alien-hunter 1.7-7 source package in Ubuntu


alien-hunter (1.7-7) unstable; urgency=medium

  [ Steffen Moeller ]
  * d/u/metadata
    - Added RRIDs
    - yamllint clean

  [ Andreas Tille ]
  * debhelper 11
  * Point Vcs fields to
  * Standards-Version: 4.2.1
  * Secure URI in copyright format

 -- Andreas Tille <email address hidden>  Fri, 19 Oct 2018 12:03:40 +0200

Upload details

Uploaded by:
Debian Med on 2018-10-19
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release on 2019-10-18 universe science
Eoan release on 2019-04-18 universe science
Disco release on 2018-11-09 universe science


Disco: [FULLYBUILT] amd64


File Size SHA-256 Checksum
alien-hunter_1.7-7.dsc 2.0 KiB eb198b70b665aadf56efc54d73984026ad6b811f8f2f8748eb0ead90e9dbc3a9
alien-hunter_1.7.orig.tar.gz 25.5 KiB fae4d3f31166e69acc7119c37a34b69ca6aad9a981c454c42d3c0773456e783f
alien-hunter_1.7-7.debian.tar.xz 5.0 KiB 1383199ceeb8c1a9a1c893a630475408901ce7483b82780406fad977680a8efb

Available diffs

No changes file available.

Binary packages built by this source

alien-hunter: Interpolated Variable Order Motifs to identify horizontally acquired DNA

 Alien_hunter is an application for the prediction of putative
 Horizontal Gene Transfer (HGT) events with the implementation of
 Interpolated Variable Order Motifs (IVOMs). An IVOM approach
 exploits compositional biases using variable order motif distributions
 and captures more reliably the local composition of a sequence compared
 to fixed-order methods. Optionally the predictions can be parsed into a
 2-state 2nd order Hidden Markov Model (HMM), in a change-point detection
 framework, to optimize the localization of the boundaries of the
 predicted regions. The predictions (embl format) can be automatically
 loaded into Artemis genome viewer freely available at: