https://launchpad.net/ubuntu/+source/allelecount/4.1.0-3/+build/19313242 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-049 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:17:51 UTC 2020 aarch64 Buildd toolchain package versions: launchpad-buildd_188 python-lpbuildd_188 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 16 May 23:12:43 ntpdate[1917]: adjust time server 10.211.37.1 offset 0.059784 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19313242 --image-type chroot /home/buildd/filecache-default/bb4dbf4bd068f4f4da4a9ba56413a8aa8579df72 Creating target for build PACKAGEBUILD-19313242 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19313242 Starting target for build PACKAGEBUILD-19313242 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19313242 'deb http://ftpmaster.internal/ubuntu groovy main universe' 'deb http://ftpmaster.internal/ubuntu groovy-security main universe' 'deb http://ftpmaster.internal/ubuntu groovy-updates main universe' 'deb http://ftpmaster.internal/ubuntu groovy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-19313242 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19313242 Updating target for build PACKAGEBUILD-19313242 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [268 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-security InRelease [89.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-updates InRelease [89.1 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed InRelease [119 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 Packages [941 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main Translation-en [506 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/universe arm64 Packages [8566 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5178 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 Packages [45.7 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main Translation-en [25.8 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/universe arm64 Packages [457 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/universe Translation-en [304 kB] Fetched 16.6 MB in 9s (1834 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files binutils binutils-aarch64-linux-gnu binutils-common cpp-9 dash debconf e2fsprogs g++-9 gcc-10-base gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv libacl1 libapparmor1 libapt-pkg6.0 libasan5 libatomic1 libbinutils libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libext2fs2 libgcc-9-dev libgcc-s1 libgomp1 libidn2-0 libitm1 liblsan0 libncurses6 libncursesw6 libperl5.30 libprocps8 libseccomp2 libsqlite3-0 libss2 libstdc++-9-dev libstdc++6 libsystemd0 libtinfo6 libtsan0 libubsan1 libudev1 linux-libc-dev logsave make ncurses-base ncurses-bin perl perl-base perl-modules-5.30 procps systemd systemd-sysv systemd-timesyncd sysvinit-utils tzdata 66 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 45.7 MB of archives. After this operation, 60.4 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy/main arm64 libcrypt-dev arm64 1:4.4.15-1ubuntu1 [111 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 libcrypt1 arm64 1:4.4.15-1ubuntu1 [82.5 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main arm64 base-files arm64 11ubuntu7 [60.0 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main arm64 libperl5.30 arm64 5.30.0-10 [3772 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 perl arm64 5.30.0-10 [224 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main arm64 perl-base arm64 5.30.0-10 [1390 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main arm64 perl-modules-5.30 all 5.30.0-10 [2738 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main arm64 debconf all 1.5.74 [121 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main arm64 dash arm64 0.5.10.2-7 [84.2 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main arm64 ncurses-bin arm64 6.2-1 [167 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main arm64 ncurses-base all 6.2-1 [18.7 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main arm64 sysvinit-utils arm64 2.96-3ubuntu1 [20.4 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main arm64 libatomic1 arm64 10.1.0-1ubuntu1 [9900 B] Get:14 http://ftpmaster.internal/ubuntu groovy/main arm64 libubsan1 arm64 10.1.0-1ubuntu1 [127 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main arm64 libtsan0 arm64 10.1.0-1ubuntu1 [302 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main arm64 liblsan0 arm64 10.1.0-1ubuntu1 [130 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main arm64 libitm1 arm64 10.1.0-1ubuntu1 [24.2 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main arm64 libgomp1 arm64 10.1.0-1ubuntu1 [93.3 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main arm64 gcc-10-base arm64 10.1.0-1ubuntu1 [19.3 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main arm64 libgcc-s1 arm64 10.1.0-1ubuntu1 [34.8 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main arm64 libcc1-0 arm64 10.1.0-1ubuntu1 [37.1 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main arm64 libstdc++6 arm64 10.1.0-1ubuntu1 [463 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main arm64 systemd-sysv arm64 245.5-2ubuntu2 [10.3 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main