RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux postal04 3.13.0-8-generic #28-Ubuntu SMP Tue Feb 11 17:58:07 UTC 2014 ppc64le Buildd toolchain package versions: launchpad-buildd_121~0.IS.08.04.0 python-lpbuildd_121~0.IS.08.04.0 dpkg-dev_1.17.5ubuntu4. Syncing the system clock with the buildd NTP service... 28 Feb 07:07:57 ntpdate[21261]: adjust time server 10.211.37.1 offset -0.000355 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5645902', '/home/buildd/filecache-default/aabc9cb3b8af7e262bbf6bfae32b9f7021db16d4'] Unpacking chroot for build PACKAGEBUILD-5645902 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5645902'] Mounting chroot for build PACKAGEBUILD-5645902 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5645902', 'deb http://ftpmaster.internal/ubuntu trusty main universe', 'deb http://ftpmaster.internal/ubuntu trusty-security main universe', 'deb http://ftpmaster.internal/ubuntu trusty-updates main universe', 'deb http://ftpmaster.internal/ubuntu trusty-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-5645902 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5645902', 'ppc64el'] Updating debian chroot for build PACKAGEBUILD-5645902 Ign http://ftpmaster.internal trusty InRelease Ign http://archive-team.internal trusty InRelease Ign http://ftpmaster.internal trusty-security InRelease Ign http://archive-team.internal trusty Release.gpg Ign http://ftpmaster.internal trusty-updates InRelease Hit http://archive-team.internal trusty Release Ign http://ftpmaster.internal trusty-proposed InRelease Ign http://archive-team.internal trusty/main ppc64el Packages/DiffIndex Get:1 http://ftpmaster.internal trusty Release.gpg [933 B] Get:2 http://ftpmaster.internal trusty-security Release.gpg [933 B] Get:3 http://ftpmaster.internal trusty-updates Release.gpg [933 B] Get:4 http://ftpmaster.internal trusty-proposed Release.gpg [933 B] Get:5 http://ftpmaster.internal trusty Release [58.5 kB] Get:6 http://ftpmaster.internal trusty-security Release [58.5 kB] Ign http://archive-team.internal trusty/main Translation-en Get:7 http://ftpmaster.internal trusty-updates Release [58.5 kB] Hit http://archive-team.internal trusty/main ppc64el Packages Get:8 http://ftpmaster.internal trusty-proposed Release [58.5 kB] Get:9 http://ftpmaster.internal trusty/main ppc64el Packages [1231 kB] Get:10 http://ftpmaster.internal trusty/universe ppc64el Packages [5041 kB] Get:11 http://ftpmaster.internal trusty/main Translation-en [763 kB] Get:12 http://ftpmaster.internal trusty/universe Translation-en [4049 kB] Get:13 http://ftpmaster.internal trusty-security/main ppc64el Packages [14 B] Get:14 http://ftpmaster.internal trusty-security/universe ppc64el Packages [14 B] Get:15 http://ftpmaster.internal trusty-security/main Translation-en [14 B] Get:16 http://ftpmaster.internal trusty-security/universe Translation-en [14 B] Get:17 http://ftpmaster.internal trusty-updates/main ppc64el Packages [14 B] Get:18 http://ftpmaster.internal trusty-updates/universe ppc64el Packages [14 B] Get:19 http://ftpmaster.internal trusty-updates/main Translation-en [14 B] Get:20 http://ftpmaster.internal trusty-updates/universe Translation-en [14 B] Get:21 http://ftpmaster.internal trusty-proposed/main ppc64el Packages [15.8 kB] Get:22 http://ftpmaster.internal trusty-proposed/universe ppc64el Packages [50.8 kB] Get:23 http://ftpmaster.internal trusty-proposed/main Translation-en [15.7 kB] Get:24 http://ftpmaster.internal trusty-proposed/universe Translation-en [52.6 kB] Fetched 11.5 MB in 7s (1479 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libtasn1-3 Use 'apt-get autoremove' to remove it. The following NEW packages will be installed: libtasn1-6 The following packages will be upgraded: apt apt-transport-https base-files cpp-4.8 g++-4.8 gcc-4.8 gcc-4.8-base libapt-pkg4.12 libatomic1 libcloog-isl4 libgcc-4.8-dev libgnutls26 libgomp1 libitm1 libp11-kit0 libstdc++-4.8-dev libstdc++6 linux-libc-dev 18 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After this operation, 141 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main base-files ppc64el 7.2ubuntu4 [61.2 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libitm1 ppc64el 4.8.2-16ubuntu4 [28.8 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libgomp1 ppc64el 4.8.2-16ubuntu4 [22.0 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libatomic1 ppc64el 4.8.2-16ubuntu4 [7888 B] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main libcloog-isl4 ppc64el 0.18.2-1 [57.1 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main g++-4.8 ppc64el 4.8.2-16ubuntu4 [6236 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8 ppc64el 4.8.2-16ubuntu4 [4808 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main cpp-4.8 ppc64el 4.8.2-16ubuntu4 [4425 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++-4.8-dev ppc64el 4.8.2-16ubuntu4 [1087 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libgcc-4.8-dev ppc64el 4.8.2-16ubuntu4 [245 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8-base ppc64el 4.8.2-16ubuntu4 [14.8 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++6 ppc64el 4.8.2-16ubuntu4 [270 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main libapt-pkg4.12 ppc64el 0.9.15.4ubuntu2 [623 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main apt ppc64el 0.9.15.4ubuntu2 [957 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libp11-kit0 ppc64el 0.20.2-1ubuntu2 [75.4 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libtasn1-6 ppc64el 3.4-3 [42.6 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libgnutls26 ppc64el 2.12.23-12ubuntu1 [358 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main apt-transport-https ppc64el 0.9.15.4ubuntu2 [24.8 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty-proposed/main linux-libc-dev ppc64el 3.13.0-14.34 [753 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 20.1 MB in 14s (1381 kB/s) (Reading database ... 11636 files and directories currently installed.) Preparing to unpack .../base-files_7.2ubuntu4_ppc64el.deb ... Unpacking base-files (7.2ubuntu4) over (7.2ubuntu3) ... Setting up base-files (7.2ubuntu4) ... (Reading database ... 