headers/MTPairwiseStrxAlignment.h /usr/bin/install -c -p -m 644 MTPairwiseSequenceAlignment.h MolTalk.framework/Versions/3/Headers/MTPairwiseSequenceAlignment.h /usr/bin/install -c -p -m 644 MTSubstitutionMatrix.h MolTalk.framework/Versions/3/Headers/MTSubstitutionMatrix.h /usr/bin/install -c -p -m 644 MTStructureFactory.h MolTalk.framework/Versions/3/Headers/MTStructureFactory.h /usr/bin/install -c -p -m 644 MTChainFactory.h MolTalk.framework/Versions/3/Headers/MTChainFactory.h /usr/bin/install -c -p -m 644 MTResidueFactory.h MolTalk.framework/Versions/3/Headers/MTResidueFactory.h /usr/bin/install -c -p -m 644 MTAtomFactory.h MolTalk.framework/Versions/3/Headers/MTAtomFactory.h /usr/bin/install -c -p -m 644 MTQuaternion.h MolTalk.framework/Versions/3/Headers/MTQuaternion.h /usr/share/GNUstep/Makefiles/mkinstalldirs ./derived_src; \ touch derived_src/.stamp /usr/share/GNUstep/Makefiles/mkinstalldirs MolTalk.framework/Versions/3/Resources cd ./MolTalk.framework/Versions; \ rm -f Current; \ ln -s 3 Current cd ./MolTalk.framework; \ if [ ! -h "Resources" ]; then \ rm -f Resources; \ ln -s Versions/Current/Resources Resources; \ fi; \ if [ ! -h "Headers" ]; then \ rm -f Headers; \ ln -s Versions/Current/Headers Headers; \ fi cd ./derived_src; \ if [ ! -h "MolTalk" ]; then \ rm -f ./MolTalk; \ ln -s ../MolTalk.framework/Headers \ ./MolTalk; \ fi cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for framework MolTalk... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/MolTalk.obj/ gcc MolTalk.c -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -D_REENTRANT -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -D none -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MolTalk.c.o gcc MTAtom.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTAtom.m.o gcc MTAlPos.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTAlPos.m.o gcc MTChain.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTChain.m.o MTChain.m: In function '-[MTChain removeResidue:]': MTChain.m:488:12: warning: unused variable 'p_num' [-Wunused-variable] MTChain.m: In function '-[MTChain selectResiduesCloseTo:maxDistance:]': MTChain.m:633:15: warning: variable 'seq2' set but not used [-Wunused-but-set-variable] MTChain.m:633:8: warning: variable 'seq1' set but not used [-Wunused-but-set-variable] MTChain.m: In function '-[MTChain deepCopy]': MTChain.m:922:13: warning: unused variable 'prevres' [-Wunused-variable] MTChain.m: In function '-[MTChain deepCopyCA]': MTChain.m:997:13: warning: unused variable 'prevres' [-Wunused-variable] MTChain.m: In function '-[MTChain selectResiduesCloseTo:maxDistance:]': MTChain.m:727:10: warning: 'z1' may be used uninitialized in this function [-Wuninitialized] MTChain.m:725:10: warning: 'y1' may be used uninitialized in this function [-Wuninitialized] MTChain.m:723:10: warning: 'x1' may be used uninitialized in this function [-Wuninitialized] gcc privateMTChain.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/privateMTChain.m.o gcc MTCoordinates.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTCoordinates.m.o gcc MTResidue.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTResidue.m.o MTResidue.m: In function '-[MTResidue compare:]': MTResidue.m:156:1: warning: control reaches end of non-void function [-Wreturn-type] gcc privateMTResidue.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/privateMTResidue.m.o gcc MTSelection.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTSelection.m.o gcc privateMTSelection.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/privateMTSelection.m.o gcc MTStructure.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTStructure.m.o MTStructure.m: In function '-[MTStructure writePDBToStream:asModel:]': MTStructure.m:447:2: warning: unused variable 'poolinner' [-Wunused-variable] gcc privateMTStructure.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/privateMTStructure.m.o privateMTStructure.m: In function '-[MTStructure(Private) writePDBHeaderTo:]': privateMTStructure.m:230:33: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:230:33: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m: In function '-[MTStructure(Private) writePDBConectResidue:to:]': privateMTStructure.m:414:33: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:417:25: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:417:25: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m: In function '-[MTStructure(Private) writePDBChain:to:fromSerial:]': privateMTStructure.m:470:17: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:470:17: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:472:17: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:472:17: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m: In function '-[MTStructure(Private) writePDBResidue:inChain:to:fromSerial:]': privateMTStructure.m:534:9: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:534:9: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:549:17: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:549:17: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m: In function '-[MTStructure(Private) writePDBHeterogen:inChain:to:fromSerial:]': privateMTStructure.m:635:9: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:635:9: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:650:17: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m:650:17: warning: ' ' flag used with '%u' gnu_printf format [-Wformat] privateMTStructure.m: In function '-[MTStructure(Private) backTransformation]': privateMTStructure.m:803:16: warning: unused variable 'tSINB' [-Wunused-variable] privateMTStructure.m:802:16: warning: unused variable 'tSINA' [-Wunused-variable] gcc MTString.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTString.m.o gcc MTStream.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTStream.m.o gcc MTFileStream.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTFileStream.m.o MTFileStream.m: In function '+[MTFileStream isFileCompressed:]': MTFileStream.m:324:8: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] gcc MTCompressedFileStream.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTCompressedFileStream.m.o gcc MTMatrix53.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTMatrix53.m.o gcc MTMatrix44.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTMatrix44.m.o gcc MTMatrix.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTMatrix.m.o gcc privateMTMatrix.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/privateMTMatrix.m.o gcc MTVector.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTVector.m.o gcc MTPDBParser.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTPDBParser.m.o MTPDBParser.m: In function '-[MTPDBParser(Private) readAtom:]': MTPDBParser.m:523:15: warning: variable 'occ' set but not used [-Wunused-but-set-variable] MTPDBParser.m: In function '-[MTPDBParser(Private) readHetatom:]': MTPDBParser.m:711:15: warning: variable 'occ' set but not used [-Wunused-but-set-variable] MTPDBParser.m: In function '-[MTPDBParser(Private) readModres:]': MTPDBParser.m:1416:12: warning: variable 'hname' set but not used [-Wunused-but-set-variable] MTPDBParser.m: In function '-[MTPDBParser(Private) readAtom:]': MTPDBParser.m:561:8: warning: array subscript is above array bounds [-Warray-bounds] MTPDBParser.m:582:30: warning: array subscript is above array bounds [-Warray-bounds] MTPDBParser.m:635:61: warning: 'segid[3]' may be used uninitialized in this function [-Wuninitialized] MTPDBParser.m:638:4: warning: 'segid[2u]' may be used uninitialized in this function [-Wuninitialized] MTPDBParser.m:638:4: warning: 'segid[1u]' may be used uninitialized in this function [-Wuninitialized] MTPDBParser.m:638:4: warning: 'segid[0u]' may be used uninitialized in this function [-Wuninitialized] MTPDBParser.m: In function '-[MTPDBParser(Private) readHetatom:]': MTPDBParser.m:787:30: warning: array subscript is above array bounds [-Warray-bounds] MTPDBParser.m:828:61: warning: 'segid[3]' may be used uninitialized in this function [-Wuninitialized] MTPDBParser.m:831:4: warning: 'segid[2u]' may be used uninitialized in this function [-Wuninitialized] MTPDBParser.m:831:4: warning: 'segid[1u]' may be used uninitialized in this function [-Wuninitialized] MTPDBParser.m:831:4: warning: 'segid[0u]' may be used uninitialized in this function [-Wuninitialized] gcc MTPairwiseStrxAlignment.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTPairwiseStrxAlignment.m.o MTPairwiseStrxAlignment.m: In function '-[MTPairwiseStrxAlignment optimize]': MTPairwiseStrxAlignment.m:244:17: warning: variable 'preverr' set but not used [-Wunused-but-set-variable] MTPairwiseStrxAlignment.m:236:6: warning: variable 'maxaligned' set but not used [-Wunused-but-set-variable] MTPairwiseStrxAlignment.m: At top level: blosum45.h:2:14: warning: 'substitutionMatrixBlosum45' defined but not used [-Wunused-variable] blosum62.h:1:14: warning: 'substitutionMatrixBlosum62' defined but not used [-Wunused-variable] blosum80.h:1:14: warning: 'substitutionMatrixBlosum80' defined but not used [-Wunused-variable] gcc MTPairwiseSequenceAlignment.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTPairwiseSequenceAlignment.m.o MTPairwiseSequenceAlignment.m: In function '-[MTPairwiseSequenceAlignment writeFastaToStream:]': MTPairwiseSequenceAlignment.m:930:6: warning: 'strx' may be used uninitialized in this function [-Wuninitialized] MTPairwiseSequenceAlignment.m:930:11: warning: 'ch' may be used uninitialized in this function [-Wuninitialized] gcc MTSubstitutionMatrix.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTSubstitutionMatrix.m.o gcc MTStructureFactory.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTStructureFactory.m.o gcc MTChainFactory.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTChainFactory.m.o gcc MTResidueFactory.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTResidueFactory.m.o gcc NSScanner+additions.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/NSScanner+additions.m.o gcc MTAtomFactory.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTAtomFactory.m.o gcc MTQuaternion.m -c \ -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/MolTalk.obj/MTQuaternion.m.o classes=""; \ for object_file in ./obj/MolTalk.obj/MTAtom.m.o ./obj/MolTalk.obj/MTAlPos.m.o ./obj/MolTalk.obj/MTChain.m.o ./obj/MolTalk.obj/privateMTChain.m.o ./obj/MolTalk.obj/MTCoordinates.m.o ./obj/MolTalk.obj/MTResidue.m.o ./obj/MolTalk.obj/privateMTResidue.m.o ./obj/MolTalk.obj/MTSelection.m.o ./obj/MolTalk.obj/privateMTSelection.m.o ./obj/MolTalk.obj/MTStructure.m.o ./obj/MolTalk.obj/privateMTStructure.m.o ./obj/MolTalk.obj/MTString.m.o ./obj/MolTalk.obj/MTStream.m.o ./obj/MolTalk.obj/MTFileStream.m.o ./obj/MolTalk.obj/MTCompressedFileStream.m.o ./obj/MolTalk.obj/MTMatrix53.m.o ./obj/MolTalk.obj/MTMatrix44.m.o ./obj/MolTalk.obj/MTMatrix.m.o ./obj/MolTalk.obj/privateMTMatrix.m.o ./obj/MolTalk.obj/MTVector.m.o ./obj/MolTalk.obj/MTPDBParser.m.o ./obj/MolTalk.obj/MTPairwiseStrxAlignment.m.o ./obj/MolTalk.obj/MTPairwiseSequenceAlignment.m.o ./obj/MolTalk.obj/MTSubstitutionMatrix.m.o ./obj/MolTalk.obj/MTStructureFactory.m.o ./obj/MolTalk.obj/MTChainFactory.m.o ./obj/MolTalk.obj/MTResidueFactory.m.o ./obj/MolTalk.obj/NSScanner+additions.m.o ./obj/MolTalk.obj/MTAtomFactory.m.o ./obj/MolTalk.obj/MTQuaternion.m.o __dummy__; do \ if [ "$object_file" != "__dummy__" ]; then \ sym=`nm -Pg $object_file | sed -n -e '/^__objc_class_name_[A-Za-z0-9_.]* [^U]/ {s/^__objc_class_name_\([A-Za-z0-9_.]*\) [^U].