arm64 systemd-timesyncd arm64 245.5-2ubuntu2 [26.2 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main arm64 libacl1 arm64 2.2.53-8 [17.9 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main arm64 libapparmor1 arm64 2.13.3-7ubuntu6 [33.1 kB] Get:27 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libcap2 arm64 1:2.34-2 [16.7 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main arm64 libcryptsetup12 arm64 2:2.3.1-1ubuntu1 [176 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main arm64 libidn2-0 arm64 2.3.0-1 [51.9 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main arm64 libseccomp2 arm64 2.4.3-1ubuntu2 [39.9 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main arm64 systemd arm64 245.5-2ubuntu2 [3488 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main arm64 libsystemd0 arm64 245.5-2ubuntu2 [249 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main arm64 libudev1 arm64 245.5-2ubuntu2 [72.2 kB] Get:34 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libapt-pkg6.0 arm64 2.1.2 [762 kB] Get:35 http://ftpmaster.internal/ubuntu groovy/main arm64 gpgv arm64 2.2.20-1ubuntu1 [184 kB] Get:36 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 apt arm64 2.1.2 [1238 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main arm64 logsave arm64 1.45.6-1ubuntu1 [10.2 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main arm64 libext2fs2 arm64 1.45.6-1ubuntu1 [177 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main arm64 e2fsprogs arm64 1.45.6-1ubuntu1 [504 kB] Get:40 http://ftpmaster.internal/ubuntu groovy/main arm64 libncurses6 arm64 6.2-1 [91.8 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/main arm64 libncursesw6 arm64 6.2-1 [120 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main arm64 libtinfo6 arm64 6.2-1 [81.2 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main arm64 libcom-err2 arm64 1.45.6-1ubuntu1 [9336 B] Get:44 http://ftpmaster.internal/ubuntu groovy/main arm64 libprocps8 arm64 2:3.3.16-4ubuntu1 [31.6 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main arm64 libss2 arm64 1.45.6-1ubuntu1 [10.7 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main arm64 procps arm64 2:3.3.16-4ubuntu1 [229 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main arm64 libsqlite3-0 arm64 3.31.1-5 [505 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main arm64 tzdata all 2020a-0ubuntu1 [293 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main arm64 libctf0 arm64 2.34-7ubuntu1 [43.0 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils-aarch64-linux-gnu arm64 2.34-7ubuntu1 [1988 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main arm64 libbinutils arm64 2.34-7ubuntu1 [473 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils arm64 2.34-7ubuntu1 [3348 B] Get:53 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils-common arm64 2.34-7ubuntu1 [207 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main arm64 libctf-nobfd0 arm64 2.34-7ubuntu1 [43.8 kB] Get:55 http://ftpmaster.internal/ubuntu groovy/main arm64 libasan5 arm64 9.3.0-12ubuntu1 [365 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/main arm64 g++-9 arm64 9.3.0-12ubuntu1 [6819 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main arm64 gcc-9 arm64 9.3.0-12ubuntu1 [6692 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/main arm64 libstdc++-9-dev arm64 9.3.0-12ubuntu1 [1679 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main arm64 libgcc-9-dev arm64 9.3.0-12ubuntu1 [919 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main arm64 cpp-9 arm64 9.3.0-12ubuntu1 [5965 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main arm64 gcc-9-base arm64 9.3.0-12ubuntu1 [19.5 kB] Get:62 http://ftpmaster.internal/ubuntu groovy/main arm64 gpg arm64 2.2.20-1ubuntu1 [443 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main arm64 gpgconf arm64 2.2.20-1ubuntu1 [117 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main arm64 gpg-agent arm64 2.2.20-1ubuntu1 [216 kB] Get:65 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 linux-libc-dev arm64 5.4.0-29.33 [1079 kB] Get:66 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 make arm64 4.2.1-2 [154 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 45.7 MB in 8s (5812 kB/s) (Reading database ... 12809 files and directories currently installed.) 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Setting up libgomp1:arm64 (10.1.0-1ubuntu1) ... Setting up libcap2:arm64 (1:2.34-2) ... Setting up tzdata (2020a-0ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Sat May 16 23:13:34 UTC 2020. Universal Time is now: Sat May 16 23:13:34 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up make (4.2.1-2) ... Setting up libncurses6:arm64 (6.2-1) ... Setting up libatomic1:arm64 (10.1.0-1ubuntu1) ... Setting up libss2:arm64 (1.45.6-1ubuntu1) ... Setting up libncursesw6:arm64 (6.2-1) ... Setting up logsave (1.45.6-1ubuntu1) ... Setting up libubsan1:arm64 (10.1.0-1ubuntu1) ... Setting up libcrypt-dev:arm64 (1:4.4.15-1ubuntu1) ... Setting up gpgconf (2.2.20-1ubuntu1) ... Setting up libperl5.30:arm64 (5.30.0-10) ... Setting up libcryptsetup12:arm64 (2:2.3.1-1ubuntu1) ... Setting up libbinutils:arm64 (2.34-7ubuntu1) ... Setting up libcc1-0:arm64 (10.1.0-1ubuntu1) ... Setting