11636 files and directories currently installed.) Preparing to unpack .../libitm1_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking libitm1:ppc64el (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Preparing to unpack .../libgomp1_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking libgomp1:ppc64el (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Preparing to unpack .../libatomic1_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking libatomic1:ppc64el (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Preparing to unpack .../libcloog-isl4_0.18.2-1_ppc64el.deb ... Unpacking libcloog-isl4:ppc64el (0.18.2-1) over (0.18.1-3) ... Preparing to unpack .../g++-4.8_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking g++-4.8 (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Preparing to unpack .../gcc-4.8_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking gcc-4.8 (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Preparing to unpack .../cpp-4.8_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking cpp-4.8 (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Preparing to unpack .../libstdc++-4.8-dev_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking libstdc++-4.8-dev:ppc64el (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Preparing to unpack .../libgcc-4.8-dev_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking libgcc-4.8-dev:ppc64el (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Preparing to unpack .../gcc-4.8-base_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking gcc-4.8-base:ppc64el (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Setting up gcc-4.8-base:ppc64el (4.8.2-16ubuntu4) ... (Reading database ... 11636 files and directories currently installed.) Preparing to unpack .../libstdc++6_4.8.2-16ubuntu4_ppc64el.deb ... Unpacking libstdc++6:ppc64el (4.8.2-16ubuntu4) over (4.8.2-16ubuntu3) ... Setting up libstdc++6:ppc64el (4.8.2-16ubuntu4) ... Processing triggers for libc-bin (2.19-0ubuntu2) ... (Reading database ... 11636 files and directories currently installed.) Preparing to unpack .../libapt-pkg4.12_0.9.15.4ubuntu2_ppc64el.deb ... Unpacking libapt-pkg4.12:ppc64el (0.9.15.4ubuntu2) over (0.9.15.4ubuntu1) ... Setting up libapt-pkg4.12:ppc64el (0.9.15.4ubuntu2) ... Processing triggers for libc-bin (2.19-0ubuntu2) ... (Reading database ... 11636 files and directories currently installed.) Preparing to unpack .../apt_0.9.15.4ubuntu2_ppc64el.deb ... Unpacking apt (0.9.15.4ubuntu2) over (0.9.15.4ubuntu1) ... Setting up apt (0.9.15.4ubuntu2) ... Processing triggers for libc-bin (2.19-0ubuntu2) ... (Reading database ... 11636 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.20.2-1ubuntu2_ppc64el.deb ... Unpacking libp11-kit0:ppc64el (0.20.2-1ubuntu2) over (0.20.2-1ubuntu1) ... Selecting previously unselected package libtasn1-6:ppc64el. Preparing to unpack .../libtasn1-6_3.4-3_ppc64el.deb ... Unpacking libtasn1-6:ppc64el (3.4-3) ... Preparing to unpack .../libgnutls26_2.12.23-12ubuntu1_ppc64el.deb ... Unpacking libgnutls26:ppc64el (2.12.23-12ubuntu1) over (2.12.23-1ubuntu5) ... Preparing to unpack .../apt-transport-https_0.9.15.4ubuntu2_ppc64el.deb ... Unpacking apt-transport-https (0.9.15.4ubuntu2) over (0.9.15.4ubuntu1) ... Preparing to unpack .../linux-libc-dev_3.13.0-14.34_ppc64el.deb ... Unpacking linux-libc-dev:ppc64el (3.13.0-14.34) over (3.13.0-12.32) ... Setting up libitm1:ppc64el (4.8.2-16ubuntu4) ... Setting up libgomp1:ppc64el (4.8.2-16ubuntu4) ... Setting up libatomic1:ppc64el (4.8.2-16ubuntu4) ... Setting up libcloog-isl4:ppc64el (0.18.2-1) ... Setting up cpp-4.8 (4.8.2-16ubuntu4) ... Setting up libgcc-4.8-dev:ppc64el (4.8.2-16ubuntu4) ... Setting up gcc-4.8 (4.8.2-16ubuntu4) ... Setting up libstdc++-4.8-dev:ppc64el (4.8.2-16ubuntu4) ... Setting up g++-4.8 (4.8.2-16ubuntu4) ... Setting up libp11-kit0:ppc64el (0.20.2-1ubuntu2) ... Setting up libtasn1-6:ppc64el (3.4-3) ... Setting up libgnutls26:ppc64el (2.12.23-12ubuntu1) ... Setting up apt-transport-https (0.9.15.4ubuntu2) ... Setting up linux-libc-dev:ppc64el (3.13.0-14.34) ... Processing triggers for libc-bin (2.19-0ubuntu2) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5645902', 'ppc64el', 'trusty-proposed', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty-proposed', '--purpose=PRIMARY', '--architecture=ppc64el', '--comp=universe', 'ampliconnoise_1.29-2.dsc'] Initiating build PACKAGEBUILD-5645902 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.13.0-8-generic #28-Ubuntu SMP Tue Feb 11 17:58:07 UTC 2014 ppc64le Automatic build of ampliconnoise_1.29-2 on postal04 by sbuild/ppc64el 1.170.5 Build started at 20140228-0708 ****************************************************************************** ampliconnoise_1.29-2.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 9), libgsl0-dev, libopenmpi-dev Checking for already installed source dependencies... debhelper: missing libgsl0-dev: missing libopenmpi-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper libgsl0-dev libopenmpi-dev Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libtasn1-3 Use 'apt-get autoremove' to remove it. The following extra packages will be installed: apparmor-easyprof bsdmainutils dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libcroco3 libexpat1 libglib2.0-0 libgsl0ldbl libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libltdl7 libmagic1 libmpdec2 libopenmpi1.6 libpci-dev libpci3 libpipeline1 libpython3-stdlib libpython3.4-minimal libpython3.4-stdlib libtorque2 libunistring0 libxml2 libxml2-dev man-db mime-support openmpi-common po-debconf python3 python3-minimal python3.4 python3.4-minimal zlib1g-dev Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html libhwloc-contrib-plugins pkg-config less www-browser libmail-box-perl python3-doc python3-tk python3.4-doc binfmt-support Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info libhwloc-plugins xml-core libmail-sendmail-perl The following NEW packages will be installed: apparmor-easyprof bsdmainutils debhelper dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libcroco3 libexpat1 libglib2.0-0 libgsl0-dev libgsl0ldbl libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libltdl7 libmagic1 libmpdec2 libopenmpi-dev libopenmpi1.6 libpci-dev libpci3 libpipeline1 libpython3-stdlib libpython3.4-minimal libpython3.4-stdlib libtorque2 libunistring0 libxml2 libxml2-dev man-db mime-support openmpi-common po-debconf python3 python3-minimal python3.4 python3.4-minimal zlib1g-dev 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 14.9 MB of archives. After this operation, 72.1 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 ppc64el 2.1.0-4ubuntu1 [79.5 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libmagic1 ppc64el 1:5.14-2ubuntu2 [194 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf0c2 