*/\1/p;}'`; \ classes="$classes $sym"; \ fi; \ done; \ classlist=""; \ classarray=""; \ for f in $classes __dummy__ ; do \ if [ "$f" != "__dummy__" ]; then \ if [ "$classlist" = "" ]; then \ classlist="@\"$f\""; \ classarray="(\"$f\""; \ else \ classlist="$classlist, @\"$f\""; \ classarray="$classarray, \"$f\""; \ fi; \ fi; \ done; \ if [ "$classlist" = "" ]; then \ classlist="NULL"; \ classarray="()"; \ else \ classlist="$classlist, NULL"; \ classarray="$classarray)"; \ fi; \ echo "$classarray" > ./derived_src/MolTalk-class-list; \ echo "#include " > derived_src/NSFramework_MolTalk.m; \ echo "@interface NSFramework_MolTalk" >> derived_src/NSFramework_MolTalk.m; \ echo "+ (NSString *)frameworkEnv;" >> derived_src/NSFramework_MolTalk.m; \ echo "+ (NSString *)frameworkPath;" >> derived_src/NSFramework_MolTalk.m; \ echo "+ (NSString *)frameworkVersion;" >> derived_src/NSFramework_MolTalk.m; \ echo "+ (NSString **)frameworkClasses;" >> derived_src/NSFramework_MolTalk.m; \ echo "@end" >> derived_src/NSFramework_MolTalk.m; \ echo "@implementation NSFramework_MolTalk" >> derived_src/NSFramework_MolTalk.m; \ echo "+ (NSString *)frameworkEnv { return nil; }" >> derived_src/NSFramework_MolTalk.m; \ echo "+ (NSString *)frameworkPath { return @\"/home/buildd/GNUstep/Library/Frameworks\"; }" >> derived_src/NSFramework_MolTalk.m; \ echo "+ (NSString *)frameworkVersion { return @\"3\"; }" >> derived_src/NSFramework_MolTalk.m; \ echo "static NSString *allClasses[] = {$classlist};" >> derived_src/NSFramework_MolTalk.m; \ echo "+ (NSString **)frameworkClasses { return allClasses; }" >> derived_src/NSFramework_MolTalk.m;\ echo "@end" >> derived_src/NSFramework_MolTalk.m gcc derived_src/NSFramework_MolTalk.m -c -MMD -MP -DMT_VERSION=\"3.0.1\" -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -DUNSAFEENV -D none -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep -o obj/MolTalk.obj/NSFramework_MolTalk.o \ gcc -shared -Wl,-soname,libMolTalk.so.3 -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -o ./MolTalk.framework/Versions/3/./libMolTalk.so.3.0.1 obj/MolTalk.obj/NSFramework_MolTalk.o obj/MolTalk.obj/MolTalk.c.o obj/MolTalk.obj/MTAtom.m.o obj/MolTalk.obj/MTAlPos.m.o obj/MolTalk.obj/MTChain.m.o obj/MolTalk.obj/privateMTChain.m.o obj/MolTalk.obj/MTCoordinates.m.o obj/MolTalk.obj/MTResidue.m.o obj/MolTalk.obj/privateMTResidue.m.o obj/MolTalk.obj/MTSelection.m.o obj/MolTalk.obj/privateMTSelection.m.o obj/MolTalk.obj/MTStructure.m.o obj/MolTalk.obj/privateMTStructure.m.o obj/MolTalk.obj/MTString.m.o obj/MolTalk.obj/MTStream.m.o obj/MolTalk.obj/MTFileStream.m.o obj/MolTalk.obj/MTCompressedFileStream.m.o obj/MolTalk.obj/MTMatrix53.m.o obj/MolTalk.obj/MTMatrix44.m.o obj/MolTalk.obj/MTMatrix.m.o obj/MolTalk.obj/privateMTMatrix.m.o obj/MolTalk.obj/MTVector.m.o obj/MolTalk.obj/MTPDBParser.m.o obj/MolTalk.obj/MTPairwiseStrxAlignment.m.o obj/MolTalk.obj/MTPairwiseSequenceAlignment.m.o obj/MolTalk.obj/MTSubstitutionMatrix.m.o obj/MolTalk.obj/MTStructureFactory.m.o obj/MolTalk.obj/MTChainFactory.m.o obj/MolTalk.obj/MTResidueFactory.m.o obj/MolTalk.obj/NSScanner+additions.m.o obj/MolTalk.obj/MTAtomFactory.m.o obj/MolTalk.obj/MTQuaternion.m.o -L/usr/local/lib -L/usr/lib -lm -lgnustep-base -lobjc && (cd ./MolTalk.framework/Versions/3/.; rm -f libMolTalk.so; if [ "libMolTalk.so.3" != "libMolTalk.so.3.0.1" ]; then rm -f libMolTalk.so.3; ln -s libMolTalk.so.3.0.1 libMolTalk.so.3; fi; ln -s libMolTalk.so.3 libMolTalk.so; ) || rm -f ./MolTalk.framework/Versions/3/./libMolTalk.so.3.0.1 ; \ (cd ./MolTalk.framework/Versions/3/.; \ rm -f MolTalk; \ ln -s libMolTalk.so MolTalk) \ for f in Resources/ScriptingInfo.plist; do \ if [ -f $f -o -d $f ]; then \ cp -fr $f ./MolTalk.framework/Versions/3/Resources/; \ else \ echo "Warning: $f not found - ignoring"; \ fi; \ done (echo "{"; echo ' NOTE = "Automatically generated, do not edit!";'; \ echo " NSExecutable = \"MolTalk\";"; \ echo " NSMainNibFile = \"\";"; \ echo " NSPrincipalClass = \"MolTalk\";"; \ echo " Classes = "; \ cat ./derived_src/MolTalk-class-list; \ echo " ;"; \ echo "}") >MolTalk.framework/Versions/3/Resources/Info-gnustep.plist if [ -r "MolTalkInfo.plist" ]; then \ plmerge MolTalk.framework/Versions/3/Resources/Info-gnustep.plist MolTalkInfo.plist; \ fi cd ./MolTalk.framework/.; \ rm -f MolTalk libMolTalk.so; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh . \ Versions/Current/./MolTalk short` \ MolTalk; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh . \ Versions/Current/./libMolTalk.so short` \ libMolTalk.so make[1]: Leaving directory `/build/buildd/adun.app-0.81/MolTalk' Making all in UL/ ... make[1]: Entering directory `/build/buildd/adun.app-0.81/UL' Making all in XMLLib ... make[2]: Entering directory `/build/buildd/adun.app-0.81/UL/XMLLib' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for library libXMLLib... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/libXMLLib.obj/ gcc XMLDocumentRoot.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/XMLDocumentRoot.m.o gcc XMLNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/XMLNode.m.o gcc ULParameterNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULParameterNode.m.o gcc ULTopologyNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULTopologyNode.m.o gcc ULClassNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULClassNode.m.o gcc ULInteractionNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULInteractionNode.m.o gcc ULParameterTree.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULParameterTree.m.o gcc ULMolecularLibraryNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULMolecularLibraryNode.m.o gcc ULMoleculeClassNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULMoleculeClassNode.m.o gcc ULMoleculeNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULMoleculeNode.m.o gcc ULConnectivityNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULConnectivityNode.m.o gcc ULAtomListNode.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULAtomListNode.m.o gcc ULMolecularLibraryTree.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I../ -I../../Kernel -I../../Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/libXMLLib.obj/ULMolecularLibraryTree.m.o gcc -shared -Wl,-soname,libXMLLib.so.0 -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -o ./obj/libXMLLib.so.0.1 obj/libXMLLib.obj/XMLDocumentRoot.m.o obj/libXMLLib.obj/XMLNode.m.o obj/libXMLLib.obj/ULParameterNode.m.o obj/libXMLLib.obj/ULTopologyNode.m.o obj/libXMLLib.obj/ULClassNode.m.o obj/libXMLLib.obj/ULInteractionNode.m.o obj/libXMLLib.obj/ULParameterTree.m.o obj/libXMLLib.obj/ULMolecularLibraryNode.m.o obj/libXMLLib.obj/ULMoleculeClassNode.m.o obj/libXMLLib.obj/ULMoleculeNode.m.o obj/libXMLLib.obj/ULConnectivityNode.m.o obj/libXMLLib.obj/ULAtomListNode.m.o obj/libXMLLib.obj/ULMolecularLibraryTree.m.o -L/build/buildd/adun.app-0.81/Kernel/AdunKernel/AdunKernel.framework/Versions/Current -L/usr/local/lib -L/usr/lib -lAdunKernel -lgnustep-base -lobjc && (cd ./obj; rm -f libXMLLib.so; if [ "libXMLLib.so.0" != "libXMLLib.so.0.1" ]; then rm -f libXMLLib.so.0; ln -s libXMLLib.so.0.1 libXMLLib.so.0; fi; ln -s libXMLLib.so.0 libXMLLib.so; ) make[2]: Leaving directory `/build/buildd/adun.app-0.81/UL/XMLLib' Making all in ULFramework ... make[2]: Entering directory `/build/buildd/adun.app-0.81/UL/ULFramework' Making build-headers for framework ULFramework... /usr/share/GNUstep/Makefiles/mkinstalldirs ULFramework.framework/Versions/0/Headers /usr/bin/install -c -p -m 644 ULFrameworkFunctions.h ULFramework.framework/Versions/0/Headers/ULFrameworkFunctions.h /usr/bin/install -c -p -m 644 ULFrameworkDefinitions.h ULFramework.framework/Versions/0/Headers/ULFrameworkDefinitions.h /usr/bin/install -c -p -m 644 PDBConfigurationBuilder.h ULFramework.framework/Versions/0/Headers/PDBConfigurationBuilder.h /usr/bin/install -c -p -m 644 ULConfigurationBuilder.h ULFramework.framework/Versions/0/Headers/ULConfigurationBuilder.h /usr/bin/install -c -p -m 644 ULDatabaseIndex.h ULFramework.framework/Versions/0/Headers/ULDatabaseIndex.h /usr/bin/install -c -p -m 644 ULDatabaseSimulationIndex.h ULFramework.framework/Versions/0/Headers/ULDatabaseSimulationIndex.h /usr/bin/install -c -p -m 644 ULDatabaseInterface.h ULFramework.framework/Versions/0/Headers/ULDatabaseInterface.h /usr/bin/install -c -p -m 644 ULFileSystemDatabaseBackend.h ULFramework.framework/Versions/0/Headers/ULFileSystemDatabaseBackend.h /usr/bin/install -c -p -m 644 ULInteractionsBuilder.h ULFramework.framework/Versions/0/Headers/ULInteractionsBuilder.h /usr/bin/install -c -p -m 644 ULIOManager.h ULFramework.framework/Versions/0/Headers/ULIOManager.h /usr/bin/install -c -p -m 644 ULMerger.h ULFramework.framework/Versions/0/Headers/ULMerger.h /usr/bin/install -c -p -m 644 ULProcess.h ULFramework.framework/Versions/0/Headers/ULProcess.h /usr/bin/install -c -p -m 644 ULProcessManager.h ULFramework.framework/Versions/0/Headers/ULProcessManager.h /usr/bin/install -c -p -m 644 ULServerManager.h ULFramework.framework/Versions/0/Headers/ULServerManager.h /usr/bin/install -c -p -m 644 ULAnalysisManager.h ULFramework.framework/Versions/0/Headers/ULAnalysisManager.h /usr/bin/install -c -p -m 644 ULSimpleMergerDelegate.h ULFramework.framework/Versions/0/Headers/ULSimpleMergerDelegate.h /usr/bin/install -c -p -m 644 ULSystem.h ULFramework.framework/Versions/0/Headers/ULSystem.h /usr/bin/install -c -p -m 644 ULSystemBuilder.h ULFramework.framework/Versions/0/Headers/ULSystemBuilder.h /usr/bin/install -c -p -m 644 ULSystemController.h ULFramework.framework/Versions/0/Headers/ULSystemController.h /usr/bin/install -c -p -m 644 ULTopologyFrameBuilder.h ULFramework.framework/Versions/0/Headers/ULTopologyFrameBuilder.h /usr/bin/install -c -p -m 644 ULConfigurationPlugin.h ULFramework.framework/Versions/0/Headers/ULConfigurationPlugin.h /usr/bin/install -c -p -m 644 ULMergerDelegate.h ULFramework.framework/Versions/0/Headers/ULMergerDelegate.h /usr/bin/install -c -p -m 644 ULServerInterface.h ULFramework.framework/Versions/0/Headers/ULServerInterface.h /usr/bin/install -c -p -m 644 ULMenuExtensions.h ULFramework.framework/Versions/0/Headers/ULMenuExtensions.h /usr/bin/install -c -p -m 644 ULTemplate.h ULFramework.framework/Versions/0/Headers/ULTemplate.h /usr/bin/install -c -p -m 644 ULAnalysisPlugin.h ULFramework.framework/Versions/0/Headers/ULAnalysisPlugin.h /usr/bin/install -c -p -m 644 ULFramework.h ULFramework.framework/Versions/0/Headers/ULFramework.h /usr/share/GNUstep/Makefiles/mkinstalldirs ./derived_src; \ touch derived_src/.stamp /usr/share/GNUstep/Makefiles/mkinstalldirs ULFramework.framework/Versions/0/Resources cd ./ULFramework.framework/Versions; \ rm -f Current; \ ln -s 0 Current cd ./ULFramework.framework; \ if [ ! -h "Resources" ]; then \ rm -f Resources; \ ln -s Versions/Current/Resources Resources; \ fi; \ if [ ! -h "Headers" ]; then \ rm -f Headers; \ ln -s Versions/Current/Headers Headers; \ fi cd ./derived_src; \ if [ ! -h "ULFramework" ]; then \ rm -f ./ULFramework; \ ln -s ../ULFramework.framework/Headers \ ./ULFramework; \ fi cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for framework ULFramework... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/ULFramework.obj/ gcc ULFrameworkFunctions.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULFrameworkFunctions.m.o gcc PDBConfigurationBuilder.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/PDBConfigurationBuilder.m.o PDBConfigurationBuilder.m: In function '-[PDBConfigurationBuilder _processChain:section:selection:atomMatrix:]': PDBConfigurationBuilder.m:167:14: warning: variable 'residueName' set but not used [-Wunused-but-set-variable] PDBConfigurationBuilder.m: In function '-[PDBConfigurationBuilder initWithMoleculeAtPath:]': PDBConfigurationBuilder.m:435:12: warning: unused variable 'temp' [-Wunused-variable] PDBConfigurationBuilder.m:433:12: warning: variable 'pathExtension' set but not used [-Wunused-but-set-variable] PDBConfigurationBuilder.m: In function '-[PDBStructureModifier init]': PDBConfigurationBuilder.m:866:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m: In function '-[PDBStructureModifier modifyStructureForEnzymix:]': PDBConfigurationBuilder.m:931:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:934:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m: In function '-[PDBStructureModifier removeEnzymixStructureModifications:]': PDBConfigurationBuilder.m:960:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:963:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:957:10: warning: unused variable 'atom' [-Wunused-variable] PDBConfigurationBuilder.m: In function '-[PDBStructureModifier _renumberHeterogensAndSolvent:]': PDBConfigurationBuilder.m:987:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1019:4: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1021:5: warning: 'MTResidue' may not respond to '-setNumber:' [enabled by default] PDBConfigurationBuilder.m:1021:5: warning: (Messages without a matching method signature [enabled by default] PDBConfigurationBuilder.m:1021:5: warning: will be assumed to return 'id' and accept [enabled by default] PDBConfigurationBuilder.m:1021:5: warning: '...' as arguments.) [enabled by default] PDBConfigurationBuilder.m: In function '-[PDBStructureModifier _addCharmmTermini:]': PDBConfigurationBuilder.m:1056:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1076:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1106:4: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1109:5: warning: 'MTResidue' may not respond to '-setNumber:' [enabled by default] PDBConfigurationBuilder.m:1119:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1141:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1157:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1186:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m: In function '-[PDBStructureModifier modifyStructureForCharmm:]': PDBConfigurationBuilder.m:1222:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1225:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m: In function '-[PDBStructureModifier removeCharmmStructureModifications:]': PDBConfigurationBuilder.m:1263:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1266:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] PDBConfigurationBuilder.m:1260:10: warning: unused variable 'atom' [-Wunused-variable] PDBConfigurationBuilder.m: In function '-[PDBConfigurationBuilder _structureObjectForPDB:]': PDBConfigurationBuilder.m:64:2: warning: 'molStruct' may be used uninitialized in this function [-Wuninitialized] PDBConfigurationBuilder.m: In function '-[PDBConfigurationBuilder _processChain:section:selection:atomMatrix:]': PDBConfigurationBuilder.m:224:8: warning: 'residueEnum' may be used uninitialized in this function [-Wuninitialized] gcc ULConfigurationBuilder.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULConfigurationBuilder.m.o ULConfigurationBuilder.m: In function '+[ULConfigurationBuilder builderForMoleculeAtPath:]': ULConfigurationBuilder.m:32:12: warning: variable 'pathExtension' set but not used [-Wunused-but-set-variable] gcc ULDatabaseIndex.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULDatabaseIndex.m.o ULDatabaseIndex.m: In function '-[ULDatabaseIndex removeObjectsWithIds:error:]': ULDatabaseIndex.m:378:2: warning: 'retval' may be used uninitialized in this function [-Wuninitialized] ULDatabaseIndex.m: In function '-[ULDatabaseIndex removeOutputReferenceToObjectWithId:fromObjectWithId:]': ULDatabaseIndex.m:396:4: warning: 'ident' may be used uninitialized in this function [-Wuninitialized] ULDatabaseIndex.m: In function '-[ULDatabaseIndex initWithCoder:]': ULDatabaseIndex.m:589:2: warning: 'date' may be used uninitialized in this function [-Wuninitialized] ULDatabaseIndex.m:589:2: warning: 'lastSaveDate' may be used uninitialized in this function [-Wuninitialized] gcc ULDatabaseSimulationIndex.