up gpg (2.2.20-1ubuntu1) ... Setting up liblsan0:arm64 (10.1.0-1ubuntu1) ... Setting up libprocps8:arm64 (2:3.3.16-4ubuntu1) ... Setting up libitm1:arm64 (10.1.0-1ubuntu1) ... Setting up gcc-9-base:arm64 (9.3.0-12ubuntu1) ... Setting up libtsan0:arm64 (10.1.0-1ubuntu1) ... Setting up libctf0:arm64 (2.34-7ubuntu1) ... Setting up gpg-agent (2.2.20-1ubuntu1) ... Setting up binutils-aarch64-linux-gnu (2.34-7ubuntu1) ... Setting up e2fsprogs (1.45.6-1ubuntu1) ... Installing new version of config file /etc/mke2fs.conf ... Setting up binutils (2.34-7ubuntu1) ... Setting up libasan5:arm64 (9.3.0-12ubuntu1) ... Setting up perl (5.30.0-10) ... Setting up procps (2:3.3.16-4ubuntu1) ... Installing new version of config file /etc/sysctl.conf ... Removing obsolete conffile /etc/sysctl.d/10-link-restrictions.conf ... Setting up cpp-9 (9.3.0-12ubuntu1) ... Setting up libgcc-9-dev:arm64 (9.3.0-12ubuntu1) ... Setting up gcc-9 (9.3.0-12ubuntu1) ... Setting up libstdc++-9-dev:arm64 (9.3.0-12ubuntu1) ... Setting up g++-9 (9.3.0-12ubuntu1) ... Setting up systemd-timesyncd (245.5-2ubuntu2) ... Setting up systemd (245.5-2ubuntu2) ... Initializing machine ID from KVM UUID. Setting up systemd-sysv (245.5-2ubuntu2) ... Processing triggers for libc-bin (2.31-0ubuntu9) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19313242 arm64 groovy-proposed -c chroot:build-PACKAGEBUILD-19313242 --arch=arm64 --dist=groovy-proposed --nolog allelecount_4.1.0-3.dsc Initiating build PACKAGEBUILD-19313242 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:17:51 UTC 2020 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-049.buildd +==============================================================================+ | allelecount 4.1.0-3 (arm64) 16 May 2020 23:13 | +==============================================================================+ Package: allelecount Version: 4.1.0-3 Source Version: 4.1.0-3 Distribution: groovy-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/allelecount-WtDgTf/allelecount-4.1.0' with '<>' I: NOTICE: Log filtering will replace 'build/allelecount-WtDgTf' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19313242/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- allelecount_4.1.0-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-5JZYL0/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-5JZYL0/apt_archive ./ InRelease Get:2 copy:/<>/resolver-5JZYL0/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-5JZYL0/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-5JZYL0/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-5JZYL0/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (34.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-5JZYL0/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (63.6 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12809 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 12), libhts-dev, libbz2-dev, libconst-fast-perl, libdevel-cover-perl, libfile-slurp-perl, libfile-which-perl, libipc-system-simple-perl, libpod-coverage-perl, libtest-fatal-perl (>= 0.013), libtry-tiny-perl, perl Filtered Build-Depends: debhelper-compat (= 12), libhts-dev, libbz2-dev, libconst-fast-perl, libdevel-cover-perl, libfile-slurp-perl, libfile-which-perl, libipc-system-simple-perl, libpod-coverage-perl, libtest-fatal-perl (>= 0.013), libtry-tiny-perl, perl dpkg-deb: building package 'sbuild-build-depends-allelecount-dummy' in '/<>/resolver-u45a8P/apt_archive/sbuild-build-depends-allelecount-dummy.deb'. Ign:1 copy:/<>/resolver-u45a8P/apt_archive ./ InRelease Get:2 copy:/<>/resolver-u45a8P/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-u45a8P/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-u45a8P/apt_archive ./ Sources [318 B] Get:5 copy:/<>/resolver-u45a8P/apt_archive ./ Packages [627 B] Fetched 3064 B in 0s (78.1 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install allelecount build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libb-debug-perl libbrotli1 libbsd0 libbz2-dev libconst-fast-perl libcroco3 libcurl3-gnutls libdata-optlist-perl libdebhelper-perl libdeflate0 libdevel-cover-perl libdevel-symdump-perl libelf1 libfile-slurp-perl libfile-stripnondeterminism-perl libfile-which-perl libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhtml-parser-perl libhtml-tagset-perl libhts-dev libhts3 libhx509-5-heimdal libicu66 libipc-system-simple-perl libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libparams-util-perl libpipeline1 libpod-coverage-perl libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-exporter-perl libsub-exporter-progressive-perl libsub-install-perl libsub-override-perl libtest-fatal-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwind0-heimdal libxml2 m4 man-db po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libbrowser-open-perl libcapture-tiny-perl libclass-xsaccessor-perl libjson-maybexs-perl libmoo-perl libnamespace-clean-perl libppi-html-perl | perltidy libsereal-decoder-perl libsereal-encoder-perl libterm-size-perl libtest-differences-perl krb5-doc krb5-user libdata-dump-perl liblzma-doc libtool-doc gfortran | fortran95-compiler gcj-jdk libwww-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc libtemplate-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libhttp-message-perl krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libb-debug-perl libbrotli1 libbsd0 libbz2-dev libconst-fast-perl libcroco3 libcurl3-gnutls libdata-optlist-perl libdebhelper-perl libdeflate0 libdevel-cover-perl libdevel-symdump-perl libelf1 libfile-slurp-perl libfile-stripnondeterminism-perl libfile-which-perl libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhtml-parser-perl libhtml-tagset-perl libhts-dev libhts3 libhx509-5-heimdal libicu66 libipc-system-simple-perl libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libparams-util-perl libpipeline1 libpod-coverage-perl libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-exporter-perl libsub-exporter-progressive-perl libsub-install-perl libsub-override-perl libtest-fatal-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwind0-heimdal libxml2 m4 man-db po-debconf sbuild-build-depends-allelecount-dummy zlib1g-dev 0 upgraded, 82 newly installed, 0 to remove and 0 not upgraded. Need to get 20.5 MB of archives. After this operation, 79.3 MB of additional disk space will be used. Get:1 copy:/<>/resolver-u45a8P/apt_archive ./ sbuild-build-depends-allelecount-dummy 0.invalid.0 [960 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 libbsd0 arm64 0.10.0-1 [43.7 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main arm64 bsdmainutils arm64 11.1.2ubuntu3 [179 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main arm64 libuchardet0 arm64 0.0.6-3build1 [65.0 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 groff-base arm64 1.22.4-5 [797 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main arm64 libpipeline1 arm64 1.5.2-2build1 [26.1 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main arm64 man-db arm64 2.9.1-1 [1095 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main arm64 libmagic-mgc arm64 1:5.38-4 [218 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main arm64 libmagic1 arm64 1:5.38-4 [71.7 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main arm64 file arm64 1:5.38-4 [23.3 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main arm64 libelf1 arm64 0.176-1.1build1 [44.2 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main arm64 libglib2.0-0 arm64 2.64.2-1 [1197 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main arm64 libicu66 arm64 66.1-2ubuntu2 [8357 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main arm64 libxml2 arm64 2.9.10+dfsg-5 [572 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main arm64 gettext-base arm64 0.19.8.1-10build1 [48.2 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main arm64 libkrb5support0 arm64 1.17-6ubuntu4 [30.4 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main arm64 libk5crypto3 arm64 1.17-6ubuntu4 [80.5 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main arm64 libkeyutils1 arm64 1.6.1-2ubuntu1 [9932 B] Get:19 http://ftpmaster.internal/ubuntu groovy/main arm64 libkrb5-3 arm64 1.17-6ubuntu4 [312 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main arm64 libgssapi-krb5-2 arm64 1.17-6ubuntu4 [113 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main arm64 libpsl5 arm64 0.21.0-1ubuntu1 [51.3 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main arm64 libsigsegv2 arm64 2.12-2 [13.3 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main arm64 m4 arm64 1.4.18-4 [194 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main arm64 autoconf all 2.69-11.1 [321 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main arm64 autotools-dev all 20180224.1 [39.6 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main arm64 automake all 1:1.16.1-4ubuntu6 [522 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main arm64 autopoint all 0.19.8.1-10build1 [412 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main arm64 libtool all 2.4.6-14 [161 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main arm64 dh-autoreconf all 19 [16.1 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main arm64 libdebhelper-perl all 13ubuntu1 [62.5 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:32 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http://ftpmaster.internal/ubuntu groovy/main arm64 libasn1-8-heimdal arm64 7.7.0+dfsg-2 [150 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/universe arm64 libb-debug-perl all 1.26-2 [7668 B] Get:44 http://ftpmaster.internal/ubuntu groovy/main arm64 libbrotli1 arm64 1.0.7-6.1 [260 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main arm64 libbz2-dev arm64 1.0.8-2 [31.6 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main arm64 libparams-util-perl arm64 1.07-3build5 [19.2 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main arm64 libsub-install-perl all 0.928-1 [10.5 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main arm64 libdata-optlist-perl all 0.110-1 [9956 B] Get:49 http://ftpmaster.internal/ubuntu groovy/main arm64 libsub-exporter-perl all 0.987-1 [44.9 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main arm64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] Get:51 http://ftpmaster.internal/ubuntu groovy/main arm64 libconst-fast-perl all 0.014-1 [7958 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groovy-proposed/main arm64 libldap-common all 2.4.49+dfsg-2ubuntu2 [17.4 kB] Get:62 