ppc64el 0.18.3.1-1ubuntu2 [6748 B] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 ppc64el 2.39.90-0ubuntu1 [985 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main libpci3 ppc64el 1:3.2.1-1ubuntu2 [22.7 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 ppc64el 1.2.6-2 [22.6 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main libxml2 ppc64el 2.9.1+dfsg1-3ubuntu4 [601 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main groff-base ppc64el 1.22.2-5 [1249 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main bsdmainutils ppc64el 9.0.5ubuntu1 [173 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main man-db ppc64el 2.6.6-1 [847 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libcroco3 ppc64el 0.6.8-2ubuntu1 [75.4 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libltdl7 ppc64el 2.4.2-1.7ubuntu1 [33.9 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main libmpdec2 ppc64el 2.4.0-6 [83.9 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.4-minimal ppc64el 3.4~rc2-1 [440 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.4-stdlib ppc64el 3.4~rc2-1 [1974 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libunistring0 ppc64el 0.9.3-5ubuntu3 [262 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main python3.4-minimal ppc64el 3.4~rc2-1 [1145 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/universe libhwloc5 ppc64el 1.8-1ubuntu1 [62.9 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main python3.4 ppc64el 3.4~rc2-1 [160 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main python3-minimal ppc64el 3.4~rc1-1 [23.4 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libpython3-stdlib ppc64el 3.4~rc1-1 [6976 B] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main python3 ppc64el 3.4~rc1-1 [8654 B] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main dh-python all 1.20140128-1ubuntu2 [51.0 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main file ppc64el 1:5.14-2ubuntu2 [19.2 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main gettext-base ppc64el 0.18.3.1-1ubuntu2 [47.2 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main gettext ppc64el 0.18.3.1-1ubuntu2 [840 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main apparmor-easyprof all 2.8.0-0ubuntu38 [20.1 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main dh-apparmor all 2.8.0-0ubuntu38 [7286 B] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20131227ubuntu1 [604 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main libgsl0ldbl ppc64el 1.16+dfsg-1ubuntu1 [802 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main libgsl0-dev ppc64el 1.16+dfsg-1ubuntu1 [963 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main zlib1g-dev ppc64el 1:1.2.8.dfsg-1ubuntu1 [166 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main libpci-dev ppc64el 1:3.2.1-1ubuntu2 [40.7 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/universe libtorque2 ppc64el 2.4.16+dfsg-1.3ubuntu1 [72.0 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main libxml2-dev ppc64el 2.9.1+dfsg1-3ubuntu4 [694 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/universe openmpi-common all 1.6.5-8 [101 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/universe libhwloc-dev ppc64el 1.8-1ubuntu1 [121 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main libibverbs1 ppc64el 1.1.7-1ubuntu1 [22.2 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libibverbs-dev ppc64el 1.1.7-1ubuntu1 [68.5 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/universe libopenmpi1.6 ppc64el 1.6.5-8 [1193 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/universe libopenmpi-dev ppc64el 1.6.5-8 [380 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.9 MB in 16s (918 kB/s) Selecting previously unselected package libexpat1:ppc64el. (Reading database ... 11645 files and directories currently installed.) Preparing to unpack .../libexpat1_2.1.0-4ubuntu1_ppc64el.deb ... Unpacking libexpat1:ppc64el (2.1.0-4ubuntu1) ... Selecting previously unselected package libmagic1:ppc64el. Preparing to unpack .../libmagic1_1%3a5.14-2ubuntu2_ppc64el.deb ... Unpacking libmagic1:ppc64el (1:5.14-2ubuntu2) ... Selecting previously unselected package libasprintf0c2:ppc64el. Preparing to unpack .../libasprintf0c2_0.18.3.1-1ubuntu2_ppc64el.deb ... Unpacking libasprintf0c2:ppc64el (0.18.3.1-1ubuntu2) ... Selecting previously unselected package libglib2.0-0:ppc64el. Preparing to unpack .../libglib2.0-0_2.39.90-0ubuntu1_ppc64el.deb ... Unpacking libglib2.0-0:ppc64el (2.39.90-0ubuntu1) ... Selecting previously unselected package libpci3:ppc64el. Preparing to unpack .../libpci3_1%3a3.2.1-1ubuntu2_ppc64el.deb ... Unpacking libpci3:ppc64el (1:3.2.1-1ubuntu2) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../libpipeline1_1.2.6-2_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.2.6-2) ... Selecting previously unselected package libxml2:ppc64el. Preparing to unpack .../libxml2_2.9.1+dfsg1-3ubuntu4_ppc64el.deb ... Unpacking libxml2:ppc64el (2.9.1+dfsg1-3ubuntu4) ... Selecting previously unselected package groff-base. Preparing to unpack .../groff-base_1.22.2-5_ppc64el.deb ... Unpacking groff-base (1.22.2-5) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../bsdmainutils_9.0.5ubuntu1_ppc64el.deb ... Unpacking bsdmainutils (9.0.5ubuntu1) ... Selecting previously unselected package man-db. Preparing to unpack .../man-db_2.6.6-1_ppc64el.deb ... Unpacking man-db (2.6.6-1) ... Selecting previously unselected package libcroco3:ppc64el. Preparing to unpack .../libcroco3_0.6.8-2ubuntu1_ppc64el.deb ... Unpacking libcroco3:ppc64el (0.6.8-2ubuntu1) ... Selecting previously unselected package libltdl7:ppc64el. Preparing to unpack .../libltdl7_2.4.2-1.7ubuntu1_ppc64el.deb ... Unpacking libltdl7:ppc64el (2.4.2-1.7ubuntu1) ... Selecting previously unselected package libmpdec2:ppc64el. Preparing to unpack .../libmpdec2_2.4.0-6_ppc64el.deb ... Unpacking libmpdec2:ppc64el (2.4.0-6) ... Selecting previously unselected package libpython3.4-minimal:ppc64el. Preparing to unpack .../libpython3.4-minimal_3.4~rc2-1_ppc64el.deb ... Unpacking libpython3.4-minimal:ppc64el (3.4~rc2-1) ... Selecting previously unselected package mime-support. Preparing to unpack .../mime-support_3.54ubuntu1_all.deb ... Unpacking mime-support (3.54ubuntu1) ... Selecting previously unselected package libpython3.4-stdlib:ppc64el. Preparing to unpack .../libpython3.4-stdlib_3.4~rc2-1_ppc64el.deb ... Unpacking libpython3.4-stdlib:ppc64el (3.4~rc2-1) ... Selecting previously unselected package libunistring0:ppc64el. Preparing to unpack .../libunistring0_0.9.3-5ubuntu3_ppc64el.deb ... Unpacking libunistring0:ppc64el (0.9.3-5ubuntu3) ... Selecting previously unselected package python3.4-minimal. Preparing to unpack .../python3.4-minimal_3.4~rc2-1_ppc64el.deb ... Unpacking python3.4-minimal (3.4~rc2-1) ... Selecting previously unselected package libhwloc5:ppc64el. Preparing to unpack .../libhwloc5_1.8-1ubuntu1_ppc64el.deb ... Unpacking libhwloc5:ppc64el (1.8-1ubuntu1) ... Selecting previously unselected package python3.4. Preparing to unpack .../python3.4_3.4~rc2-1_ppc64el.deb ... Unpacking python3.4 (3.4~rc2-1) ... Selecting previously unselected package python3-minimal. Preparing to unpack .../python3-minimal_3.4~rc1-1_ppc64el.deb ... Unpacking python3-minimal (3.4~rc1-1) ... Selecting previously unselected package libpython3-stdlib:ppc64el. Preparing to unpack .../libpython3-stdlib_3.4~rc1-1_ppc64el.deb ... Unpacking libpython3-stdlib:ppc64el (3.4~rc1-1) ... Selecting previously unselected package python3. Preparing to unpack .../python3_3.4~rc1-1_ppc64el.deb ... Unpacking python3 (3.4~rc1-1) ... Selecting previously unselected package dh-python. Preparing to unpack .../dh-python_1.20140128-1ubuntu2_all.deb ... Unpacking dh-python (1.20140128-1ubuntu2) ... Selecting previously unselected package file. Preparing to unpack .../file_1%3a5.14-2ubuntu2_ppc64el.deb ... Unpacking file (1:5.14-2ubuntu2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../gettext-base_0.18.3.1-1ubuntu2_ppc64el.deb ... Unpacking gettext-base (0.18.3.1-1ubuntu2) ... Selecting previously unselected package gettext. Preparing to unpack .../gettext_0.18.3.1-1ubuntu2_ppc64el.deb ... Unpacking gettext (0.18.3.1-1ubuntu2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../intltool-debian_0.35.0+20060710.1_all.deb ... Unpacking intltool-debian (0.35.0+20060710.1) ... Selecting previously unselected package po-debconf. Preparing to unpack .../po-debconf_1.0.16+nmu2ubuntu1_all.deb ... Unpacking po-debconf (1.0.16+nmu2ubuntu1) ... Selecting previously unselected package apparmor-easyprof. Preparing to unpack .../apparmor-easyprof_2.8.0-0ubuntu38_all.deb ... Unpacking apparmor-easyprof (2.8.0-0ubuntu38) ... Selecting previously unselected package dh-apparmor. Preparing to unpack .../dh-apparmor_2.8.0-0ubuntu38_all.deb ... Unpacking dh-apparmor (2.8.0-0ubuntu38) ... Selecting previously unselected package debhelper. Preparing to unpack .../debhelper_9.20131227ubuntu1_all.deb ... Unpacking debhelper (9.20131227ubuntu1) ... Selecting previously unselected package libgsl0ldbl. Preparing to unpack .../libgsl0ldbl_1.16+dfsg-1ubuntu1_ppc64el.deb ... Unpacking libgsl0ldbl (1.16+dfsg-1ubuntu1) ... Selecting previously unselected package libgsl0-dev. Preparing to unpack .../libgsl0-dev_1.16+dfsg-1ubuntu1_ppc64el.deb ... Unpacking libgsl0-dev (1.16+dfsg-1ubuntu1) ... Selecting previously unselected package zlib1g-dev:ppc64el. Preparing to unpack .../zlib1g-dev_1%3a1.2.8.dfsg-1ubuntu1_ppc64el.deb ... Unpacking zlib1g-dev:ppc64el (1:1.2.8.dfsg-1ubuntu1) ... Selecting previously unselected package libpci-dev. Preparing to unpack .../libpci-dev_1%3a3.2.1-1ubuntu2_ppc64el.deb ... Unpacking libpci-dev (1:3.2.1-1ubuntu2) ... Selecting previously unselected package libtorque2. Preparing to unpack .../libtorque2_2.4.16+dfsg-1.3ubuntu1_ppc64el.deb ... Unpacking libtorque2 (2.4.16+dfsg-1.3ubuntu1) ... Selecting previously unselected package libxml2-dev:ppc64el. Preparing to unpack .../libxml2-dev_2.9.1+dfsg1-3ubuntu4_ppc64el.deb ... Unpacking libxml2-dev:ppc64el (2.9.1+dfsg1-3ubuntu4) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../openmpi-common_1.6.5-8_all.deb ... Unpacking openmpi-common (1.6.5-8) ... Selecting previously unselected package libhwloc-dev:ppc64el. Preparing to unpack .../libhwloc-dev_1.8-1ubuntu1_ppc64el.deb ... Unpacking libhwloc-dev:ppc64el (1.8-1ubuntu1) ... Selecting previously unselected package libibverbs1. Preparing to unpack .../libibverbs1_1.1.7-1ubuntu1_ppc64el.deb ... Unpacking libibverbs1 (1.1.7-1ubuntu1) ... Selecting previously unselected package libibverbs-dev. Preparing to unpack .../libibverbs-dev_1.1.7-1ubuntu1_ppc64el.deb ... Unpacking libibverbs-dev (1.1.7-1ubuntu1) ... Selecting previously unselected package libopenmpi1.6. Preparing to unpack .../libopenmpi1.6_1.6.5-8_ppc64el.deb ... Unpacking libopenmpi1.6 (1.6.5-8) ... Selecting previously unselected package libopenmpi-dev. Preparing to unpack .../libopenmpi-dev_1.6.5-8_ppc64el.deb ... Unpacking libopenmpi-dev (1.6.5-8) ... Setting up libexpat1:ppc64el (2.1.0-4ubuntu1) ... Setting up libmagic1:ppc64el (1:5.14-2ubuntu2) ... Setting up libasprintf0c2:ppc64el (0.18.3.1-1ubuntu2) ... Setting up libglib2.0-0:ppc64el (2.39.90-0ubuntu1) ... No schema files found: doing nothing. Setting up libpci3:ppc64el (1:3.2.1-1ubuntu2) ... Setting up libpipeline1:ppc64el (1.2.6-2) ... Setting up libxml2:ppc64el (2.9.1+dfsg1-3ubuntu4) ... Setting up groff-base (1.22.2-5) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.6-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcroco3:ppc64el (0.6.8-2ubuntu1) ... Setting up libltdl7:ppc64el (2.4.2-1.7ubuntu1) ... Setting up libmpdec2:ppc64el (2.4.0-6) ... Setting up libpython3.4-minimal:ppc64el (3.4~rc2-1) ... Setting up mime-support (3.54ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up libpython3.4-stdlib:ppc64el (3.4~rc2-1) ... Setting up libunistring0:ppc64el (0.9.3-5ubuntu3) ... Setting up python3.4-minimal (3.4~rc2-1) ... Setting up libhwloc5:ppc64el (1.8-1ubuntu1) ... Setting up python3.4 (3.4~rc2-1) ... Setting up python3-minimal (3.4~rc1-1) ... Setting up libpython3-stdlib:ppc64el (3.4~rc1-1) ... Setting up file (1:5.14-2ubuntu2) ... Setting up gettext-base (0.18.3.1-1ubuntu2) ... Setting up gettext (0.18.3.1-1ubuntu2) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up libgsl0ldbl (1.16+dfsg-1ubuntu1) ... Setting up libgsl0-dev (1.16+dfsg-1ubuntu1) ... Setting up zlib1g-dev:ppc64el (1:1.2.8.dfsg-1ubuntu1) ... Setting up libpci-dev (1:3.2.1-1ubuntu2) ... Setting up libtorque2 (2.4.16+dfsg-1.3ubuntu1) ... Setting up libxml2-dev:ppc64el (2.9.1+dfsg1-3ubuntu4) ... Setting up openmpi-common (1.6.5-8) ... Setting up libhwloc-dev:ppc64el (1.8-1ubuntu1) ... Setting up libibverbs1 (1.1.7-1ubuntu1) ... Setting up libibverbs-dev (1.1.7-1ubuntu1) ... Setting up libopenmpi1.6 (1.6.5-8) ... Setting up libopenmpi-dev (1.6.5-8) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up python3 (3.4~rc1-1) ... running python rtupdate hooks for python3.4... running python post-rtupdate hooks for python3.4... Exception ignored in: > Traceback (most recent call last): File "/usr/lib/python3.4/subprocess.py", line 897, in __del__ TypeError: 'NoneType' object is not callable Setting up dh-python (1.20140128-1ubuntu2) ... Setting up apparmor-easyprof (2.8.0-0ubuntu38) ... Setting up dh-apparmor (2.8.0-0ubuntu38) ... Setting up debhelper (9.20131227ubuntu1) ... Processing triggers for libc-bin (2.19-0ubuntu2) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.19-0ubuntu2 make_3.81-8.2ubuntu3 dpkg-dev_1.17.5ubuntu4 gcc-4.8_4.8.2-16ubuntu4 g++-4.8_4.8.2-16ubuntu4 binutils_2.24-2ubuntu3 libstdc++-4.8-dev_4.8.2-16ubuntu4 libstdc++6_4.8.2-16ubuntu4 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Quilt gpgv: Signature made Tue Feb 25 08:03:44 2014 UTC using RSA key ID D1C646D1 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./ampliconnoise_1.29-2.dsc dpkg-source: info: extracting ampliconnoise in ampliconnoise-1.29 dpkg-source: info: unpacking ampliconnoise_1.29.orig.tar.gz dpkg-source: info: unpacking ampliconnoise_1.29-2.debian.tar.xz dpkg-source: info: applying fix-path-for-data.patch dpkg-source: info: applying fix-segfault-on-non-fasta-input.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying clang-ftbfs.patch dpkg-buildpackage: source package ampliconnoise dpkg-buildpackage: source version 1.29-2 dpkg-buildpackage: source distribution unstable dpkg-source --before-build ampliconnoise-1.29 dpkg-buildpackage: host architecture ppc64el /usr/bin/fakeroot debian/rules clean dh clean dh_testdir dh_auto_clean make[1]: Entering directory `/build/buildd/ampliconnoise-1.29' (cd FCluster && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/FCluster' rm -rf *o FCluster make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/FCluster' (cd FastaUnique && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/FastaUnique' rm -rf *.o FastaUnique make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/FastaUnique' (cd NDist && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/NDist' rm -rf *.o NDist make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/NDist' (cd PyroDist && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PyroDist' rm -rf *.o PyroDist make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PyroDist' (cd PyroNoise && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PyroNoise' rm -rf *.o PyroNoise make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PyroNoise' (cd PyroNoiseM && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PyroNoiseM' rm -rf *.o PyroNoiseM make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PyroNoiseM' (cd PyroNoiseA && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PyroNoiseA' rm -rf *.o PyroNoiseA make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PyroNoiseA' (cd SeqDist && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/SeqDist' rm -rf *.o SeqDist make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/SeqDist' (cd SeqNoise && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/SeqNoise' rm -rf *.o SeqNoise make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/SeqNoise' (cd SplitClusterEven && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/SplitClusterEven' rm -rf *.o SplitClusterEven make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/SplitClusterEven' (cd SplitClusterClust && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/SplitClusterClust' rm -rf *.o SplitClusterClust make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/SplitClusterClust' (cd Perseus && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/Perseus' rm -rf *.o Perseus make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/Perseus' (cd PerseusD && make clean) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PerseusD' rm -rf *.o PerseusD make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PerseusD' (cd bin && rm -rf *) make[1]: Leaving directory `/build/buildd/ampliconnoise-1.29' debian/rules override_dh_clean make[1]: Entering directory `/build/buildd/ampliconnoise-1.29' dh_clean rm -f *.o rm -f *.1 make[1]: Leaving directory `/build/buildd/ampliconnoise-1.29' debian/rules build-arch dh build-arch dh_testdir -a dh_auto_configure -a dh_auto_build -a make[1]: Entering directory `/build/buildd/ampliconnoise-1.29' (cd FCluster && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/FCluster' cc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c FCluster.c FCluster.c: In function 'readDistanceMatrix': FCluster.c:356:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ FCluster.c:390:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ FCluster.c:420:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ linking... cc -Wl,-Bsymbolic-functions -Wl,-z,relro -o FCluster FCluster.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/FCluster' (cd FastaUnique && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/FastaUnique' cc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c FastaUnique.c linking... cc -Wl,-Bsymbolic-functions -Wl,-z,relro -o FastaUnique FastaUnique.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/FastaUnique' (cd NDist && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/NDist' mpicc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c NDist.c linking... mpicc -Wl,-Bsymbolic-functions -Wl,-z,relro -o NDist NDist.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/NDist' (cd PyroDist && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PyroDist' mpicc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c PyroDist.c PyroDist.c: In function 'readData': PyroDist.c:403:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroDist.c:433:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroDist.c: In function 'initLookUp': PyroDist.c:816:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroDist.c:825:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ linking... mpicc -Wl,-Bsymbolic-functions -Wl,-z,relro -o PyroDist PyroDist.