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULDatabaseSimulationIndex.m.o gcc ULDatabaseInterface.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULDatabaseInterface.m.o gcc ULFileSystemDatabaseBackend.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULFileSystemDatabaseBackend.m.o ULFileSystemDatabaseBackend.m: In function '-[ULFileSystemDatabaseBackend _saveIndex:ofClass:]': ULFileSystemDatabaseBackend.m:113:2: warning: 'file' may be used uninitialized in this function [-Wuninitialized] ULFileSystemDatabaseBackend.m: In function '-[ULFileSystemDatabaseBackend updateMetadataForObject:inSchema:error:]': ULFileSystemDatabaseBackend.m:845:7: warning: 'retval' may be used uninitialized in this function [-Wuninitialized] ULFileSystemDatabaseBackend.m: In function '-[ULFileSystemDatabaseBackend removeObjectOfClass:withID:fromSchema:error:]': ULFileSystemDatabaseBackend.m:995:7: warning: 'retval' may be used uninitialized in this function [-Wuninitialized] ULFileSystemDatabaseBackend.m: In function '-[ULFileSystemDatabaseBackend removeObjectsOfClass:withIDs:fromSchema:error:]': ULFileSystemDatabaseBackend.m:1077:5: warning: 'retval' may be used uninitialized in this function [-Wuninitialized] gcc ULInteractionsBuilder.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULInteractionsBuilder.m.o gcc ULIOManager.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULIOManager.m.o ULIOManager.m: In function '-[ULIOManager _importQuickStartFiles]': ULIOManager.m:64:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULIOManager.m: In function '-[NSFileManager(ULExtensions) createDirectoryAtPath:attributes:error:]': ULIOManager.m:389:12: warning: variable 'containingDir' set but not used [-Wunused-but-set-variable] gcc ULMerger.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULMerger.m.o ULMerger.m: In function '-[ULMerger mergeTopologyFrame:withConfiguration:error:userInfo:]': ULMerger.m:159:49: warning: variable 'indexes' set but not used [-Wunused-but-set-variable] gcc ULProcess.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULProcess.m.o ULProcess.m: In function '-[ULProcess setSimulationData:]': ULProcess.m:225:12: warning: variable 'ident' set but not used [-Wunused-but-set-variable] ULProcess.m: In function '-[ULProcess setControllerResults:]': ULProcess.m:215:4: warning: 'dataSet' is used uninitialized in this function [-Wuninitialized] gcc ULProcessManager.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULProcessManager.m.o ULProcessManager.m: In function '-[ULProcessManager optionsForCommand:process:]': ULProcessManager.m:811:4: warning: 'proxy' may be used uninitialized in this function [-Wuninitialized] ULProcessManager.m: In function '-[ULProcessManager validCommandsForProcess:]': ULProcessManager.m:825:2: warning: 'proxy' may be used uninitialized in this function [-Wuninitialized] ULProcessManager.m: In function '-[ULProcessManager execute:error:process:]': ULProcessManager.m:797:2: warning: 'result' may be used uninitialized in this function [-Wuninitialized] ULProcessManager.m:793:6: warning: 'proxy' may be used uninitialized in this function [-Wuninitialized] gcc ULServerManager.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULServerManager.m.o ULServerManager.m: In function '-[ULServerManager(ConnectionMethods) _handleConnectionDidDie:]': ULServerManager.m:84:23: warning: unused variable 'errorInfo' [-Wunused-variable] ULServerManager.m: In function '-[ULServerManager(ConnectionMethods) _removeConnectionToHost:]': ULServerManager.m:292:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULServerManager.m:265:5: warning: variable 'server' set but not used [-Wunused-but-set-variable] ULServerManager.m: In function '-[ULServerManager init]': ULServerManager.m:338:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULServerManager.m:351:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULServerManager.m: In function '-[ULServerManager dealloc]': ULServerManager.m:378:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULServerManager.m: In function '-[ULServerManager checkPortTimeoutException:]': ULServerManager.m:506:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc ULAnalysisManager.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULAnalysisManager.m.o ULAnalysisManager.m: In function '-[ULAnalysisManager _addPluginsInDirectory:]': ULAnalysisManager.m:83:66: warning: unused variable 'resourceFilename' [-Wunused-variable] ULAnalysisManager.m:83:48: warning: unused variable 'pluginOutputDir' [-Wunused-variable] ULAnalysisManager.m:83:35: warning: unused variable 'pluginName' [-Wunused-variable] ULAnalysisManager.m:82:32: warning: unused variable 'pluginEnum' [-Wunused-variable] ULAnalysisManager.m:142:1: warning: no return statement in function returning non-void [-Wreturn-type] ULAnalysisManager.m: In function '-[ULAnalysisManager locationOfPlugin:]': ULAnalysisManager.m:581:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc ULSimpleMergerDelegate.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULSimpleMergerDelegate.m.o gcc ULSystem.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULSystem.m.o gcc ULSystemBuilder.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULSystemBuilder.m.o ULSystemBuilder.m: In function '+[ULSystemBuilder initialize]': ULSystemBuilder.m:32:5: warning: unused variable 'debugLevels' [-Wunused-variable] gcc ULSystemController.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULSystemController.m.o gcc ULMenuExtensions.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULMenuExtensions.m.o gcc ULTemplate.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULTemplate.m.o ULTemplate.m: In function '-[ULTemplate validateTemplate:]': ULTemplate.m:593:11: warning: variable 'names' set but not used [-Wunused-but-set-variable] ULTemplate.m: In function '-[ULTemplate(PrivateObjectAdditions) _addObjectTemplate:withName:toSection:]': ULTemplate.m:168:5: warning: 'className' may be used uninitialized in this function [-Wuninitialized] gcc ULTopologyFrameBuilder.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULTopologyFrameBuilder.m.o gcc ULURLDownload.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/ULFramework.obj/ULURLDownload.m.o classes=""; \ for object_file in ./obj/ULFramework.obj/ULFrameworkFunctions.m.o ./obj/ULFramework.obj/PDBConfigurationBuilder.m.o ./obj/ULFramework.obj/ULConfigurationBuilder.m.o ./obj/ULFramework.obj/ULDatabaseIndex.m.o ./obj/ULFramework.obj/ULDatabaseSimulationIndex.m.o ./obj/ULFramework.obj/ULDatabaseInterface.m.o ./obj/ULFramework.obj/ULFileSystemDatabaseBackend.m.o ./obj/ULFramework.obj/ULInteractionsBuilder.m.o ./obj/ULFramework.obj/ULIOManager.m.o ./obj/ULFramework.obj/ULMerger.m.o ./obj/ULFramework.obj/ULProcess.m.o ./obj/ULFramework.obj/ULProcessManager.m.o ./obj/ULFramework.obj/ULServerManager.m.o ./obj/ULFramework.obj/ULAnalysisManager.m.o ./obj/ULFramework.obj/ULSimpleMergerDelegate.m.o ./obj/ULFramework.obj/ULSystem.m.o ./obj/ULFramework.obj/ULSystemBuilder.m.o ./obj/ULFramework.obj/ULSystemController.m.o ./obj/ULFramework.obj/ULMenuExtensions.m.o ./obj/ULFramework.obj/ULTemplate.m.o ./obj/ULFramework.obj/ULTopologyFrameBuilder.m.o ./obj/ULFramework.obj/ULURLDownload.m.o __dummy__; do \ if [ "$object_file" != "__dummy__" ]; then \ sym=`nm -Pg $object_file | sed -n -e '/^__objc_class_name_[A-Za-z0-9_.]* [^U]/ {s/^__objc_class_name_\([A-Za-z0-9_.]*\) [^U].*/\1/p;}'`; \ classes="$classes $sym"; \ fi; \ done; \ classlist=""; \ classarray=""; \ for f in $classes __dummy__ ; do \ if [ "$f" != "__dummy__" ]; then \ if [ "$classlist" = "" ]; then \ classlist="@\"$f\""; \ classarray="(\"$f\""; \ else \ classlist="$classlist, @\"$f\""; \ classarray="$classarray, \"$f\""; \ fi; \ fi; \ done; \ if [ "$classlist" = "" ]; then \ classlist="NULL"; \ classarray="()"; \ else \ classlist="$classlist, NULL"; \ classarray="$classarray)"; \ fi; \ echo "$classarray" > ./derived_src/ULFramework-class-list; \ echo "#include " > derived_src/NSFramework_ULFramework.m; \ echo "@interface NSFramework_ULFramework" >> derived_src/NSFramework_ULFramework.m; \ echo "+ (NSString *)frameworkEnv;" >> derived_src/NSFramework_ULFramework.m; \ echo "+ (NSString *)frameworkPath;" >> derived_src/NSFramework_ULFramework.m; \ echo "+ (NSString *)frameworkVersion;" >> derived_src/NSFramework_ULFramework.m; \ echo "+ (NSString **)frameworkClasses;" >> derived_src/NSFramework_ULFramework.m; \ echo "@end" >> derived_src/NSFramework_ULFramework.m; \ echo "@implementation NSFramework_ULFramework" >> derived_src/NSFramework_ULFramework.m; \ echo "+ (NSString *)frameworkEnv { return nil; }" >> derived_src/NSFramework_ULFramework.m; \ echo "+ (NSString *)frameworkPath { return @\"/home/buildd/GNUstep/Library/Frameworks\"; }" >> derived_src/NSFramework_ULFramework.m; \ echo "+ (NSString *)frameworkVersion { return @\"0\"; }" >> derived_src/NSFramework_ULFramework.m; \ echo "static NSString *allClasses[] = {$classlist};" >> derived_src/NSFramework_ULFramework.m; \ echo "+ (NSString **)frameworkClasses { return allClasses; }" >> derived_src/NSFramework_ULFramework.m;\ echo "@end" >> derived_src/NSFramework_ULFramework.m gcc derived_src/NSFramework_ULFramework.m -c -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/UL/XMLLib -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I../ -I./derived_src -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep -o obj/ULFramework.obj/NSFramework_ULFramework.o \ gcc -shared -Wl,-soname,libULFramework.so.0 -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -o ./ULFramework.framework/Versions/0/./libULFramework.so.0.6 obj/ULFramework.obj/NSFramework_ULFramework.o obj/ULFramework.obj/ULFrameworkFunctions.m.o obj/ULFramework.obj/PDBConfigurationBuilder.m.o obj/ULFramework.obj/ULConfigurationBuilder.m.o obj/ULFramework.obj/ULDatabaseIndex.m.o obj/ULFramework.obj/ULDatabaseSimulationIndex.m.o obj/ULFramework.obj/ULDatabaseInterface.m.o obj/ULFramework.obj/ULFileSystemDatabaseBackend.m.o obj/ULFramework.obj/ULInteractionsBuilder.m.o obj/ULFramework.obj/ULIOManager.m.o obj/ULFramework.obj/ULMerger.m.o obj/ULFramework.obj/ULProcess.m.o obj/ULFramework.obj/ULProcessManager.m.o obj/ULFramework.obj/ULServerManager.m.o obj/ULFramework.obj/ULAnalysisManager.m.o obj/ULFramework.obj/ULSimpleMergerDelegate.m.o obj/ULFramework.obj/ULSystem.m.o obj/ULFramework.obj/ULSystemBuilder.m.o obj/ULFramework.obj/ULSystemController.m.o obj/ULFramework.obj/ULMenuExtensions.m.o obj/ULFramework.obj/ULTemplate.m.o obj/ULFramework.obj/ULTopologyFrameBuilder.m.o obj/ULFramework.obj/ULURLDownload.m.o -L../XMLLib/obj -L/build/buildd/adun.app-0.81/Kernel/AdunKernel/AdunKernel.framework/Versions/Current -L/build/buildd/adun.app-0.81/MolTalk/MolTalk.framework/Versions/Current -L/usr/local/lib -L/usr/lib -lAdunKernel -lMolTalk -lXMLLib -lgsl -lgslcblas -lm -lgnustep-base -lobjc && (cd ./ULFramework.framework/Versions/0/.; rm -f libULFramework.so; if [ "libULFramework.so.0" != "libULFramework.so.0.6" ]; then rm -f libULFramework.so.0; ln -s libULFramework.so.0.6 libULFramework.so.0; fi; ln -s libULFramework.so.0 libULFramework.so; ) || rm -f ./ULFramework.framework/Versions/0/./libULFramework.so.0.6 ; \ (cd ./ULFramework.framework/Versions/0/.; \ rm -f ULFramework; \ ln -s libULFramework.so ULFramework) \ for f in Resources/ScriptingInfo.plist Resources/objectTemplates.plist Resources/pdbBuilderOptions.plist Resources/pdbNameMap.plist Resources/iupacPdbMap.plist Resources/Version Resources/ForceFields; do \ if [ -f $f -o -d $f ]; then \ cp -fr $f ./ULFramework.framework/Versions/0/Resources/; \ else \ echo "Warning: $f not found - ignoring"; \ fi; \ done (echo "{"; echo ' NOTE = "Automatically generated, do not edit!";'; \ echo " NSExecutable = \"ULFramework\";"; \ echo " NSMainNibFile = \"\";"; \ echo " NSPrincipalClass = \"ULFramework\";"; \ echo " Classes = "; \ cat ./derived_src/ULFramework-class-list; \ echo " ;"; \ echo "}") >ULFramework.framework/Versions/0/Resources/Info-gnustep.plist if [ -r "ULFrameworkInfo.plist" ]; then \ plmerge ULFramework.framework/Versions/0/Resources/Info-gnustep.plist ULFrameworkInfo.plist; \ fi cd ./ULFramework.framework/.; \ rm -f ULFramework libULFramework.so; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh . \ Versions/Current/./ULFramework short` \ ULFramework; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh . \ Versions/Current/./libULFramework.so short` \ libULFramework.so make[2]: Leaving directory `/build/buildd/adun.app-0.81/UL/ULFramework' Making all in AdunServer ... make[2]: Entering directory `/build/buildd/adun.app-0.81/UL/AdunServer' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for tool AdunServer... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/AdunServer.obj/ gcc AdServer.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I/build/buildd/adun.app-0.81/Kernel -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/AdunServer.obj/AdServer.m.o AdServer.m: In function '-[AdServer(RemoteSimulationManagement) startSimulation:]': AdServer.m:323:18: warning: unused variable 'arguments' [-Wunused-variable] AdServer.m:321:11: warning: unused variable 'error' [-Wunused-variable] AdServer.m: In function '-[AdServer(RemoteSimulationManagement) reconnectProcess:]': AdServer.m:424:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] AdServer.m: In function '-[AdServer _redirectOutput]': AdServer.m:161:9: warning: ignoring return value of 'freopen', declared with attribute warn_unused_result [-Wunused-result] gcc main.