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libldap-2.4-2 arm64 2.4.49+dfsg-2ubuntu2 [146 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main arm64 libnghttp2-14 arm64 1.40.0-1build1 [74.7 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2build1 [53.3 kB] Get:65 http://ftpmaster.internal/ubuntu groovy/main arm64 libssh-4 arm64 0.9.3-2ubuntu2 [159 kB] Get:66 http://ftpmaster.internal/ubuntu groovy/main arm64 libcurl3-gnutls arm64 7.68.0-1ubuntu2 [211 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/universe arm64 libdeflate0 arm64 1.6-1 [51.1 kB] Get:68 http://ftpmaster.internal/ubuntu groovy/main arm64 libhtml-tagset-perl all 3.20-4 [12.5 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/main arm64 liburi-perl all 1.76-2 [77.5 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/main arm64 libhtml-parser-perl arm64 3.72-5 [84.1 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/universe arm64 libdevel-cover-perl arm64 1.33-1build1 [176 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main arm64 libdevel-symdump-perl all 2.18-3 [12.7 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/universe arm64 libfile-slurp-perl all 9999.30-1 [21.1 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/main arm64 libfile-which-perl all 1.23-1 [13.8 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhts3 arm64 1.10.2-3 [316 kB] Get:76 http://ftpmaster.internal/ubuntu groovy/main arm64 liblzma-dev arm64 5.2.4-1 [144 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2ubuntu1 [154 kB] Get:78 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhts-dev arm64 1.10.2-3 [92.1 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/main arm64 libipc-system-simple-perl all 1.30-1 [23.2 kB] Get:80 http://ftpmaster.internal/ubuntu groovy/universe arm64 libpod-coverage-perl all 0.23-1 [22.8 kB] Get:81 http://ftpmaster.internal/ubuntu groovy/main arm64 libtry-tiny-perl all 0.30-1 [20.5 kB] Get:82 http://ftpmaster.internal/ubuntu groovy/main arm64 libtest-fatal-perl all 0.014-1 [11.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 20.5 MB in 2s (12.7 MB/s) Selecting previously unselected package libbsd0:arm64. 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Setting up libhcrypto4-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libwind0-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up bsdmainutils (11.1.2ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-6ubuntu4) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up libcroco3:arm64 (0.6.13-1) ... Setting up libssh-4:arm64 (0.9.3-2ubuntu2) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.8.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up automake (1:1.16.1-4ubuntu6) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libdevel-cover-perl (1.33-1build1) ... Setting up gettext (0.19.8.1-10build1) ... Setting up libhx509-5-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libconst-fast-perl (0.014-1) ... Setting up libkrb5-26-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up po-debconf (1.0.21) ... Setting up libheimntlm0-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libgssapi3-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libldap-2.4-2:arm64 (2.4.49+dfsg-2ubuntu2) ... Setting up libcurl3-gnutls:arm64 (7.68.0-1ubuntu2) ... Setting up libhts3:arm64 (1.10.2-3) ... Setting up libhts-dev:arm64 (1.10.2-3) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13ubuntu1) ... Setting up sbuild-build-depends-allelecount-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-0ubuntu9) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-177-generic arm64 (aarch64) Toolchain package versions: binutils_2.34-7ubuntu1 dpkg-dev_1.19.7ubuntu3 g++-9_9.3.0-12ubuntu1 gcc-9_9.3.0-12ubuntu1 libc6-dev_2.31-0ubuntu9 libstdc++-9-dev_9.3.0-12ubuntu1 libstdc++6_10.1.0-1ubuntu1 linux-libc-dev_5.4.0-29.33 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.2 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu6 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu7 base-passwd_3.5.47 bash_5.0-6ubuntu1 binutils_2.34-7ubuntu1 binutils-aarch64-linux-gnu_2.34-7ubuntu1 binutils-common_2.34-7ubuntu1 bsdmainutils_11.1.2ubuntu3 bsdutils_1:2.34-0.1ubuntu9 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110ubuntu1 coreutils_8.30-3ubuntu2 cpp_4:9.3.0-1ubuntu2 cpp-9_9.3.0-12ubuntu1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.8.0-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu3 dpkg-dev_1.19.7ubuntu3 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu9 file_1:5.38-4 findutils_4.7.0-1ubuntu1 g++_4:9.3.0-1ubuntu2 g++-9_9.3.0-12ubuntu1 gcc_4:9.3.0-1ubuntu2 gcc-10-base_10.1.0-1ubuntu1 gcc-9_9.3.0-12ubuntu1 gcc-9-base_9.3.0-12ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-0ubuntu4 hostname_3.23 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_2.13.3-7ubuntu6 libapt-pkg6.0_2.1.2 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2 libasan5_9.3.0-12ubuntu1 libasn1-8-heimdal_7.7.0+dfsg-2 libassuan0_2.5.3-7ubuntu2 libatomic1_10.1.0-1ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu6 libaudit1_1:2.8.5-2ubuntu6 libb-debug-perl_1.26-2 libbinutils_2.34-7ubuntu1 libblkid1_2.34-0.1ubuntu9 libbrotli1_1.0.7-6.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.31-0ubuntu9 libc-dev-bin_2.31-0ubuntu9 libc6_2.31-0ubuntu9 libc6-dev_2.31-0ubuntu9 libcap-ng0_0.7.9-2.1build1 libcap2_1:2.34-2 libcc1-0_10.1.0-1ubuntu1 libcom-err2_1.45.6-1ubuntu1 libconst-fast-perl_0.014-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.15-1ubuntu1 libcrypt1_1:4.4.15-1ubuntu1 libcryptsetup12_2:2.3.1-1ubuntu1 libctf-nobfd0_2.34-7ubuntu1 libctf0_2.34-7ubuntu1 libcurl3-gnutls_7.68.0-1ubuntu2 libdata-optlist-perl_0.110-1 libdb5.3_5.3.28+dfsg1-0.6ubuntu2 libdebconfclient0_0.251ubuntu1 libdebhelper-perl_13ubuntu1 libdeflate0_1.6-1 libdevel-cover-perl_1.33-1build1 libdevel-symdump-perl_2.18-3 libdevmapper1.02.1_2:1.02.167-1ubuntu1 libdpkg-perl_1.19.7ubuntu3 libelf1_0.176-1.1build1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu9 libffi7_3.3-4 libfile-slurp-perl_9999.30-1 libfile-stripnondeterminism-perl_1.8.0-1 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-12ubuntu1 libgcc-s1_10.1.0-1ubuntu1 libgcrypt20_1.8.5-5ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2ubuntu1 libgomp1_10.1.0-1ubuntu1 libgpg-error0_1.37-1 libgssapi-krb5-2_1.17-6ubuntu4 libgssapi3-heimdal_7.7.0+dfsg-2 libhcrypto4-heimdal_7.7.0+dfsg-2 libheimbase1-heimdal_7.7.0+dfsg-2 libheimntlm0-heimdal_7.7.0+dfsg-2 libhogweed5_3.5.1+really3.5.1-2 libhtml-parser-perl_3.72-5 libhtml-tagset-perl_3.20-4 libhts-dev_1.10.2-3 libhts3_1.10.2-3 libhx509-5-heimdal_7.7.0+dfsg-2 libicu66_66.1-2ubuntu2 libidn2-0_2.3.0-1 libip4tc2_1.8.4-3ubuntu2 libipc-system-simple-perl_1.30-1 libisl22_0.22.1-1 libitm1_10.1.0-1ubuntu1 libjson-c4_0.13.1+dfsg-7 libk5crypto3_1.17-6ubuntu4 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27-1ubuntu2 libkrb5-26-heimdal_7.7.0+dfsg-2 libkrb5-3_1.17-6ubuntu4 libkrb5support0_1.17-6ubuntu4 libldap-2.4-2_2.4.49+dfsg-2ubuntu2 libldap-common_2.4.49+dfsg-2ubuntu2 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.1.0-1ubuntu1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1ubuntu9 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1build1 libnpth0_1.6-1 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libparams-util-perl_1.07-3build5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12build1 libperl5.30_5.30.0-10 libpipeline1_1.5.2-2build1 libpng16-16_1.6.37-2 libpod-coverage-perl_0.23-1 libprocps8_2:3.3.16-4ubuntu1 libpsl5_0.21.0-1ubuntu1 libreadline8_8.0-4 libroken18-heimdal_7.7.0+dfsg-2 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1ubuntu2 libselinux1_3.0-1build2 libsemanage-common_3.0-1build2 libsemanage1_3.0-1build2 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu9 libsqlite3-0_3.31.1-5 libss2_1.45.6-1ubuntu1 libssh-4_0.9.3-2ubuntu2 libssl1.1_1.1.1f-1ubuntu2 libstdc++-9-dev_9.3.0-12ubuntu1 libstdc++6_10.1.0-1ubuntu1 libsub-exporter-perl_0.987-1 libsub-exporter-progressive-perl_0.001013-1 libsub-install-perl_0.928-1 libsub-override-perl_0.09-2 libsystemd0_245.5-2ubuntu2 libtasn1-6_4.16.0-2 libtest-fatal-perl_0.014-1 libtinfo6_6.2-1 libtool_2.4.6-14 libtry-tiny-perl_0.30-1 libtsan0_10.1.0-1ubuntu1 libubsan1_10.1.0-1ubuntu1 libuchardet0_0.0.6-3build1 libudev1_245.5-2ubuntu2 libunistring2_0.9.10-2 liburi-perl_1.76-2 libuuid1_2.34-0.1ubuntu9 libwind0-heimdal_7.7.0+dfsg-2 libxml2_2.9.10+dfsg-5 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.4.0-29.33 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu5 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1ubuntu9 ncurses-base_6.2-1 ncurses-bin_6.2-1 openssl_1.1.1f-1ubuntu2 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu5 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.30_5.30.0-10 pinentry-curses_1.1.0-3build1 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-4ubuntu1 readline-common_8.0-4 sbuild-build-depends-allelecount-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_245.5-2ubuntu2 systemd-sysv_245.5-2ubuntu2 systemd-timesyncd_245.5-2ubuntu2 sysvinit-utils_2.96-3ubuntu1 tar_1.30+dfsg-7 tzdata_2020a-0ubuntu1 ubuntu-keyring_2020.02.11.2 util-linux_2.34-0.1ubuntu9 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 zlib1g-dev_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sat May 16 13:48:21 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./allelecount_4.1.0-3.dsc dpkg-source: info: extracting allelecount in allelecount-4.1.0 dpkg-source: info: unpacking allelecount_4.1.0.orig.tar.gz dpkg-source: info: unpacking allelecount_4.1.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19313242 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19313242 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19313242 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package allelecount dpkg-buildpackage: info: source version 4.1.