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PyroDist' (cd PyroNoise && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PyroNoise' mpicc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c PyroNoise.c PyroNoise.c: In function 'writeCentroids': PyroNoise.c:2073:5: warning: too many arguments for format [-Wformat-extra-args] fprintf(stderr, "Can't open szCenFile for writing\n",szCenFile); ^ PyroNoise.c: In function 'readData': PyroNoise.c:549:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoise.c:579:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoise.c: In function 'initLookUp': PyroNoise.c:963:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoise.c:972:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ linking... mpicc -Wl,-Bsymbolic-functions -Wl,-z,relro -o PyroNoise PyroNoise.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PyroNoise' (cd SeqDist && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/SeqDist' mpicc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c SeqDist.c SeqDist.c: In function 'initLookUp': SeqDist.c:887:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ linking... mpicc -Wl,-Bsymbolic-functions -Wl,-z,relro -o SeqDist SeqDist.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/SeqDist' (cd PyroNoiseM && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PyroNoiseM' mpicc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c PyroNoiseM.c PyroNoiseM.c: In function 'writeCentroids': PyroNoiseM.c:2139:5: warning: too many arguments for format [-Wformat-extra-args] fprintf(stderr, "Can't open szCenFile for writing\n",szCenFile); ^ PyroNoiseM.c: In function 'readData': PyroNoiseM.c:602:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoiseM.c:632:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoiseM.c: In function 'initLookUp': PyroNoiseM.c:1029:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoiseM.c:1038:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ linking... mpicc -Wl,-Bsymbolic-functions -Wl,-z,relro -o PyroNoiseM PyroNoiseM.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PyroNoiseM' (cd PyroNoiseA && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PyroNoiseA' mpicc -O3 -c PyroNoiseA.c PyroNoiseA.c: In function 'writeCentroids': PyroNoiseA.c:2169:5: warning: too many arguments for format [-Wformat-extra-args] fprintf(stderr, "Can't open szCenFile for writing\n",szCenFile); ^ PyroNoiseA.c: In function 'readData': PyroNoiseA.c:601:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoiseA.c:662:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoiseA.c: In function 'initLookUp': PyroNoiseA.c:1059:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PyroNoiseA.c:1068:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ linking... mpicc -o PyroNoiseA PyroNoiseA.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PyroNoiseA' (cd SeqNoise && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/SeqNoise' mpicc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c SeqNoise.c SeqNoise.c: In function 'main': SeqNoise.c:120:5: warning: too many arguments for format [-Wformat-extra-args] if(bVerbose){printf("%d: Broadcast distance matrix\n", rank, nSize, nPacket); fflush(stdout);} ^ SeqNoise.c: In function 'initLookUp': SeqNoise.c:2129:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ SeqNoise.c: In function 'outputMapping': SeqNoise.c:2365:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine,BIG_LINE_LENGTH,ifp); ^ SeqNoise.c: In function 'readDistanceMatrix': SeqNoise.c:2453:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ SeqNoise.c:2478:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ linking... mpicc -Wl,-Bsymbolic-functions -Wl,-z,relro -o SeqNoise SeqNoise.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/SeqNoise' (cd SplitClusterEven && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/SplitClusterEven' cc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c SplitClusterEven.c SplitClusterEven.c: In function 'readMapFile': SplitClusterEven.c:681:3: warning: too many arguments for format [-Wformat-extra-args] fprintf(stderr, "Failed to open map file\n", szMapFile); ^ SplitClusterEven.c: In function 'readData': SplitClusterEven.c:501:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ SplitClusterEven.c:523:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ SplitClusterEven.c: In function 'readMapFile': SplitClusterEven.c:647:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, BIG_LINE_LENGTH, ifp); ^ linking... cc -Wl,-Bsymbolic-functions -Wl,-z,relro -o SplitClusterEven SplitClusterEven.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/SplitClusterEven' (cd SplitClusterClust && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/SplitClusterClust' gcc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c SplitClusterClust.c SplitClusterClust.c: In function 'readMapFile': SplitClusterClust.c:316:3: warning: too many arguments for format [-Wformat-extra-args] fprintf(stderr, "Failed to open map file\n", szMapFile); ^ SplitClusterClust.c: In function 'readData': SplitClusterClust.c:188:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ SplitClusterClust.c:210:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ SplitClusterClust.c: In function 'readMapFile': SplitClusterClust.c:282:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, BIG_LINE_LENGTH, ifp); ^ linking... gcc -Wl,-Bsymbolic-functions -Wl,-z,relro -o SplitClusterClust SplitClusterClust.o -lm make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/SplitClusterClust' (cd Perseus && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/Perseus' cc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c Perseus.c Perseus.c: In function 'initLookUp': Perseus.c:1243:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ Perseus.c: In function 'calcLoonIndex': Perseus.c:1634:9: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result] system(szCommand); ^ linking... cc -Wl,-Bsymbolic-functions -Wl,-z,relro -o Perseus Perseus.o -lm -lgsl -lgslcblas make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/Perseus' (cd PerseusD && CFLAGS="-g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make) make[2]: Entering directory `/build/buildd/ampliconnoise-1.29/PerseusD' cc -g -O3 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O3 -c PerseusD.c PerseusD.c: In function 'initLookUp': PerseusD.c:1295:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(szLine, MAX_LINE_LENGTH, ifp); ^ PerseusD.c: In function 'calcLoonIndex': PerseusD.c:1645:9: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result] system(szCommand); ^ linking... cc -Wl,-Bsymbolic-functions -Wl,-z,relro -o PerseusD PerseusD.o -lm -lgsl -lgslcblas make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29/PerseusD' make[1]: Leaving directory `/build/buildd/ampliconnoise-1.29' dh_auto_test -a /usr/bin/fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory `/build/buildd/ampliconnoise-1.29' make install make[2]: Entering directory `/build/buildd/ampliconnoise-1.29' cp FCluster/FCluster bin cp FastaUnique/FastaUnique bin cp NDist/NDist bin cp PyroDist/PyroDist bin cp PyroNoise/PyroNoise bin cp PyroNoiseM/PyroNoiseM bin cp PyroNoiseA/PyroNoiseA bin cp SeqDist/SeqDist bin cp SeqNoise/SeqNoise bin cp SplitClusterEven/SplitClusterEven bin cp SplitClusterClust/SplitClusterClust bin cp Perseus/Perseus bin cp PerseusD/PerseusD bin make[2]: Leaving directory `/build/buildd/ampliconnoise-1.29' dh_install bin/* /usr/bin dh_install Data/* /usr/share/ampliconnoise/Data/ dh_install Scripts/* /usr/share/ampliconnoise/Scripts/ make[1]: Leaving directory `/build/buildd/ampliconnoise-1.29' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installman make[1]: Entering directory `/build/buildd/ampliconnoise-1.29' debian/ampliconnoise.pod pod2man -c AmpliconNoise Documentation debian/ampliconnoise.pod > ampliconnoise.1 dh_installman ampliconnoise.1 ( for f in bin/* ; do \ ln -s ampliconnoise.1 debian/ampliconnoise/usr/share/man/man1/`basename "$f"`.1 ; \ done ) make[1]: Leaving directory `/build/buildd/ampliconnoise-1.29' dh_perl -a dh_link -a debian/rules override_dh_compress make[1]: Entering directory `/build/buildd/ampliconnoise-1.29' dh_compress --exclude=.pdf make[1]: Leaving directory `/build/buildd/ampliconnoise-1.29' dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: not enabling -a because /CurrentlyBuilding exists dh_strip debug symbol extraction: all non-arch-all packages for this build platform ppc64el: ampliconnoise dh_strip debug symbol extraction: packages to act on: ampliconnoise dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe /usr/bin/pkg_create_dbgsym: building ddeb package dpkg-deb: building package `ampliconnoise-dbgsym' in `../ampliconnoise-dbgsym_1.29-2_ppc64el.ddeb'. dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ampliconnoise/usr/bin/SeqNoise debian/ampliconnoise/usr/bin/PyroNoise debian/ampliconnoise/usr/bin/SeqDist debian/ampliconnoise/usr/bin/PyroDist debian/ampliconnoise/usr/bin/NDist debian/ampliconnoise/usr/bin/PyroNoiseA debian/ampliconnoise/usr/bin/PyroNoiseM were not linked against libpthread.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ampliconnoise/usr/bin/Perseus debian/ampliconnoise/usr/bin/PerseusD were not linked against libgslcblas.so.0 (they use none of the library's symbols) dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package ampliconnoise: unused substitution variable ${perl:Depends} dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 119 pkgstriptranslations: processing ampliconnoise (in debian/ampliconnoise); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/ampliconnoise/DEBIAN/control, package ampliconnoise, directory debian/ampliconnoise pkgstripfiles: Truncating usr/share/doc/ampliconnoise/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package ampliconnoise took 0 s dpkg-deb: warning: 'debian/ampliconnoise/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `ampliconnoise' in `../ampliconnoise_1.29-2_ppc64el.deb'. dpkg-genchanges -B -mUbuntu Build Daemon >../ampliconnoise_1.29-2_ppc64el.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build ampliconnoise-1.29 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20140228-0709 Publishing debug debs. chroot-autobuild/build/buildd/ampliconnoise_1.29-2_ppc64el.deb: new debian package, version 2.0. size 458938 bytes: control archive=2658 bytes. 983 bytes, 23 lines control 4898 bytes, 67 lines md5sums Package: ampliconnoise Version: 1.29-2 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1374 Depends: libc6 (>= 2.17), libgsl0ldbl (>= 1.9), libopenmpi1.6, mafft Recommends: openmpi-bin Section: science Priority: optional Homepage: http://code.google.com/p/ampliconnoise/ Description: removal of noise from 454 sequenced PCR amplicons AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts: . Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences . Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct. chroot-autobuild/build/buildd/ampliconnoise_1.29-2_ppc64el.deb: drwxr-xr-x root/root 0 2014-02-28 07:09 ./ drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/ drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/bin/ -rwxr-xr-x root/root 71712 2014-02-28 07:09 ./usr/bin/PyroNoiseA -rwxr-xr-x root/root 67736 2014-02-28 07:09 ./usr/bin/PyroNoise -rwxr-xr-x root/root 14360 2014-02-28 07:09 ./usr/bin/FastaUnique -rwxr-xr-x root/root 26632 2014-02-28 07:09 ./usr/bin/FCluster -rwxr-xr-x root/root 22568 2014-02-28 07:09 ./usr/bin/SeqDist -rwxr-xr-x root/root 71840 2014-02-28 07:09 ./usr/bin/PyroNoiseM -rwxr-xr-x root/root 22600 2014-02-28 07:09 ./usr/bin/PyroDist -rwxr-xr-x root/root 22528 2014-02-28 07:09 ./usr/bin/SplitClusterEven -rwxr-xr-x root/root 39016 2014-02-28 07:09 ./usr/bin/PerseusD -rwxr-xr-x root/root 14320 2014-02-28 07:09 ./usr/bin/SplitClusterClust -rwxr-xr-x root/root 18488 2014-02-28 07:09 ./usr/bin/NDist -rwxr-xr-x root/root 38968 2014-02-28 07:09 ./usr/bin/Perseus -rwxr-xr-x root/root 51304 2014-02-28 07:09 ./usr/bin/SeqNoise drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/ drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/man/ drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/man/man1/ -rw-r--r-- root/root 2829 2014-02-28 07:09 ./usr/share/man/man1/ampliconnoise.1.gz drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/ampliconnoise/ drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/ampliconnoise/Data/ -rw-r--r-- root/root 156 2013-08-01 10:37 ./usr/share/ampliconnoise/Data/Tran_D.dat -rw-r--r-- root/root 140066 2013-08-01 10:37 ./usr/share/ampliconnoise/Data/LookUp.dat -rw-r--r-- root/root 140432 2013-08-01 10:37 ./usr/share/ampliconnoise/Data/LookUp_E123.dat -rw-r--r-- root/root 156 2013-08-01 10:37 ./usr/share/ampliconnoise/Data/Tran.dat -rw-r--r-- root/root 44 2013-08-01 10:37 ./usr/share/ampliconnoise/Data/TranN.dat -rw-r--r-- root/root 150 2013-08-01 10:37 ./usr/share/ampliconnoise/Data/Tran_V6.dat -rw-r--r-- root/root 140348 2013-08-01 10:37 ./usr/share/ampliconnoise/Data/LookUp_Titanium.dat drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/ampliconnoise/Scripts/ -rwxr-xr-x root/root 11195 2013-08-01 10:40 ./usr/share/ampliconnoise/Scripts/RunFLX.sh -rwxr-xr-x root/root 789 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Map.pl -rwxr-xr-x root/root 2460 