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I/build/buildd/adun.app-0.81/Kernel -I../ -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/AdunServer.obj/main.m.o main.m: In function 'main': main.m:32:5: warning: variable 'server' set but not used [-Wunused-but-set-variable] gcc -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -fgnu-runtime -o obj/AdunServer \ ./obj/AdunServer.obj/AdServer.m.o ./obj/AdunServer.obj/main.m.o \ -L/build/buildd/adun.app-0.81/MolTalk/MolTalk.framework/Versions/Current -L/build/buildd/adun.app-0.81/Kernel/AdunKernel/AdunKernel.framework/Versions/Current/ -L/build/buildd/adun.app-0.81/Kernel/Base/obj -L../ULFramework/ULFramework.framework/Versions/Current -L../XMLLib/obj -L/usr/local/lib -L/usr/lib -lXMLLib -lULFramework -ladun_base -lAdunKernel -lMolTalk -lgnustep-base -lpthread -lobjc -lm make[2]: Leaving directory `/build/buildd/adun.app-0.81/UL/AdunServer' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj Making all for app UL... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/UL.obj/ /usr/share/GNUstep/Makefiles/mkinstalldirs UL.app/. gcc ViewController.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ViewController.m.o ViewController.m: In function '-[ViewController init]': ViewController.m:162:5: warning: unused variable 'icon' [-Wunused-variable] ViewController.m: In function '-[ViewController awakeFromNib]': ViewController.m:252:20: warning: variable 'ioManager' set but not used [-Wunused-but-set-variable] ViewController.m:252:11: warning: unused variable 'columns' [-Wunused-variable] ViewController.m:252:5: warning: unused variable 'item' [-Wunused-variable] ViewController.m:250:10: warning: unused variable 'mainMenu' [-Wunused-variable] ViewController.m: In function '-[ViewController applicationDidFinishLaunching:]': ViewController.m:345:23: warning: unused variable 'userInfo' [-Wunused-variable] ViewController.m: In function '-[ViewController application:openFile:]': ViewController.m:400:1: warning: no return statement in function returning non-void [-Wreturn-type] ViewController.m: In function '-[ViewController handleProcessReconnectionError:]': ViewController.m:503:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ViewController.m: In function '-[ViewController validateSimulationCommand:]': ViewController.m:636:5: warning: unused variable 'selectedItem' [-Wunused-variable] ViewController.m: In function '-[ViewController validateMenuItem:]': ViewController.m:672:5: warning: unused variable 'object' [-Wunused-variable] ViewController.m: In function '-[ViewController _displayFileLinux:]': ViewController.m:754:10: warning: variable 'task' set but not used [-Wunused-but-set-variable] ViewController.m: In function '-[ViewController _displayFileOSX:]': ViewController.m:778:10: warning: variable 'task' set but not used [-Wunused-but-set-variable] ViewController.m: In function '-[ViewController _viewLog:]': ViewController.m:804:12: warning: unused variable 'string' [-Wunused-variable] ViewController.m: In function '-[ViewController init]': ViewController.m:192:10: warning: ignoring return value of 'freopen', declared with attribute warn_unused_result [-Wunused-result] gcc ULSimulationCreator.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULSimulationCreator.m.o ULSimulationCreator.m: In function '-[ULSimulationCreator _checkInputData]': ULSimulationCreator.m:36:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULSimulationCreator.m: In function '-[ULSimulationCreator _checkTemplateReferences]': ULSimulationCreator.m:99:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULSimulationCreator.m: In function '-[ULSimulationCreator init]': ULSimulationCreator.m:123:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULSimulationCreator.m: In function '-[ULSimulationCreator tableView:objectValueForTableColumn:row:]': ULSimulationCreator.m:379:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULSimulationCreator.m:362:19: warning: unused variable 'string' [-Wunused-variable] ULSimulationCreator.m:396:1: warning: control reaches end of non-void function [-Wreturn-type] gcc ULPasteboard.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULPasteboard.m.o ULPasteboard.m: In function '-[ULPasteboard init]': ULPasteboard.m:20:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULPasteboard.m: In function '-[ULPasteboard availableTypeFromArray:]': ULPasteboard.m:54:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULPasteboard.m: In function '-[ULPasteboard setPasteboardOwner:]': ULPasteboard.m:83:2: warning: passing argument 1 of 'pasteboardChangedOwner:' from distinct Objective-C type [enabled by default] gcc ULStatusTable.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULStatusTable.m.o ULStatusTable.m: In function '-[ULStatusTable init]': ULStatusTable.m:53:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULStatusTable.m: In function '-[ULStatusTable awakeFromNib]': ULStatusTable.m:65:12: warning: unused variable 'welcomeString' [-Wunused-variable] ULStatusTable.m: In function '-[ULStatusTable _tryExportProcess:toFile:overwrite:]': ULStatusTable.m:128:2: warning: no '-exportProcess:toFile:overwrite:error:' method found [enabled by default] ULStatusTable.m:128:2: warning: (Messages without a matching method signature [enabled by default] ULStatusTable.m:128:2: warning: will be assumed to return 'id' and accept [enabled by default] ULStatusTable.m:128:2: warning: '...' as arguments.) [enabled by default] ULStatusTable.m: In function '-[ULStatusTable tableView:objectValueForTableColumn:row:]': ULStatusTable.m:344:5: warning: unused variable 'key' [-Wunused-variable] gcc ULViewControllerSimulationCommands.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULViewControllerSimulationCommands.m.o ULViewControllerSimulationCommands.m: In function '-[ViewController(SimulationCommands) halt:]': ULViewControllerSimulationCommands.m:7:6: warning: unused variable 'row' [-Wunused-variable] ULViewControllerSimulationCommands.m: In function '-[ViewController(SimulationCommands) restart:]': ULViewControllerSimulationCommands.m:26:6: warning: unused variable 'row' [-Wunused-variable] ULViewControllerSimulationCommands.m: In function '-[ViewController(SimulationCommands) terminateProcess:]': ULViewControllerSimulationCommands.m:44:6: warning: unused variable 'row' [-Wunused-variable] ULViewControllerSimulationCommands.m: In function '-[ViewController(SimulationCommands) start:]': ULViewControllerSimulationCommands.m:62:6: warning: unused variable 'row' [-Wunused-variable] ULViewControllerSimulationCommands.m: In function '-[ViewController(SimulationCommands) execute:]': ULViewControllerSimulationCommands.m:91:6: warning: unused variable 'row' [-Wunused-variable] gcc ULPropertiesPanel.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULPropertiesPanel.m.o ULPropertiesPanel.m: In function '-[ULPropertiesPanel awakeFromNib]': ULPropertiesPanel.m:98:5: warning: unused variable 'item' [-Wunused-variable] ULPropertiesPanel.m: In function '-[ULPropertiesPanel _displayAnnotations:]': ULPropertiesPanel.m:289:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc ULOutlineViewDelegate.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULOutlineViewDelegate.m.o ULOutlineViewDelegate.m: In function '-[ULNodeWrapper _setChildren]': ULOutlineViewDelegate.m:172:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m: In function '-[ULNodeWrapper childForIdentifier:]': ULOutlineViewDelegate.m:214:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m: In function '-[ULSelectionWrapper _setChildrenForArray]': ULOutlineViewDelegate.m:260:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m:271:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m:285:5: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m: In function '-[ULSelectionWrapper _setChildrenForDictionary]': ULOutlineViewDelegate.m:319:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m:341:5: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m: In function '-[ULSelectionWrapper _setChildren]': ULOutlineViewDelegate.m:375:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m:399:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m: In function '-[ULSelectionWrapper initWithObject:parent:identifier:]': ULOutlineViewDelegate.m:407:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m: In function '-[ULOutlineViewDelegate initWithProperties:allowEditing:]': ULOutlineViewDelegate.m:530:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m: In function '-[ULOutlineViewDelegate initWithOptions:outlineColumnIdentifier:]': ULOutlineViewDelegate.m:554:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULOutlineViewDelegate.m: In function '-[ULOutlineViewDelegate outlineView:setObjectValue:forTableColumn:byItem:]': ULOutlineViewDelegate.m:634:3: warning: 'NSXMLNode' may not respond to '-setValue:forChild:' [enabled by default] ULOutlineViewDelegate.m:634:3: warning: (Messages without a matching method signature [enabled by default] ULOutlineViewDelegate.m:634:3: warning: will be assumed to return 'id' and accept [enabled by default] ULOutlineViewDelegate.m:634:3: warning: '...' as arguments.) [enabled by default] ULOutlineViewDelegate.m: In function '-[ULOutlineViewDelegate outlineViewSelectionDidChange:]': ULOutlineViewDelegate.m:645:19: warning: unused variable 'i' [-Wunused-variable] ULOutlineViewDelegate.m: In function '-[ULSelectionWrapper _setChildrenForArray]': ULOutlineViewDelegate.m:263:4: warning: 'choiceArray' may be used uninitialized in this function [-Wuninitialized] ULOutlineViewDelegate.m: In function '-[ULSelectionWrapper _setChildren]': ULOutlineViewDelegate.m:390:2: warning: 'optionsType' may be used uninitialized in this function [-Wuninitialized] gcc ULSystemViewController.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULSystemViewController.m.o ULSystemViewController.m: In function '-[ULSystemViewController init]': ULSystemViewController.m:40:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULSystemViewController.m: In function '-[ULSystemViewController _insertString:fontType:]': ULSystemViewController.m:102:29: warning: unused variable 'boldString' [-Wunused-variable] ULSystemViewController.m: In function '-[ULSystemViewController handleNotification:]': ULSystemViewController.m:122:10: warning: unused variable 'range' [-Wunused-variable] ULSystemViewController.m: In function '-[ULSystemViewController _setDelegateForOptions:]': ULSystemViewController.m:187:5: warning: passing argument 1 of 'initWithOptions:' makes integer from pointer without a cast [enabled by default] ULSystemViewController.m:187:5: note: expected 'NSPointerFunctionsOptions' but argument is of type 'id' ULSystemViewController.m: In function '-[ULSystemViewController open:]': ULSystemViewController.m:251:10: warning: unused variable 'range' [-Wunused-variable] ULSystemViewController.m: In function '-[ULSystemViewController createSystem:]': ULSystemViewController.m:565:6: warning: unused variable 'choice' [-Wunused-variable] ULSystemViewController.m:562:12: warning: unused variable 'output' [-Wunused-variable] ULSystemViewController.m:561:12: warning: unused variable 'filePath' [-Wunused-variable] ULSystemViewController.m:559:7: warning: unused variable 'cancel' [-Wunused-variable] ULSystemViewController.m: In function '-[ULSystemViewController(PDBDownloadAdditions) downloadFinished]': ULSystemViewController.m:884:10: warning: unused variable 'data' [-Wunused-variable] gcc ULDatabaseBrowser.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULDatabaseBrowser.m.o ULDatabaseBrowser.m: In function '-[ULDatabaseBrowserPath init]': ULDatabaseBrowser.m:30:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULDatabaseBrowser.m: In function '-[ULDatabaseBrowser init]': ULDatabaseBrowser.m:133:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULDatabaseBrowser.m: In function '-[ULDatabaseBrowser awakeFromNib]': ULDatabaseBrowser.m:241:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULDatabaseBrowser.m:167:25: warning: unused variable 'client' [-Wunused-variable] ULDatabaseBrowser.m:167:17: warning: unused variable 'schema' [-Wunused-variable] ULDatabaseBrowser.m:166:17: warning: unused variable 'column' [-Wunused-variable] ULDatabaseBrowser.m:165:16: warning: unused variable 'userInfo' [-Wunused-variable] ULDatabaseBrowser.m:164:16: warning: unused variable 'columnEnum' [-Wunused-variable] ULDatabaseBrowser.m:163:41: warning: unused variable 'schemaEnum' [-Wunused-variable] ULDatabaseBrowser.m:163:28: warning: unused variable 'clientEnum' [-Wunused-variable] ULDatabaseBrowser.m: In function '-[ULDatabaseBrowser _remove:]': ULDatabaseBrowser.m:393:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULDatabaseBrowser.m:435:5: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULDatabaseBrowser.m:546:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULDatabaseBrowser.m: In function '-[ULDatabaseBrowser import:]': ULDatabaseBrowser.m:864:7: warning: unused variable 'retVal' [-Wunused-variable] ULDatabaseBrowser.m: In function '-[ULDatabaseBrowser objectsForType:]': ULDatabaseBrowser.m:1043:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULDatabaseBrowser.m:1059:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULDatabaseBrowser.m: In function '-[ULDatabaseBrowser _remove:]': ULDatabaseBrowser.m:556:4: warning: 'lastRow' may be used uninitialized in this function [-Wuninitialized] gcc ULDatabaseBrowserDataDisplay.