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean --sourcedirectory=c cd c && make -j4 clean make[2]: Entering directory '/<>/c' rm -f ./src/*.o *~ ./bin/alleleCounter ./bin/* ./tests/tests_log ./tests/bam_access_tests ./src/*.gcda ./src/*.gcov ./src/*.gcno *.gcda *.gcov *.gcno ./tests/*.gcda ./tests/*.gcov ./tests/*.gcno make[2]: Leaving directory '/<>/c' dh_auto_clean --sourcedirectory=perl make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure --sourcedirectory=c dh_auto_configure --sourcedirectory=perl cd perl && perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for alleleCount Writing MYMETA.yml and MYMETA.json make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build --sourcedirectory=c cd c && make -j4 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/c' rm -f ./src/*.o *~ ./bin/alleleCounter ./bin/* ./tests/tests_log ./tests/bam_access_tests ./src/*.gcda ./src/*.gcov ./src/*.gcno *.gcda *.gcov *.gcno ./tests/*.gcda ./tests/*.gcov ./tests/*.gcno mkdir -p ./bin mkdir -p ./htslib_tmp #Do some magic to ensure we compile ALLELECOUNT with the static libhts.a rather than libhts.so ln -fs /libhts.a ./htslib_tmp/libhts.a gcc -O3 -DALLELECOUNTER_VERSION='"4.1.0"' -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -I/usr/local//include -Isrc/ -I/ -rdynamic -c src/bam_access.c -o src/bam_access.o src/bam_access.c: In function ‘pileupCounts’: src/bam_access.c:132:56: warning: ‘pre_b’ may be used uninitialized in this function [-Wmaybe-uninitialized] 132 | if(!(p->is_del) && qual >= min_base_qual && (absent || pre_b != c)){ | ~~~~~~~~^~~~~~~~~~~~~~ gcc -O3 -DALLELECOUNTER_VERSION='"4.1.0"' -I/usr/local//include -Isrc/ -I/ -rdynamic -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -o ./bin/alleleCounter ./src/bam_access.o -L./htslib_tmp -L/usr/local//lib -lhts -lpthread -lz -lbz2 -llzma -lm -ldl ./src/alleleCounter.c -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now gcc -O3 -DALLELECOUNTER_VERSION='"4.1.0"' -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -I/usr/local//include -Isrc/ -I/ -rdynamic ./src/bam_access.o -L./htslib_tmp -lhts -lpthread -lz -lbz2 -llzma -lm -ldl -L/usr/local//lib -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now tests/bam_access_tests.c -o tests/bam_access_tests tests/bam_access_tests.c: In function ‘test_bam_access_get_position_base_counts’: tests/bam_access_tests.c:45:6: warning: variable ‘res’ set but not used [-Wunused-but-set-variable] 45 | int res = bam_access_get_position_base_counts(chr,pos,stats,0,NULL); | ^~~ sh ./tests/runtests.sh Running unit tests: ---- RUNNING: ./tests/bam_access_tests Performing pileup of 11250 reads at 1 198661939 ALL TESTS PASSED Tests run: 1 tests/bam_access_tests PASS remove tmp hts location rm -rf ./htslib_tmp Binaries have been compiled. make[2]: Leaving directory '/<>/c' dh_auto_build --sourcedirectory=perl cd perl && make -j4 make[2]: Entering directory '/<>/perl' cp lib/Sanger/CGP/AlleleCount.pm blib/lib/Sanger/CGP/AlleleCount.pm cp lib/Sanger/CGP/AlleleCount/Genotype.pm blib/lib/Sanger/CGP/AlleleCount/Genotype.pm cp bin/alleleCounter.pl blib/script/alleleCounter.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/alleleCounter.pl Manifying 1 pod document Manifying 1 pod document make[2]: Leaving directory '/<>/perl' make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' dh_auto_test --sourcedirectory=c cd c && make -j4 test make[2]: Entering directory '/<>/c' sh ./tests/runtests.sh Running unit tests: ---- RUNNING: ./tests/bam_access_tests Performing pileup of 11250 reads at 1 198661939 ALL TESTS PASSED Tests run: 1 tests/bam_access_tests PASS make[2]: Leaving directory '/<>/c' dh_auto_test --sourcedirectory=perl cd perl && make -j4 test TEST_VERBOSE=1 make[2]: Entering directory '/<>/perl' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/1_pm_compile.t .. ok 1 - use Sanger::CGP::AlleleCount; ok 2 - use Sanger::CGP::AlleleCount::Genotype; ok 3 - Check version inheritance exists (Sanger::CGP::AlleleCount) ok 4 - Check version inheritance exists (Sanger::CGP::AlleleCount::Genotype) ok 5 - An object of class 'Sanger::CGP::AlleleCount::Genotype' isa 'Sanger::CGP::AlleleCount::Genotype' 1..5 ok t/2_pl_compile.t .. ok 1 - Compilation check: /<>/perl/t/../bin/alleleCounter.pl 1..1 ok t/genotype.t ...... ok 1 - An object of class 'Sanger::CGP::AlleleCount::Genotype' isa 'Sanger::CGP::AlleleCount::Genotype' ok 2 - An object of class 'Sanger::CGP::AlleleCount::Genotype' isa 'Sanger::CGP::AlleleCount::Genotype' ok 3 - Check execution of loci profile (BAM) ok 4 - Expected result for defaults (BAM) ok 5 - Check execution of loci profile (BAM, pbq=20) ok 6 - Expected result for defaults (BAM, pbq=20) ok 7 - Check execution of loci profile (BAM, mapq=1) ok 8 - Expected result for defaults (BAM, mapq=1) ok 9 - Check execution of snp6 loci profile (BAM) ok 10 - Expected result for defaults (BAM) ok 11 - Check execution of snp6 loci profile (BAM, pbq=20) ok 12 - Expected result for defaults (BAM, pbq=20) ok 13 - Check execution of snp6 loci profile (BAM, mapq=1) ok 14 - Expected result for defaults (BAM, mapq>0) ok 15 - Check execution of loci profile (CRAM) ok 16 - Expected result for defaults (CRAM) ok 17 - Check execution of loci profile (CRAM, pbq=20) ok 18 - Expected result for defaults (CRAM, pbq=20) ok 19 - Check execution of loci profile (CRAM, mapq=1) ok 20 - Expected result for defaults (CRAM, mapq=1) ok 21 - Check execution of snp6 loci profile (CRAM) ok 22 - Expected result for defaults (CRAM) ok 23 - Check execution of snp6 loci profile (CRAM, pbq=20) ok 24 - Expected result for defaults (CRAM, pbq=20) ok 25 - Check execution of snp6 loci profile (CRAM, mapq=1) ok 26 - Expected result for defaults (CRAM, mapq=1) 1..26 ok All tests successful. Files=3, Tests=32, 2 wallclock secs ( 0.08 usr 0.03 sys + 1.26 cusr 0.32 csys = 1.69 CPU) Result: PASS make[2]: Leaving directory '/<>/perl' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install --sourcedirectory=c dh_auto_install --sourcedirectory=perl cd perl && make -j4 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no PREFIX=/usr make[2]: Entering directory '/<>/perl' Manifying 1 pod document Manifying 1 pod document Installing /<>/debian/tmp/usr/share/perl5/Sanger/CGP/AlleleCount.pm Installing /<>/debian/tmp/usr/share/perl5/Sanger/CGP/AlleleCount/Genotype.pm Installing /<>/debian/tmp/usr/share/man/man1/alleleCounter.pl.1p Installing /<>/debian/tmp/usr/share/man/man3/Sanger::CGP::AlleleCount::Genotype.3pm Installing /<>/debian/tmp/usr/bin/alleleCounter.pl make[2]: Leaving directory '/<>/perl' make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing allelecount (in debian/allelecount); do_strip: , oemstrip: pkgstriptranslations: processing allelecount-dbgsym (in debian/.debhelper/allelecount/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/allelecount/DEBIAN/control, package allelecount, directory debian/allelecount pkgstripfiles: processing control file: debian/.debhelper/allelecount/dbgsym-root/DEBIAN/control, package allelecount-dbgsym, directory debian/.debhelper/allelecount/dbgsym-root dpkg-deb: building package 'allelecount-dbgsym' in 'debian/.debhelper/scratch-space/build-allelecount/allelecount-dbgsym_4.1.0-3_arm64.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package allelecount ... pkgstripfiles: No PNG files. dpkg-deb: building package 'allelecount' in '../allelecount_4.1.0-3_arm64.deb'. Renaming allelecount-dbgsym_4.1.0-3_arm64.deb to allelecount-dbgsym_4.1.0-3_arm64.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../allelecount_4.1.0-3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200516-2314 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ allelecount_4.1.0-3_arm64.changes: ---------------------------------- Format: 1.8 Date: Sat, 16 May 2020 15:27:25 +0200 Source: allelecount Binary: allelecount Architecture: arm64 Version: 4.1.0-3 Distribution: groovy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: allelecount - NGS copy number algorithms Closes: 960757 Changes: allelecount (4.1.0-3) unstable; urgency=medium . * Just use Build-Depends to enable build time testing Closes: #960757 Checksums-Sha1: 6a3d26a4628153ce1fbc4bab9a1094a671ec26a8 35528 allelecount-dbgsym_4.1.0-3_arm64.ddeb 4e3c9e9833bbaff239de87b764f89cdb849528c9 7036 allelecount_4.1.0-3_arm64.buildinfo bdf5412ec933c0762950566081646e6f27a2f58a 26696 allelecount_4.1.0-3_arm64.deb Checksums-Sha256: 86824848cb07d1c7bc6649daba78687f32d28e0cc019e04bfa2d47d78c9f720c 35528 allelecount-dbgsym_4.1.0-3_arm64.ddeb 233204e58043e0c7d1cff2e04b2ec4af9b8ae1775f992f6beb12c2da152ee217 7036 allelecount_4.1.0-3_arm64.buildinfo bb106fade1b0a6e139387630cf99cd1aa470f818544da5f15c314c7a6df9feaa 26696 allelecount_4.1.0-3_arm64.deb Files: 820d87cbddd6f56273c0696c34435eeb 35528 debug optional allelecount-dbgsym_4.1.0-3_arm64.ddeb cda44997aa0967f04d02923bc74ac885 7036 science optional allelecount_4.1.0-3_arm64.buildinfo 8d44a957be19f7a597c0c186d9aa7ed9 26696 science optional allelecount_4.1.0-3_arm64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ allelecount_4.1.0-3_arm64.deb ----------------------------- new debian package, version 2.0. size 26696 bytes: control archive=904 bytes. 748 bytes, 17 lines control 352 bytes, 5 lines md5sums Package: allelecount Version: 4.1.0-3 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 85 Depends: libc6 (>= 2.17), libhts3 (>= 1.10) Section: science Priority: optional Homepage: https://github.com/cancerit/alleleCount Description: NGS copy number algorithms Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings). . The alleleCount package primarily exists to prevent code duplication between some other projects, specifically AscatNGS and Battenberg. drwxr-xr-x root/root 0 2020-05-16 13:27 ./ drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/ drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/bin/ -rwxr-xr-x root/root 35264 2020-05-16 13:27 ./usr/bin/alleleCounter drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/share/ drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/share/doc/allelecount/ -rw-r--r-- root/root 341 2020-05-16 13:27 ./usr/share/doc/allelecount/changelog.Debian.gz -rw-r--r-- root/root 35101 2020-05-16 13:27 ./usr/share/doc/allelecount/copyright drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 120 2020-05-16 13:27 ./usr/share/lintian/overrides/allelecount drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/share/man/ drwxr-xr-x root/root 0 2020-05-16 13:27 ./usr/share/man/man1/ -rw-r--r-- root/root 1132 2020-05-16 13:27 ./usr/share/man/man1/alleleCounter.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 2808 Build-Time: 28 Distribution: groovy-proposed Host Architecture: arm64 Install-Time: 27 Job: allelecount_4.1.0-3.dsc Machine Architecture: arm64 Package: allelecount Package-Time: 57 Source-Version: 4.1.0-3 Space: 2808 Status: successful Version: 4.1.0-3 -------------------------------------------------------------------------------- Finished at 20200516-2314 Build needed 00:00:57, 2808k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19313242 Scanning for processes to kill in build PACKAGEBUILD-19313242