bali-phy 3.1.2+dfsg-1 source package in Ubuntu


bali-phy (3.1.2+dfsg-1) unstable; urgency=medium

  [ Dylan Aïssi ]
  * Team upload.
  * Add references to registries.

  [ Benjamin Redelings ]
  * New upstream version 3.1.2+dfsg
  * Stop excluding files that have been removed upstream.
  * New upstream version
  * Add quilt patch to not run external testiphy test suite.
  * Remove patches incorporated upstream.
  * Run tests with python3 instead of depending on python2.

 -- Andreas Tille <email address hidden>  Mon, 07 May 2018 15:12:50 +0200

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Uploaded by:
Debian Med on 2018-05-07
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

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Series Pocket Published Component Section


File Size SHA-256 Checksum
bali-phy_3.1.2+dfsg-1.dsc 2.2 KiB 96774ad55dc9c09604e8af7670c29f7ec11fe7cbc02112b295175cf839c8bda7
bali-phy_3.1.2+dfsg.orig.tar.xz 1.2 MiB 9412786ec928f771b92217f2c0a435150cc9f484c18d3b362917ef3d9decea31
bali-phy_3.1.2+dfsg-1.debian.tar.xz 2.9 KiB 44c29b5a5e603077dea194a43691b8fe1019b3b6d6fe0c6bd41f7aef6019a82d

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Binary packages built by this source

bali-phy: Bayesian Inference of Alignment and Phylogeny

 BAli-Phy estimates multiple sequence alignments and evolutionary trees
 from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC
 to estimate evolutionary trees, positive selection, and branch lengths
 while averaging over alternative alignments. BAli-Phy can display
 alignment ambiguity graphically in an alignment uncertainty (AU) plot.
 BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes
 and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically
 estimates relative rates for each gene.

bali-phy-dbgsym: debug symbols for bali-phy