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULDatabaseBrowserDataDisplay.m.o ULDatabaseBrowserDataDisplay.m: In function '-[ULDatabaseBrowser(ULDatabaseBrowserDataDisplay) outlineView:child:ofItem:]': ULDatabaseBrowserDataDisplay.m:73:2: warning: 'object' may be used uninitialized in this function [-Wuninitialized] gcc ULAnalyser.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULAnalyser.m.o ULAnalyser.m: In function '-[ULAnalyser awakeFromNib]': ULAnalyser.m:119:11: warning: unused variable 'plugins' [-Wunused-variable] ULAnalyser.m:118:15: warning: variable 'ioManager' set but not used [-Wunused-but-set-variable] ULAnalyser.m: In function '-[ULAnalyser open:]': ULAnalyser.m:213:10: warning: unused variable 'endRange' [-Wunused-variable] ULAnalyser.m: In function '-[ULAnalyser _threadedLoadSimulation:]': ULAnalyser.m:418:5: warning: unused variable 'holder' [-Wunused-variable] ULAnalyser.m: In function '-[ULAnalyser _flushProcessEnergies:]': ULAnalyser.m:496:5: warning: variable 'result' set but not used [-Wunused-but-set-variable] ULAnalyser.m: In function '-[ULAnalyser _loadObject:ofType:]': ULAnalyser.m:590:4: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyser.m: In function '-[ULAnalyser load:]': ULAnalyser.m:605:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyser.m:611:4: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyser.m: In function '-[ULAnalyser remove:]': ULAnalyser.m:625:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyser.m: In function '-[ULAnalyser save:]': ULAnalyser.m:681:30: warning: unused variable 'inputObjectsEnum' [-Wunused-variable] ULAnalyser.m:681:16: warning: unused variable 'resultsEnum' [-Wunused-variable] ULAnalyser.m:680:17: warning: unused variable 'inputObject' [-Wunused-variable] ULAnalyser.m:679:5: warning: unused variable 'dataSet' [-Wunused-variable] ULAnalyser.m: In function '-[ULAnalyser(ULAnalyserDataSetOpening) openDataSets:]': ULAnalyser.m:1055:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyser.m: In function '-[ULAnalyser(ULAnalyserDataSetOpening) openDataSet:]': ULAnalyser.m:1073:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyser.m: In function '-[ULAnalyser(ULAnalyserDataSetOpening) setAvailableDataSets:]': ULAnalyser.m:1138:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyser.m: In function '-[ULAnalyser(ULAnalyserDataSetOpening) dataSetDidChange:]': ULAnalyser.m:1183:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc ULAnalyserPluginExtensions.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULAnalyserPluginExtensions.m.o ULAnalyserPluginExtensions.m: In function '-[ULAnalyser(ULAnalyserPluginExtensions) _displayPluginFiles:]': ULAnalyserPluginExtensions.m:47:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyserPluginExtensions.m: In function '-[ULAnalyser(ULAnalyserPluginExtensions) displayOptionsForPlugin]': ULAnalyserPluginExtensions.m:124:6: warning: passing argument 1 of 'initWithOptions:' makes integer from pointer without a cast [enabled by default] ULAnalyserPluginExtensions.m:124:6: note: expected 'NSPointerFunctionsOptions' but argument is of type 'id' ULAnalyserPluginExtensions.m:135:6: warning: passing argument 1 of 'initWithOptions:' makes integer from pointer without a cast [enabled by default] ULAnalyserPluginExtensions.m:135:6: note: expected 'NSPointerFunctionsOptions' but argument is of type 'id' ULAnalyserPluginExtensions.m: In function '-[ULAnalyser(ULAnalyserPluginExtensions) applyCurrentPlugin:]': ULAnalyserPluginExtensions.m:261:2: warning: statement with no effect [-Wunused-value] gcc ULAnalyserGnuplotExtensions.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULAnalyserGnuplotExtensions.m.o ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) setupGnuplotInterface]': ULAnalyserGnuplotExtensions.m:145:15: warning: unused variable 'ioManager' [-Wunused-variable] ULAnalyserGnuplotExtensions.m:144:17: warning: unused variable 'fileManager' [-Wunused-variable] ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) writeMatrixString:]': ULAnalyserGnuplotExtensions.m:290:16: warning: unused variable 'fileHandle' [-Wunused-variable] ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) _outputFileForMatrix:inDataSet:columnOrder:]': ULAnalyserGnuplotExtensions.m:333:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) createGnuplotFilesForDataSet:]': ULAnalyserGnuplotExtensions.m:370:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) removeGnuplotFilesForDataSet:]': ULAnalyserGnuplotExtensions.m:407:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) removeGnuplotFilesForDataSets:]': ULAnalyserGnuplotExtensions.m:418:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) textView:doCommandBySelector:]': ULAnalyserGnuplotExtensions.m:440:21: warning: unused variable 'errorString' [-Wunused-variable] ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) _previousStringFromHistory]': ULAnalyserGnuplotExtensions.m:258:2: warning: 'string' may be used uninitialized in this function [-Wuninitialized] ULAnalyserGnuplotExtensions.m: In function '-[ULAnalyser(ULAnalyserGnuplotExtensions) _nextStringFromHistory]': ULAnalyserGnuplotExtensions.m:280:2: warning: 'string' may be used uninitialized in this function [-Wuninitialized] gcc ULAnalyserDataSetView.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULAnalyserDataSetView.m.o ULAnalyserDataSetView.m: In function '-[ULAnalyserDataSetView init]': ULAnalyserDataSetView.m:9:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyserDataSetView.m:7:11: warning: unused variable 'error' [-Wunused-variable] ULAnalyserDataSetView.m: In function '-[ULAnalyserDataSetView awakeFromNib]': ULAnalyserDataSetView.m:58:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyserDataSetView.m: In function '-[ULAnalyserDataSetView orderedColumnHeaders]': ULAnalyserDataSetView.m:89:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULAnalyserDataSetView.m: In function '-[ULAnalyserDataSetView _displayCurrentDataSetTable]': ULAnalyserDataSetView.m:100:10: warning: unused variable 'range' [-Wunused-variable] ULAnalyserDataSetView.m:99:5: warning: unused variable 'subsystem' [-Wunused-variable] ULAnalyserDataSetView.m:98:55: warning: unused variable 'diff' [-Wunused-variable] ULAnalyserDataSetView.m: In function '-[ULAnalyserDataSetView displayData]': ULAnalyserDataSetView.m:181:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc ULProgressPanel.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULProgressPanel.m.o ULProgressPanel.m: In function '-[ULProgressPanel initWithTitle:message:progressInfo:]': ULProgressPanel.m:48:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULProgressPanel.m: In function '-[ULProgressPanel runProgressPanel:]': ULProgressPanel.m:128:11: warning: unused variable 'updateEvent' [-Wunused-variable] ULProgressPanel.m: In function '-[ULProgressPanel _incrementFromNotification:]': ULProgressPanel.m:216:14: warning: 'currentStep' may be used uninitialized in this function [-Wuninitialized] gcc ULExportPanel.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULExportPanel.m.o ULExportPanel.m: In function '-[ULExportPanel init]': ULExportPanel.m:43:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc ULTemplateViewController.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULTemplateViewController.m.o ULTemplateViewController.m: In function '-[ULTemplateViewController _clearSectionMenus]': ULTemplateViewController.m:38:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULTemplateViewController.m: In function '-[ULTemplateViewController _addComponentWithName:toSectionMenu:]': ULTemplateViewController.m:56:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULTemplateViewController.m: In function '-[ULTemplateViewController _updateTemplateView]': ULTemplateViewController.m:63:12: warning: variable 'holder' set but not used [-Wunused-but-set-variable] ULTemplateViewController.m: In function '-[ULTemplateViewController _updateTemplateWithMenuValues]': ULTemplateViewController.m:90:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULTemplateViewController.m:93:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULTemplateViewController.m: In function '-[ULTemplateViewController init]': ULTemplateViewController.m:123:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULTemplateViewController.m: In function '-[ULTemplateViewController _outlineViewSelectionDidChange:]': ULTemplateViewController.m:227:6: warning: 'NSXMLNode' may not respond to '-identifier' [enabled by default] ULTemplateViewController.m:227:6: warning: (Messages without a matching method signature [enabled by default] ULTemplateViewController.m:227:6: warning: will be assumed to return 'id' and accept [enabled by default] ULTemplateViewController.m:227:6: warning: '...' as arguments.) [enabled by default] ULTemplateViewController.m: In function '-[ULTemplateViewController awakeFromNib]': ULTemplateViewController.m:253:12: warning: unused variable 'description' [-Wunused-variable] ULTemplateViewController.m: In function '-[ULTemplateViewController displayTemplate:]': ULTemplateViewController.m:319:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULTemplateViewController.m:327:3: warning: suggest parentheses around assignment used as truth value [-Wparentheses] gcc ULConverter.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULConverter.m.o gcc ULExportController.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULExportController.m.o ULExportController.m: In function '-[ULExportController init]': ULExportController.m:52:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULExportController.m: In function '-[ULExportController _exportObjectAsBinaryArchive:toFile:]': ULExportController.m:122:6: warning: unused variable 'selectedRow' [-Wunused-variable] ULExportController.m: In function '-[ULExportController export:]': ULExportController.m:183:39: warning: variable 'extension' set but not used [-Wunused-but-set-variable] ULExportController.m:180:14: warning: unused variable 'index' [-Wunused-variable] ULExportController.m: In function '-[ULExportController exportObject:toFile:format:]': ULExportController.m:249:6: warning: unused variable 'selector' [-Wunused-variable] ULExportController.m: In function '-[ULExportController exportCurrentPasteboardObjectAs:]': ULExportController.m:327:35: warning: variable 'extension' set but not used [-Wunused-but-set-variable] ULExportController.m: In function '-[ULExportController(ChimeraAttributeFileCreation) _saveAttributeFile:]': ULExportController.m:423:11: warning: unused variable 'error' [-Wunused-variable] ULExportController.m: In function '-[ULExportController(ChimeraAttributeFileCreation) createAttributeFile:]': ULExportController.m:516:5: warning: unused variable 'attribute' [-Wunused-variable] ULExportController.m:514:16: warning: unused variable 'attributeEnum' [-Wunused-variable] ULExportController.m:512:49: warning: variable 'atomColName' set but not used [-Wunused-but-set-variable] ULExportController.m: In function '-[ULExportController exportObject:toFile:as:]': ULExportController.m:244:2: warning: 'format' may be used uninitialized in this function [-Wuninitialized] gcc ULPreferences.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULPreferences.m.o ULPreferences.m: In function '-[ULPreferences initWithModelViewController:]': ULPreferences.m:50:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULPreferences.m: In function '-[ULPreferences _convertStringToArray:]': ULPreferences.m:195:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] ULPreferences.m: In function '-[ULPreferences setDefault:]': ULPreferences.m:257:4: warning: 'domainName' may be used uninitialized in this function [-Wuninitialized] ULPreferences.m:247:2: warning: 'defaultName' may be used uninitialized in this function [-Wuninitialized] gcc ULDatabaseManager.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULDatabaseManager.m.o gcc ULInterfaceFunctions.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULInterfaceFunctions.m.o gcc ULOutlineViewAdditions.