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/CleanBothM.pl -rwxr-xr-x root/root 11259 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/RunTitaniumA.sh -rwxr-xr-x root/root 1335 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Diversity.pl -rwxr-xr-x root/root 268 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/CountFasta.pl -rwxr-xr-x root/root 133 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/CleanMinMax.sh -rwxr-xr-x root/root 896 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/FilterGoodClass.pl -rwxr-xr-x root/root 2772 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Qiime_OTU.pl -rwxr-xr-x root/root 14461 2013-08-01 10:40 ./usr/share/ampliconnoise/Scripts/RunTitaniumFast.sh -rwxr-xr-x root/root 2468 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/CleanMinMax.pl -rwxr-xr-x root/root 185 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/CountSequences.pl -rwxr-xr-x root/root 13951 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/RunTitaniumWeb.sh -rwxr-xr-x root/root 3008 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/FlowsFA360.pl -rwxr-xr-x root/root 1747 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Typical.pl -rwxr-xr-x root/root 687 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/ParseBoth.pl -rwxr-xr-x root/root 751 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/ConvertDatFasta.pl -rwxr-xr-x root/root 538 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Sub.pl -rwxr-xr-x root/root 645 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Class.pl -rwxr-xr-x root/root 11534 2013-08-01 10:54 ./usr/share/ampliconnoise/Scripts/RunBothFLX.sh -rwxr-xr-x root/root 130 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Clean.sh -rwxr-xr-x root/root 3001 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/FlowsFA.pl -rwxr-xr-x root/root 2839 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/SplitKeysFlower.pl -rwxr-xr-x root/root 699 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/SubsampleDat.pl -rwxr-xr-x root/root 671 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Parse.pl -rwxr-xr-x root/root 1954 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Clean360.pl -rwxr-xr-x root/root 495 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Join.pl -rwxr-xr-x root/root 3117 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/FlowsMinMax.pl -rwxr-xr-x root/root 1901 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Qiime.pl -rwxr-xr-x root/root 225 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Truncate.pl -rwxr-xr-x root/root 967 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Split.pl -rwxr-xr-x root/root 11538 2013-08-01 10:50 ./usr/share/ampliconnoise/Scripts/RunBoth.sh -rwxr-xr-x root/root 11259 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/RunTitanium.sh -rwxr-xr-x root/root 3580 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/SplitKeys.pl -rwxr-xr-x root/root 1726 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/CSV.pl -rwxr-xr-x root/root 1746 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Qiime_Typical.pl -rwxr-xr-x root/root 3440 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/SplitKeysBoth.pl -rwxr-xr-x root/root 320 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/Subsample.sh -rwxr-xr-x root/root 374 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/MedianS.sh -rwxr-xr-x root/root 2554 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/CleanBoth.pl -rwxr-xr-x root/root 2604 2013-08-01 10:37 ./usr/share/ampliconnoise/Scripts/CleanAcyclic.pl drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/doc-base/ -rw-r--r-- root/root 808 2013-09-12 04:57 ./usr/share/doc-base/ampliconnoise drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/doc/ drwxr-xr-x root/root 0 2014-02-28 07:09 ./usr/share/doc/ampliconnoise/ -rw-r--r-- root/root 306514 2013-08-01 10:53 ./usr/share/doc/ampliconnoise/Doc.pdf -rw-r--r-- root/root 1411 2013-09-12 04:57 ./usr/share/doc/ampliconnoise/copyright -rw-r--r-- root/root 1326 2014-02-28 07:09 ./usr/share/doc/ampliconnoise/changelog.Debian.gz -rw-r--r-- root/root 353 2013-09-12 04:57 ./usr/share/doc/ampliconnoise/README.Debian lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/NDist.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/SplitClusterEven.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/FCluster.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/SeqNoise.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/FastaUnique.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/PyroDist.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/SplitClusterClust.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/PerseusD.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/PyroNoise.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/PyroNoiseM.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/SeqDist.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/PyroNoiseA.1.gz -> ampliconnoise.1.gz lrwxrwxrwx root/root 0 2014-02-28 07:09 ./usr/share/man/man1/Perseus.1.gz -> ampliconnoise.1.gz ampliconnoise_1.29-2_ppc64el.changes: Format: 1.8 Date: Tue, 25 Feb 2014 08:57:09 +0100 Source: ampliconnoise Binary: ampliconnoise Architecture: ppc64el Version: 1.29-2 Distribution: trusty-proposed Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: Andreas Tille Description: ampliconnoise - removal of noise from 454 sequenced PCR amplicons Closes: 740029 Changes: ampliconnoise (1.29-2) unstable; urgency=low . [ Arthur Marble ] * Fix the FTBFS with clang: - Fixed the non-void function should return a value in FCluster/FCluster.c SplitClusterEven/SplitClusterEven.c Closes: #740029 . [ James McCoy ] * Moved debian/upstream to debian/upstream/metadata Checksums-Sha1: af1a100c4accf970f0ca14bc78aeef769e39c11d 458938 ampliconnoise_1.29-2_ppc64el.deb Checksums-Sha256: b7fae829f78f1d5dbd2148dcaa8de01b5512a215060c7b7f8addfe7fc2cf7198 458938 ampliconnoise_1.29-2_ppc64el.deb Files: f829a2832e2871ed553103f84252b480 458938 science optional ampliconnoise_1.29-2_ppc64el.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20140228-0709 Build needed 00:00:24, 14452k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5645902'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5645902/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5645902'] Unmounting chroot for build PACKAGEBUILD-5645902... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5645902'] Removing build PACKAGEBUILD-5645902