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/ULOutlineViewAdditions.m.o gcc main.m -c \ -MMD -MP -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -fPIC -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -g -O2 -fgnu-runtime -fconstant-string-class=NSConstantString -I/build/buildd/adun.app-0.81 -I/build/buildd/adun.app-0.81/Kernel -I/build/buildd/adun.app-0.81/Kernel/AdunKernel/Headers -I. -I/usr/local/include/GNUstep -I/usr/include/GNUstep \ -o obj/UL.obj/main.m.o gcc -rdynamic -Wl,-z,defs -Wl,--as-needed -Wl,-rpath,/usr/lib/adun.app -shared-libgcc -fexceptions -fgnu-runtime -o UL.app/./UL \ ./obj/UL.obj/ViewController.m.o ./obj/UL.obj/ULSimulationCreator.m.o ./obj/UL.obj/ULPasteboard.m.o ./obj/UL.obj/ULStatusTable.m.o ./obj/UL.obj/ULViewControllerSimulationCommands.m.o ./obj/UL.obj/ULPropertiesPanel.m.o ./obj/UL.obj/ULOutlineViewDelegate.m.o ./obj/UL.obj/ULSystemViewController.m.o ./obj/UL.obj/ULDatabaseBrowser.m.o ./obj/UL.obj/ULDatabaseBrowserDataDisplay.m.o ./obj/UL.obj/ULAnalyser.m.o ./obj/UL.obj/ULAnalyserPluginExtensions.m.o ./obj/UL.obj/ULAnalyserGnuplotExtensions.m.o ./obj/UL.obj/ULAnalyserDataSetView.m.o ./obj/UL.obj/ULProgressPanel.m.o ./obj/UL.obj/ULExportPanel.m.o ./obj/UL.obj/ULTemplateViewController.m.o ./obj/UL.obj/ULConverter.m.o ./obj/UL.obj/ULExportController.m.o ./obj/UL.obj/ULPreferences.m.o ./obj/UL.obj/ULDatabaseManager.m.o ./obj/UL.obj/ULInterfaceFunctions.m.o ./obj/UL.obj/ULOutlineViewAdditions.m.o ./obj/UL.obj/main.m.o -L/opt/intel/lib -L/usr/local/lib -L/build/buildd/adun.app-0.81/MolTalk/MolTalk.framework/Versions/Current -L/build/buildd/adun.app-0.81/Kernel/Base/obj -L/build/buildd/adun.app-0.81/Kernel/AdunKernel/AdunKernel.framework/Versions/Current -L./XMLLib/obj -L. -L./ULFramework/ULFramework.framework/Versions/Current -L/usr/local/lib -L/usr/lib -lXMLLib -lULFramework -lAdunKernel -lMolTalk -ladun_base -lgnustep-gui -lgnustep-base -lpthread -lobjc -lm /usr/share/GNUstep/Makefiles/mkinstalldirs UL.app/Resources echo "OLD_GNUSTEP_STAMP_ASTRING = _NSApplication---" > ./UL.app/stamp.make (echo "{"; echo ' NOTE = "Automatically generated, do not edit!";'; \ echo " NSExecutable = \"UL\";"; \ echo " NSMainNibFile = \"\";"; \ echo " GSMainMarkupFile = \"\";"; \ if [ "" != "" ]; then \ echo " NSIcon = \"\";"; \ fi; \ echo " NSPrincipalClass = \"NSApplication\";"; \ echo "}") >UL.app/Resources/Info-gnustep.plist if [ -r "ULInfo.plist" ]; then \ plmerge UL.app/Resources/Info-gnustep.plist "ULInfo.plist"; \ fi pl2link UL.app/Resources/Info-gnustep.plist ./UL.app/Resources/UL.desktop; \ chmod a+x ./UL.app/Resources/UL.desktop for f in Resources/UL.gorm Resources/Options.gorm Resources/System.gorm Resources/Converter.gorm Resources/ProgressPanel.gorm Resources/ExportPanel.gorm Resources/CreateAttributePanel.gorm Resources/Results.gorm Resources/Template.gorm Resources/Preferences.gorm Resources/DatabasePanel.gorm Resources/Info-gnustep.plist Resources/defaultOptions.plist Resources/H2O.pdb Resources/splash.tiff Resources/document-save.png Resources/dataset-close.png Resources/apply.png Resources/reload.png Resources/export.png Resources/icon.tiff Resources/QuickStartFiles; do \ if [ -f $f -o -d $f ]; then \ cp -fr $f ./UL.app/Resources/; \ else \ echo "Warning: $f not found - ignoring"; \ fi; \ done make[1]: Leaving directory `/build/buildd/adun.app-0.81/UL' convert UL/Resources/icon.tiff -resize 32x32 adun.xpm touch build-stamp /usr/bin/fakeroot debian/rules binary-arch dh_testdir dh_testroot dh_prep dh_installdirs usr/lib/adun.app /usr/bin/make install messages=yes DESTDIR=/build/buildd/adun.app-0.81/debian/adun.app \ GNUSTEP_SYSTEM_LIBRARIES=/usr/lib/adun.app \ GNUSTEP_INSTALLATION_DOMAIN=SYSTEM This is gnustep-make 2.6.0. Type 'make print-gnustep-make-help' for help. make[1]: Entering directory `/build/buildd/adun.app-0.81' Making all in Kernel/ ... make[2]: Entering directory `/build/buildd/adun.app-0.81/Kernel' Making all in Base ... make[3]: Entering directory `/build/buildd/adun.app-0.81/Kernel/Base' Making all for library libadun_base... make[6]: Nothing to be done for `internal-library-compile'. make[3]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/Base' Making all in AdunKernel ... make[3]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel' Making build-headers in subprojects of framework AdunKernel... make[4]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' Making build-headers for subproject Framework... make[5]: Nothing to be done for `internal-subproject-build-headers'. make[4]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' make[4]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making build-headers in subprojects of subproject CoreAdditions... make[5]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making build-headers for subproject CoreCommands... make[6]: Nothing to be done for `internal-subproject-build-headers'. make[5]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making build-headers for subproject CoreAdditions... make[5]: Nothing to be done for `internal-subproject-build-headers'. make[4]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making build-headers for framework AdunKernel... cd ./AdunKernel.framework; \ if [ ! -h "Resources" ]; then \ rm -f Resources; \ ln -s Versions/Current/Resources Resources; \ fi; \ if [ ! -h "Headers" ]; then \ rm -f Headers; \ ln -s Versions/Current/Headers Headers; \ fi cd ./derived_src; \ if [ ! -h "AdunKernel" ]; then \ rm -f ./AdunKernel; \ ln -s ../AdunKernel.framework/Headers \ ./AdunKernel; \ fi Making all in subprojects of framework AdunKernel... make[4]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' Making all for subproject Framework... make[6]: Nothing to be done for `internal-subproject-compile'. make[4]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' make[4]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making all in subprojects of subproject CoreAdditions... make[5]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making all for subproject CoreCommands... make[7]: Nothing to be done for `internal-subproject-compile'. make[5]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making all for subproject CoreAdditions... make[6]: Nothing to be done for `internal-subproject-compile'. make[4]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making all for framework AdunKernel... make[5]: Nothing to be done for `internal-framework-compile'. for f in Resources/ScriptingInfo.plist Resources/GBSWData/; do \ if [ -f $f -o -d $f ]; then \ cp -fr $f ./AdunKernel.framework/Versions/0/Resources/; \ else \ echo "Warning: $f not found - ignoring"; \ fi; \ done for subproject in Framework/ CoreAdditions/; do \ if [ -d $subproject/Resources/Subproject ]; then \ for f in $subproject/Resources/Subproject/*; do \ if [ $f != $subproject'/Resources/Subproject/*' ]; then \ cp -fr $f ./AdunKernel.framework/Versions/0/Resources/; \ fi; \ done; \ fi; \ done make[3]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel' Making all for tool AdunCore... make[5]: Nothing to be done for `internal-tool-compile'. make[2]: Leaving directory `/build/buildd/adun.app-0.81/Kernel' Making all in MolTalk/ ... make[2]: Entering directory `/build/buildd/adun.app-0.81/MolTalk' Making build-headers for framework MolTalk... cd ./MolTalk.framework; \ if [ ! -h "Resources" ]; then \ rm -f Resources; \ ln -s Versions/Current/Resources Resources; \ fi; \ if [ ! -h "Headers" ]; then \ rm -f Headers; \ ln -s Versions/Current/Headers Headers; \ fi cd ./derived_src; \ if [ ! -h "MolTalk" ]; then \ rm -f ./MolTalk; \ ln -s ../MolTalk.framework/Headers \ ./MolTalk; \ fi Making all for framework MolTalk... make[4]: Nothing to be done for `internal-framework-compile'. for f in Resources/ScriptingInfo.plist; do \ if [ -f $f -o -d $f ]; then \ cp -fr $f ./MolTalk.framework/Versions/3/Resources/; \ else \ echo "Warning: $f not found - ignoring"; \ fi; \ done make[2]: Leaving directory `/build/buildd/adun.app-0.81/MolTalk' Making all in UL/ ... make[2]: Entering directory `/build/buildd/adun.app-0.81/UL' Making all in XMLLib ... make[3]: Entering directory `/build/buildd/adun.app-0.81/UL/XMLLib' Making all for library libXMLLib... make[6]: Nothing to be done for `internal-library-compile'. make[3]: Leaving directory `/build/buildd/adun.app-0.81/UL/XMLLib' Making all in ULFramework ... make[3]: Entering directory `/build/buildd/adun.app-0.81/UL/ULFramework' Making build-headers for framework ULFramework... cd ./ULFramework.framework; \ if [ ! -h "Resources" ]; then \ rm -f Resources; \ ln -s Versions/Current/Resources Resources; \ fi; \ if [ ! -h "Headers" ]; then \ rm -f Headers; \ ln -s Versions/Current/Headers Headers; \ fi cd ./derived_src; \ if [ ! -h "ULFramework" ]; then \ rm -f ./ULFramework; \ ln -s ../ULFramework.framework/Headers \ ./ULFramework; \ fi Making all for framework ULFramework... make[5]: Nothing to be done for `internal-framework-compile'. for f in Resources/ScriptingInfo.plist Resources/objectTemplates.plist Resources/pdbBuilderOptions.plist Resources/pdbNameMap.plist Resources/iupacPdbMap.plist Resources/Version Resources/ForceFields; do \ if [ -f $f -o -d $f ]; then \ cp -fr $f ./ULFramework.framework/Versions/0/Resources/; \ else \ echo "Warning: $f not found - ignoring"; \ fi; \ done make[3]: Leaving directory `/build/buildd/adun.app-0.81/UL/ULFramework' Making all in AdunServer ... make[3]: Entering directory `/build/buildd/adun.app-0.81/UL/AdunServer' Making all for tool AdunServer... make[6]: Nothing to be done for `internal-tool-compile'. make[3]: Leaving directory `/build/buildd/adun.app-0.81/UL/AdunServer' Making all for app UL... make[5]: Nothing to be done for `internal-app-compile'. for f in Resources/UL.gorm Resources/Options.gorm Resources/System.gorm Resources/Converter.gorm Resources/ProgressPanel.gorm Resources/ExportPanel.gorm Resources/CreateAttributePanel.gorm Resources/Results.gorm Resources/Template.gorm Resources/Preferences.gorm Resources/DatabasePanel.gorm Resources/Info-gnustep.plist Resources/defaultOptions.plist Resources/H2O.pdb Resources/splash.tiff Resources/document-save.png Resources/dataset-close.png Resources/apply.png Resources/reload.png Resources/export.png Resources/icon.tiff Resources/QuickStartFiles; do \ if [ -f $f -o -d $f ]; then \ cp -fr $f ./UL.app/Resources/; \ else \ echo "Warning: $f not found - ignoring"; \ fi; \ done make[2]: Leaving directory `/build/buildd/adun.app-0.81/UL' Making install in Kernel/ ... make[2]: Entering directory `/build/buildd/adun.app-0.81/Kernel' Making install in Base ... make[3]: Entering directory `/build/buildd/adun.app-0.81/Kernel/Base' Making install for library libadun_base... if [ -f ./obj/libadun_base.so.0.0.1 ]; then \ /usr/bin/install -c -p ./obj/libadun_base.so.0.0.1 \ /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. ; \ (cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/.; rm -f libadun_base.so; if [ "libadun_base.so.0" != "libadun_base.so.0.0.1" ]; then rm -f libadun_base.so.0; ln -s libadun_base.so.0.0.1 libadun_base.so.0; fi; ln -s libadun_base.so.0 libadun_base.so; ) \ fi /usr/share/GNUstep/Makefiles/mkinstalldirs /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep//Base for file in AdForceFieldFunctions.h AdGeneralizedBornFunctions.h AdMatrix.h AdQuaternion.h AdSorter.h AdVector.h AdQuadratureFunctions.h AdVolumeFunctions.h AdBaseFunctions.h AdLinkedList.h __done; do \ if [ $file != __done ]; then \ /usr/bin/install -c -p -m 644 ./$file \ /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep//Base/$file; \ fi; \ done make[3]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/Base' Making install in AdunKernel ... make[3]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel' /usr/share/GNUstep/Makefiles/mkinstalldirs /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep/Framework/Protocols Making install in subprojects of framework AdunKernel... make[4]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' Making install for subproject Framework... make[5]: Nothing to be done for `internal-subproject-install'. make[4]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/Framework' make[4]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making install in subprojects of subproject CoreAdditions... make[5]: Entering directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making install for subproject CoreCommands... make[6]: Nothing to be done for `internal-subproject-install'. make[5]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions/Commands' Making install for subproject CoreAdditions... make[5]: Nothing to be done for `internal-subproject-install'. make[4]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel/CoreAdditions' Making install for framework AdunKernel... /usr/share/GNUstep/Makefiles/mkinstalldirs /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks rm -rf /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/AdunKernel.framework; \ (cd .; tar cfX - /usr/share/GNUstep/Makefiles/tar-exclude-list AdunKernel.framework) | (cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks; tar xf -) cd /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep; \ rm -f AdunKernel; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/AdunKernel.framework/Headers short` AdunKernel; \ cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/.; \ rm -f libAdunKernel.so; \ rm -f libAdunKernel.so.0; \ rm -f libAdunKernel.so.0.13; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/Current/./libAdunKernel.so short` libAdunKernel.so; \ if test -r "/build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/Current/./libAdunKernel.so.0"; then \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/Current/./libAdunKernel.so.0 short` libAdunKernel.so.0; \ fi; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/Current/./libAdunKernel.so.0.13 short` libAdunKernel.so.0.13 make[3]: Leaving directory `/build/buildd/adun.app-0.81/Kernel/AdunKernel' Making install for tool AdunCore... /usr/share/GNUstep/Makefiles/mkinstalldirs /build/buildd/adun.app-0.81/debian/adun.app//usr/bin/. /usr/bin/install -c -p -m 0755 \ ./obj/AdunCore \ /build/buildd/adun.app-0.81/debian/adun.app//usr/bin/. /usr/share/GNUstep/Makefiles/mkinstalldirs /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Tools/Resources rm -rf /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Tools/Resources/AdunCore; \ (cd ./Resources; \ tar chfX - /usr/share/GNUstep/Makefiles/tar-exclude-list AdunCore) \ | (cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Tools/Resources; tar xf -) make[2]: Leaving directory `/build/buildd/adun.app-0.81/Kernel' Making install in MolTalk/ ... make[2]: Entering directory `/build/buildd/adun.app-0.81/MolTalk' Making install for framework MolTalk... rm -rf /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/MolTalk.framework; \ (cd .; tar cfX - /usr/share/GNUstep/Makefiles/tar-exclude-list MolTalk.framework) | (cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks; tar xf -) cd /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep; \ rm -f MolTalk; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/MolTalk.framework/Headers short` MolTalk; \ cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/.; \ rm -f libMolTalk.so; \ rm -f libMolTalk.so.3; \ rm -f libMolTalk.so.3.0.1; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/Current/./libMolTalk.so short` libMolTalk.so; \ if test -r "/build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/Current/./libMolTalk.so.3"; then \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/Current/./libMolTalk.so.3 short` libMolTalk.so.3; \ fi; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/Current/./libMolTalk.so.3.0.1 short` libMolTalk.so.3.0.1 make[2]: Leaving directory `/build/buildd/adun.app-0.81/MolTalk' Making install in UL/ ... make[2]: Entering directory `/build/buildd/adun.app-0.81/UL' Making install in XMLLib ... make[3]: Entering directory `/build/buildd/adun.app-0.81/UL/XMLLib' Making install for library libXMLLib... if [ -f ./obj/libXMLLib.so.0.1 ]; then \ /usr/bin/install -c -p ./obj/libXMLLib.so.0.1 \ /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. ; \ (cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/.; rm -f libXMLLib.so; if [ "libXMLLib.so.0" != "libXMLLib.so.0.1" ]; then rm -f libXMLLib.so.0; ln -s libXMLLib.so.0.1 libXMLLib.so.0; fi; ln -s libXMLLib.so.0 libXMLLib.so; ) \ fi /usr/share/GNUstep/Makefiles/mkinstalldirs /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep//XMLLib for file in XMLDocumentRoot.h XMLNode.h XMLLib.h ULParameterNode.h ULTopologyNode.h ULClassNode.h ULInteractionNode.h ULParameterTree.h ULMolecularLibraryNode.h ULMoleculeClassNode.h ULMoleculeNode.h ULConnectivityNode.h ULAtomListNode.h ULMolecularLibraryTree.h __done; do \ if [ $file != __done ]; then \ /usr/bin/install -c -p -m 644 ./$file \ /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep//XMLLib/$file; \ fi; \ done make[3]: Leaving directory `/build/buildd/adun.app-0.81/UL/XMLLib' Making install in ULFramework ... make[3]: Entering directory `/build/buildd/adun.app-0.81/UL/ULFramework' Making install for framework ULFramework... rm -rf /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/ULFramework.framework; \ (cd .; tar cfX - /usr/share/GNUstep/Makefiles/tar-exclude-list ULFramework.framework) | (cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks; tar xf -) cd /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep; \ rm -f ULFramework; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/include/GNUstep /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/ULFramework.framework/Headers short` ULFramework; \ cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/.; \ rm -f libULFramework.so; \ rm -f libULFramework.so.0; \ rm -f libULFramework.so.0.6; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/Current/./libULFramework.so short` libULFramework.so; \ if test -r "/build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/Current/./libULFramework.so.0"; then \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/Current/./libULFramework.so.0 short` libULFramework.so.0; \ fi; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/adun.app/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/Current/./libULFramework.so.0.6 short` libULFramework.so.0.6 make[3]: Leaving directory `/build/buildd/adun.app-0.81/UL/ULFramework' Making install in AdunServer ... make[3]: Entering directory `/build/buildd/adun.app-0.81/UL/AdunServer' Making install for tool AdunServer... /usr/bin/install -c -p -m 0755 \ ./obj/AdunServer \ /build/buildd/adun.app-0.81/debian/adun.app//usr/bin/. make[3]: Leaving directory `/build/buildd/adun.app-0.81/UL/AdunServer' Making install for app UL... /usr/share/GNUstep/Makefiles/mkinstalldirs /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Applications rm -rf /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Applications/UL.app; \ (cd ./.; \ tar chfX - /usr/share/GNUstep/Makefiles/tar-exclude-list UL.app) \ | (cd /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Applications; tar xf -) \ cd /build/buildd/adun.app-0.81/debian/adun.app//usr/bin/.; \ rm -f UL; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh /build/buildd/adun.app-0.81/debian/adun.app//usr/bin/. /build/buildd/adun.app-0.81/debian/adun.app//usr/lib/GNUstep/Applications/UL.app/./UL short` \ UL make[2]: Leaving directory `/build/buildd/adun.app-0.81/UL' make[1]: Leaving directory `/build/buildd/adun.app-0.81' find /build/buildd/adun.app-0.81/debian/adun.app/usr/lib/GNUstep/Applications/UL.app/Resources \ -type f -exec chmod -x '{}' \; chmod -x /build/buildd/adun.app-0.81/debian/adun.app/usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/0/Resources/ForceFields/Enzymix/*.ffml rm -r /build/buildd/adun.app-0.81/debian/adun.app/usr/include/GNUstep/Framework \ /build/buildd/adun.app-0.81/debian/adun.app/usr/lib/GNUstep/Tools rm /build/buildd/adun.app-0.81/debian/adun.app/usr/lib/GNUstep/Applications/*.app/Resources/*.desktop install -D -m 644 debian/*.desktop \ /build/buildd/adun.app-0.81/debian/adun.app/usr/share/applications/UL.desktop dh_install adun.xpm usr/share/pixmaps/ dh_testdir dh_testroot dh_installchangelogs dh_installdocs dh_installmenu dh_installman dh_link gsdh_gnustep dh_installdirs usr/share/GNUstep mv /build/buildd/adun.app-0.81/debian/adun.app/usr/lib/GNUstep/Applications/UL.app/Resources \ /build/buildd/adun.app-0.81/debian/adun.app/usr/share/GNUstep/UL.app dh_link usr/share/GNUstep/UL.app \ /usr/lib/GNUstep/Applications/UL.app/Resources dh_strip dh_strip debug symbol extraction: all non-arch-all packages for this build platform armel: adun.app dh_strip debug symbol extraction: packages to act on: adun.app dh_strip debug symbol extraction: ignored packages: dpkg-deb: building package `adun.app-dbgsym' in `../adun.app-dbgsym_0.81-5_armel.ddeb'. dh_compress dh_fixperms dh_installdeb dh_shlibdeps dpkg-shlibdeps: warning: debian/adun.app/usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/libAdunKernel.so.0.13 contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/adun.app/usr/lib/GNUstep/Applications/UL.app/UL contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/adun.app/usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/0/libULFramework.so.0.6 contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/adun.app/usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/3/libMolTalk.so.3.0.1 contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: dependency on libgslcblas.so.0 could be avoided if "debian/adun.app/usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/libAdunKernel.so.0.13" were not uselessly linked against it (they use none of its symbols). dh_gencontrol dh_md5sums dh_builddeb INFO: pkgstriptranslations version 101 pkgstriptranslations: processing control file: ./debian/adun.app/DEBIAN/control, package adun.app, directory ./debian/adun.app ./debian/adun.app/usr/share/applications/UL.desktop: does not have gettext domain, not stripping pkgstriptranslations: adun.app does not contain translations, skipping pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/adun.app/DEBIAN/control, package adun.app, directory debian/adun.app OptiPNG 0.6.4: Advanced PNG optimizer. Copyright (C) 2001-2010 Cosmin Truta. ** Processing: ./usr/share/GNUstep/UL.app/reload.png 32x32 pixels, 4x8 bits/pixel, RGB+alpha Input IDAT size = 1951 bytes Input file size = 2024 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 1937 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 1924 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 1924 Output IDAT size = 1924 bytes (27 bytes decrease) Output file size = 1997 bytes (27 bytes = 1.33% decrease) 1997 1997 100% ./usr/share/GNUstep/UL.app/reload.png (Bigger 2010) 1997 1997 100% OptiPNG 0.6.4: Advanced PNG optimizer. Copyright (C) 2001-2010 Cosmin Truta. ** Processing: ./usr/share/GNUstep/UL.app/apply.png 32x32 pixels, 4x8 bits/pixel, RGB+alpha Input IDAT size = 1146 bytes Input file size = 1219 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 1136 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 1127 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 1127 Output IDAT size = 1127 bytes (19 bytes decrease) Output file size = 1200 bytes (19 bytes = 1.56% decrease) 1200 1200 100% ./usr/share/GNUstep/UL.app/apply.png (Bigger 1304) 1200 1200 100% OptiPNG 0.6.4: Advanced PNG optimizer. Copyright (C) 2001-2010 Cosmin Truta. ** Processing: ./usr/share/GNUstep/UL.app/dataset-close.png 32x32 pixels, 4x8 bits/pixel, RGB+alpha Input IDAT size = 1052 bytes Input file size = 1194 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 1046 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 1046 Output IDAT size = 1046 bytes (6 bytes decrease) Output file size = 1188 bytes (6 bytes = 0.50% decrease) 1188 1188 100% ./usr/share/GNUstep/UL.app/dataset-close.png (Bigger 1227) 1188 1188 100% OptiPNG 0.6.4: Advanced PNG optimizer. Copyright (C) 2001-2010 Cosmin Truta. ** Processing: ./usr/share/GNUstep/UL.app/export.png 32x32 pixels, 4x8 bits/pixel, RGB+alpha Input IDAT size = 1120 bytes Input file size = 1193 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 1108 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 1108 Output IDAT size = 1108 bytes (12 bytes decrease) Output file size = 1181 bytes (12 bytes = 1.01% decrease) 1181 1181 100% ./usr/share/GNUstep/UL.app/export.png (Bigger 1236) 1181 1181 100% OptiPNG 0.6.4: Advanced PNG optimizer. Copyright (C) 2001-2010 Cosmin Truta. ** Processing: ./usr/share/GNUstep/UL.app/document-save.png 32x32 pixels, 4x8 bits/pixel, RGB+alpha Input IDAT size = 1898 bytes Input file size = 1971 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 1830 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 1782 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 1782 Output IDAT size = 1782 bytes (116 bytes decrease) Output file size = 1855 bytes (116 bytes = 5.89% decrease) 1855 1855 100% ./usr/share/GNUstep/UL.app/document-save.png (Bigger 1878) 1855 1855 100% dpkg-deb: warning: 'debian/adun.app/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `adun.app' in `../adun.app_0.81-5_armel.deb'. dpkg-genchanges -B -mUbuntu/armel Build Daemon >../adun.app_0.81-5_armel.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build adun.app-0.81 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20110708-0021 Publishing debug debs. chroot-autobuild/build/buildd/adun.app_0.81-5_armel.deb: new debian package, version 2.0. size 1460136 bytes: control archive= 7802 bytes. 919 bytes, 16 lines control 24033 bytes, 236 lines md5sums 185 bytes, 7 lines * postinst #!/bin/sh 160 bytes, 5 lines * postrm #!/bin/sh Package: adun.app Version: 0.81-5 Architecture: armel Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 7136 Depends: gnustep-back0.20 (>= 0.20.0), gnustep-base-runtime (>= 1.22.0), gnustep-gpbs (>= 0.20.0), gnustep-gui-runtime (>= 0.20.0), libc6 (>= 2.4), libgcc1 (>= 1:4.4.0), libgnustep-base1.22 (>= 1.22.0), libgnustep-gui0.20 (>= 0.20.0), libgsl0ldbl (>= 1.9), libobjc3 (>= 4.2.1), gnustep-fslayout-fhs Recommends: gnuplot Section: gnustep Priority: optional Homepage: http://diana.imim.es/Adun Description: Molecular Simulator for GNUstep Adun is a biomolecular simulator that also includes data management and analysis capabilities. It was developed at the Computational Biophysics and Biochemistry Laboratory, a part of the Research Unit on Biomedical Informatics of the UPF. chroot-autobuild/build/buildd/adun.app_0.81-5_armel.deb: drwxr-xr-x root/root 0 2011-07-08 00:19 ./ drwxr-xr-x root/root 0 2011-07-08 00:19 ./usr/ drwxr-xr-x root/root 0 2011-07-08 00:19 ./usr/include/ drwxr-xr-x root/root 0 2011-07-08 00:19 ./usr/include/GNUstep/ drwxr-xr-x root/root 0 2011-07-08 00:19 ./usr/include/GNUstep/Frameworks/ drwxr-xr-x root/root 0 2011-07-08 00:19 ./usr/include/GNUstep/Frameworks/ULFramework.framework/ drwxr-xr-x root/root 0 2011-07-08 00:19 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/ drwxr-xr-x root/root 0 2011-07-08 00:13 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ -rw-r--r-- root/root 6163 2008-04-06 13:44 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULDatabaseIndex.h -rw-r--r-- root/root 4007 2008-09-29 15:42 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULFrameworkDefinitions.h -rw-r--r-- root/root 13864 2008-04-06 13:49 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULFileSystemDatabaseBackend.h -rw-r--r-- root/root 4253 2008-12-11 17:04 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULProcessManager.h -rw-r--r-- root/root 2332 2007-06-13 12:34 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULTopologyFrameBuilder.h -rw-r--r-- root/root 1361 2006-12-21 14:52 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULMerger.h -rw-r--r-- root/root 1502 2007-06-22 14:59 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULFramework.h -rw-r--r-- root/root 1310 2006-09-29 08:41 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULSystem.h -rw-r--r-- root/root 13051 2008-04-06 13:51 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULDatabaseInterface.h -rw-r--r-- root/root 4556 2008-12-11 17:15 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULServerManager.h -rw-r--r-- root/root 1366 2007-03-16 13:08 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULDatabaseSimulationIndex.h -rw-r--r-- root/root 5332 2008-06-28 11:12 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULFrameworkFunctions.h -rw-r--r-- root/root 3376 2007-09-05 17:03 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULSystemController.h -rw-r--r-- root/root 4437 2008-10-13 15:45 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/PDBConfigurationBuilder.h -rw-r--r-- root/root 1301 2007-03-26 10:17 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULConfigurationPlugin.h -rw-r--r-- root/root 3901 2007-09-05 14:05 ./usr/include/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULAnalysisPlugin.h -rw-r--r-- root/root 3553 2008-10-13 15:36 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-> Versions/3 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/include/GNUstep/AdunKernel -> ../../lib/GNUstep/Frameworks/AdunKernel.framework/Headers lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/include/GNUstep/ULFramework -> ../../lib/GNUstep/Frameworks/ULFramework.framework/Headers lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/share/GNUstep/Frameworks/ULFramework.framework/Resources -> Versions/0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/share/GNUstep/Frameworks/AdunKernel.framework/Resources -> Versions/0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/share/GNUstep/Frameworks/MolTalk.framework/Resources -> Versions/3 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/Resources -> Versions/Current/Resources lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/libULFramework.so -> Versions/Current/libULFramework.so lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/Current -> 0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/0/Resources -> ../../../../../../share/GNUstep/Frameworks/ULFramework.framework/Versions/0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/0/libULFramework.so -> libULFramework.so.0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/0/libULFramework.so.0 -> libULFramework.so.0.6 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/0/Headers -> ../../../../../../include/GNUstep/Frameworks/ULFramework.framework/Versions/0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/0/ULFramework -> libULFramework.so lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/Headers -> Versions/Current/Headers lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/ULFramework.framework/ULFramework -> Versions/Current/ULFramework lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/AdunKernel.framework/Resources -> Versions/Current/Resources lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/Current -> 0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/Resources -> ../../../../../../share/GNUstep/Frameworks/AdunKernel.framework/Versions/0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/libAdunKernel.so.0 -> libAdunKernel.so.0.13 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/Headers -> ../../../../../../include/GNUstep/Frameworks/AdunKernel.framework/Versions/0 lrwxrwxrwx root/root 0 2011-07-08 00:19 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libMolTalk.so lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/3/Resources -> ../../../../../../share/GNUstep/Frameworks/MolTalk.framework/Versions/3 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/3/Headers -> ../../../../../../include/GNUstep/Frameworks/MolTalk.framework/Versions/3 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/3/libMolTalk.so -> libMolTalk.so.3 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/3/libMolTalk.so.3 -> libMolTalk.so.3.0.1 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/Current -> 3 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/MolTalk.framework/Headers -> Versions/Current/Headers lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Frameworks/MolTalk.framework/libMolTalk.so -> Versions/Current/libMolTalk.so lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/GNUstep/Applications/UL.app/Resources -> ../../../../share/GNUstep/UL.app lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libXMLLib.so -> libXMLLib.so.0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libXMLLib.so.0 -> libXMLLib.so.0.1 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libULFramework.so.0.6 -> ../GNUstep/Frameworks/ULFramework.framework/Versions/Current/libULFramework.so.0.6 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libULFramework.so -> ../GNUstep/Frameworks/ULFramework.framework/Versions/Current/libULFramework.so lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libadun_base.so.0 -> libadun_base.so.0.0.1 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libULFramework.so.0 -> ../GNUstep/Frameworks/ULFramework.framework/Versions/Current/libULFramework.so.0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libMolTalk.so.3.0.1 -> ../GNUstep/Frameworks/MolTalk.framework/Versions/Current/libMolTalk.so.3.0.1 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libAdunKernel.so.0.13 -> ../GNUstep/Frameworks/AdunKernel.framework/Versions/Current/libAdunKernel.so.0.13 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libadun_base.so -> libadun_base.so.0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libAdunKernel.so.0 -> ../GNUstep/Frameworks/AdunKernel.framework/Versions/Current/libAdunKernel.so.0 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libAdunKernel.so -> ../GNUstep/Frameworks/AdunKernel.framework/Versions/Current/libAdunKernel.so lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libMolTalk.so -> ../GNUstep/Frameworks/MolTalk.framework/Versions/Current/libMolTalk.so lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/lib/adun.app/libMolTalk.so.3 -> ../GNUstep/Frameworks/MolTalk.framework/Versions/Current/libMolTalk.so.3 lrwxrwxrwx root/root 0 2011-07-08 00:19 ./usr/bin/UL -> ../lib/GNUstep/Applications/UL.app/UL adun.app_0.81-5_armel.changes: Format: 1.8 Date: Tue, 28 Jun 2011 10:38:55 +0200 Source: adun.app Binary: adun.app Architecture: armel Version: 0.81-5 Distribution: oneiric Urgency: low Maintainer: Ubuntu/armel Build Daemon Changed-By: Andreas Tille Description: adun.app - Molecular Simulator for GNUstep Closes: 631641 Changes: adun.app (0.81-5) unstable; urgency=low . * Use quilt instead of dpatch * Apply patch provided by Andreas Moog (Thanks to Andreas) to fix a build failure Closes: 631641 (LP: 771041) * Standards-Version: 3.9.2 (no changes needed) * Debhelper 8 (control+compat) * Corrected Vcs-URLs Checksums-Sha1: f29714a8722c0bed7d74b8d2019f5c4614f1635a 1460136 adun.app_0.81-5_armel.deb Checksums-Sha256: 15e4179be7527076d3c6025ccbee8aeec9322ac25c509fb4795d4952ab7b64e9 1460136 adun.app_0.81-5_armel.deb Files: c54b4607fe79ac39e81375e0144b65da 1460136 gnustep optional adun.app_0.81-5_armel.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/adun.app-0.81 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge libmagickwand3 groff-base libavahi-common3 libx11-data fontconfig-config ttf-dejavu-core gettext file autotools-dev libgnustep-base1.22 gobjc libvorbis0a libcroco3 libvorbisenc2 libfreetype6 libjpeg62 python2.7 libxcb1 libflac8 libsndfile1 libjasper1 diffstat html2text gnustep-make libao-common libfontconfig1 debhelper sgml-base libxslt1.1 libmagic1 libtiff4 libexpat1 gnustep-common bsdmainutils libxau6 libx11-6 mime-support libgif4 gnustep-gui-common libogg0 libxdmcp6 libicu44 po-debconf gnustep-base-runtime quilt imagemagick libmagickcore3 liblqr-1-0 libgsl0-dev libxml2 liblcms1 libao4 man-db gobjc-4.6 intltool-debian libavahi-client3 libgnustep-gui-dev libpython2.7 xml-core gnustep-base-common libcups2 libobjc3 ucf gnustep-gui-runtime libaspell15 libflite1 gettext-base libunistring0 libavahi-common-data libxext6 libgnustep-gui0.20 libpipeline1 libasound2 libltdl7 libsqlite3-0 libgsl0ldbl libgnustep-base-dev (Reading database ... 18475 files and directories currently installed.) Removing debhelper ... Removing po-debconf ... Removing quilt ... Purging configuration files for quilt ... Removing imagemagick ... Purging configuration files for imagemagick ... Removing libgsl0-dev ... Removing man-db ... Purging configuration files for man-db ... Removing catpages as well as /var/cache/man hierarchy. Removing intltool-debian ... Removing libgnustep-gui-dev ... Removing gnustep-gui-runtime ... Removing libaspell15 ... Purging configuration files for libaspell15 ... Removing libflite1 ... Purging configuration files for libflite1 ... Removing libgnustep-gui0.20 ... Purging configuration files for libgnustep-gui0.20 ... Removing libpipeline1 ... Purging configuration files for libpipeline1 ... Removing libasound2 ... Purging configuration files for libasound2 ... Removing libgsl0ldbl ... Purging configuration files for libgsl0ldbl ... Removing libgnustep-base-dev ... Removing libmagickwand3 ... Purging configuration files for libmagickwand3 ... Removing groff-base ... Purging configuration files for groff-base ... Removing gettext ... Removing file ... Removing gobjc ... Removing libcroco3 ... Purging configuration files for libcroco3 ... Removing libsndfile1 ... Purging configuration files for libsndfile1 ... Removing diffstat ... Removing html2text ... Purging configuration files for html2text ... Removing gnustep-make ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing libgif4 ... Purging configuration files for libgif4 ... Removing gnustep-gui-common ... Removing gnustep-base-runtime ... Purging configuration files for gnustep-base-runtime ... Removing libmagickcore3 ... Purging configuration files for libmagickcore3 ... Removing liblqr-1-0 ... Purging configuration files for liblqr-1-0 ... Removing liblcms1 ... Purging configuration files for liblcms1 ... Removing libao4 ... Purging configuration files for libao4 ... Removing gobjc-4.6 ... Removing libpython2.7 ... Purging configuration files for libpython2.7 ... Removing libcups2 ... Purging configuration files for libcups2 ... Removing gettext-base ... Removing libunistring0 ... Purging configuration files for libunistring0 ... Removing libxext6 ... Purging configuration files for libxext6 ... Removing libltdl7 ... Purging configuration files for libltdl7 ... Removing libgnustep-base1.22 ... Purging configuration files for libgnustep-base1.22 ... Removing libvorbisenc2 ... Purging configuration files for libvorbisenc2 ... Removing python2.7 ... Purging configuration files for python2.7 ... Removing libflac8 ... Purging configuration files for libflac8 ... Removing libjasper1 ... Purging configuration files for libjasper1 ... Removing libao-common ... Purging configuration files for libao-common ... Removing libfontconfig1 ... Purging configuration files for libfontconfig1 ... Removing libxslt1.1 ... Purging configuration files for libxslt1.1 ... Removing libtiff4 ... Purging configuration files for libtiff4 ... Removing libexpat1 ... Purging configuration files for libexpat1 ... Removing libx11-6 ... Purging configuration files for libx11-6 ... Removing mime-support ... Purging configuration files for mime-support ... Removing libicu44 ... Purging configuration files for libicu44 ... Removing libxml2 ... Purging configuration files for libxml2 ... Removing libavahi-client3 ... Purging configuration files for libavahi-client3 ... Removing gnustep-base-common ... Purging configuration files for gnustep-base-common ... Removing libobjc3 ... Purging configuration files for libobjc3 ... Removing libsqlite3-0 ... Purging configuration files for libsqlite3-0 ... Removing libavahi-common3 ... Purging configuration files for libavahi-common3 ... Removing libx11-data ... Removing fontconfig-config ... Purging configuration files for fontconfig-config ... Removing ttf-dejavu-core ... Removing libvorbis0a ... Purging configuration files for libvorbis0a ... Removing libfreetype6 ... Purging configuration files for libfreetype6 ... Removing libjpeg62 ... Removing libxcb1 ... Purging configuration files for libxcb1 ... Removing gnustep-common ... Purging configuration files for gnustep-common ... Removing libxau6 ... Purging configuration files for libxau6 ... Removing libogg0 ... Purging configuration files for libogg0 ... Removing libxdmcp6 ... Purging configuration files for libxdmcp6 ... Removing xml-core ... Purging configuration files for xml-core ... dpkg: warning: while removing xml-core, directory '/etc/sgml' not empty so not removed. Removing ucf ... Purging configuration files for ucf ... Removing libavahi-common-data ... Removing autotools-dev ... Removing sgml-base ... Purging configuration files for sgml-base ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20110708-0021 Build needed 00:16:29, 47848k disk space Can't open average time db /var/debbuild/avg-build-times Can't open average space db /var/debbuild/avg-build-space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', 'eb83739effc7db2296a477039ce75eb97e3af0d4'] Scanning for processes to kill in build /home/buildd/build-eb83739effc7db2296a477039ce75eb97e3af0d4/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'eb83739effc7db2296a477039ce75eb97e3af0d4'] Unmounting chroot for build eb83739effc7db2296a477039ce75eb97e3af0d4... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'eb83739effc7db2296a477039ce75eb97e3af0d4'] Removing build eb83739effc7db2296a477039ce75eb97e3af0d4